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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom11g15310 pycom11g15370 |
| rosa_laevigata | RLG00000006965 |
| rosa_multiflora | Rmu_co8253563.1_g000001 Rmu_sc0003371.1_g000003 Rmu_sc0013146.1_g000005 Rmu_sc0013284.1_g000001 Rmu_sc0021708.1_g000005 |
| rosa_roxburghii | Rroxscaffold_1G00027810 Rroxscaffold_1G00042300 Rroxscaffold_1G00042310 Rroxscaffold_3G00237790 Rroxscaffold_3G00237800 Rroxscaffold_4G00285110 Rroxscaffold_5G00345700 Rroxscaffold_5G00345710 Rroxscaffold_5G00352780 Rroxscaffold_7G00192560 Rroxscaffold_7G00204520 |
| rosa_rugosa | Rorug05G0196200 |
| rosa_samantha | Rh6BG433000 Rh6CG482800 Rh7AG241200 Rh7DG247200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 320, 361, 468 |
| AclWI | GGATC | 2 cut(s) | 350, 445 |
| AcsI | RAATTY | 1 cut(s) | 158 |
| AcyI | GRCGYC | 1 cut(s) | 514 |
| AfaI | GTAC | 1 cut(s) | 39 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 319, 420 |
| AluBI | AGCT | 2 cut(s) | 124, 252 |
| AluI | AGCT | 2 cut(s) | 124, 252 |
| Alw26I | GTCTC | 1 cut(s) | 308 |
| AlwI | GGATC | 2 cut(s) | 350, 445 |
| Ama87I | CYCGRG | 1 cut(s) | 270 |
| ApeKI | GCWGC | 2 cut(s) | 43, 249 |
| ApoI | RAATTY | 1 cut(s) | 158 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 265 |
| AsuC2I | CCSGG | 1 cut(s) | 396 |
| AsuHPI | GGTGA | 1 cut(s) | 448 |
| AvaI | CYCGRG | 1 cut(s) | 270 |
| BbvI | GCAGC | 2 cut(s) | 55, 261 |
| BccI | CCATC | 4 cut(s) | 251, 283, 321, 362 |
| BceAI | ACGGC | 1 cut(s) | 41 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 59, 93 |
| BcnI | CCSGG | 1 cut(s) | 396 |
| BcoDI | GTCTC | 1 cut(s) | 308 |
| BfaI | CTAG | 3 cut(s) | 216, 317, 486 |
| BisI | GCNGC | 3 cut(s) | 44, 250, 361 |
| BlsI | GCNGC | 3 cut(s) | 45, 251, 362 |
| Bme1390I | CCNGG | 1 cut(s) | 396 |
| BmeT110I | CYCGRG | 1 cut(s) | 270 |
| BmiI | GGNNCC | 1 cut(s) | 268 |
| BmrFI | CCNGG | 1 cut(s) | 396 |
| BpuMI | CCSGG | 1 cut(s) | 396 |
| BsaHI | GRCGYC | 1 cut(s) | 514 |
| BsaJI | CCNNGG | 1 cut(s) | 404 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 319, 420 |
| BseDI | CCNNGG | 1 cut(s) | 404 |
| BseGI | GGATG | 4 cut(s) | 175, 262, 345, 400 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 319, 420 |
| BseXI | GCAGC | 2 cut(s) | 55, 261 |
| BsiHKCI | CYCGRG | 1 cut(s) | 270 |
| BsiSI | CCGG | 1 cut(s) | 395 |
| BslFI | GGGAC | 2 cut(s) | 411, 479 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 319, 420 |
| BsmAI | GTCTC | 1 cut(s) | 308 |
| BsmFI | GGGAC | 2 cut(s) | 411, 479 |
| BsoBI | CYCGRG | 1 cut(s) | 270 |
| Bsp143I | GATC | 3 cut(s) | 199, 342, 450 |
| BspACI | CCGC | 3 cut(s) | 320, 361, 468 |
| BspLI | GGNNCC | 1 cut(s) | 268 |
| BspPI | GGATC | 2 cut(s) | 350, 445 |
| BssECI | CCNNGG | 1 cut(s) | 404 |
| BssMI | GATC | 3 cut(s) | 199, 342, 450 |
| BssNI | GRCGYC | 1 cut(s) | 514 |
| BssT1I | CCWWGG | 1 cut(s) | 404 |
| Bst4CI | ACNGT | 1 cut(s) | 196 |
| Bst6I | CTCTTC | 1 cut(s) | 279 |
| BstACI | GRCGYC | 1 cut(s) | 514 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 52 |
| BstF5I | GGATG | 4 cut(s) | 175, 262, 345, 400 |
| BstKTI | GATC | 3 cut(s) | 202, 345, 453 |
| BstMAI | GTCTC | 1 cut(s) | 308 |
| BstMBI | GATC | 3 cut(s) | 199, 342, 450 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 52, 317 |
| BstSCI | CCNGG | 1 cut(s) | 394 |
| BstV1I | GCAGC | 2 cut(s) | 55, 261 |
| BtsCI | GGATG | 4 cut(s) | 175, 262, 345, 400 |
| CseI | GACGC | 1 cut(s) | 503 |
| Csp6I | GTAC | 1 cut(s) | 38 |
| CviAII | CATG | 2 cut(s) | 59, 432 |
| CviJI | RGCY | 4 cut(s) | 124, 252, 360, 381 |
| CviKI_1 | RGCY | 4 cut(s) | 124, 252, 360, 381 |
| CviQI | GTAC | 1 cut(s) | 38 |
| DpnI | GATC | 3 cut(s) | 201, 344, 452 |
| DpnII | GATC | 3 cut(s) | 199, 342, 450 |
| Eam1104I | CTCTTC | 1 cut(s) | 279 |
| EarI | CTCTTC | 1 cut(s) | 279 |
| EciI | GGCGGA | 1 cut(s) | 457 |
| Eco130I | CCWWGG | 1 cut(s) | 404 |
| Eco88I | CYCGRG | 1 cut(s) | 270 |
| EcoRI | GAATTC | 1 cut(s) | 158 |
| EcoT14I | CCWWGG | 1 cut(s) | 404 |
| ErhI | CCWWGG | 1 cut(s) | 404 |
| FaeI | CATG | 2 cut(s) | 62, 435 |
| FaiI | YATR | 7 cut(s) | 60, 135, 209, 427, 433, 492, 520 |
| FaqI | GGGAC | 2 cut(s) | 411, 479 |
| FatI | CATG | 2 cut(s) | 58, 431 |
| Fnu4HI | GCNGC | 3 cut(s) | 44, 250, 361 |
| FokI | GGATG | 4 cut(s) | 182, 269, 332, 387 |
| Fsp4HI | GCNGC | 3 cut(s) | 44, 250, 361 |
| FspBI | CTAG | 3 cut(s) | 216, 317, 486 |
| GluI | GCNGC | 3 cut(s) | 44, 250, 361 |
| HapII | CCGG | 1 cut(s) | 395 |
| HgaI | GACGC | 1 cut(s) | 503 |
| Hin1I | GRCGYC | 1 cut(s) | 514 |
| Hin1II | CATG | 2 cut(s) | 62, 435 |
| HinfI | GANTC | 2 cut(s) | 20, 331 |
| HpaII | CCGG | 1 cut(s) | 395 |
| HphI | GGTGA | 1 cut(s) | 448 |
| Hpy188I | TCNGA | 2 cut(s) | 157, 342 |
| Hpy188III | TCNNGA | 1 cut(s) | 270 |
| HpyCH4III | ACNGT | 1 cut(s) | 196 |
| HpyCH4V | TGCA | 1 cut(s) | 249 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 52, 317 |
| Hsp92I | GRCGYC | 1 cut(s) | 514 |
| Hsp92II | CATG | 2 cut(s) | 62, 435 |
| Kzo9I | GATC | 3 cut(s) | 199, 342, 450 |
| LmnI | GCTCC | 1 cut(s) | 67 |
| LpnPI | CCDG | 2 cut(s) | 320, 408 |
| Lsp1109I | GCAGC | 2 cut(s) | 55, 261 |
| MaeI | CTAG | 3 cut(s) | 216, 317, 486 |
| MaeIII | GTNAC | 1 cut(s) | 479 |
| MalI | GATC | 3 cut(s) | 201, 344, 452 |
| MboI | GATC | 3 cut(s) | 199, 342, 450 |
| MboII | GAAGA | 4 cut(s) | 293, 296, 497, 500 |
| MluCI | AATT | 4 cut(s) | 127, 158, 187, 261 |
| MmeI | TCCRAC | 4 cut(s) | 216, 222, 256, 373 |
| MnlI | CCTC | 3 cut(s) | 96, 321, 475 |
| MroXI | GAANNNNTTC | 1 cut(s) | 265 |
| MseI | TTAA | 2 cut(s) | 126, 183 |
| MslI | CAYNNNNRTG | 1 cut(s) | 430 |
| MspI | CCGG | 1 cut(s) | 395 |
| MspR9I | CCNGG | 1 cut(s) | 396 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 52, 317 |
| NciI | CCSGG | 1 cut(s) | 396 |
| NdeII | GATC | 3 cut(s) | 199, 342, 450 |
| NlaIII | CATG | 2 cut(s) | 62, 435 |
| NlaIV | GGNNCC | 1 cut(s) | 268 |
| PdmI | GAANNNNTTC | 1 cut(s) | 265 |
| PfeI | GAWTC | 2 cut(s) | 20, 331 |
| PkrI | GCNGC | 3 cut(s) | 45, 251, 362 |
| PspN4I | GGNNCC | 1 cut(s) | 268 |
| RsaI | GTAC | 1 cut(s) | 39 |
| RsaNI | GTAC | 1 cut(s) | 38 |
| RseI | CAYNNNNRTG | 1 cut(s) | 430 |
| SaqAI | TTAA | 2 cut(s) | 126, 183 |
| SatI | GCNGC | 3 cut(s) | 44, 250, 361 |
| Sau3AI | GATC | 3 cut(s) | 199, 342, 450 |
| ScrFI | CCNGG | 1 cut(s) | 396 |
| SetI | ASST | 4 cut(s) | 126, 221, 254, 491 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 430 |
| Sse9I | AATT | 4 cut(s) | 127, 158, 187, 261 |
| SsiI | CCGC | 3 cut(s) | 320, 361, 468 |
| SspMI | CTAG | 3 cut(s) | 216, 317, 486 |
| StyD4I | CCNGG | 1 cut(s) | 394 |
| StyI | CCWWGG | 1 cut(s) | 404 |
| TaaI | ACNGT | 1 cut(s) | 196 |
| TaqI | TCGA | 1 cut(s) | 387 |
| TaqII | GACCGA | 1 cut(s) | 411 |
| TasI | AATT | 4 cut(s) | 127, 158, 187, 261 |
| TauI | GCSGC | 1 cut(s) | 363 |
| TfiI | GAWTC | 2 cut(s) | 20, 331 |
| Tru1I | TTAA | 2 cut(s) | 126, 183 |
| Tru9I | TTAA | 2 cut(s) | 126, 183 |
| TseI | GCWGC | 2 cut(s) | 43, 249 |
| TspDTI | ATGAA | 2 cut(s) | 47, 186 |
| TspGWI | ACGGA | 1 cut(s) | 384 |
| XapI | RAATTY | 1 cut(s) | 158 |
| XmnI | GAANNNNTTC | 1 cut(s) | 265 |
| XspI | CTAG | 3 cut(s) | 216, 317, 486 |