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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom11g15310 pycom11g15370 |
| rosa_laevigata | RLG00000006965 |
| rosa_multiflora | Rmu_co8253563.1_g000001 Rmu_sc0003371.1_g000003 Rmu_sc0013146.1_g000005 Rmu_sc0013284.1_g000001 Rmu_sc0021708.1_g000005 |
| rosa_roxburghii | Rroxscaffold_1G00027810 Rroxscaffold_1G00042300 Rroxscaffold_1G00042310 Rroxscaffold_3G00237790 Rroxscaffold_3G00237800 Rroxscaffold_4G00285110 Rroxscaffold_5G00345700 Rroxscaffold_5G00345710 Rroxscaffold_5G00352780 Rroxscaffold_7G00192560 Rroxscaffold_7G00204520 |
| rosa_rugosa | Rorug05G0196200 |
| rosa_samantha | Rh6BG433000 Rh6CG482800 Rh7AG241200 Rh7DG247200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 26 |
| AfaI | GTAC | 2 cut(s) | 55, 134 |
| AflIII | ACRYGT | 2 cut(s) | 61, 90 |
| AgsI | TTSAA | 3 cut(s) | 255, 273, 282 |
| AluBI | AGCT | 2 cut(s) | 76, 188 |
| AluI | AGCT | 2 cut(s) | 76, 188 |
| ApeKI | GCWGC | 4 cut(s) | 23, 185, 188, 209 |
| BbvI | GCAGC | 4 cut(s) | 10, 175, 196, 197 |
| BfaI | CTAG | 1 cut(s) | 261 |
| BisI | GCNGC | 4 cut(s) | 24, 186, 189, 210 |
| BlsI | GCNGC | 4 cut(s) | 25, 187, 190, 211 |
| BmcAI | AGTACT | 1 cut(s) | 55 |
| BmsI | GCATC | 1 cut(s) | 256 |
| Bse1I | ACTGG | 2 cut(s) | 140, 292 |
| BseNI | ACTGG | 2 cut(s) | 140, 292 |
| BseXI | GCAGC | 4 cut(s) | 10, 175, 196, 197 |
| Bsp143I | GATC | 1 cut(s) | 18 |
| BspACI | CCGC | 1 cut(s) | 26 |
| BspQI | GCTCTTC | 1 cut(s) | 66 |
| BsrI | ACTGG | 2 cut(s) | 140, 292 |
| BssMI | GATC | 1 cut(s) | 18 |
| Bst6I | CTCTTC | 1 cut(s) | 66 |
| BstC8I | GCNNGC | 1 cut(s) | 183 |
| BstKTI | GATC | 1 cut(s) | 21 |
| BstMBI | GATC | 1 cut(s) | 18 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 194, 266 |
| BstNSI | RCATGY | 2 cut(s) | 65, 94 |
| BstV1I | GCAGC | 4 cut(s) | 10, 175, 196, 197 |
| BtsIMutI | CAGTG | 1 cut(s) | 147 |
| Cac8I | GCNNGC | 1 cut(s) | 183 |
| Csp6I | GTAC | 2 cut(s) | 54, 133 |
| CviAII | CATG | 3 cut(s) | 62, 82, 91 |
| CviJI | RGCY | 5 cut(s) | 76, 188, 197, 233, 260 |
| CviKI_1 | RGCY | 5 cut(s) | 76, 188, 197, 233, 260 |
| CviQI | GTAC | 2 cut(s) | 54, 133 |
| DpnI | GATC | 1 cut(s) | 20 |
| DpnII | GATC | 1 cut(s) | 18 |
| Eam1104I | CTCTTC | 1 cut(s) | 66 |
| EarI | CTCTTC | 1 cut(s) | 66 |
| FaeI | CATG | 3 cut(s) | 65, 85, 94 |
| FaiI | YATR | 7 cut(s) | 63, 83, 87, 92, 96, 117, 137 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 60, 92 |
| FatI | CATG | 3 cut(s) | 61, 81, 90 |
| Fnu4HI | GCNGC | 4 cut(s) | 24, 186, 189, 210 |
| Fsp4HI | GCNGC | 4 cut(s) | 24, 186, 189, 210 |
| FspBI | CTAG | 1 cut(s) | 261 |
| GluI | GCNGC | 4 cut(s) | 24, 186, 189, 210 |
| Hin1II | CATG | 3 cut(s) | 65, 85, 94 |
| HinfI | GANTC | 1 cut(s) | 125 |
| Hpy166II | GTNNAC | 1 cut(s) | 149 |
| Hpy8I | GTNNAC | 1 cut(s) | 149 |
| HpyAV | CCTTC | 1 cut(s) | 223 |
| HpyCH4V | TGCA | 1 cut(s) | 191 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 194, 266 |
| Hsp92II | CATG | 3 cut(s) | 65, 85, 94 |
| Kzo9I | GATC | 1 cut(s) | 18 |
| LguI | GCTCTTC | 1 cut(s) | 66 |
| LmnI | GCTCC | 1 cut(s) | 178 |
| LpnPI | CCDG | 2 cut(s) | 153, 273 |
| Lsp1109I | GCAGC | 4 cut(s) | 10, 175, 196, 197 |
| LweI | GCATC | 1 cut(s) | 256 |
| MaeI | CTAG | 1 cut(s) | 261 |
| MalI | GATC | 1 cut(s) | 20 |
| MboI | GATC | 1 cut(s) | 18 |
| MboII | GAAGA | 2 cut(s) | 83, 173 |
| MluCI | AATT | 1 cut(s) | 46 |
| MnlI | CCTC | 1 cut(s) | 49 |
| MseI | TTAA | 1 cut(s) | 8 |
| MslI | CAYNNNNRTG | 1 cut(s) | 140 |
| MspA1I | CMGCKG | 1 cut(s) | 188 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 194, 266 |
| NdeII | GATC | 1 cut(s) | 18 |
| NlaIII | CATG | 3 cut(s) | 65, 85, 94 |
| NspI | RCATGY | 2 cut(s) | 65, 94 |
| PciI | ACATGT | 2 cut(s) | 61, 90 |
| PciSI | GCTCTTC | 1 cut(s) | 66 |
| PfeI | GAWTC | 1 cut(s) | 125 |
| PkrI | GCNGC | 4 cut(s) | 25, 187, 190, 211 |
| PscI | ACATGT | 2 cut(s) | 61, 90 |
| PvuII | CAGCTG | 1 cut(s) | 188 |
| RsaI | GTAC | 2 cut(s) | 55, 134 |
| RsaNI | GTAC | 2 cut(s) | 54, 133 |
| RseI | CAYNNNNRTG | 1 cut(s) | 140 |
| SapI | GCTCTTC | 1 cut(s) | 66 |
| SaqAI | TTAA | 1 cut(s) | 8 |
| SatI | GCNGC | 4 cut(s) | 24, 186, 189, 210 |
| Sau3AI | GATC | 1 cut(s) | 18 |
| ScaI | AGTACT | 1 cut(s) | 55 |
| SetI | ASST | 4 cut(s) | 78, 122, 190, 243 |
| SfaNI | GCATC | 1 cut(s) | 256 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 140 |
| Sse9I | AATT | 1 cut(s) | 46 |
| SsiI | CCGC | 1 cut(s) | 26 |
| SspMI | CTAG | 1 cut(s) | 261 |
| TasI | AATT | 1 cut(s) | 46 |
| TatI | WGTACW | 2 cut(s) | 53, 132 |
| TfiI | GAWTC | 1 cut(s) | 125 |
| Tru1I | TTAA | 1 cut(s) | 8 |
| Tru9I | TTAA | 1 cut(s) | 8 |
| TscAI | CASTG | 1 cut(s) | 147 |
| TseI | GCWGC | 4 cut(s) | 23, 185, 188, 209 |
| TspDTI | ATGAA | 2 cut(s) | 70, 174 |
| TspRI | CASTG | 1 cut(s) | 147 |
| XceI | RCATGY | 2 cut(s) | 65, 94 |
| XspI | CTAG | 1 cut(s) | 261 |
| ZrmI | AGTACT | 1 cut(s) | 55 |