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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000000868 |
| rosa_multiflora | Rmu_sc0002933.1_g000011 Rmu_sc0003707.1_g000002 Rmu_sc0004180.1_g000020 Rmu_sc0008558.1_g000002 Rmu_sc0030499.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00057770 Rroxscaffold_4G00303260 Rroxscaffold_4G00323430 |
| rosa_rugosa | Rorug02G0301700 |
| rosa_samantha | Rh2AG433000 Rh2AG531900 Rh2CG367300 Rh3AG285900 Rh3AG292900 Rh4AG110800 Rh7AG458200 |
| rosa_wichuraiana | Rw3G023850 Rw3G029550 Rw4G003450 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 62 |
| AciI | CCGC | 7 cut(s) | 62, 126, 176, 192, 248, 280, 302 |
| AclWI | GGATC | 2 cut(s) | 250, 290 |
| AcoI | YGGCCR | 1 cut(s) | 139 |
| AfaI | GTAC | 1 cut(s) | 105 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 148, 254, 257 |
| AlwI | GGATC | 2 cut(s) | 250, 290 |
| AoxI | GGCC | 1 cut(s) | 139 |
| ApeKI | GCWGC | 1 cut(s) | 226 |
| AspLEI | GCGC | 2 cut(s) | 205, 267 |
| AspS9I | GGNCC | 1 cut(s) | 74 |
| AvaII | GGWCC | 1 cut(s) | 74 |
| BbvI | GCAGC | 1 cut(s) | 213 |
| BccI | CCATC | 1 cut(s) | 114 |
| BceAI | ACGGC | 2 cut(s) | 96, 252 |
| BglII | AGATCT | 1 cut(s) | 81 |
| BisI | GCNGC | 5 cut(s) | 63, 127, 177, 227, 248 |
| BlsI | GCNGC | 5 cut(s) | 64, 128, 178, 228, 249 |
| Bme18I | GGWCC | 1 cut(s) | 74 |
| BmgT120I | GGNCC | 1 cut(s) | 74 |
| BmiI | GGNNCC | 1 cut(s) | 110 |
| BmsI | GCATC | 2 cut(s) | 121, 285 |
| BsaJI | CCNNGG | 1 cut(s) | 142 |
| BsaWI | WCCGGW | 1 cut(s) | 76 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 15, 45, 100, 130 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 148, 254, 257 |
| Bse118I | RCCGGY | 1 cut(s) | 250 |
| BseDI | CCNNGG | 1 cut(s) | 142 |
| BseGI | GGATG | 1 cut(s) | 125 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 148, 254, 257 |
| BseRI | GAGGAG | 1 cut(s) | 25 |
| BseXI | GCAGC | 1 cut(s) | 213 |
| BshFI | GGCC | 1 cut(s) | 141 |
| BsiSI | CCGG | 3 cut(s) | 21, 77, 251 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 148, 254, 257 |
| BsnI | GGCC | 1 cut(s) | 141 |
| Bsp143I | GATC | 5 cut(s) | 81, 88, 153, 242, 282 |
| Bsp19I | CCATGG | 1 cut(s) | 142 |
| BspACI | CCGC | 7 cut(s) | 62, 126, 176, 192, 248, 280, 302 |
| BspANI | GGCC | 1 cut(s) | 141 |
| BspLI | GGNNCC | 1 cut(s) | 110 |
| BspPI | GGATC | 2 cut(s) | 250, 290 |
| BsrBI | CCGCTC | 1 cut(s) | 62 |
| BsrFI | RCCGGY | 1 cut(s) | 250 |
| BssAI | RCCGGY | 1 cut(s) | 250 |
| BssECI | CCNNGG | 1 cut(s) | 142 |
| BssMI | GATC | 5 cut(s) | 81, 88, 153, 242, 282 |
| BssT1I | CCWWGG | 1 cut(s) | 142 |
| Bst4CI | ACNGT | 1 cut(s) | 211 |
| Bst6I | CTCTTC | 1 cut(s) | 321 |
| BstC8I | GCNNGC | 3 cut(s) | 174, 300, 304 |
| BstDSI | CCRYGG | 1 cut(s) | 142 |
| BstF5I | GGATG | 1 cut(s) | 125 |
| BstHHI | GCGC | 2 cut(s) | 205, 267 |
| BstKTI | GATC | 5 cut(s) | 84, 91, 156, 245, 285 |
| BstMBI | GATC | 5 cut(s) | 81, 88, 153, 242, 282 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 271 |
| BstV1I | GCAGC | 1 cut(s) | 213 |
| BstX2I | RGATCY | 1 cut(s) | 81 |
| BstYI | RGATCY | 1 cut(s) | 81 |
| BsuRI | GGCC | 1 cut(s) | 141 |
| BtgI | CCRYGG | 1 cut(s) | 142 |
| BtgZI | GCGATG | 1 cut(s) | 144 |
| BtsCI | GGATG | 1 cut(s) | 125 |
| Cac8I | GCNNGC | 3 cut(s) | 174, 300, 304 |
| CfoI | GCGC | 2 cut(s) | 205, 267 |
| Cfr10I | RCCGGY | 1 cut(s) | 250 |
| Cfr13I | GGNCC | 1 cut(s) | 74 |
| Csp6I | GTAC | 1 cut(s) | 104 |
| CviAII | CATG | 1 cut(s) | 143 |
| CviJI | RGCY | 5 cut(s) | 20, 111, 141, 226, 327 |
| CviKI_1 | RGCY | 5 cut(s) | 20, 111, 141, 226, 327 |
| CviQI | GTAC | 1 cut(s) | 104 |
| DpnI | GATC | 5 cut(s) | 83, 90, 155, 244, 284 |
| DpnII | GATC | 5 cut(s) | 81, 88, 153, 242, 282 |
| EaeI | YGGCCR | 1 cut(s) | 139 |
| Eam1104I | CTCTTC | 1 cut(s) | 321 |
| EarI | CTCTTC | 1 cut(s) | 321 |
| Eco130I | CCWWGG | 1 cut(s) | 142 |
| Eco47I | GGWCC | 1 cut(s) | 74 |
| EcoT14I | CCWWGG | 1 cut(s) | 142 |
| ErhI | CCWWGG | 1 cut(s) | 142 |
| FaeI | CATG | 1 cut(s) | 146 |
| FaiI | YATR | 1 cut(s) | 144 |
| FatI | CATG | 1 cut(s) | 142 |
| FauI | CCCGC | 1 cut(s) | 295 |
| Fnu4HI | GCNGC | 5 cut(s) | 63, 127, 177, 227, 248 |
| FokI | GGATG | 1 cut(s) | 132 |
| Fsp4HI | GCNGC | 5 cut(s) | 63, 127, 177, 227, 248 |
| GlaI | GCGC | 2 cut(s) | 204, 266 |
| GluI | GCNGC | 5 cut(s) | 63, 127, 177, 227, 248 |
| HaeIII | GGCC | 1 cut(s) | 141 |
| HapII | CCGG | 3 cut(s) | 21, 77, 251 |
| HhaI | GCGC | 2 cut(s) | 205, 267 |
| Hin1II | CATG | 1 cut(s) | 146 |
| Hin6I | GCGC | 2 cut(s) | 203, 265 |
| HinP1I | GCGC | 2 cut(s) | 203, 265 |
| HpaII | CCGG | 3 cut(s) | 21, 77, 251 |
| Hpy166II | GTNNAC | 1 cut(s) | 260 |
| Hpy188I | TCNGA | 3 cut(s) | 88, 221, 242 |
| Hpy8I | GTNNAC | 1 cut(s) | 260 |
| Hpy99I | CGWCG | 2 cut(s) | 35, 161 |
| HpyAV | CCTTC | 2 cut(s) | 161, 216 |
| HpyCH4III | ACNGT | 1 cut(s) | 211 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 271 |
| Hsp92II | CATG | 1 cut(s) | 146 |
| HspAI | GCGC | 2 cut(s) | 203, 265 |
| Kzo9I | GATC | 5 cut(s) | 81, 88, 153, 242, 282 |
| LmnI | GCTCC | 1 cut(s) | 108 |
| LpnPI | CCDG | 4 cut(s) | 34, 77, 90, 264 |
| Lsp1109I | GCAGC | 1 cut(s) | 213 |
| LweI | GCATC | 2 cut(s) | 121, 285 |
| MalI | GATC | 5 cut(s) | 83, 90, 155, 244, 284 |
| MbiI | CCGCTC | 1 cut(s) | 62 |
| MboI | GATC | 5 cut(s) | 81, 88, 153, 242, 282 |
| MboII | GAAGA | 1 cut(s) | 308 |
| MflI | RGATCY | 1 cut(s) | 81 |
| MmeI | TCCRAC | 1 cut(s) | 220 |
| MnlI | CCTC | 2 cut(s) | 3, 6 |
| MspI | CCGG | 3 cut(s) | 21, 77, 251 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 271 |
| NcoI | CCATGG | 1 cut(s) | 142 |
| NdeII | GATC | 5 cut(s) | 81, 88, 153, 242, 282 |
| NlaIII | CATG | 1 cut(s) | 146 |
| NlaIV | GGNNCC | 1 cut(s) | 110 |
| PkrI | GCNGC | 5 cut(s) | 64, 128, 178, 228, 249 |
| PspN4I | GGNNCC | 1 cut(s) | 110 |
| PspPI | GGNCC | 1 cut(s) | 74 |
| PsuI | RGATCY | 1 cut(s) | 81 |
| RsaI | GTAC | 1 cut(s) | 105 |
| RsaNI | GTAC | 1 cut(s) | 104 |
| SatI | GCNGC | 5 cut(s) | 63, 127, 177, 227, 248 |
| Sau3AI | GATC | 5 cut(s) | 81, 88, 153, 242, 282 |
| Sau96I | GGNCC | 1 cut(s) | 74 |
| SfaNI | GCATC | 2 cut(s) | 121, 285 |
| SgrAI | CRCCGGYG | 1 cut(s) | 250 |
| SinI | GGWCC | 1 cut(s) | 74 |
| SsiI | CCGC | 7 cut(s) | 62, 126, 176, 192, 248, 280, 302 |
| StyI | CCWWGG | 1 cut(s) | 142 |
| TaaI | ACNGT | 1 cut(s) | 211 |
| TaqI | TCGA | 2 cut(s) | 156, 319 |
| TauI | GCSGC | 4 cut(s) | 65, 129, 179, 250 |
| TseI | GCWGC | 1 cut(s) | 226 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspGWI | ACGGA | 3 cut(s) | 82, 121, 174 |
| VpaK11BI | GGWCC | 1 cut(s) | 74 |