Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0024878.1

Orthogroup ID

OG0002032

Physical Location & Seq

Genomic Coordinates Forward (+)

387 .. 7256

Gene Structure 6870 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0024878.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2043 bp

atggccgcaaacaccgcctccgtccaaccgggtcggtttcgggtcctaaagcaaggggccaaaccggtcgacccgaatccgggtcccgtggtttactggatgttcagagaccaacgggtcaaagacaactgggcgttgatccacgccgttgaagaggccaacaaggcccatgtccccgtcgccgtggccttcaatttgttcgatcaatttcttggcgccaaagcccgccatttagggtttatgctgaggggcttgcgacaattgcatcctgatcttcaagaagcgcatcagattccattttttctcgtccggggagaagcggaggagactatacccaattttatgagggagtgtggggcttcacttttggtaacagacttctcacctttaagggaggtgcagaaatgtaaagaggaaatacgcaagagggttagtgattttgtgaccatacatgaagttgatgcccacaatgtggtgcccgtttgggcggcatcggagaagttggagtatagtgctaggactataaggagtaagatcaataaaaggctgcctgagtaccttattgagtttcctacattgcagccaccgattgcaaaatgggtgggtacaagtccggcgattgattgggatggtcttattaatgaagttttaaggaaaggagcagaagttcctgaagttgactggtgcgaaccaggagaaaaggcagcaatggaagttttgaagggtagcaaaaatggattcttgacaaaaaggctgaagggttattcatcggaccggaataaccctttgaaaccaagaggggtgtctggtctttctccatatttgcattttgggcaaatatctgctcagaggtgtgccttggaggcacgcagtgtccgaaaactcagtcccctggcagtggatgcatttttagaggagttgattgtgcgcagagaacttgctgacaactactgcttttaccagcctcaatatgattcattgcaaggggcatgggaatgggcaccgataatggttatgaagtgtgtaaaatttctaaattgcaggagggagcaattggagaaggcacaaactgctgatcctctctggaatgcctcccaatgtgagatggttcattatgggaagatgcatggttttatgcagatgtattgggcaaaaaagatccttgagtggacaagaggacccgaagaagcccttgaaatatccatatatttaaataacaagtatgaaatggatggaagggatcccaatggatatgttggttgcatgtggtcaatatgtggtgttcacgaccagggttggaaggaacgaccaatttttgggaaaatacgttacatgaactatgcaggctgcaaaaggaaatttgacgtggatggatacgttgcctatgtgcagaggcttggtgcaaccaagaagagaaaactcctactcaggtcgcatgatcagtctgttttctgtagggaattggtaggctatctttggttgctgcatatcaatcatctgcaactgtggttcaggcaggcacaaacaaaagagctcacctttaaggaggagaaggccaaggtgaaagacttgcaccccgagcttctagctgggatcagcttcatgtcaatgatttctatcaatctctattgctccactgtggtagatgaagtaaatacaggttatcaagatgggtggagaaatcagggttgtaaagaaggatggtcaggaacttcaatgcaattgtacttggttctggatacagctgcagatggcactaaacaatattgtcaagaagattttgcaaagcagtgtagtgaaattcagcttgaattgcgcaaaagttcagctaatggacgaagttttttggagtcatctaaaattgctcttgatggtggaggcaaaaatggagagcccaaacagatcattggttgtatgaaagagcgtgttgtggaaattggatcatttggaattgtttttaagactggtgagactggctataaagaaggttttgcaagacagaagagaaaagaacaaggaacgtcaattgatgcgtgtgattga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000719 GO:0003674 GO:0003824 GO:0003904 GO:0003913 GO:0005488 GO:0006139 GO:0006259 GO:0006281 GO:0006290 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009650 GO:0009987 GO:0016829 GO:0016830 GO:0033554 GO:0034641 GO:0036094 GO:0043167 GO:0043168 GO:0043170 GO:0044237 GO:0044238 GO:0044260 GO:0046483 GO:0048037 GO:0050660 GO:0050662 GO:0050896 GO:0051716 GO:0071704 GO:0071949 GO:0090304 GO:0097159 GO:0140097 GO:1901265 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DNA_photolyase

Protein Analysis

680

Amino Acids

77.56

Weight (kDa)

8.67

Isoelectric Point (pI)

39.37

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002032)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12370 AT1G12370 AT1G12370
fragaria_vesca	FvH4_5g00790 FvH4_5g00790 FvH4_5g00790 FvH4_5g00790 FvH4_5g00790 FvH4_5g00790 FvH4_5g00790
malus_domestica	MD04G1078900.v1.1
prunus_persica	Prupe.5G080300_v2.0.a1 Prupe.5G080300_v2.0.a1 Prupe.5G080300_v2.0.a1 Prupe.5G080300_v2.0.a1
pyrus_communis	pycom04g07070
rosa_chinensis	RchiOBHm_Chr7g0201341 RchiOBHm_Chr7g0201371 RchiOBHm_Chr7g0201391
rosa_laevigata	RLG00000003679
rosa_multiflora	Rmu_co8093880.1_g000001 Rmu_co8322589.1_g000001 Rmu_sc0001469.1_g000010 Rmu_sc0001469.1_g000012 Rmu_sc0013971.1_g000001 Rmu_sc0013971.1_g000004 Rmu_sc0024878.1_g000001 Rmu_sc0024878.1_g000004 Rmu_sc0026181.1_g000001
rosa_roxburghii	Rroxscaffold_3G00226330 Rroxscaffold_3G00255330 Rroxscaffold_3G00255340 Rroxscaffold_3G00255350
rosa_rugosa	Rorug07G0062600 Rorug07G0062700
rosa_samantha	Rh7AG190200 Rh7BG192600 Rh7CG200900 Rh7CG201300 Rh7CG201400 Rh7CG201500 Rh7DG195000 Rh7DG195200
rosa_wichuraiana	Rw7G016680 Rw7G016690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	116
Acc16I	TGCGCA	2 cut(s)	929, 1817
AccB1I	GGYRCC	3 cut(s)	215, 475, 1000
AccB7I	CCANNNNNTGG	2 cut(s)	472, 1316
AccI	GTMKAC	1 cut(s)	69
AciI	CCGC	5 cut(s)	6, 15, 226, 320, 488
AclWI	GGATC	7 cut(s)	133, 1070, 1153, 1235, 1248, 1601, 1948
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	3 cut(s)	1028, 1358, 1800
AcuI	CTGAAG	2 cut(s)	693, 776
AcyI	GRCGYC	1 cut(s)	216
AdeI	CACNNNGTG	2 cut(s)	472, 872
AfaI	GTAC	3 cut(s)	557, 607, 1727
AfiI	CCNNNNNNNGG	5 cut(s)	79, 80, 472, 898, 1316
AgeI	ACCGGT	1 cut(s)	64
AgsI	TTSAA	8 cut(s)	152, 193, 278, 721, 790, 1196, 1716, 1811
AjiI	CACGTC	1 cut(s)	1366
AjnI	CCWGG	3 cut(s)	691, 891, 1290
AloI	GAACNNNNNNTCC	2 cut(s)	651, 683
AluBI	AGCT	7 cut(s)	1534, 1582, 1589, 1599, 1745, 1807, 1829
AluI	AGCT	7 cut(s)	1534, 1582, 1589, 1599, 1745, 1807, 1829
Alw21I	GWGCWC	1 cut(s)	1536
Alw26I	GTCTC	3 cut(s)	102, 320, 1964
AlwI	GGATC	7 cut(s)	133, 1070, 1153, 1235, 1248, 1601, 1948
Ama87I	CYCGRG	1 cut(s)	1577
AoxI	GGCC	6 cut(s)	3, 57, 156, 165, 186, 1554
ApeKI	GCWGC	6 cut(s)	547, 580, 704, 1347, 1483, 1745
ApoI	RAATTY	3 cut(s)	1028, 1358, 1800
ArsI	GACNNNNNNTTYG	2 cut(s)	871, 903
AseI	ATTAAT	1 cut(s)	639
AsiGI	ACCGGT	1 cut(s)	64
AspLEI	GCGC	4 cut(s)	218, 286, 930, 1818
AspS9I	GGNCC	6 cut(s)	43, 57, 83, 166, 772, 1178
AsuC2I	CCSGG	3 cut(s)	30, 81, 311
AsuHPI	GGTGA	4 cut(s)	375, 1528, 1573, 1979
AvaI	CYCGRG	1 cut(s)	1577
AvaII	GGWCC	4 cut(s)	43, 83, 772, 1178
BaeGI	GKGCMC	2 cut(s)	480, 1003
BamHI	GGATCC	1 cut(s)	1240
BanI	GGYRCC	3 cut(s)	215, 475, 1000
BanII	GRGCYC	2 cut(s)	1536, 1896
Bbv12I	GWGCWC	1 cut(s)	1536
BbvCI	CCTCAGC	1 cut(s)	245
BbvI	GCAGC	6 cut(s)	534, 592, 716, 1334, 1470, 1732
BccI	CCATC	8 cut(s)	623, 1099, 1226, 1364, 1664, 1695, 1745, 1865
BceAI	ACGGC	2 cut(s)	131, 167
BciT130I	CCWGG	3 cut(s)	693, 893, 1292
BciVI	GTATCC	2 cut(s)	1367, 1732
BclI	TGATCA	1 cut(s)	1438
BcnI	CCSGG	3 cut(s)	30, 81, 311
BcoDI	GTCTC	3 cut(s)	102, 320, 1964
BfaI	CTAG	2 cut(s)	516, 1586
BfmI	CTRYAG	2 cut(s)	1453, 1746
BfoI	RGCGCY	1 cut(s)	219
BfuI	GTATCC	2 cut(s)	1367, 1732
BglI	GCCNNNNNGGC	2 cut(s)	164, 863
BisI	GCNGC	8 cut(s)	6, 489, 548, 581, 705, 1348, 1484, 1746
BlsI	GCNGC	8 cut(s)	7, 490, 549, 582, 706, 1349, 1485, 1747
Bme1390I	CCNGG	6 cut(s)	30, 81, 311, 693, 893, 1292
Bme18I	GGWCC	4 cut(s)	43, 83, 772, 1178
BmeT110I	CYCGRG	1 cut(s)	1577
BmgBI	CACGTC	1 cut(s)	1366
BmgT120I	GGNCC	6 cut(s)	43, 57, 83, 166, 772, 1178
BmiI	GGNNCC	9 cut(s)	44, 58, 84, 85, 217, 477, 1002, 1180, 1242
BmrFI	CCNGG	6 cut(s)	30, 81, 311, 693, 893, 1292
BmrI	ACTGGG	1 cut(s)	139
BmsI	GCATC	7 cut(s)	274, 295, 451, 500, 892, 1113, 2020
BmuI	ACTGGG	1 cut(s)	139
Bpu10I	CCTNAGC	1 cut(s)	245
BpuEI	CTTGAG	1 cut(s)	1184
BpuMI	CCSGG	3 cut(s)	30, 81, 311
BsaBI	GATNNNNATC	1 cut(s)	1616
BsaHI	GRCGYC	1 cut(s)	216
BsaI	GGTCTC	1 cut(s)	102
BsaJI	CCNNGG	7 cut(s)	87, 183, 310, 858, 891, 1291, 1557
BsaWI	WCCGGW	2 cut(s)	64, 774
BsaXI	ACNNNNNCTCC	3 cut(s)	32, 651, 681
Bsc4I	CCNNNNNNNGG	5 cut(s)	79, 80, 472, 898, 1316
Bse118I	RCCGGY	1 cut(s)	64
Bse1I	ACTGG	5 cut(s)	101, 134, 686, 1969, 1978
Bse3DI	GCAATG	3 cut(s)	575, 714, 977
Bse8I	GATNNNNATC	1 cut(s)	1616
BseBI	CCWGG	3 cut(s)	693, 893, 1292
BseDI	CCNNGG	7 cut(s)	87, 183, 310, 858, 891, 1291, 1557
BseGI	GGATG	7 cut(s)	105, 265, 634, 907, 1237, 1375, 1706
BseJI	GATNNNNATC	1 cut(s)	1616
BseLI	CCNNNNNNNGG	5 cut(s)	79, 80, 472, 898, 1316
BseMI	GCAATG	3 cut(s)	575, 714, 977
BseMII	CTCAG	5 cut(s)	236, 543, 860, 898, 1441
BseNI	ACTGG	5 cut(s)	101, 134, 686, 1969, 1978
BseRI	GAGGAG	3 cut(s)	338, 929, 1562
BseSI	GKGCMC	2 cut(s)	480, 1003
BseXI	GCAGC	6 cut(s)	534, 592, 716, 1334, 1470, 1732
BseYI	CCCAGC	1 cut(s)	1589
BsgI	GTGCAG	2 cut(s)	419, 1409
Bsh1285I	CGRYCG	1 cut(s)	69
BshFI	GGCC	6 cut(s)	5, 59, 158, 167, 188, 1556
BshNI	GGYRCC	3 cut(s)	215, 475, 1000
BshTI	ACCGGT	1 cut(s)	64
BsiEI	CGRYCG	1 cut(s)	69
BsiHKAI	GWGCWC	1 cut(s)	1536
BsiHKCI	CYCGRG	1 cut(s)	1577
BsiSI	CCGG	6 cut(s)	29, 65, 80, 310, 614, 775
BslFI	GGGAC	3 cut(s)	69, 158, 873
BslI	CCNNNNNNNGG	5 cut(s)	79, 80, 472, 898, 1316
BsmAI	GTCTC	3 cut(s)	102, 320, 1964
BsmFI	GGGAC	3 cut(s)	69, 158, 873
BsmI	GAATGC	1 cut(s)	1093
BsnI	GGCC	6 cut(s)	5, 59, 158, 167, 188, 1556
Bso31I	GGTCTC	1 cut(s)	102
BsoBI	CYCGRG	1 cut(s)	1577
Bsp1286I	GDGCHC	4 cut(s)	480, 1003, 1536, 1896
BspACI	CCGC	5 cut(s)	6, 15, 226, 320, 488
BspANI	GGCC	6 cut(s)	5, 59, 158, 167, 188, 1556
BspCNI	CTCAG	5 cut(s)	237, 544, 859, 897, 1440
BspLI	GGNNCC	9 cut(s)	44, 58, 84, 85, 217, 477, 1002, 1180, 1242
BspMAI	CTGCAG	1 cut(s)	1750
BspPI	GGATC	7 cut(s)	133, 1070, 1153, 1235, 1248, 1601, 1948
BspT107I	GGYRCC	3 cut(s)	215, 475, 1000
BspTNI	GGTCTC	1 cut(s)	102
BsrDI	GCAATG	3 cut(s)	575, 714, 977
BsrFI	RCCGGY	1 cut(s)	64
BsrI	ACTGG	5 cut(s)	101, 134, 686, 1969, 1978
BssAI	RCCGGY	1 cut(s)	64
BssECI	CCNNGG	7 cut(s)	87, 183, 310, 858, 891, 1291, 1557
BssNI	GRCGYC	1 cut(s)	216
BssT1I	CCWWGG	2 cut(s)	858, 1557
Bst2UI	CCWGG	3 cut(s)	693, 893, 1292
Bst4CI	ACNGT	2 cut(s)	1506, 1639
Bst6I	CTCTTC	3 cut(s)	147, 1406, 1997
BstACI	GRCGYC	1 cut(s)	216
BstAPI	GCANNNNNTGC	2 cut(s)	902, 1070
BstC8I	GCNNGC	5 cut(s)	226, 254, 868, 1345, 1518
BstDEI	CTNAG	5 cut(s)	245, 552, 846, 884, 1427
BstDSI	CCRYGG	2 cut(s)	87, 183
BstF5I	GGATG	7 cut(s)	105, 265, 634, 907, 1237, 1375, 1706
BstH2I	RGCGCY	1 cut(s)	219
BstHHI	GCGC	4 cut(s)	218, 286, 930, 1818
BstMAI	GTCTC	3 cut(s)	102, 320, 1964
BstMCI	CGRYCG	1 cut(s)	69
BstMWI	GCNNNNNNNGC	9 cut(s)	14, 164, 262, 832, 863, 902, 1070, 1579, 1813
BstNI	CCWGG	3 cut(s)	693, 893, 1292
BstNSI	RCATGY	1 cut(s)	1267
BstSCI	CCNGG	6 cut(s)	28, 79, 309, 691, 891, 1290
BstSFI	CTRYAG	2 cut(s)	1453, 1746
BstSLI	GKGCMC	2 cut(s)	480, 1003
BstV1I	GCAGC	6 cut(s)	534, 592, 716, 1334, 1470, 1732
BstX2I	RGATCY	2 cut(s)	1158, 1240
BstYI	RGATCY	2 cut(s)	1158, 1240
BsuI	GTATCC	2 cut(s)	1367, 1732
BsuRI	GGCC	6 cut(s)	5, 59, 158, 167, 188, 1556
BtgI	CCRYGG	2 cut(s)	87, 183
BtrI	CACGTC	1 cut(s)	1366
BtsCI	GGATG	7 cut(s)	105, 265, 634, 907, 1237, 1375, 1706
BtsI	GCAGTG	3 cut(s)	877, 903, 1796
BtsIMutI	CAGTG	4 cut(s)	877, 903, 1635, 1796
Cac8I	GCNNGC	5 cut(s)	226, 254, 868, 1345, 1518
CfoI	GCGC	4 cut(s)	218, 286, 930, 1818
Cfr10I	RCCGGY	1 cut(s)	64
Cfr13I	GGNCC	6 cut(s)	43, 57, 83, 166, 772, 1178
CpoI	CGGWCCG	1 cut(s)	772
Csp6I	GTAC	3 cut(s)	556, 606, 1726
CspAI	ACCGGT	1 cut(s)	64
CspCI	CAANNNNNGTGG	4 cut(s)	582, 617, 1655, 1690
CspI	CGGWCCG	1 cut(s)	772
CviAII	CATG	8 cut(s)	170, 452, 990, 1127, 1264, 1333, 1436, 1603
CviQI	GTAC	3 cut(s)	556, 606, 1726
DdeI	CTNAG	5 cut(s)	245, 552, 846, 884, 1427
DinI	GGCGCC	1 cut(s)	217
DraI	TTTAAA	1 cut(s)	1212
DraIII	CACNNNGTG	2 cut(s)	472, 872
DrdI	GACNNNNNNGTC	1 cut(s)	116
DseDI	GACNNNNNNGTC	1 cut(s)	116
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	3 cut(s)	147, 1406, 1997
EarI	CTCTTC	3 cut(s)	147, 1406, 1997
Ecl136II	GAGCTC	1 cut(s)	1534
Eco130I	CCWWGG	2 cut(s)	858, 1557
Eco24I	GRGCYC	2 cut(s)	1536, 1896
Eco31I	GGTCTC	1 cut(s)	102
Eco47I	GGWCC	4 cut(s)	43, 83, 772, 1178
Eco53kI	GAGCTC	1 cut(s)	1534
Eco57I	CTGAAG	2 cut(s)	693, 776
Eco88I	CYCGRG	1 cut(s)	1577
EcoICRI	GAGCTC	1 cut(s)	1534
EcoO109I	RGGNCCY	3 cut(s)	43, 83, 1178
EcoRII	CCWGG	3 cut(s)	691, 891, 1290
EcoT14I	CCWWGG	2 cut(s)	858, 1557
EcoT22I	ATGCAT	2 cut(s)	907, 1128
EcoT38I	GRGCYC	2 cut(s)	1536, 1896
EgeI	GGCGCC	1 cut(s)	217
EheI	GGCGCC	1 cut(s)	217
ErhI	CCWWGG	2 cut(s)	858, 1557
FaeI	CATG	8 cut(s)	173, 455, 993, 1130, 1267, 1336, 1439, 1606
FalI	AAGNNNNNCTT	2 cut(s)	1176, 1208
FaqI	GGGAC	3 cut(s)	69, 158, 873
FatI	CATG	8 cut(s)	169, 451, 989, 1126, 1263, 1332, 1435, 1602
FauI	CCCGC	1 cut(s)	233
FbaI	TGATCA	1 cut(s)	1438
FblI	GTMKAC	1 cut(s)	69
Fnu4HI	GCNGC	8 cut(s)	6, 489, 548, 581, 705, 1348, 1484, 1746
FokI	GGATG	7 cut(s)	112, 252, 641, 914, 1244, 1382, 1713
FriOI	GRGCYC	2 cut(s)	1536, 1896
Fsp4HI	GCNGC	8 cut(s)	6, 489, 548, 581, 705, 1348, 1484, 1746
FspBI	CTAG	2 cut(s)	516, 1586
FspI	TGCGCA	2 cut(s)	929, 1817
GlaI	GCGC	4 cut(s)	217, 285, 929, 1817
GluI	GCNGC	8 cut(s)	6, 489, 548, 581, 705, 1348, 1484, 1746
GsaI	CCCAGC	1 cut(s)	1593
HaeII	RGCGCY	1 cut(s)	219
HaeIII	GGCC	6 cut(s)	5, 59, 158, 167, 188, 1556
HapII	CCGG	6 cut(s)	29, 65, 80, 310, 614, 775
HhaI	GCGC	4 cut(s)	218, 286, 930, 1818
Hin1I	GRCGYC	1 cut(s)	216
Hin1II	CATG	8 cut(s)	173, 455, 993, 1130, 1267, 1336, 1439, 1606
Hin6I	GCGC	4 cut(s)	216, 284, 928, 1816
HinP1I	GCGC	4 cut(s)	216, 284, 928, 1816
HincII	GTYRAC	2 cut(s)	70, 679
HindII	GTYRAC	2 cut(s)	70, 679
HinfI	GANTC	5 cut(s)	76, 292, 738, 974, 1850
HpaII	CCGG	6 cut(s)	29, 65, 80, 310, 614, 775
HphI	GGTGA	4 cut(s)	375, 1528, 1573, 1979
Hpy166II	GTNNAC	5 cut(s)	70, 94, 679, 1170, 1285
Hpy188I	TCNGA	6 cut(s)	107, 291, 496, 772, 849, 878
Hpy8I	GTNNAC	5 cut(s)	70, 94, 679, 1170, 1285
Hpy99I	CGWCG	1 cut(s)	182
HpyAV	CCTTC	9 cut(s)	199, 715, 751, 1054, 1230, 1294, 1546, 1691, 1979
HpyCH4III	ACNGT	2 cut(s)	1506, 1639
HpyCH4IV	ACGT	4 cut(s)	1327, 1365, 1377, 2021
HpyF10VI	GCNNNNNNNGC	9 cut(s)	14, 164, 262, 832, 863, 902, 1070, 1579, 1813
HpyF3I	CTNAG	5 cut(s)	245, 552, 846, 884, 1427
HpySE526I	ACGT	4 cut(s)	1327, 1365, 1377, 2021
Hsp92I	GRCGYC	1 cut(s)	216
Hsp92II	CATG	8 cut(s)	173, 455, 993, 1130, 1267, 1336, 1439, 1606
HspAI	GCGC	4 cut(s)	216, 284, 928, 1816
KasI	GGCGCC	1 cut(s)	215
KflI	GGGWCCC	1 cut(s)	83
Ksp22I	TGATCA	1 cut(s)	1438
LmnI	GCTCC	3 cut(s)	659, 1048, 1637
Lsp1109I	GCAGC	6 cut(s)	534, 592, 716, 1334, 1470, 1732
LweI	GCATC	7 cut(s)	274, 295, 451, 500, 892, 1113, 2020
MaeI	CTAG	2 cut(s)	516, 1586
MaeII	ACGT	4 cut(s)	1327, 1365, 1377, 2021
MaeIII	GTNAC	3 cut(s)	370, 442, 1328
MboII	GAAGA	7 cut(s)	164, 266, 1132, 1196, 1423, 1787, 2014
MfeI	CAATTG	4 cut(s)	260, 1052, 1721, 2025
MflI	RGATCY	2 cut(s)	1158, 1240
MhlI	GDGCHC	4 cut(s)	480, 1003, 1536, 1896
Mly113I	GGCGCC	1 cut(s)	216
MlyI	GAGTC	1 cut(s)	1859
MmeI	TCCRAC	3 cut(s)	49, 483, 1277
Mph1103I	ATGCAT	2 cut(s)	907, 1128
MseI	TTAA	6 cut(s)	389, 639, 650, 1211, 1542, 1959
MslI	CAYNNNNRTG	2 cut(s)	994, 1607
MspA1I	CMGCKG	1 cut(s)	1745
MspI	CCGG	6 cut(s)	29, 65, 80, 310, 614, 775
MspR9I	CCNGG	6 cut(s)	30, 81, 311, 693, 893, 1292
MunI	CAATTG	4 cut(s)	260, 1052, 1721, 2025
Mva1269I	GAATGC	1 cut(s)	1093
MvaI	CCWGG	3 cut(s)	693, 893, 1292
MwoI	GCNNNNNNNGC	9 cut(s)	14, 164, 262, 832, 863, 902, 1070, 1579, 1813
NarI	GGCGCC	1 cut(s)	216
NciI	CCSGG	3 cut(s)	30, 81, 311
NlaIII	CATG	8 cut(s)	173, 455, 993, 1130, 1267, 1336, 1439, 1606
NlaIV	GGNNCC	9 cut(s)	44, 58, 84, 85, 217, 477, 1002, 1180, 1242
NmuCI	GTSAC	1 cut(s)	442
NsbI	TGCGCA	2 cut(s)	929, 1817
NsiI	ATGCAT	2 cut(s)	907, 1128
NspI	RCATGY	1 cut(s)	1267
PcsI	WCGNNNNNNNCGW	1 cut(s)	874
PctI	GAATGC	1 cut(s)	1093
PfeI	GAWTC	4 cut(s)	76, 292, 738, 974
PflMI	CCANNNNNTGG	2 cut(s)	472, 1316
PinAI	ACCGGT	1 cut(s)	64
PkrI	GCNGC	8 cut(s)	7, 490, 549, 582, 706, 1349, 1485, 1747
PleI	GAGTC	1 cut(s)	1858
PluTI	GGCGCC	1 cut(s)	219
PpsI	GAGTC	1 cut(s)	1858
PpuMI	RGGWCCY	3 cut(s)	43, 83, 1178
PshBI	ATTAAT	1 cut(s)	639
Psp124BI	GAGCTC	1 cut(s)	1536
Psp5II	RGGWCCY	3 cut(s)	43, 83, 1178
Psp6I	CCWGG	3 cut(s)	691, 891, 1290
PspFI	CCCAGC	1 cut(s)	1589
PspGI	CCWGG	3 cut(s)	691, 891, 1290
PspN4I	GGNNCC	9 cut(s)	44, 58, 84, 85, 217, 477, 1002, 1180, 1242
PspPI	GGNCC	6 cut(s)	43, 57, 83, 166, 772, 1178
PspPPI	RGGWCCY	3 cut(s)	43, 83, 1178
PstI	CTGCAG	1 cut(s)	1750
PsuI	RGATCY	2 cut(s)	1158, 1240
PvuII	CAGCTG	1 cut(s)	1745
RsaI	GTAC	3 cut(s)	557, 607, 1727
RsaNI	GTAC	3 cut(s)	556, 606, 1726
RseI	CAYNNNNRTG	2 cut(s)	994, 1607
Rsr2I	CGGWCCG	1 cut(s)	772
RsrII	CGGWCCG	1 cut(s)	772
SacI	GAGCTC	1 cut(s)	1536
SalI	GTCGAC	1 cut(s)	68
SaqAI	TTAA	6 cut(s)	389, 639, 650, 1211, 1542, 1959
SatI	GCNGC	8 cut(s)	6, 489, 548, 581, 705, 1348, 1484, 1746
Sau96I	GGNCC	6 cut(s)	43, 57, 83, 166, 772, 1178
SchI	GAGTC	1 cut(s)	1859
ScrFI	CCNGG	6 cut(s)	30, 81, 311, 693, 893, 1292
SduI	GDGCHC	4 cut(s)	480, 1003, 1536, 1896
SfaNI	GCATC	7 cut(s)	274, 295, 451, 500, 892, 1113, 2020
SfcI	CTRYAG	2 cut(s)	1453, 1746
SfiI	GGCCNNNNNGGCC	1 cut(s)	164
SfoI	GGCGCC	1 cut(s)	217
SinI	GGWCC	4 cut(s)	43, 83, 772, 1178
SmiI	ATTTAAAT	1 cut(s)	1212
SmiMI	CAYNNNNRTG	2 cut(s)	994, 1607
SmlI	CTYRAG	1 cut(s)	1163
SmoI	CTYRAG	1 cut(s)	1163
SsiI	CCGC	5 cut(s)	6, 15, 226, 320, 488
SspDI	GGCGCC	1 cut(s)	215
SspI	AATATT	1 cut(s)	1766
SspMI	CTAG	2 cut(s)	516, 1586
SstI	GAGCTC	1 cut(s)	1536
StyD4I	CCNGG	6 cut(s)	28, 79, 309, 691, 891, 1290
StyI	CCWWGG	2 cut(s)	858, 1557
SwaI	ATTTAAAT	1 cut(s)	1212
TaaI	ACNGT	2 cut(s)	1506, 1639
TaiI	ACGT	4 cut(s)	1330, 1368, 1380, 2024
TaqI	TCGA	2 cut(s)	69, 201
TatI	WGTACW	1 cut(s)	1725
TauI	GCSGC	2 cut(s)	8, 491
TfiI	GAWTC	4 cut(s)	76, 292, 738, 974
Tru1I	TTAA	6 cut(s)	389, 639, 650, 1211, 1542, 1959
Tru9I	TTAA	6 cut(s)	389, 639, 650, 1211, 1542, 1959
TscAI	CASTG	4 cut(s)	877, 903, 1642, 1796
TseFI	GTSAC	1 cut(s)	442
TseI	GCWGC	6 cut(s)	547, 580, 704, 1347, 1483, 1745
Tsp45I	GTSAC	1 cut(s)	442
TspGWI	ACGGA	1 cut(s)	10
TspRI	CASTG	4 cut(s)	877, 903, 1642, 1796
Van91I	CCANNNNNTGG	2 cut(s)	472, 1316
VpaK11BI	GGWCC	4 cut(s)	43, 83, 772, 1178
VspI	ATTAAT	1 cut(s)	639
XapI	RAATTY	3 cut(s)	1028, 1358, 1800
XceI	RCATGY	1 cut(s)	1267
XmiI	GTMKAC	1 cut(s)	69
XspI	CTAG	2 cut(s)	516, 1586
Zsp2I	ATGCAT	2 cut(s)	907, 1128

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.