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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr2g0101141 RchiOBHm_Chr2g0146981 RchiOBHm_Chr6g0270591 |
| rosa_laevigata | RLG00000006277 RLG00000008803 |
| rosa_multiflora | Rmu_sc0000082.1_g000035 Rmu_sc0026180.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00045610 Rroxscaffold_2G00076120 Rroxscaffold_2G00139700 Rroxscaffold_3G00249380 Rroxscaffold_5G00347260 Rroxscaffold_5G00366700 Rroxscaffold_6G00413360 |
| rosa_samantha | Rh1BG176700 Rh1DG115600 Rh1DG206200 Rh2BG631300 Rh3DG307000 Rh4BG059000 Rh4BG132000 Rh4BG315900 Rh4CG331400 Rh4DG065100 Rh5DG576200 Rh7BG306600 Rh7BG306700 Rh7BG307100 Rh7CG322600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 2 cut(s) | 284, 377 |
| AcsI | RAATTY | 1 cut(s) | 121 |
| AfaI | GTAC | 1 cut(s) | 276 |
| AgsI | TTSAA | 4 cut(s) | 243, 349, 500, 509 |
| AluBI | AGCT | 3 cut(s) | 111, 368, 389 |
| AluI | AGCT | 3 cut(s) | 111, 368, 389 |
| Alw26I | GTCTC | 2 cut(s) | 443, 507 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 199 |
| AoxI | GGCC | 2 cut(s) | 284, 377 |
| ApeKI | GCWGC | 1 cut(s) | 433 |
| ApoI | RAATTY | 1 cut(s) | 121 |
| AseI | ATTAAT | 1 cut(s) | 474 |
| AsuC2I | CCSGG | 1 cut(s) | 217 |
| AsuHPI | GGTGA | 1 cut(s) | 263 |
| AsuNHI | GCTAGC | 1 cut(s) | 220 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 90, 123 |
| BalI | TGGCCA | 2 cut(s) | 286, 379 |
| BbvI | GCAGC | 1 cut(s) | 445 |
| BccI | CCATC | 3 cut(s) | 409, 445, 530 |
| BceAI | ACGGC | 1 cut(s) | 219 |
| BcnI | CCSGG | 1 cut(s) | 217 |
| BcoDI | GTCTC | 2 cut(s) | 443, 507 |
| BfaI | CTAG | 1 cut(s) | 221 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 390 |
| BisI | GCNGC | 1 cut(s) | 434 |
| BlsI | GCNGC | 1 cut(s) | 435 |
| Bme1390I | CCNGG | 1 cut(s) | 217 |
| BmrFI | CCNGG | 1 cut(s) | 217 |
| BmsI | GCATC | 1 cut(s) | 456 |
| BmtI | GCTAGC | 1 cut(s) | 224 |
| BpuEI | CTTGAG | 1 cut(s) | 464 |
| BpuMI | CCSGG | 1 cut(s) | 217 |
| Bse3DI | GCAATG | 1 cut(s) | 323 |
| BseGI | GGATG | 4 cut(s) | 40, 109, 277, 404 |
| BseMI | GCAATG | 1 cut(s) | 323 |
| BseMII | CTCAG | 1 cut(s) | 107 |
| BseRI | GAGGAG | 1 cut(s) | 461 |
| BseXI | GCAGC | 1 cut(s) | 445 |
| BsgI | GTGCAG | 1 cut(s) | 48 |
| BshFI | GGCC | 2 cut(s) | 286, 379 |
| BsiSI | CCGG | 1 cut(s) | 217 |
| BsmAI | GTCTC | 2 cut(s) | 443, 507 |
| BsmI | GAATGC | 2 cut(s) | 55, 142 |
| BsnI | GGCC | 2 cut(s) | 286, 379 |
| Bsp143I | GATC | 1 cut(s) | 420 |
| BspANI | GGCC | 2 cut(s) | 286, 379 |
| BspCNI | CTCAG | 1 cut(s) | 108 |
| BspOI | GCTAGC | 1 cut(s) | 224 |
| BsrDI | GCAATG | 1 cut(s) | 323 |
| BssMI | GATC | 1 cut(s) | 420 |
| Bst4CI | ACNGT | 2 cut(s) | 300, 353 |
| BstC8I | GCNNGC | 4 cut(s) | 74, 78, 222, 391 |
| BstDEI | CTNAG | 2 cut(s) | 116, 179 |
| BstF5I | GGATG | 4 cut(s) | 40, 109, 277, 404 |
| BstKTI | GATC | 1 cut(s) | 423 |
| BstMAI | GTCTC | 2 cut(s) | 443, 507 |
| BstMBI | GATC | 1 cut(s) | 420 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 390, 433 |
| BstSCI | CCNGG | 1 cut(s) | 215 |
| BstV1I | GCAGC | 1 cut(s) | 445 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 267 |
| BsuRI | GGCC | 2 cut(s) | 286, 379 |
| BtsCI | GGATG | 4 cut(s) | 40, 109, 277, 404 |
| BtsI | GCAGTG | 1 cut(s) | 337 |
| BtsIMutI | CAGTG | 3 cut(s) | 31, 66, 337 |
| Cac8I | GCNNGC | 4 cut(s) | 74, 78, 222, 391 |
| CaiI | CAGNNNCTG | 1 cut(s) | 199 |
| Csp6I | GTAC | 1 cut(s) | 275 |
| CviAII | CATG | 5 cut(s) | 261, 267, 282, 342, 381 |
| CviQI | GTAC | 1 cut(s) | 275 |
| DdeI | CTNAG | 2 cut(s) | 116, 179 |
| DpnI | GATC | 1 cut(s) | 422 |
| DpnII | GATC | 1 cut(s) | 420 |
| EaeI | YGGCCR | 2 cut(s) | 284, 377 |
| EcoT22I | ATGCAT | 1 cut(s) | 57 |
| FaeI | CATG | 5 cut(s) | 264, 270, 285, 345, 384 |
| FatI | CATG | 5 cut(s) | 260, 266, 281, 341, 380 |
| FauNDI | CATATG | 1 cut(s) | 51 |
| Fnu4HI | GCNGC | 1 cut(s) | 434 |
| FokI | GGATG | 4 cut(s) | 47, 116, 284, 391 |
| Fsp4HI | GCNGC | 1 cut(s) | 434 |
| FspBI | CTAG | 1 cut(s) | 221 |
| GluI | GCNGC | 1 cut(s) | 434 |
| HaeIII | GGCC | 2 cut(s) | 286, 379 |
| HapII | CCGG | 1 cut(s) | 217 |
| Hin1II | CATG | 5 cut(s) | 264, 270, 285, 345, 384 |
| HinfI | GANTC | 2 cut(s) | 137, 196 |
| HpaII | CCGG | 1 cut(s) | 217 |
| HphI | GGTGA | 1 cut(s) | 263 |
| Hpy166II | GTNNAC | 2 cut(s) | 40, 176 |
| Hpy188I | TCNGA | 2 cut(s) | 117, 201 |
| Hpy188III | TCNNGA | 3 cut(s) | 186, 418, 500 |
| Hpy8I | GTNNAC | 2 cut(s) | 40, 176 |
| HpyAV | CCTTC | 1 cut(s) | 288 |
| HpyCH4III | ACNGT | 2 cut(s) | 300, 353 |
| HpyCH4V | TGCA | 5 cut(s) | 29, 55, 316, 330, 469 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 390, 433 |
| HpyF3I | CTNAG | 2 cut(s) | 116, 179 |
| Hsp92II | CATG | 5 cut(s) | 264, 270, 285, 345, 384 |
| Kzo9I | GATC | 1 cut(s) | 420 |
| LpnPI | CCDG | 4 cut(s) | 15, 58, 230, 375 |
| Lsp1109I | GCAGC | 1 cut(s) | 445 |
| LweI | GCATC | 1 cut(s) | 456 |
| MaeI | CTAG | 1 cut(s) | 221 |
| MaeIII | GTNAC | 3 cut(s) | 251, 332, 359 |
| MalI | GATC | 1 cut(s) | 422 |
| MboI | GATC | 1 cut(s) | 420 |
| MboII | GAAGA | 1 cut(s) | 305 |
| MlsI | TGGCCA | 2 cut(s) | 286, 379 |
| MluCI | AATT | 5 cut(s) | 66, 121, 310, 325, 471 |
| MluNI | TGGCCA | 2 cut(s) | 286, 379 |
| MnlI | CCTC | 2 cut(s) | 146, 439 |
| Mox20I | TGGCCA | 2 cut(s) | 286, 379 |
| Mph1103I | ATGCAT | 1 cut(s) | 57 |
| MscI | TGGCCA | 2 cut(s) | 286, 379 |
| MseI | TTAA | 3 cut(s) | 170, 474, 483 |
| MslI | CAYNNNNRTG | 2 cut(s) | 147, 265 |
| Msp20I | TGGCCA | 2 cut(s) | 286, 379 |
| MspI | CCGG | 1 cut(s) | 217 |
| MspR9I | CCNGG | 1 cut(s) | 217 |
| Mva1269I | GAATGC | 2 cut(s) | 55, 142 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 390, 433 |
| NciI | CCSGG | 1 cut(s) | 217 |
| NdeI | CATATG | 1 cut(s) | 51 |
| NdeII | GATC | 1 cut(s) | 420 |
| NheI | GCTAGC | 1 cut(s) | 220 |
| NlaIII | CATG | 5 cut(s) | 264, 270, 285, 345, 384 |
| NmuCI | GTSAC | 2 cut(s) | 251, 332 |
| NsiI | ATGCAT | 1 cut(s) | 57 |
| PctI | GAATGC | 2 cut(s) | 55, 142 |
| PfeI | GAWTC | 2 cut(s) | 137, 196 |
| PkrI | GCNGC | 1 cut(s) | 435 |
| PshBI | ATTAAT | 1 cut(s) | 474 |
| PstNI | CAGNNNCTG | 1 cut(s) | 199 |
| RsaI | GTAC | 1 cut(s) | 276 |
| RsaNI | GTAC | 1 cut(s) | 275 |
| RseI | CAYNNNNRTG | 2 cut(s) | 147, 265 |
| SaqAI | TTAA | 3 cut(s) | 170, 474, 483 |
| SatI | GCNGC | 1 cut(s) | 434 |
| Sau3AI | GATC | 1 cut(s) | 420 |
| ScrFI | CCNGG | 1 cut(s) | 217 |
| SetI | ASST | 4 cut(s) | 113, 280, 370, 391 |
| SfaNI | GCATC | 1 cut(s) | 456 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 147, 265 |
| SmlI | CTYRAG | 1 cut(s) | 443 |
| SmoI | CTYRAG | 1 cut(s) | 443 |
| Sse9I | AATT | 5 cut(s) | 66, 121, 310, 325, 471 |
| SspMI | CTAG | 1 cut(s) | 221 |
| StyD4I | CCNGG | 1 cut(s) | 215 |
| TaaI | ACNGT | 2 cut(s) | 300, 353 |
| TaqI | TCGA | 2 cut(s) | 17, 423 |
| TasI | AATT | 5 cut(s) | 66, 121, 310, 325, 471 |
| TfiI | GAWTC | 2 cut(s) | 137, 196 |
| Tru1I | TTAA | 3 cut(s) | 170, 474, 483 |
| Tru9I | TTAA | 3 cut(s) | 170, 474, 483 |
| TscAI | CASTG | 3 cut(s) | 31, 66, 337 |
| TseFI | GTSAC | 2 cut(s) | 251, 332 |
| TseI | GCWGC | 1 cut(s) | 433 |
| Tsp45I | GTSAC | 2 cut(s) | 251, 332 |
| TspDTI | ATGAA | 2 cut(s) | 270, 426 |
| TspGWI | ACGGA | 2 cut(s) | 116, 143 |
| TspRI | CASTG | 3 cut(s) | 31, 66, 337 |
| VspI | ATTAAT | 1 cut(s) | 474 |
| XapI | RAATTY | 1 cut(s) | 121 |
| XspI | CTAG | 1 cut(s) | 221 |
| Zsp2I | ATGCAT | 1 cut(s) | 57 |