Peptide chain release factor
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G57190 |
| fragaria_vesca | FvH4_4g12020 FvH4_4g12020 |
| prunus_persica | Prupe.7G049700_v2.0.a1 Prupe.7G049700_v2.0.a1 Prupe.7G049700_v2.0.a1 |
| pyrus_communis | pycom12g07340 |
| rosa_chinensis | RchiOBHm_Chr1g0343471 RchiOBHm_Chr2g0168541 RchiOBHm_Chr4g0409641 RchiOBHm_Chr5g0045081 RchiOBHm_Chr5g0071051 RchiOBHm_Chr6g0273161 RchiOBHm_Chr7g0240011 |
| rosa_laevigata | RLG00000008537 |
| rosa_multiflora | Rmu_sc0000652.1_g000001 Rmu_sc0002310.1_g000022 Rmu_sc0015305.1_g000010 Rmu_sc0015338.1_g000005 Rmu_sc0018973.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00354180 |
| rosa_rugosa | Rorug04G0095700 Rorug04G0095800 Rorug05G0498600 |
| rosa_samantha | Rh2BG617100 Rh2CG585200 Rh3DG274500 Rh4AG157300 Rh4BG156900 Rh4CG024300 Rh4CG167500 Rh4DG151200 Rh4DG161700 Rh5BG221000 Rh5BG274800 Rh5BG309900 Rh5CG332800 Rh5DG283000 Rh5DG320400 |
| rosa_wichuraiana | Rw0G003500 Rw2G050080 Rw3G022130 Rw4G012870 Rw4G012980 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 66 |
| AcuI | CTGAAG | 1 cut(s) | 192 |
| AflII | CTTAAG | 1 cut(s) | 299 |
| AgsI | TTSAA | 2 cut(s) | 29, 274 |
| AluBI | AGCT | 2 cut(s) | 25, 295 |
| AluI | AGCT | 2 cut(s) | 25, 295 |
| Alw26I | GTCTC | 1 cut(s) | 147 |
| AoxI | GGCC | 1 cut(s) | 6 |
| AspS9I | GGNCC | 2 cut(s) | 7, 305 |
| AvaII | GGWCC | 1 cut(s) | 305 |
| BcoDI | GTCTC | 1 cut(s) | 147 |
| BfrI | CTTAAG | 1 cut(s) | 299 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 14, 119 |
| Bme18I | GGWCC | 1 cut(s) | 305 |
| BmgT120I | GGNCC | 2 cut(s) | 7, 305 |
| BmiI | GGNNCC | 2 cut(s) | 9, 306 |
| BmsI | GCATC | 3 cut(s) | 133, 199, 235 |
| BpmI | CTGGAG | 1 cut(s) | 41 |
| BsaBI | GATNNNNATC | 1 cut(s) | 249 |
| Bse1I | ACTGG | 1 cut(s) | 24 |
| Bse8I | GATNNNNATC | 1 cut(s) | 249 |
| BseGI | GGATG | 1 cut(s) | 88 |
| BseJI | GATNNNNATC | 1 cut(s) | 249 |
| BseMII | CTCAG | 2 cut(s) | 84, 163 |
| BseNI | ACTGG | 1 cut(s) | 24 |
| Bsh1236I | CGCG | 1 cut(s) | 66 |
| BshFI | GGCC | 1 cut(s) | 8 |
| BsmAI | GTCTC | 1 cut(s) | 147 |
| BsnI | GGCC | 1 cut(s) | 8 |
| BspANI | GGCC | 1 cut(s) | 8 |
| BspCNI | CTCAG | 2 cut(s) | 85, 162 |
| BspFNI | CGCG | 1 cut(s) | 66 |
| BspLI | GGNNCC | 2 cut(s) | 9, 306 |
| BspTI | CTTAAG | 1 cut(s) | 299 |
| BsrI | ACTGG | 1 cut(s) | 24 |
| Bst4CI | ACNGT | 1 cut(s) | 195 |
| BstAFI | CTTAAG | 1 cut(s) | 299 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 245 |
| BstDEI | CTNAG | 2 cut(s) | 93, 149 |
| BstF5I | GGATG | 1 cut(s) | 88 |
| BstFNI | CGCG | 1 cut(s) | 66 |
| BstMAI | GTCTC | 1 cut(s) | 147 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 14, 119, 176, 245 |
| BstUI | CGCG | 1 cut(s) | 66 |
| BsuRI | GGCC | 1 cut(s) | 8 |
| BtsCI | GGATG | 1 cut(s) | 88 |
| BtsI | GCAGTG | 1 cut(s) | 87 |
| BtsIMutI | CAGTG | 2 cut(s) | 17, 87 |
| Cfr13I | GGNCC | 2 cut(s) | 7, 305 |
| CviJI | RGCY | 6 cut(s) | 8, 25, 122, 170, 226, 295 |
| CviKI_1 | RGCY | 6 cut(s) | 8, 25, 122, 170, 226, 295 |
| DdeI | CTNAG | 2 cut(s) | 93, 149 |
| Eco47I | GGWCC | 1 cut(s) | 305 |
| Eco57I | CTGAAG | 1 cut(s) | 192 |
| EcoT22I | ATGCAT | 1 cut(s) | 250 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 168, 200 |
| FauNDI | CATATG | 1 cut(s) | 241 |
| FokI | GGATG | 1 cut(s) | 95 |
| GsuI | CTGGAG | 1 cut(s) | 41 |
| HaeIII | GGCC | 1 cut(s) | 8 |
| HindIII | AAGCTT | 1 cut(s) | 293 |
| HinfI | GANTC | 1 cut(s) | 95 |
| Hpy188I | TCNGA | 1 cut(s) | 152 |
| Hpy188III | TCNNGA | 1 cut(s) | 254 |
| HpyAV | CCTTC | 1 cut(s) | 229 |
| HpyCH4III | ACNGT | 1 cut(s) | 195 |
| HpyCH4V | TGCA | 1 cut(s) | 248 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 14, 119, 176, 245 |
| HpyF3I | CTNAG | 2 cut(s) | 93, 149 |
| LmnI | GCTCC | 1 cut(s) | 22 |
| LpnPI | CCDG | 3 cut(s) | 5, 64, 239 |
| LweI | GCATC | 3 cut(s) | 133, 199, 235 |
| MboII | GAAGA | 3 cut(s) | 41, 44, 185 |
| MluCI | AATT | 2 cut(s) | 116, 217 |
| MlyI | GAGTC | 1 cut(s) | 104 |
| MnlI | CCTC | 2 cut(s) | 86, 97 |
| Mph1103I | ATGCAT | 1 cut(s) | 250 |
| MseI | TTAA | 1 cut(s) | 300 |
| MspCI | CTTAAG | 1 cut(s) | 299 |
| MvnI | CGCG | 1 cut(s) | 66 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 14, 119, 176, 245 |
| NdeI | CATATG | 1 cut(s) | 241 |
| NlaIV | GGNNCC | 2 cut(s) | 9, 306 |
| NsiI | ATGCAT | 1 cut(s) | 250 |
| PleI | GAGTC | 1 cut(s) | 103 |
| PpsI | GAGTC | 1 cut(s) | 103 |
| PspN4I | GGNNCC | 2 cut(s) | 9, 306 |
| PspPI | GGNCC | 2 cut(s) | 7, 305 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 45, 77 |
| SaqAI | TTAA | 1 cut(s) | 300 |
| Sau96I | GGNCC | 2 cut(s) | 7, 305 |
| SchI | GAGTC | 1 cut(s) | 104 |
| SetI | ASST | 4 cut(s) | 27, 78, 108, 297 |
| SfaNI | GCATC | 3 cut(s) | 133, 199, 235 |
| SinI | GGWCC | 1 cut(s) | 305 |
| SmlI | CTYRAG | 1 cut(s) | 299 |
| SmoI | CTYRAG | 1 cut(s) | 299 |
| Sse9I | AATT | 2 cut(s) | 116, 217 |
| TaaI | ACNGT | 1 cut(s) | 195 |
| TasI | AATT | 2 cut(s) | 116, 217 |
| Tru1I | TTAA | 1 cut(s) | 300 |
| Tru9I | TTAA | 1 cut(s) | 300 |
| TscAI | CASTG | 2 cut(s) | 24, 94 |
| TspGWI | ACGGA | 1 cut(s) | 55 |
| TspRI | CASTG | 2 cut(s) | 24, 94 |
| Vha464I | CTTAAG | 1 cut(s) | 299 |
| VpaK11BI | GGWCC | 1 cut(s) | 305 |
| Zsp2I | ATGCAT | 1 cut(s) | 250 |