No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0101141 RchiOBHm_Chr2g0146981 RchiOBHm_Chr6g0270591 |
| rosa_laevigata | RLG00000006277 RLG00000008803 |
| rosa_multiflora | Rmu_sc0000082.1_g000035 Rmu_sc0026180.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00045610 Rroxscaffold_2G00076120 Rroxscaffold_2G00139700 Rroxscaffold_3G00249380 Rroxscaffold_5G00347260 Rroxscaffold_5G00366700 Rroxscaffold_6G00413360 |
| rosa_samantha | Rh1BG176700 Rh1DG115600 Rh1DG206200 Rh2BG631300 Rh3DG307000 Rh4BG059000 Rh4BG132000 Rh4BG315900 Rh4CG331400 Rh4DG065100 Rh5DG576200 Rh7BG306600 Rh7BG306700 Rh7BG307100 Rh7CG322600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 2 cut(s) | 239, 294 |
| AgsI | TTSAA | 3 cut(s) | 200, 265, 328 |
| AluBI | AGCT | 3 cut(s) | 40, 101, 285 |
| AluI | AGCT | 3 cut(s) | 40, 101, 285 |
| Alw21I | GWGCWC | 1 cut(s) | 113 |
| AoxI | GGCC | 1 cut(s) | 337 |
| ApoI | RAATTY | 2 cut(s) | 239, 294 |
| AspLEI | GCGC | 1 cut(s) | 155 |
| AspS9I | GGNCC | 1 cut(s) | 338 |
| AsuHPI | GGTGA | 1 cut(s) | 235 |
| Bbv12I | GWGCWC | 1 cut(s) | 113 |
| BmgT120I | GGNCC | 1 cut(s) | 338 |
| BmiI | GGNNCC | 1 cut(s) | 340 |
| BmsI | GCATC | 1 cut(s) | 217 |
| BsaJI | CCNNGG | 1 cut(s) | 334 |
| BseDI | CCNNGG | 1 cut(s) | 334 |
| BseGI | GGATG | 3 cut(s) | 190, 232, 309 |
| BseMII | CTCAG | 1 cut(s) | 96 |
| BseRI | GAGGAG | 1 cut(s) | 335 |
| BshFI | GGCC | 1 cut(s) | 339 |
| BsiHKAI | GWGCWC | 1 cut(s) | 113 |
| BsnI | GGCC | 1 cut(s) | 339 |
| Bsp1286I | GDGCHC | 1 cut(s) | 113 |
| BspANI | GGCC | 1 cut(s) | 339 |
| BspCNI | CTCAG | 1 cut(s) | 97 |
| BspLI | GGNNCC | 1 cut(s) | 340 |
| BssECI | CCNNGG | 1 cut(s) | 334 |
| BssT1I | CCWWGG | 1 cut(s) | 334 |
| BstDEI | CTNAG | 2 cut(s) | 105, 299 |
| BstF5I | GGATG | 3 cut(s) | 190, 232, 309 |
| BstHHI | GCGC | 1 cut(s) | 155 |
| BsuRI | GGCC | 1 cut(s) | 339 |
| BtsCI | GGATG | 3 cut(s) | 190, 232, 309 |
| CfoI | GCGC | 1 cut(s) | 155 |
| Cfr13I | GGNCC | 1 cut(s) | 338 |
| CviAII | CATG | 2 cut(s) | 73, 270 |
| CviJI | RGCY | 5 cut(s) | 40, 67, 101, 285, 339 |
| CviKI_1 | RGCY | 5 cut(s) | 40, 67, 101, 285, 339 |
| DdeI | CTNAG | 2 cut(s) | 105, 299 |
| Eco130I | CCWWGG | 1 cut(s) | 334 |
| EcoRI | GAATTC | 1 cut(s) | 239 |
| EcoT14I | CCWWGG | 1 cut(s) | 334 |
| ErhI | CCWWGG | 1 cut(s) | 334 |
| FaeI | CATG | 2 cut(s) | 76, 273 |
| FaiI | YATR | 5 cut(s) | 74, 143, 219, 251, 271 |
| FatI | CATG | 2 cut(s) | 72, 269 |
| FokI | GGATG | 3 cut(s) | 197, 239, 316 |
| GlaI | GCGC | 1 cut(s) | 154 |
| HaeIII | GGCC | 1 cut(s) | 339 |
| HhaI | GCGC | 1 cut(s) | 155 |
| Hin1II | CATG | 2 cut(s) | 76, 273 |
| Hin6I | GCGC | 1 cut(s) | 153 |
| HinP1I | GCGC | 1 cut(s) | 153 |
| HindIII | AAGCTT | 1 cut(s) | 283 |
| HphI | GGTGA | 1 cut(s) | 235 |
| Hpy188I | TCNGA | 1 cut(s) | 226 |
| Hpy188III | TCNNGA | 1 cut(s) | 233 |
| HpyAV | CCTTC | 2 cut(s) | 128, 135 |
| HpyCH4V | TGCA | 1 cut(s) | 351 |
| HpyF3I | CTNAG | 2 cut(s) | 105, 299 |
| Hsp92II | CATG | 2 cut(s) | 76, 273 |
| HspAI | GCGC | 1 cut(s) | 153 |
| LmnI | GCTCC | 1 cut(s) | 258 |
| LpnPI | CCDG | 2 cut(s) | 21, 30 |
| LweI | GCATC | 1 cut(s) | 217 |
| MboII | GAAGA | 3 cut(s) | 32, 62, 185 |
| MfeI | CAATTG | 1 cut(s) | 352 |
| MhlI | GDGCHC | 1 cut(s) | 113 |
| MluCI | AATT | 3 cut(s) | 239, 294, 352 |
| MnlI | CCTC | 7 cut(s) | 40, 132, 300, 322, 341, 353, 356 |
| MslI | CAYNNNNRTG | 1 cut(s) | 248 |
| MunI | CAATTG | 1 cut(s) | 352 |
| NlaIII | CATG | 2 cut(s) | 76, 273 |
| NlaIV | GGNNCC | 1 cut(s) | 340 |
| PspN4I | GGNNCC | 1 cut(s) | 340 |
| PspPI | GGNCC | 1 cut(s) | 338 |
| RseI | CAYNNNNRTG | 1 cut(s) | 248 |
| Sau96I | GGNCC | 1 cut(s) | 338 |
| SduI | GDGCHC | 1 cut(s) | 113 |
| SetI | ASST | 6 cut(s) | 29, 42, 103, 120, 287, 333 |
| SfaNI | GCATC | 1 cut(s) | 217 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 248 |
| Sse9I | AATT | 3 cut(s) | 239, 294, 352 |
| SspI | AATATT | 2 cut(s) | 59, 193 |
| StyI | CCWWGG | 1 cut(s) | 334 |
| TaqI | TCGA | 1 cut(s) | 42 |
| TasI | AATT | 3 cut(s) | 239, 294, 352 |
| TspDTI | ATGAA | 4 cut(s) | 69, 186, 201, 252 |
| XapI | RAATTY | 2 cut(s) | 239, 294 |