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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000000868 |
| rosa_multiflora | Rmu_sc0002933.1_g000011 Rmu_sc0003707.1_g000002 Rmu_sc0004180.1_g000020 Rmu_sc0008558.1_g000002 Rmu_sc0030499.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00057770 Rroxscaffold_4G00303260 Rroxscaffold_4G00323430 |
| rosa_rugosa | Rorug02G0301700 |
| rosa_samantha | Rh2AG433000 Rh2AG531900 Rh2CG367300 Rh3AG285900 Rh3AG292900 Rh4AG110800 Rh7AG458200 |
| rosa_wichuraiana | Rw3G023850 Rw3G029550 Rw4G003450 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 46 |
| AciI | CCGC | 2 cut(s) | 38, 174 |
| AfaI | GTAC | 1 cut(s) | 144 |
| AflIII | ACRYGT | 1 cut(s) | 145 |
| AgsI | TTSAA | 4 cut(s) | 10, 92, 227, 272 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 17, 49, 192, 224 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 204, 236 |
| AluBI | AGCT | 3 cut(s) | 81, 111, 164 |
| AluI | AGCT | 3 cut(s) | 81, 111, 164 |
| Alw21I | GWGCWC | 1 cut(s) | 113 |
| Ama87I | CYCGRG | 1 cut(s) | 123 |
| Aor13HI | TCCGGA | 1 cut(s) | 46 |
| AoxI | GGCC | 1 cut(s) | 54 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 56 |
| AsuHPI | GGTGA | 2 cut(s) | 118, 163 |
| AvaI | CYCGRG | 1 cut(s) | 123 |
| BanII | GRGCYC | 1 cut(s) | 113 |
| BbsI | GAAGAC | 1 cut(s) | 99 |
| Bbv12I | GWGCWC | 1 cut(s) | 113 |
| BccI | CCATC | 1 cut(s) | 185 |
| BclI | TGATCA | 1 cut(s) | 168 |
| BfaI | CTAG | 1 cut(s) | 135 |
| BisI | GCNGC | 1 cut(s) | 39 |
| BlsI | GCNGC | 1 cut(s) | 40 |
| BmeT110I | CYCGRG | 1 cut(s) | 123 |
| BmrI | ACTGGG | 1 cut(s) | 111 |
| BmuI | ACTGGG | 1 cut(s) | 111 |
| BpiI | GAAGAC | 1 cut(s) | 99 |
| BsaWI | WCCGGW | 1 cut(s) | 46 |
| Bse1I | ACTGG | 1 cut(s) | 106 |
| BseAI | TCCGGA | 1 cut(s) | 46 |
| BseGI | GGATG | 2 cut(s) | 43, 177 |
| BseNI | ACTGG | 1 cut(s) | 106 |
| BshFI | GGCC | 1 cut(s) | 56 |
| BsiHKAI | GWGCWC | 1 cut(s) | 113 |
| BsiHKCI | CYCGRG | 1 cut(s) | 123 |
| BsiSI | CCGG | 1 cut(s) | 47 |
| BsnI | GGCC | 1 cut(s) | 56 |
| BsoBI | CYCGRG | 1 cut(s) | 123 |
| Bsp1286I | GDGCHC | 1 cut(s) | 113 |
| Bsp13I | TCCGGA | 1 cut(s) | 46 |
| Bsp1407I | TGTACA | 1 cut(s) | 142 |
| Bsp143I | GATC | 1 cut(s) | 168 |
| BspACI | CCGC | 2 cut(s) | 38, 174 |
| BspANI | GGCC | 1 cut(s) | 56 |
| BspEI | TCCGGA | 1 cut(s) | 46 |
| BsrGI | TGTACA | 1 cut(s) | 142 |
| BsrI | ACTGG | 1 cut(s) | 106 |
| BssMI | GATC | 1 cut(s) | 168 |
| Bst4CI | ACNGT | 1 cut(s) | 285 |
| Bst6I | CTCTTC | 1 cut(s) | 180 |
| BstAUI | TGTACA | 1 cut(s) | 142 |
| BstF5I | GGATG | 2 cut(s) | 43, 177 |
| BstKTI | GATC | 1 cut(s) | 171 |
| BstMBI | GATC | 1 cut(s) | 168 |
| BstV2I | GAAGAC | 1 cut(s) | 99 |
| BsuRI | GGCC | 1 cut(s) | 56 |
| BtsCI | GGATG | 2 cut(s) | 43, 177 |
| Csp6I | GTAC | 1 cut(s) | 143 |
| CviJI | RGCY | 5 cut(s) | 30, 56, 81, 111, 164 |
| CviKI_1 | RGCY | 5 cut(s) | 30, 56, 81, 111, 164 |
| CviQI | GTAC | 1 cut(s) | 143 |
| DpnI | GATC | 1 cut(s) | 170 |
| DpnII | GATC | 1 cut(s) | 168 |
| Eam1104I | CTCTTC | 1 cut(s) | 180 |
| EarI | CTCTTC | 1 cut(s) | 180 |
| Ecl136II | GAGCTC | 1 cut(s) | 111 |
| Eco147I | AGGCCT | 1 cut(s) | 56 |
| Eco24I | GRGCYC | 1 cut(s) | 113 |
| Eco53kI | GAGCTC | 1 cut(s) | 111 |
| Eco88I | CYCGRG | 1 cut(s) | 123 |
| EcoICRI | GAGCTC | 1 cut(s) | 111 |
| EcoT38I | GRGCYC | 1 cut(s) | 113 |
| FaiI | YATR | 3 cut(s) | 17, 240, 248 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 14, 46, 44, 76 |
| FbaI | TGATCA | 1 cut(s) | 168 |
| Fnu4HI | GCNGC | 1 cut(s) | 39 |
| FokI | GGATG | 2 cut(s) | 30, 164 |
| FriOI | GRGCYC | 1 cut(s) | 113 |
| Fsp4HI | GCNGC | 1 cut(s) | 39 |
| FspBI | CTAG | 1 cut(s) | 135 |
| GluI | GCNGC | 1 cut(s) | 39 |
| HaeIII | GGCC | 1 cut(s) | 56 |
| HapII | CCGG | 1 cut(s) | 47 |
| HinfI | GANTC | 2 cut(s) | 95, 121 |
| HpaII | CCGG | 1 cut(s) | 47 |
| HphI | GGTGA | 2 cut(s) | 118, 163 |
| Hpy166II | GTNNAC | 1 cut(s) | 145 |
| Hpy188I | TCNGA | 1 cut(s) | 154 |
| Hpy188III | TCNNGA | 5 cut(s) | 10, 47, 118, 125, 197 |
| Hpy8I | GTNNAC | 1 cut(s) | 145 |
| HpyAV | CCTTC | 3 cut(s) | 46, 67, 275 |
| HpyCH4III | ACNGT | 1 cut(s) | 285 |
| HpyCH4IV | ACGT | 1 cut(s) | 147 |
| HpySE526I | ACGT | 1 cut(s) | 147 |
| Kpn2I | TCCGGA | 1 cut(s) | 46 |
| Ksp22I | TGATCA | 1 cut(s) | 168 |
| Kzo9I | GATC | 1 cut(s) | 168 |
| LmnI | GCTCC | 1 cut(s) | 86 |
| LpnPI | CCDG | 3 cut(s) | 60, 87, 182 |
| MaeI | CTAG | 1 cut(s) | 135 |
| MaeII | ACGT | 1 cut(s) | 147 |
| MalI | GATC | 1 cut(s) | 170 |
| MboI | GATC | 1 cut(s) | 168 |
| MboII | GAAGA | 6 cut(s) | 52, 85, 104, 197, 215, 260 |
| MhlI | GDGCHC | 1 cut(s) | 113 |
| MluCI | AATT | 1 cut(s) | 241 |
| MlyI | GAGTC | 2 cut(s) | 89, 115 |
| MroI | TCCGGA | 1 cut(s) | 46 |
| MroXI | GAANNNNTTC | 1 cut(s) | 56 |
| MspI | CCGG | 1 cut(s) | 47 |
| NdeII | GATC | 1 cut(s) | 168 |
| PceI | AGGCCT | 1 cut(s) | 56 |
| PdmI | GAANNNNTTC | 1 cut(s) | 56 |
| PkrI | GCNGC | 1 cut(s) | 40 |
| PleI | GAGTC | 2 cut(s) | 89, 115 |
| PpsI | GAGTC | 2 cut(s) | 89, 115 |
| Psp124BI | GAGCTC | 1 cut(s) | 113 |
| RsaI | GTAC | 1 cut(s) | 144 |
| RsaNI | GTAC | 1 cut(s) | 143 |
| SacI | GAGCTC | 1 cut(s) | 113 |
| SatI | GCNGC | 1 cut(s) | 39 |
| Sau3AI | GATC | 1 cut(s) | 168 |
| SchI | GAGTC | 2 cut(s) | 89, 115 |
| SduI | GDGCHC | 1 cut(s) | 113 |
| SetI | ASST | 4 cut(s) | 83, 113, 150, 166 |
| Sse9I | AATT | 1 cut(s) | 241 |
| SseBI | AGGCCT | 1 cut(s) | 56 |
| SsiI | CCGC | 2 cut(s) | 38, 174 |
| SspMI | CTAG | 1 cut(s) | 135 |
| SstI | GAGCTC | 1 cut(s) | 113 |
| StuI | AGGCCT | 1 cut(s) | 56 |
| TaaI | ACNGT | 1 cut(s) | 285 |
| TaiI | ACGT | 1 cut(s) | 150 |
| TaqII | GACCGA | 1 cut(s) | 103 |
| TasI | AATT | 1 cut(s) | 241 |
| TatI | WGTACW | 1 cut(s) | 142 |
| TauI | GCSGC | 1 cut(s) | 41 |
| TspDTI | ATGAA | 3 cut(s) | 32, 52, 235 |
| XmnI | GAANNNNTTC | 1 cut(s) | 56 |
| XspI | CTAG | 1 cut(s) | 135 |