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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000000868 |
| rosa_multiflora | Rmu_sc0002933.1_g000011 Rmu_sc0003707.1_g000002 Rmu_sc0004180.1_g000020 Rmu_sc0008558.1_g000002 Rmu_sc0030499.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00057770 Rroxscaffold_4G00303260 Rroxscaffold_4G00323430 |
| rosa_rugosa | Rorug02G0301700 |
| rosa_samantha | Rh2AG433000 Rh2AG531900 Rh2CG367300 Rh3AG285900 Rh3AG292900 Rh4AG110800 Rh7AG458200 |
| rosa_wichuraiana | Rw3G023850 Rw3G029550 Rw4G003450 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 215 |
| AciI | CCGC | 1 cut(s) | 135 |
| AcsI | RAATTY | 1 cut(s) | 34 |
| AcuI | CTGAAG | 1 cut(s) | 72 |
| AfaI | GTAC | 1 cut(s) | 328 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 46 |
| AgsI | TTSAA | 4 cut(s) | 34, 107, 182, 340 |
| AluBI | AGCT | 3 cut(s) | 185, 192, 343 |
| AluI | AGCT | 3 cut(s) | 185, 192, 343 |
| AoxI | GGCC | 1 cut(s) | 151 |
| ApeKI | GCWGC | 2 cut(s) | 266, 343 |
| ApoI | RAATTY | 1 cut(s) | 34 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 153 |
| AsuC2I | CCSGG | 1 cut(s) | 44 |
| BbvI | GCAGC | 2 cut(s) | 278, 330 |
| BccI | CCATC | 2 cut(s) | 92, 125 |
| BcnI | CCSGG | 1 cut(s) | 44 |
| BfuAI | ACCTGC | 1 cut(s) | 215 |
| BisI | GCNGC | 3 cut(s) | 136, 267, 344 |
| BlsI | GCNGC | 3 cut(s) | 137, 268, 345 |
| BmcAI | AGTACT | 1 cut(s) | 328 |
| Bme1390I | CCNGG | 1 cut(s) | 44 |
| BmiI | GGNNCC | 1 cut(s) | 240 |
| BmrFI | CCNGG | 1 cut(s) | 44 |
| BmsI | GCATC | 1 cut(s) | 301 |
| BpmI | CTGGAG | 1 cut(s) | 165 |
| BpuMI | CCSGG | 1 cut(s) | 44 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 265, 295 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 46 |
| Bse118I | RCCGGY | 1 cut(s) | 62 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 46 |
| BseXI | GCAGC | 2 cut(s) | 278, 330 |
| BsgI | GTGCAG | 1 cut(s) | 193 |
| BshFI | GGCC | 1 cut(s) | 153 |
| BsiSI | CCGG | 2 cut(s) | 44, 63 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 46 |
| BsmI | GAATGC | 1 cut(s) | 318 |
| BsnI | GGCC | 1 cut(s) | 153 |
| BspACI | CCGC | 1 cut(s) | 135 |
| BspANI | GGCC | 1 cut(s) | 153 |
| BspLI | GGNNCC | 1 cut(s) | 240 |
| BspMI | ACCTGC | 1 cut(s) | 215 |
| BsrFI | RCCGGY | 1 cut(s) | 62 |
| BssAI | RCCGGY | 1 cut(s) | 62 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 59 |
| BstC8I | GCNNGC | 2 cut(s) | 64, 316 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 44 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 59 |
| BstSCI | CCNGG | 1 cut(s) | 42 |
| BstV1I | GCAGC | 2 cut(s) | 278, 330 |
| BsuRI | GGCC | 1 cut(s) | 153 |
| BveI | ACCTGC | 1 cut(s) | 215 |
| Cac8I | GCNNGC | 2 cut(s) | 64, 316 |
| Cfr10I | RCCGGY | 1 cut(s) | 62 |
| Csp6I | GTAC | 1 cut(s) | 327 |
| CviJI | RGCY | 6 cut(s) | 66, 86, 153, 185, 192, 343 |
| CviKI_1 | RGCY | 6 cut(s) | 66, 86, 153, 185, 192, 343 |
| CviQI | GTAC | 1 cut(s) | 327 |
| Eco147I | AGGCCT | 1 cut(s) | 153 |
| Eco57I | CTGAAG | 1 cut(s) | 72 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 44 |
| FaiI | YATR | 3 cut(s) | 114, 254, 324 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 141, 173 |
| Fnu4HI | GCNGC | 3 cut(s) | 136, 267, 344 |
| Fsp4HI | GCNGC | 3 cut(s) | 136, 267, 344 |
| GluI | GCNGC | 3 cut(s) | 136, 267, 344 |
| GsuI | CTGGAG | 1 cut(s) | 165 |
| HaeIII | GGCC | 1 cut(s) | 153 |
| HapII | CCGG | 2 cut(s) | 44, 63 |
| HincII | GTYRAC | 1 cut(s) | 259 |
| HindII | GTYRAC | 1 cut(s) | 259 |
| HinfI | GANTC | 3 cut(s) | 8, 71, 245 |
| HpaII | CCGG | 2 cut(s) | 44, 63 |
| Hpy166II | GTNNAC | 1 cut(s) | 259 |
| Hpy188I | TCNGA | 1 cut(s) | 91 |
| Hpy188III | TCNNGA | 2 cut(s) | 107, 144 |
| Hpy8I | GTNNAC | 1 cut(s) | 259 |
| HpyAV | CCTTC | 3 cut(s) | 143, 164, 349 |
| HpyCH4V | TGCA | 5 cut(s) | 53, 210, 266, 314, 346 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 59 |
| KroI | GCCGGC | 1 cut(s) | 62 |
| KroNI | GCCGGC | 1 cut(s) | 64 |
| LpnPI | CCDG | 5 cut(s) | 57, 76, 129, 220, 255 |
| Lsp1109I | GCAGC | 2 cut(s) | 278, 330 |
| LweI | GCATC | 1 cut(s) | 301 |
| MboII | GAAGA | 6 cut(s) | 128, 131, 149, 182, 240, 270 |
| MluCI | AATT | 1 cut(s) | 34 |
| MmeI | TCCRAC | 1 cut(s) | 99 |
| MnlI | CCTC | 3 cut(s) | 40, 50, 300 |
| MroNI | GCCGGC | 1 cut(s) | 62 |
| MroXI | GAANNNNTTC | 1 cut(s) | 153 |
| MspI | CCGG | 2 cut(s) | 44, 63 |
| MspR9I | CCNGG | 1 cut(s) | 44 |
| Mva1269I | GAATGC | 1 cut(s) | 318 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 59 |
| NaeI | GCCGGC | 1 cut(s) | 64 |
| NciI | CCSGG | 1 cut(s) | 44 |
| NgoMIV | GCCGGC | 1 cut(s) | 62 |
| NlaIV | GGNNCC | 1 cut(s) | 240 |
| PceI | AGGCCT | 1 cut(s) | 153 |
| PctI | GAATGC | 1 cut(s) | 318 |
| PdiI | GCCGGC | 1 cut(s) | 64 |
| PdmI | GAANNNNTTC | 1 cut(s) | 153 |
| PfeI | GAWTC | 3 cut(s) | 8, 71, 245 |
| PfoI | TCCNGGA | 1 cut(s) | 42 |
| PkrI | GCNGC | 3 cut(s) | 137, 268, 345 |
| PspN4I | GGNNCC | 1 cut(s) | 240 |
| RsaI | GTAC | 1 cut(s) | 328 |
| RsaNI | GTAC | 1 cut(s) | 327 |
| SatI | GCNGC | 3 cut(s) | 136, 267, 344 |
| ScaI | AGTACT | 1 cut(s) | 328 |
| ScrFI | CCNGG | 1 cut(s) | 44 |
| SetI | ASST | 8 cut(s) | 51, 128, 187, 194, 209, 215, 345, 360 |
| SfaNI | GCATC | 1 cut(s) | 301 |
| Sse9I | AATT | 1 cut(s) | 34 |
| SseBI | AGGCCT | 1 cut(s) | 153 |
| SsiI | CCGC | 1 cut(s) | 135 |
| StuI | AGGCCT | 1 cut(s) | 153 |
| StyD4I | CCNGG | 1 cut(s) | 42 |
| TaqI | TCGA | 1 cut(s) | 225 |
| TasI | AATT | 1 cut(s) | 34 |
| TatI | WGTACW | 1 cut(s) | 326 |
| TauI | GCSGC | 1 cut(s) | 138 |
| TfiI | GAWTC | 3 cut(s) | 8, 71, 245 |
| TseI | GCWGC | 2 cut(s) | 266, 343 |
| TspDTI | ATGAA | 3 cut(s) | 129, 149, 311 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 44 |
| XapI | RAATTY | 1 cut(s) | 34 |
| XmnI | GAANNNNTTC | 1 cut(s) | 153 |
| ZrmI | AGTACT | 1 cut(s) | 328 |