Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0002032

Physical Location & Seq

Genomic Coordinates Reverse (-)

49572088 .. 49576622

Gene Structure 4535 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00255350.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1968 bp

ATGGCCGCAAACACCGCCTCCGTCCAACCGGGTCGGTTTCGGGTCCTAAAGCAAGGGGCCAAACCGGTCGAACCGAATCCGGGTCCCGTGGTTTATTGGATGTTCAGAGACCAACGGGTCAAAGACAACTGGGCGTTGATCCACGCCGTTGAAGAGGCCAACAAGGCCCATGTCCCGGTCGCCGTGGCCTTCAATTTGTTCGATCAATTTCTTGGCGCCAAAGCCCGCCATTTAGGGTTTATGCTGAGGGGCTTGCGACAATTGCATCCTGATCTTGAAGAATCGCATCAGATTCCATTTTTTCTTGTCCGGAGGTTTATTGGTGGGTTTTACATACAGGGAGAAGCGGAGGAGACTATACCCAATTTTGTGAGGGAATGTGGGGCTTCACTTTTAGTAACAGATTTTTCACCTTTAAGGGAGGTTCAGAAATGTAAAGAGGAAATATGCAAGAGGGTTAGTGATTTTGTGACCGTACATGAAGTTGATGCCCACAATGTGGTGCCCGTCTGGGAGGCATCGGAGAAGTTGGAGTATAGTGCTAGGACTATAAGGAGTAAGATAAATAAAAGGCTGCCTGAGTACCTTATTGAATTTCCTACGTTGCAGCCACCTATTGCAAAATGGGTGGGCACAAGTCCGGCGATTGATTGGGATGGTCTTATTGATGAAGTTTTAAGGAAAGGAGCAGAAGTTCCTGAAGTGGACTGGTGCGAACCAGGAGAAAAGGCAGCGATGGAAGTTTTGATGGGTAGCAAAAATGGATTCTTGACAAAAAGGCTGAAGGGTTATTCATCGGACCGGAATAACCCTTTGAAACCAAGAGGGTGTCTGGTCTTTCTCCATATTTGCATTTTGGGCAAATATCTGCTCAGAGTGGATGCATTTTTAGAGGAGTTGATTGTGCGCAGAGAACTTGCTGACAACTACTGCTTTTACCAGCCTCAATATGATTCATTGCAAGGGGCATGGGAATGGGCACGTAAGACCTTAATGGACCATGCTTCGGATAAGCGAGAACATATTTACACGAGGGAGCAATTGGAGAAGGCACAAACTGCTGATCCTGTTGTCTGCTGTATCATTTTCTTATCACCTTCTGTTTCTTCTTCTCCTGCTTTTCAGCTCTGGAATGCCTCCCAATGTGAGATGGTTCATTACGGGAAGATGCATGGTTTTATGCGGATGTATTGGGCAAAAAAGATCCTTGAGTGGACAAGAGGACCCGAAGAAGCCCTTGAAATATCCATATATTTAAATAACAAGTATGAAATAGATGGAAGGGATCCCAATGGATATGTTGGTTGCATGTGGTCAATATGTGGTGTTCACGACCAGACAACTGGAAGTGATATAAATGAGAATGAAATTGGGATGAGAATCATTTTCAAGGCTTGGTGCAACCAAGAAGAGAAAAGCGGAAACTCCTACTCAGTGAATAGGCCAAGGAACTCTGCAGTTGTTAATGATGAGCCAATCATTGATTATTCTGAGGACGGAGTGACGAGTTTTACCCAAATCACACTCCAGGTGGCTGATCCTGATATGCATTTTGGGAATGGAGGGCTTGACGAGTGTTGGCCTCTGCCTCACCATAACTCGAAGAGCACATCAAACCTCTTACCTGGGTCTTCGCCGATTGCGACCAAATTCGCCGGCAATTGTAGAAAACCCGCCGGCAGCAACCGCCGCCAGTCTCGCCAGCAGTCGTGGTCGAAGTCGGAAAATACGACTGGACCGCCATGCACAGTGGAAGCTTTCGAGCCTCAGGCCGCCATCATAGCTCGCCCGTTTGAACCAAAGGGGACAAAGCCCCGCTTCGCACCTCCGAGAAACGTCACCGGTCTGTCGAACAGAGATCGCGGGAATCGAAAGGAGGAATCGGGTCACTGTTATGGGTTTTGGGGTCGAGGAACCGGGTCGACCAGTCTGGCTTTCTTCTACACCGTCTCGATATTTATACTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000719 GO:0003674 GO:0003824 GO:0003904 GO:0003913 GO:0005488 GO:0006139 GO:0006259 GO:0006281 GO:0006290 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009650 GO:0009987 GO:0016829 GO:0016830 GO:0033554 GO:0034641 GO:0036094 GO:0043167 GO:0043168 GO:0043170 GO:0044237 GO:0044238 GO:0044260 GO:0046483 GO:0048037 GO:0050660 GO:0050662 GO:0050896 GO:0051716 GO:0071704 GO:0071949 GO:0090304 GO:0097159 GO:0140097 GO:1901265 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DNA_photolyase

Protein Analysis

655

Amino Acids

74.17

Weight (kDa)

6.8

Isoelectric Point (pI)

45.68

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DNA_photolyase	PF00875	30 - 201	9.3e-27	DNA photolyase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002032)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12370 AT1G12370 AT1G12370
fragaria_vesca	FvH4_5g00790 FvH4_5g00790 FvH4_5g00790 FvH4_5g00790 FvH4_5g00790 FvH4_5g00790 FvH4_5g00790
malus_domestica	MD04G1078900.v1.1
prunus_persica	Prupe.5G080300_v2.0.a1 Prupe.5G080300_v2.0.a1 Prupe.5G080300_v2.0.a1 Prupe.5G080300_v2.0.a1
pyrus_communis	pycom04g07070
rosa_chinensis	RchiOBHm_Chr7g0201341 RchiOBHm_Chr7g0201371 RchiOBHm_Chr7g0201391
rosa_laevigata	RLG00000003679
rosa_multiflora	Rmu_co8093880.1_g000001 Rmu_co8322589.1_g000001 Rmu_sc0001469.1_g000010 Rmu_sc0001469.1_g000012 Rmu_sc0013971.1_g000001 Rmu_sc0013971.1_g000004 Rmu_sc0024878.1_g000001 Rmu_sc0024878.1_g000004 Rmu_sc0026181.1_g000001
rosa_roxburghii	Rroxscaffold_3G00226330 Rroxscaffold_3G00255330 Rroxscaffold_3G00255340 Rroxscaffold_3G00255350
rosa_rugosa	Rorug07G0062600 Rorug07G0062700
rosa_samantha	Rh7AG190200 Rh7BG192600 Rh7CG200900 Rh7CG201300 Rh7CG201400 Rh7CG201500 Rh7DG195000 Rh7DG195200
rosa_wichuraiana	Rw7G016680 Rw7G016690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	116
Acc16I	TGCGCA	1 cut(s)	908
AccB1I	GGYRCC	2 cut(s)	215, 502
AccB7I	CCANNNNNTGG	1 cut(s)	499
AccI	GTMKAC	1 cut(s)	1922
AccII	CGCG	1 cut(s)	1863
AccIII	TCCGGA	1 cut(s)	309
AclWI	GGATC	6 cut(s)	133, 1058, 1198, 1280, 1293, 1532
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	2 cut(s)	593, 1649
AcuI	CTGAAG	2 cut(s)	720, 803
AcyI	GRCGYC	1 cut(s)	216
AdeI	CACNNNGTG	1 cut(s)	499
AfaI	GTAC	2 cut(s)	477, 584
AfiI	CCNNNNNNNGG	4 cut(s)	80, 175, 499, 1006
AgeI	ACCGGT	2 cut(s)	64, 1841
AgsI	TTSAA	8 cut(s)	152, 193, 278, 593, 817, 1241, 1390, 1796
AjnI	CCWGG	3 cut(s)	718, 1527, 1624
AloI	GAACNNNNNNTCC	2 cut(s)	678, 710
AluBI	AGCT	3 cut(s)	1126, 1757, 1784
AluI	AGCT	3 cut(s)	1126, 1757, 1784
Alw21I	GWGCWC	1 cut(s)	1610
Alw26I	GTCTC	4 cut(s)	102, 347, 1701, 1954
AlwI	GGATC	6 cut(s)	133, 1058, 1198, 1280, 1293, 1532
Aor13HI	TCCGGA	1 cut(s)	309
AoxI	GGCC	8 cut(s)	3, 57, 156, 165, 186, 1442, 1580, 1770
ApeKI	GCWGC	4 cut(s)	574, 607, 731, 1680
ApoI	RAATTY	2 cut(s)	593, 1649
AsiGI	ACCGGT	2 cut(s)	64, 1841
AspLEI	GCGC	2 cut(s)	218, 909
AspS9I	GGNCC	8 cut(s)	43, 57, 83, 166, 799, 997, 1223, 1736
AsuC2I	CCSGG	4 cut(s)	30, 81, 176, 1918
AsuHPI	GGTGA	4 cut(s)	402, 1086, 1583, 1831
AvaII	GGWCC	6 cut(s)	43, 83, 799, 997, 1223, 1736
AxyI	CCTNAGG	1 cut(s)	1767
BaeGI	GKGCMC	3 cut(s)	507, 635, 982
BamHI	GGATCC	1 cut(s)	1285
BanI	GGYRCC	2 cut(s)	215, 502
BauI	CACGAG	1 cut(s)	1030
BbsI	GAAGAC	1 cut(s)	1623
Bbv12I	GWGCWC	1 cut(s)	1610
BbvCI	CCTCAGC	1 cut(s)	245
BbvI	GCAGC	4 cut(s)	561, 619, 743, 1692
BccI	CCATC	6 cut(s)	650, 730, 742, 1144, 1271, 1784
BceAI	ACGGC	2 cut(s)	131, 167
BciT130I	CCWGG	3 cut(s)	720, 1529, 1626
BcnI	CCSGG	4 cut(s)	30, 81, 176, 1918
BcoDI	GTCTC	4 cut(s)	102, 347, 1701, 1954
BfaI	CTAG	1 cut(s)	543
BfmI	CTRYAG	1 cut(s)	1455
BfoI	RGCGCY	1 cut(s)	219
BglI	GCCNNNNNGGC	1 cut(s)	164
BisI	GCNGC	7 cut(s)	6, 575, 608, 732, 1681, 1690, 1773
BlsI	GCNGC	7 cut(s)	7, 576, 609, 733, 1682, 1691, 1774
Bme1390I	CCNGG	7 cut(s)	30, 81, 176, 720, 1529, 1626, 1918
Bme18I	GGWCC	6 cut(s)	43, 83, 799, 997, 1223, 1736
BmgT120I	GGNCC	8 cut(s)	43, 57, 83, 166, 799, 997, 1223, 1736
BmiI	GGNNCC	9 cut(s)	44, 58, 84, 85, 217, 504, 1225, 1287, 1915
BmrFI	CCNGG	7 cut(s)	30, 81, 176, 720, 1529, 1626, 1918
BmrI	ACTGGG	1 cut(s)	139
BmsI	GCATC	6 cut(s)	274, 295, 478, 527, 871, 1158
BmuI	ACTGGG	1 cut(s)	139
BpiI	GAAGAC	1 cut(s)	1623
BpmI	CTGGAG	1 cut(s)	1511
Bpu10I	CCTNAGC	1 cut(s)	245
BpuEI	CTTGAG	1 cut(s)	1229
BpuMI	CCSGG	4 cut(s)	30, 81, 176, 1918
BsaAI	YACGTR	1 cut(s)	983
BsaBI	GATNNNNATC	1 cut(s)	1379
BsaHI	GRCGYC	1 cut(s)	216
BsaI	GGTCTC	1 cut(s)	102
BsaJI	CCNNGG	4 cut(s)	87, 183, 1445, 1625
BsaWI	WCCGGW	4 cut(s)	64, 309, 801, 1841
BsaXI	ACNNNNNCTCC	3 cut(s)	32, 678, 708
Bsc4I	CCNNNNNNNGG	4 cut(s)	80, 175, 499, 1006
Bse118I	RCCGGY	4 cut(s)	64, 1655, 1676, 1841
Bse1I	ACTGG	6 cut(s)	134, 713, 1348, 1693, 1738, 1926
Bse21I	CCTNAGG	1 cut(s)	1767
Bse3DI	GCAATG	1 cut(s)	956
Bse8I	GATNNNNATC	1 cut(s)	1379
BseAI	TCCGGA	1 cut(s)	309
BseBI	CCWGG	3 cut(s)	720, 1529, 1626
BseDI	CCNNGG	4 cut(s)	87, 183, 1445, 1625
BseGI	GGATG	6 cut(s)	105, 265, 661, 886, 1191, 1380
BseJI	GATNNNNATC	1 cut(s)	1379
BseLI	CCNNNNNNNGG	4 cut(s)	80, 175, 499, 1006
BseMI	GCAATG	1 cut(s)	956
BseMII	CTCAG	6 cut(s)	236, 570, 886, 1446, 1482, 1781
BseNI	ACTGG	6 cut(s)	134, 713, 1348, 1693, 1738, 1926
BseRI	GAGGAG	2 cut(s)	365, 908
BseSI	GKGCMC	3 cut(s)	507, 635, 982
BseXI	GCAGC	4 cut(s)	561, 619, 743, 1692
Bsh1236I	CGCG	1 cut(s)	1863
Bsh1285I	CGRYCG	2 cut(s)	69, 180
BshFI	GGCC	8 cut(s)	5, 59, 158, 167, 188, 1444, 1582, 1772
BshNI	GGYRCC	2 cut(s)	215, 502
BshTI	ACCGGT	2 cut(s)	64, 1841
BsiEI	CGRYCG	2 cut(s)	69, 180
BsiHKAI	GWGCWC	1 cut(s)	1610
BslFI	GGGAC	3 cut(s)	69, 158, 1819
BslI	CCNNNNNNNGG	4 cut(s)	80, 175, 499, 1006
BsmAI	GTCTC	4 cut(s)	102, 347, 1701, 1954
BsmBI	CGTCTC	1 cut(s)	1954
BsmFI	GGGAC	3 cut(s)	69, 158, 1819
BsmI	GAATGC	1 cut(s)	1138
BsnI	GGCC	8 cut(s)	5, 59, 158, 167, 188, 1444, 1582, 1772
Bso31I	GGTCTC	1 cut(s)	102
Bsp1286I	GDGCHC	4 cut(s)	507, 635, 982, 1610
Bsp13I	TCCGGA	1 cut(s)	309
Bsp143I	GATC	8 cut(s)	138, 202, 271, 1063, 1203, 1285, 1537, 1858
BspANI	GGCC	8 cut(s)	5, 59, 158, 167, 188, 1444, 1582, 1772
BspCNI	CTCAG	6 cut(s)	237, 571, 885, 1445, 1483, 1780
BspEI	TCCGGA	1 cut(s)	309
BspFNI	CGCG	1 cut(s)	1863
BspLI	GGNNCC	9 cut(s)	44, 58, 84, 85, 217, 504, 1225, 1287, 1915
BspMAI	CTGCAG	1 cut(s)	1459
BspPI	GGATC	6 cut(s)	133, 1058, 1198, 1280, 1293, 1532
BspQI	GCTCTTC	1 cut(s)	1598
BspT107I	GGYRCC	2 cut(s)	215, 502
BspTNI	GGTCTC	1 cut(s)	102
BsrDI	GCAATG	1 cut(s)	956
BsrFI	RCCGGY	4 cut(s)	64, 1655, 1676, 1841
BsrI	ACTGG	6 cut(s)	134, 713, 1348, 1693, 1738, 1926
BssAI	RCCGGY	4 cut(s)	64, 1655, 1676, 1841
BssECI	CCNNGG	4 cut(s)	87, 183, 1445, 1625
BssMI	GATC	8 cut(s)	138, 202, 271, 1063, 1203, 1285, 1537, 1858
BssNI	GRCGYC	1 cut(s)	216
BssSI	CACGAG	1 cut(s)	1030
BssT1I	CCWWGG	1 cut(s)	1445
Bst2BI	CACGAG	1 cut(s)	1030
Bst2UI	CCWGG	3 cut(s)	720, 1529, 1626
Bst4CI	ACNGT	4 cut(s)	475, 1750, 1892, 1948
Bst6I	CTCTTC	3 cut(s)	147, 1404, 1598
BstACI	GRCGYC	1 cut(s)	216
BstAPI	GCANNNNNTGC	1 cut(s)	1058
BstBAI	YACGTR	1 cut(s)	983
BstC8I	GCNNGC	6 cut(s)	226, 254, 1657, 1678, 1703, 1786
BstDEI	CTNAG	6 cut(s)	245, 579, 872, 1432, 1491, 1767
BstDSI	CCRYGG	2 cut(s)	87, 183
BstF5I	GGATG	6 cut(s)	105, 265, 661, 886, 1191, 1380
BstFNI	CGCG	1 cut(s)	1863
BstH2I	RGCGCY	1 cut(s)	219
BstHHI	GCGC	2 cut(s)	218, 909
BstKTI	GATC	8 cut(s)	141, 205, 274, 1066, 1206, 1288, 1540, 1861
BstMAI	GTCTC	4 cut(s)	102, 347, 1701, 1954
BstMBI	GATC	8 cut(s)	138, 202, 271, 1063, 1203, 1285, 1537, 1858
BstMCI	CGRYCG	2 cut(s)	69, 180
BstMWI	GCNNNNNNNGC	9 cut(s)	14, 164, 262, 858, 1058, 1686, 1689, 1698, 1781
BstNI	CCWGG	3 cut(s)	720, 1529, 1626
BstNSI	RCATGY	1 cut(s)	1312
BstSCI	CCNGG	7 cut(s)	28, 79, 174, 718, 1527, 1624, 1916
BstSFI	CTRYAG	1 cut(s)	1455
BstSLI	GKGCMC	3 cut(s)	507, 635, 982
BstUI	CGCG	1 cut(s)	1863
BstV1I	GCAGC	4 cut(s)	561, 619, 743, 1692
BstV2I	GAAGAC	1 cut(s)	1623
BstX2I	RGATCY	2 cut(s)	1203, 1285
BstXI	CCANNNNNNTGG	1 cut(s)	1343
BstYI	RGATCY	2 cut(s)	1203, 1285
Bsu36I	CCTNAGG	1 cut(s)	1767
BsuRI	GGCC	8 cut(s)	5, 59, 158, 167, 188, 1444, 1582, 1772
BtgI	CCRYGG	2 cut(s)	87, 183
BtgZI	GCGATG	1 cut(s)	749
BtsCI	GGATG	6 cut(s)	105, 265, 661, 886, 1191, 1380
BtsIMutI	CAGTG	3 cut(s)	1440, 1755, 1888
Cac8I	GCNNGC	6 cut(s)	226, 254, 1657, 1678, 1703, 1786
CfoI	GCGC	2 cut(s)	218, 909
Cfr10I	RCCGGY	4 cut(s)	64, 1655, 1676, 1841
Cfr13I	GGNCC	8 cut(s)	43, 57, 83, 166, 799, 997, 1223, 1736
CpoI	CGGWCCG	1 cut(s)	799
Csp6I	GTAC	2 cut(s)	476, 583
CspAI	ACCGGT	2 cut(s)	64, 1841
CspCI	CAANNNNNGTGG	2 cut(s)	609, 644
CspI	CGGWCCG	1 cut(s)	799
CviAII	CATG	7 cut(s)	170, 479, 969, 1001, 1172, 1309, 1743
CviQI	GTAC	2 cut(s)	476, 583
DdeI	CTNAG	6 cut(s)	245, 579, 872, 1432, 1491, 1767
DinI	GGCGCC	1 cut(s)	217
DpnI	GATC	8 cut(s)	140, 204, 273, 1065, 1205, 1287, 1539, 1860
DpnII	GATC	8 cut(s)	138, 202, 271, 1063, 1203, 1285, 1537, 1858
DraI	TTTAAA	1 cut(s)	1257
DraIII	CACNNNGTG	1 cut(s)	499
DrdI	GACNNNNNNGTC	1 cut(s)	116
DseDI	GACNNNNNNGTC	1 cut(s)	116
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	3 cut(s)	147, 1404, 1598
EarI	CTCTTC	3 cut(s)	147, 1404, 1598
Eco130I	CCWWGG	1 cut(s)	1445
Eco31I	GGTCTC	1 cut(s)	102
Eco47I	GGWCC	6 cut(s)	43, 83, 799, 997, 1223, 1736
Eco57I	CTGAAG	2 cut(s)	720, 803
Eco81I	CCTNAGG	1 cut(s)	1767
EcoO109I	RGGNCCY	3 cut(s)	43, 83, 1223
EcoRII	CCWGG	3 cut(s)	718, 1527, 1624
EcoT14I	CCWWGG	1 cut(s)	1445
EcoT22I	ATGCAT	3 cut(s)	886, 1173, 1551
EgeI	GGCGCC	1 cut(s)	217
EheI	GGCGCC	1 cut(s)	217
ErhI	CCWWGG	1 cut(s)	1445
Esp3I	CGTCTC	1 cut(s)	1954
FaeI	CATG	7 cut(s)	173, 482, 972, 1004, 1175, 1312, 1746
FalI	AAGNNNNNCTT	4 cut(s)	1221, 1253, 1802, 1834
FaqI	GGGAC	3 cut(s)	69, 158, 1819
FatI	CATG	7 cut(s)	169, 478, 968, 1000, 1171, 1308, 1742
FauI	CCCGC	4 cut(s)	233, 1681, 1823, 1856
FblI	GTMKAC	1 cut(s)	1922
Fnu4HI	GCNGC	7 cut(s)	6, 575, 608, 732, 1681, 1690, 1773
FokI	GGATG	6 cut(s)	112, 252, 668, 893, 1198, 1387
Fsp4HI	GCNGC	7 cut(s)	6, 575, 608, 732, 1681, 1690, 1773
FspBI	CTAG	1 cut(s)	543
FspI	TGCGCA	1 cut(s)	908
GlaI	GCGC	2 cut(s)	217, 908
GluI	GCNGC	7 cut(s)	6, 575, 608, 732, 1681, 1690, 1773
GsuI	CTGGAG	1 cut(s)	1511
HaeII	RGCGCY	1 cut(s)	219
HaeIII	GGCC	8 cut(s)	5, 59, 158, 167, 188, 1444, 1582, 1772
HhaI	GCGC	2 cut(s)	218, 909
Hin1I	GRCGYC	1 cut(s)	216
Hin1II	CATG	7 cut(s)	173, 482, 972, 1004, 1175, 1312, 1746
Hin6I	GCGC	2 cut(s)	216, 907
HinP1I	GCGC	2 cut(s)	216, 907
HincII	GTYRAC	1 cut(s)	1923
HindII	GTYRAC	1 cut(s)	1923
HindIII	AAGCTT	1 cut(s)	1755
HinfI	GANTC	8 cut(s)	76, 281, 292, 765, 953, 1380, 1867, 1880
HphI	GGTGA	4 cut(s)	402, 1086, 1583, 1831
Hpy166II	GTNNAC	4 cut(s)	706, 1215, 1330, 1923
Hpy188III	TCNNGA	9 cut(s)	269, 275, 310, 698, 769, 1129, 1331, 1541, 1951
Hpy8I	GTNNAC	4 cut(s)	706, 1215, 1330, 1923
HpyAV	CCTTC	5 cut(s)	199, 778, 1042, 1107, 1275
HpyCH4III	ACNGT	4 cut(s)	475, 1750, 1892, 1948
HpyCH4IV	ACGT	3 cut(s)	602, 982, 1836
HpyF10VI	GCNNNNNNNGC	9 cut(s)	14, 164, 262, 858, 1058, 1686, 1689, 1698, 1781
HpyF3I	CTNAG	6 cut(s)	245, 579, 872, 1432, 1491, 1767
HpySE526I	ACGT	3 cut(s)	602, 982, 1836
Hsp92I	GRCGYC	1 cut(s)	216
Hsp92II	CATG	7 cut(s)	173, 482, 972, 1004, 1175, 1312, 1746
HspAI	GCGC	2 cut(s)	216, 907
KasI	GGCGCC	1 cut(s)	215
KflI	GGGWCCC	1 cut(s)	83
Kpn2I	TCCGGA	1 cut(s)	309
KroI	GCCGGC	2 cut(s)	1655, 1676
KroNI	GCCGGC	2 cut(s)	1657, 1678
Kzo9I	GATC	8 cut(s)	138, 202, 271, 1063, 1203, 1285, 1537, 1858
LguI	GCTCTTC	1 cut(s)	1598
LmnI	GCTCC	2 cut(s)	686, 1036
Lsp1109I	GCAGC	4 cut(s)	561, 619, 743, 1692
LweI	GCATC	6 cut(s)	274, 295, 478, 527, 871, 1158
MaeI	CTAG	1 cut(s)	543
MaeII	ACGT	3 cut(s)	602, 982, 1836
MaeIII	GTNAC	5 cut(s)	397, 469, 1501, 1837, 1886
MalI	GATC	8 cut(s)	140, 204, 273, 1065, 1205, 1287, 1539, 1860
MboI	GATC	8 cut(s)	138, 202, 271, 1063, 1203, 1285, 1537, 1858
MfeI	CAATTG	3 cut(s)	260, 1040, 1660
MflI	RGATCY	2 cut(s)	1203, 1285
MhlI	GDGCHC	4 cut(s)	507, 635, 982, 1610
MluCI	AATT	9 cut(s)	193, 206, 260, 364, 593, 1040, 1368, 1649, 1660
Mly113I	GGCGCC	1 cut(s)	216
MmeI	TCCRAC	3 cut(s)	49, 510, 1701
Mph1103I	ATGCAT	3 cut(s)	886, 1173, 1551
MroI	TCCGGA	1 cut(s)	309
MroNI	GCCGGC	2 cut(s)	1655, 1676
MseI	TTAA	5 cut(s)	416, 677, 992, 1256, 1464
MslI	CAYNNNNRTG	2 cut(s)	973, 1893
MspR9I	CCNGG	7 cut(s)	30, 81, 176, 720, 1529, 1626, 1918
MunI	CAATTG	3 cut(s)	260, 1040, 1660
Mva1269I	GAATGC	1 cut(s)	1138
MvaI	CCWGG	3 cut(s)	720, 1529, 1626
MvnI	CGCG	1 cut(s)	1863
MwoI	GCNNNNNNNGC	9 cut(s)	14, 164, 262, 858, 1058, 1686, 1689, 1698, 1781
NaeI	GCCGGC	2 cut(s)	1657, 1678
NarI	GGCGCC	1 cut(s)	216
NciI	CCSGG	4 cut(s)	30, 81, 176, 1918
NdeII	GATC	8 cut(s)	138, 202, 271, 1063, 1203, 1285, 1537, 1858
NgoMIV	GCCGGC	2 cut(s)	1655, 1676
NlaIII	CATG	7 cut(s)	173, 482, 972, 1004, 1175, 1312, 1746
NlaIV	GGNNCC	9 cut(s)	44, 58, 84, 85, 217, 504, 1225, 1287, 1915
NmuCI	GTSAC	4 cut(s)	469, 1501, 1837, 1886
NsbI	TGCGCA	1 cut(s)	908
NsiI	ATGCAT	3 cut(s)	886, 1173, 1551
NspI	RCATGY	1 cut(s)	1312
PciSI	GCTCTTC	1 cut(s)	1598
PcsI	WCGNNNNNNNCGW	3 cut(s)	1640, 1727, 1867
PctI	GAATGC	1 cut(s)	1138
PdiI	GCCGGC	2 cut(s)	1657, 1678
PfeI	GAWTC	8 cut(s)	76, 281, 292, 765, 953, 1380, 1867, 1880
PflMI	CCANNNNNTGG	1 cut(s)	499
PinAI	ACCGGT	2 cut(s)	64, 1841
PkrI	GCNGC	7 cut(s)	7, 576, 609, 733, 1682, 1691, 1774
PluTI	GGCGCC	1 cut(s)	219
Ppu21I	YACGTR	1 cut(s)	983
PpuMI	RGGWCCY	3 cut(s)	43, 83, 1223
Psp5II	RGGWCCY	3 cut(s)	43, 83, 1223
Psp6I	CCWGG	3 cut(s)	718, 1527, 1624
PspGI	CCWGG	3 cut(s)	718, 1527, 1624
PspN4I	GGNNCC	9 cut(s)	44, 58, 84, 85, 217, 504, 1225, 1287, 1915
PspPI	GGNCC	8 cut(s)	43, 57, 83, 166, 799, 997, 1223, 1736
PspPPI	RGGWCCY	3 cut(s)	43, 83, 1223
PstI	CTGCAG	1 cut(s)	1459
PsuI	RGATCY	2 cut(s)	1203, 1285
RsaI	GTAC	2 cut(s)	477, 584
RsaNI	GTAC	2 cut(s)	476, 583
RseI	CAYNNNNRTG	2 cut(s)	973, 1893
Rsr2I	CGGWCCG	1 cut(s)	799
RsrII	CGGWCCG	1 cut(s)	799
SalI	GTCGAC	1 cut(s)	1921
SapI	GCTCTTC	1 cut(s)	1598
SaqAI	TTAA	5 cut(s)	416, 677, 992, 1256, 1464
SatI	GCNGC	7 cut(s)	6, 575, 608, 732, 1681, 1690, 1773
Sau3AI	GATC	8 cut(s)	138, 202, 271, 1063, 1203, 1285, 1537, 1858
Sau96I	GGNCC	8 cut(s)	43, 57, 83, 166, 799, 997, 1223, 1736
ScrFI	CCNGG	7 cut(s)	30, 81, 176, 720, 1529, 1626, 1918
SduI	GDGCHC	4 cut(s)	507, 635, 982, 1610
SfaNI	GCATC	6 cut(s)	274, 295, 478, 527, 871, 1158
SfcI	CTRYAG	1 cut(s)	1455
SfiI	GGCCNNNNNGGCC	1 cut(s)	164
SfoI	GGCGCC	1 cut(s)	217
SinI	GGWCC	6 cut(s)	43, 83, 799, 997, 1223, 1736
SmiI	ATTTAAAT	1 cut(s)	1257
SmiMI	CAYNNNNRTG	2 cut(s)	973, 1893
SmlI	CTYRAG	1 cut(s)	1208
SmoI	CTYRAG	1 cut(s)	1208
Sse9I	AATT	9 cut(s)	193, 206, 260, 364, 593, 1040, 1368, 1649, 1660
SspDI	GGCGCC	1 cut(s)	215
SspMI	CTAG	1 cut(s)	543
StyD4I	CCNGG	7 cut(s)	28, 79, 174, 718, 1527, 1624, 1916
StyI	CCWWGG	1 cut(s)	1445
SwaI	ATTTAAAT	1 cut(s)	1257
TaaI	ACNGT	4 cut(s)	475, 1750, 1892, 1948
TaiI	ACGT	3 cut(s)	605, 985, 1839
TasI	AATT	9 cut(s)	193, 206, 260, 364, 593, 1040, 1368, 1649, 1660
TauI	GCSGC	3 cut(s)	8, 1692, 1775
TfiI	GAWTC	8 cut(s)	76, 281, 292, 765, 953, 1380, 1867, 1880
Tru1I	TTAA	5 cut(s)	416, 677, 992, 1256, 1464
Tru9I	TTAA	5 cut(s)	416, 677, 992, 1256, 1464
TscAI	CASTG	3 cut(s)	1440, 1755, 1895
TseFI	GTSAC	4 cut(s)	469, 1501, 1837, 1886
TseI	GCWGC	4 cut(s)	574, 607, 731, 1680
Tsp45I	GTSAC	4 cut(s)	469, 1501, 1837, 1886
TspDTI	ATGAA	7 cut(s)	495, 684, 783, 945, 1145, 1284, 1380
TspGWI	ACGGA	2 cut(s)	10, 1512
TspRI	CASTG	3 cut(s)	1440, 1755, 1895
Van91I	CCANNNNNTGG	1 cut(s)	499
VpaK11BI	GGWCC	6 cut(s)	43, 83, 799, 997, 1223, 1736
XapI	RAATTY	2 cut(s)	593, 1649
XceI	RCATGY	1 cut(s)	1312
XmiI	GTMKAC	1 cut(s)	1922
XspI	CTAG	1 cut(s)	543
Zsp2I	ATGCAT	3 cut(s)	886, 1173, 1551

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.