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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom11g15310 pycom11g15370 |
| rosa_laevigata | RLG00000006965 |
| rosa_multiflora | Rmu_co8253563.1_g000001 Rmu_sc0003371.1_g000003 Rmu_sc0013146.1_g000005 Rmu_sc0013284.1_g000001 Rmu_sc0021708.1_g000005 |
| rosa_roxburghii | Rroxscaffold_1G00027810 Rroxscaffold_1G00042300 Rroxscaffold_1G00042310 Rroxscaffold_3G00237790 Rroxscaffold_3G00237800 Rroxscaffold_4G00285110 Rroxscaffold_5G00345700 Rroxscaffold_5G00345710 Rroxscaffold_5G00352780 Rroxscaffold_7G00192560 Rroxscaffold_7G00204520 |
| rosa_rugosa | Rorug05G0196200 |
| rosa_samantha | Rh6BG433000 Rh6CG482800 Rh7AG241200 Rh7DG247200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccIII | TCCGGA | 1 cut(s) | 43 |
| AcuI | CTGAAG | 1 cut(s) | 93 |
| AfaI | GTAC | 1 cut(s) | 117 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 50 |
| AgsI | TTSAA | 4 cut(s) | 113, 288, 306, 315 |
| AjnI | CCWGG | 1 cut(s) | 88 |
| AluBI | AGCT | 2 cut(s) | 221, 266 |
| AluI | AGCT | 2 cut(s) | 221, 266 |
| Aor13HI | TCCGGA | 1 cut(s) | 43 |
| ApeKI | GCWGC | 3 cut(s) | 68, 221, 242 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 130, 162 |
| AsuHPI | GGTGA | 1 cut(s) | 148 |
| AsuII | TTCGAA | 1 cut(s) | 149 |
| BbvI | GCAGC | 3 cut(s) | 55, 208, 229 |
| BciT130I | CCWGG | 1 cut(s) | 90 |
| BfaI | CTAG | 2 cut(s) | 24, 294 |
| BisI | GCNGC | 3 cut(s) | 69, 222, 243 |
| BlsI | GCNGC | 3 cut(s) | 70, 223, 244 |
| Bme1390I | CCNGG | 1 cut(s) | 90 |
| BmrFI | CCNGG | 1 cut(s) | 90 |
| BmrI | ACTGGG | 1 cut(s) | 120 |
| BmsI | GCATC | 1 cut(s) | 289 |
| BmuI | ACTGGG | 1 cut(s) | 120 |
| BpmI | CTGGAG | 1 cut(s) | 111 |
| Bpu14I | TTCGAA | 1 cut(s) | 149 |
| BsaWI | WCCGGW | 1 cut(s) | 43 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 25, 55 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 50 |
| Bse118I | RCCGGY | 1 cut(s) | 50 |
| Bse1I | ACTGG | 1 cut(s) | 126 |
| Bse3DI | GCAATG | 1 cut(s) | 61 |
| BseAI | TCCGGA | 1 cut(s) | 43 |
| BseBI | CCWGG | 1 cut(s) | 90 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 50 |
| BseMI | GCAATG | 1 cut(s) | 61 |
| BseNI | ACTGG | 1 cut(s) | 126 |
| BseXI | GCAGC | 3 cut(s) | 55, 208, 229 |
| BsiSI | CCGG | 2 cut(s) | 44, 51 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 50 |
| Bsp119I | TTCGAA | 1 cut(s) | 149 |
| Bsp13I | TCCGGA | 1 cut(s) | 43 |
| BspEI | TCCGGA | 1 cut(s) | 43 |
| BspT104I | TTCGAA | 1 cut(s) | 149 |
| BsrDI | GCAATG | 1 cut(s) | 61 |
| BsrFI | RCCGGY | 1 cut(s) | 50 |
| BsrI | ACTGG | 1 cut(s) | 126 |
| BssAI | RCCGGY | 1 cut(s) | 50 |
| Bst2UI | CCWGG | 1 cut(s) | 90 |
| Bst4CI | ACNGT | 1 cut(s) | 136 |
| BstBI | TTCGAA | 1 cut(s) | 149 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 227 |
| BstNI | CCWGG | 1 cut(s) | 90 |
| BstSCI | CCNGG | 1 cut(s) | 88 |
| BstV1I | GCAGC | 3 cut(s) | 55, 208, 229 |
| Cfr10I | RCCGGY | 1 cut(s) | 50 |
| Csp6I | GTAC | 1 cut(s) | 116 |
| CviJI | RGCY | 4 cut(s) | 68, 221, 230, 266 |
| CviKI_1 | RGCY | 4 cut(s) | 68, 221, 230, 266 |
| CviQI | GTAC | 1 cut(s) | 116 |
| Eco57I | CTGAAG | 1 cut(s) | 93 |
| EcoRII | CCWGG | 1 cut(s) | 88 |
| Fnu4HI | GCNGC | 3 cut(s) | 69, 222, 243 |
| Fsp4HI | GCNGC | 3 cut(s) | 69, 222, 243 |
| FspBI | CTAG | 2 cut(s) | 24, 294 |
| GluI | GCNGC | 3 cut(s) | 69, 222, 243 |
| GsuI | CTGGAG | 1 cut(s) | 111 |
| HapII | CCGG | 2 cut(s) | 44, 51 |
| HinfI | GANTC | 3 cut(s) | 5, 11, 34 |
| HpaII | CCGG | 2 cut(s) | 44, 51 |
| HphI | GGTGA | 1 cut(s) | 148 |
| Hpy166II | GTNNAC | 2 cut(s) | 83, 178 |
| Hpy188I | TCNGA | 2 cut(s) | 10, 132 |
| Hpy188III | TCNNGA | 1 cut(s) | 44 |
| Hpy8I | GTNNAC | 2 cut(s) | 83, 178 |
| Hpy99I | CGWCG | 1 cut(s) | 136 |
| HpyAV | CCTTC | 2 cut(s) | 71, 163 |
| HpyCH4III | ACNGT | 1 cut(s) | 136 |
| HpyCH4V | TGCA | 1 cut(s) | 224 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 227 |
| Kpn2I | TCCGGA | 1 cut(s) | 43 |
| LmnI | GCTCC | 1 cut(s) | 211 |
| LpnPI | CCDG | 5 cut(s) | 57, 64, 75, 102, 139 |
| Lsp1109I | GCAGC | 3 cut(s) | 55, 208, 229 |
| LweI | GCATC | 1 cut(s) | 289 |
| MaeI | CTAG | 2 cut(s) | 24, 294 |
| MaeIII | GTNAC | 1 cut(s) | 136 |
| MboII | GAAGA | 5 cut(s) | 86, 138, 175, 178, 206 |
| MlyI | GAGTC | 1 cut(s) | 28 |
| MmeI | TCCRAC | 1 cut(s) | 155 |
| MroI | TCCGGA | 1 cut(s) | 43 |
| MspI | CCGG | 2 cut(s) | 44, 51 |
| MspR9I | CCNGG | 1 cut(s) | 90 |
| MvaI | CCWGG | 1 cut(s) | 90 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 227 |
| NmuCI | GTSAC | 1 cut(s) | 136 |
| NspV | TTCGAA | 1 cut(s) | 149 |
| PfeI | GAWTC | 2 cut(s) | 5, 11 |
| PkrI | GCNGC | 3 cut(s) | 70, 223, 244 |
| PleI | GAGTC | 1 cut(s) | 28 |
| PpsI | GAGTC | 1 cut(s) | 28 |
| Psp6I | CCWGG | 1 cut(s) | 88 |
| PspGI | CCWGG | 1 cut(s) | 88 |
| RsaI | GTAC | 1 cut(s) | 117 |
| RsaNI | GTAC | 1 cut(s) | 116 |
| SatI | GCNGC | 3 cut(s) | 69, 222, 243 |
| SchI | GAGTC | 1 cut(s) | 28 |
| ScrFI | CCNGG | 1 cut(s) | 90 |
| SetI | ASST | 6 cut(s) | 82, 91, 174, 223, 268, 276 |
| SfaNI | GCATC | 1 cut(s) | 289 |
| SfuI | TTCGAA | 1 cut(s) | 149 |
| SspMI | CTAG | 2 cut(s) | 24, 294 |
| StyD4I | CCNGG | 1 cut(s) | 88 |
| TaaI | ACNGT | 1 cut(s) | 136 |
| TaqI | TCGA | 2 cut(s) | 32, 149 |
| TfiI | GAWTC | 2 cut(s) | 5, 11 |
| TseFI | GTSAC | 1 cut(s) | 136 |
| TseI | GCWGC | 3 cut(s) | 68, 221, 242 |
| Tsp45I | GTSAC | 1 cut(s) | 136 |
| TspDTI | ATGAA | 2 cut(s) | 114, 207 |
| XspI | CTAG | 2 cut(s) | 24, 294 |