Protein AUXIN SIGNALING F-BOX
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000000868 |
| rosa_multiflora | Rmu_sc0002933.1_g000011 Rmu_sc0003707.1_g000002 Rmu_sc0004180.1_g000020 Rmu_sc0008558.1_g000002 Rmu_sc0030499.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00057770 Rroxscaffold_4G00303260 Rroxscaffold_4G00323430 |
| rosa_rugosa | Rorug02G0301700 |
| rosa_samantha | Rh2AG433000 Rh2AG531900 Rh2CG367300 Rh3AG285900 Rh3AG292900 Rh4AG110800 Rh7AG458200 |
| rosa_wichuraiana | Rw3G023850 Rw3G029550 Rw4G003450 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 70 |
| AgsI | TTSAA | 2 cut(s) | 284, 329 |
| AjnI | CCWGG | 1 cut(s) | 56 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 249, 281 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 261, 293 |
| AluBI | AGCT | 2 cut(s) | 96, 221 |
| AluI | AGCT | 2 cut(s) | 96, 221 |
| Alw26I | GTCTC | 1 cut(s) | 34 |
| AoxI | GGCC | 1 cut(s) | 118 |
| ApeKI | GCWGC | 2 cut(s) | 96, 134 |
| ApoI | RAATTY | 1 cut(s) | 70 |
| AspS9I | GGNCC | 1 cut(s) | 189 |
| AvaII | GGWCC | 1 cut(s) | 189 |
| BbvI | GCAGC | 2 cut(s) | 83, 121 |
| BccI | CCATC | 2 cut(s) | 110, 242 |
| BciT130I | CCWGG | 1 cut(s) | 58 |
| BclI | TGATCA | 1 cut(s) | 225 |
| BcoDI | GTCTC | 1 cut(s) | 34 |
| BisI | GCNGC | 2 cut(s) | 97, 135 |
| BlsI | GCNGC | 2 cut(s) | 98, 136 |
| Bme1390I | CCNGG | 1 cut(s) | 58 |
| Bme18I | GGWCC | 1 cut(s) | 189 |
| BmgT120I | GGNCC | 1 cut(s) | 189 |
| BmiI | GGNNCC | 1 cut(s) | 190 |
| BmrFI | CCNGG | 1 cut(s) | 58 |
| BpmI | CTGGAG | 1 cut(s) | 180 |
| BpuEI | CTTGAG | 1 cut(s) | 65 |
| BsaI | GGTCTC | 1 cut(s) | 34 |
| BseBI | CCWGG | 1 cut(s) | 58 |
| BseGI | GGATG | 1 cut(s) | 234 |
| BseMII | CTCAG | 1 cut(s) | 195 |
| BseXI | GCAGC | 2 cut(s) | 83, 121 |
| BshFI | GGCC | 1 cut(s) | 120 |
| BslFI | GGGAC | 2 cut(s) | 202, 293 |
| BsmAI | GTCTC | 1 cut(s) | 34 |
| BsmFI | GGGAC | 2 cut(s) | 202, 293 |
| BsmI | GAATGC | 1 cut(s) | 107 |
| BsnI | GGCC | 1 cut(s) | 120 |
| Bso31I | GGTCTC | 1 cut(s) | 34 |
| Bsp143I | GATC | 1 cut(s) | 225 |
| BspANI | GGCC | 1 cut(s) | 120 |
| BspCNI | CTCAG | 1 cut(s) | 196 |
| BspLI | GGNNCC | 1 cut(s) | 190 |
| BspTNI | GGTCTC | 1 cut(s) | 34 |
| BssMI | GATC | 1 cut(s) | 225 |
| Bst2UI | CCWGG | 1 cut(s) | 58 |
| Bst4CI | ACNGT | 3 cut(s) | 197, 315, 342 |
| Bst6I | CTCTTC | 1 cut(s) | 237 |
| BstDEI | CTNAG | 1 cut(s) | 204 |
| BstF5I | GGATG | 1 cut(s) | 234 |
| BstKTI | GATC | 1 cut(s) | 228 |
| BstMAI | GTCTC | 1 cut(s) | 34 |
| BstMBI | GATC | 1 cut(s) | 225 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 102, 134 |
| BstNI | CCWGG | 1 cut(s) | 58 |
| BstSCI | CCNGG | 1 cut(s) | 56 |
| BstV1I | GCAGC | 2 cut(s) | 83, 121 |
| BsuRI | GGCC | 1 cut(s) | 120 |
| BtsCI | GGATG | 1 cut(s) | 234 |
| BtsI | GCAGTG | 2 cut(s) | 123, 228 |
| BtsIMutI | CAGTG | 3 cut(s) | 111, 123, 228 |
| Cfr13I | GGNCC | 1 cut(s) | 189 |
| CviJI | RGCY | 4 cut(s) | 13, 96, 120, 221 |
| CviKI_1 | RGCY | 4 cut(s) | 13, 96, 120, 221 |
| DdeI | CTNAG | 1 cut(s) | 204 |
| DpnI | GATC | 1 cut(s) | 227 |
| DpnII | GATC | 1 cut(s) | 225 |
| Eam1104I | CTCTTC | 1 cut(s) | 237 |
| EarI | CTCTTC | 1 cut(s) | 237 |
| Eco31I | GGTCTC | 1 cut(s) | 34 |
| Eco47I | GGWCC | 1 cut(s) | 189 |
| EcoRII | CCWGG | 1 cut(s) | 56 |
| FaiI | YATR | 3 cut(s) | 201, 297, 305 |
| FaqI | GGGAC | 2 cut(s) | 202, 293 |
| FbaI | TGATCA | 1 cut(s) | 225 |
| Fnu4HI | GCNGC | 2 cut(s) | 97, 135 |
| FokI | GGATG | 1 cut(s) | 221 |
| Fsp4HI | GCNGC | 2 cut(s) | 97, 135 |
| GluI | GCNGC | 2 cut(s) | 97, 135 |
| GsuI | CTGGAG | 1 cut(s) | 180 |
| HaeIII | GGCC | 1 cut(s) | 120 |
| HinfI | GANTC | 2 cut(s) | 147, 155 |
| Hpy188I | TCNGA | 2 cut(s) | 34, 69 |
| Hpy188III | TCNNGA | 3 cut(s) | 16, 159, 254 |
| HpyAV | CCTTC | 1 cut(s) | 332 |
| HpyCH4III | ACNGT | 3 cut(s) | 197, 315, 342 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 102, 134 |
| HpyF3I | CTNAG | 1 cut(s) | 204 |
| Ksp22I | TGATCA | 1 cut(s) | 225 |
| Kzo9I | GATC | 1 cut(s) | 225 |
| LpnPI | CCDG | 5 cut(s) | 43, 70, 144, 165, 239 |
| Lsp1109I | GCAGC | 2 cut(s) | 83, 121 |
| MalI | GATC | 1 cut(s) | 227 |
| MboI | GATC | 1 cut(s) | 225 |
| MboII | GAAGA | 3 cut(s) | 254, 272, 317 |
| MluCI | AATT | 3 cut(s) | 70, 139, 298 |
| MnlI | CCTC | 1 cut(s) | 131 |
| MseI | TTAA | 1 cut(s) | 75 |
| MspR9I | CCNGG | 1 cut(s) | 58 |
| Mva1269I | GAATGC | 1 cut(s) | 107 |
| MvaI | CCWGG | 1 cut(s) | 58 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 102, 134 |
| NdeII | GATC | 1 cut(s) | 225 |
| NlaIV | GGNNCC | 1 cut(s) | 190 |
| PctI | GAATGC | 1 cut(s) | 107 |
| PfeI | GAWTC | 2 cut(s) | 147, 155 |
| PkrI | GCNGC | 2 cut(s) | 98, 136 |
| Psp6I | CCWGG | 1 cut(s) | 56 |
| PspGI | CCWGG | 1 cut(s) | 56 |
| PspN4I | GGNNCC | 1 cut(s) | 190 |
| PspPI | GGNCC | 1 cut(s) | 189 |
| SaqAI | TTAA | 1 cut(s) | 75 |
| SatI | GCNGC | 2 cut(s) | 97, 135 |
| Sau3AI | GATC | 1 cut(s) | 225 |
| Sau96I | GGNCC | 1 cut(s) | 189 |
| ScrFI | CCNGG | 1 cut(s) | 58 |
| SetI | ASST | 3 cut(s) | 62, 98, 223 |
| SgeI | CNNG | 9 cut(s) | 28, 56, 69, 70, 101, 171, 192, 251, 266 |
| SinI | GGWCC | 1 cut(s) | 189 |
| SmlI | CTYRAG | 2 cut(s) | 14, 44 |
| SmoI | CTYRAG | 2 cut(s) | 14, 44 |
| Sse9I | AATT | 3 cut(s) | 70, 139, 298 |
| StyD4I | CCNGG | 1 cut(s) | 56 |
| TaaI | ACNGT | 3 cut(s) | 197, 315, 342 |
| TasI | AATT | 3 cut(s) | 70, 139, 298 |
| TfiI | GAWTC | 2 cut(s) | 147, 155 |
| Tru1I | TTAA | 1 cut(s) | 75 |
| Tru9I | TTAA | 1 cut(s) | 75 |
| TscAI | CASTG | 3 cut(s) | 118, 130, 235 |
| TseI | GCWGC | 2 cut(s) | 96, 134 |
| TspDTI | ATGAA | 3 cut(s) | 51, 139, 292 |
| TspRI | CASTG | 3 cut(s) | 118, 130, 235 |
| VpaK11BI | GGWCC | 1 cut(s) | 189 |
| XapI | RAATTY | 1 cut(s) | 70 |