No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr1g0325521 RchiOBHm_Chr1g0337951 RchiOBHm_Chr2g0166631 RchiOBHm_Chr3g0479841 RchiOBHm_Chr4g0392621 RchiOBHm_Chr4g0397291 RchiOBHm_Chr4g0400561 RchiOBHm_Chr4g0418031 RchiOBHm_Chr5g0048041 RchiOBHm_Chr5g0079221 RchiOBHm_Chr6g0251371 RchiOBHm_Chr6g0257241 RchiOBHm_Chr7g0222971 RchiOBHm_Chr7g0241581 |
| rosa_laevigata | RLG00000034139 |
| rosa_multiflora | Rmu_sc0001029.1_g000028 Rmu_sc0002286.1_g000013 |
| rosa_roxburghii | Rroxscaffold_1G00036370 Rroxscaffold_5G00354060 Rroxscaffold_7G00195570 |
| rosa_samantha | Rh4AG016700 Rh4CG000200 Rh5AG299800 Rh5DG316500 Rh6AG127600 Rh7AG017800 |
| rosa_wichuraiana | Rw3G019640 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 177 |
| AciI | CCGC | 2 cut(s) | 290, 332 |
| AfaI | GTAC | 1 cut(s) | 270 |
| AgsI | TTSAA | 2 cut(s) | 14, 279 |
| AluBI | AGCT | 1 cut(s) | 237 |
| AluI | AGCT | 1 cut(s) | 237 |
| ApeKI | GCWGC | 1 cut(s) | 145 |
| AseI | ATTAAT | 2 cut(s) | 78, 140 |
| AsuC2I | CCSGG | 1 cut(s) | 266 |
| BbvI | GCAGC | 1 cut(s) | 132 |
| BcnI | CCSGG | 1 cut(s) | 266 |
| BisI | GCNGC | 1 cut(s) | 146 |
| BlsI | GCNGC | 1 cut(s) | 147 |
| Bme1390I | CCNGG | 1 cut(s) | 266 |
| BmrFI | CCNGG | 1 cut(s) | 266 |
| BmrI | ACTGGG | 1 cut(s) | 251 |
| BmuI | ACTGGG | 1 cut(s) | 251 |
| BpuEI | CTTGAG | 1 cut(s) | 190 |
| BpuMI | CCSGG | 1 cut(s) | 266 |
| Bse1I | ACTGG | 1 cut(s) | 246 |
| BseNI | ACTGG | 1 cut(s) | 246 |
| BseXI | GCAGC | 1 cut(s) | 132 |
| BsiSI | CCGG | 1 cut(s) | 266 |
| Bsp143I | GATC | 1 cut(s) | 325 |
| BspACI | CCGC | 2 cut(s) | 290, 332 |
| BsrI | ACTGG | 1 cut(s) | 246 |
| BssMI | GATC | 1 cut(s) | 325 |
| Bst4CI | ACNGT | 1 cut(s) | 204 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 54, 116 |
| BstC8I | GCNNGC | 1 cut(s) | 108 |
| BstKTI | GATC | 1 cut(s) | 328 |
| BstMBI | GATC | 1 cut(s) | 325 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 54, 116 |
| BstNSI | RCATGY | 2 cut(s) | 52, 114 |
| BstSCI | CCNGG | 1 cut(s) | 264 |
| BstV1I | GCAGC | 1 cut(s) | 132 |
| BtsI | GCAGTG | 1 cut(s) | 328 |
| BtsIMutI | CAGTG | 1 cut(s) | 328 |
| Cac8I | GCNNGC | 1 cut(s) | 108 |
| Csp6I | GTAC | 1 cut(s) | 269 |
| CviAII | CATG | 2 cut(s) | 49, 111 |
| CviJI | RGCY | 2 cut(s) | 227, 237 |
| CviKI_1 | RGCY | 2 cut(s) | 227, 237 |
| CviQI | GTAC | 1 cut(s) | 269 |
| DpnI | GATC | 1 cut(s) | 327 |
| DpnII | GATC | 1 cut(s) | 325 |
| FaeI | CATG | 2 cut(s) | 52, 114 |
| FaiI | YATR | 8 cut(s) | 7, 18, 50, 75, 112, 137, 177, 191 |
| FatI | CATG | 2 cut(s) | 48, 110 |
| FauI | CCCGC | 1 cut(s) | 283 |
| Fnu4HI | GCNGC | 1 cut(s) | 146 |
| Fsp4HI | GCNGC | 1 cut(s) | 146 |
| GluI | GCNGC | 1 cut(s) | 146 |
| HapII | CCGG | 1 cut(s) | 266 |
| Hin1II | CATG | 2 cut(s) | 52, 114 |
| HindIII | AAGCTT | 1 cut(s) | 235 |
| HinfI | GANTC | 1 cut(s) | 313 |
| HpaII | CCGG | 1 cut(s) | 266 |
| Hpy166II | GTNNAC | 3 cut(s) | 166, 217, 271 |
| Hpy188I | TCNGA | 1 cut(s) | 318 |
| Hpy188III | TCNNGA | 1 cut(s) | 308 |
| Hpy8I | GTNNAC | 3 cut(s) | 166, 217, 271 |
| HpyAV | CCTTC | 1 cut(s) | 16 |
| HpyCH4III | ACNGT | 1 cut(s) | 204 |
| HpyCH4V | TGCA | 3 cut(s) | 86, 148, 259 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 54, 116 |
| Hsp92II | CATG | 2 cut(s) | 52, 114 |
| Kzo9I | GATC | 1 cut(s) | 325 |
| LpnPI | CCDG | 4 cut(s) | 227, 279, 288, 293 |
| Lsp1109I | GCAGC | 1 cut(s) | 132 |
| MaeIII | GTNAC | 1 cut(s) | 185 |
| MalI | GATC | 1 cut(s) | 327 |
| MboI | GATC | 1 cut(s) | 325 |
| MluCI | AATT | 3 cut(s) | 181, 260, 280 |
| MseI | TTAA | 3 cut(s) | 60, 78, 140 |
| MslI | CAYNNNNRTG | 2 cut(s) | 78, 140 |
| MspI | CCGG | 1 cut(s) | 266 |
| MspR9I | CCNGG | 1 cut(s) | 266 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 54, 116 |
| NciI | CCSGG | 1 cut(s) | 266 |
| NdeII | GATC | 1 cut(s) | 325 |
| NlaIII | CATG | 2 cut(s) | 52, 114 |
| NspI | RCATGY | 2 cut(s) | 52, 114 |
| PfeI | GAWTC | 1 cut(s) | 313 |
| PkrI | GCNGC | 1 cut(s) | 147 |
| PshBI | ATTAAT | 2 cut(s) | 78, 140 |
| PsiI | TTATAA | 1 cut(s) | 177 |
| RsaI | GTAC | 1 cut(s) | 270 |
| RsaNI | GTAC | 1 cut(s) | 269 |
| RseI | CAYNNNNRTG | 2 cut(s) | 78, 140 |
| SaqAI | TTAA | 3 cut(s) | 60, 78, 140 |
| SatI | GCNGC | 1 cut(s) | 146 |
| Sau3AI | GATC | 1 cut(s) | 325 |
| ScrFI | CCNGG | 1 cut(s) | 266 |
| SetI | ASST | 3 cut(s) | 27, 239, 307 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 78, 140 |
| SmlI | CTYRAG | 1 cut(s) | 169 |
| SmoI | CTYRAG | 1 cut(s) | 169 |
| Sse9I | AATT | 3 cut(s) | 181, 260, 280 |
| SsiI | CCGC | 2 cut(s) | 290, 332 |
| SspI | AATATT | 2 cut(s) | 90, 152 |
| StyD4I | CCNGG | 1 cut(s) | 264 |
| TaaI | ACNGT | 1 cut(s) | 204 |
| TasI | AATT | 3 cut(s) | 181, 260, 280 |
| TfiI | GAWTC | 1 cut(s) | 313 |
| Tru1I | TTAA | 3 cut(s) | 60, 78, 140 |
| Tru9I | TTAA | 3 cut(s) | 60, 78, 140 |
| TscAI | CASTG | 1 cut(s) | 328 |
| TseI | GCWGC | 1 cut(s) | 145 |
| TspRI | CASTG | 1 cut(s) | 328 |
| VspI | ATTAAT | 2 cut(s) | 78, 140 |
| XceI | RCATGY | 2 cut(s) | 52, 114 |