RLG00000010226

No description available

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Reverse (-)
64413692 .. 64414135
444 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000010226

Sequence Viewer

Length: 312 bp
ATGTCTTTGGTTTATAACTCTGACTTCTCTACCCCTCCTGCTCTTTCAAATGTCAACTATTTAGATGGGGATGACAAACACACTGCGAGAAAGTATTTTGCAGTTCTTGGAGGTGATCAAAAACCCAAGCTAAATAAGAGTAGGGCTGAGATCAGTCTCATAATCCAAGAGAAACCGGGACATGTTTTCGATGACTATGAAAATGGTTGTGGCTGGTGGGACTGCAATATGGAGGGTATTGAAGAAGTTGGTGTCAATGAGGTGTGGGAAGGAGTGGGCTCAACCACATTGGGAGGAATAGAGTGGCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

104

Amino Acids

11.48

Weight (kDa)

4.54

Isoelectric Point (pI)

32.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 15
AflIII ACRYGT 1 cut(s) 181
AgsI TTSAA 2 cut(s) 48, 242
AluBI AGCT 1 cut(s) 130
AluI AGCT 1 cut(s) 130
Alw26I GTCTC 1 cut(s) 161
AsuC2I CCSGG 1 cut(s) 177
AsuHPI GGTGA 1 cut(s) 125
BanII GRGCYC 1 cut(s) 281
BccI CCATC 1 cut(s) 59
BclI TGATCA 1 cut(s) 115
BcnI CCSGG 1 cut(s) 177
BcoDI GTCTC 1 cut(s) 161
Bme1390I CCNGG 1 cut(s) 177
BmrFI CCNGG 1 cut(s) 177
BpuMI CCSGG 1 cut(s) 177
BseGI GGATG 1 cut(s) 76
BseMII CTCAG 1 cut(s) 138
BsiSI CCGG 1 cut(s) 176
BslFI GGGAC 2 cut(s) 192, 233
BsmAI GTCTC 1 cut(s) 161
BsmFI GGGAC 2 cut(s) 192, 233
Bsp1286I GDGCHC 1 cut(s) 281
Bsp143I GATC 2 cut(s) 115, 150
BspCNI CTCAG 1 cut(s) 139
BssMI GATC 2 cut(s) 115, 150
BstDEI CTNAG 1 cut(s) 147
BstF5I GGATG 1 cut(s) 76
BstKTI GATC 2 cut(s) 118, 153
BstMAI GTCTC 1 cut(s) 161
BstMBI GATC 2 cut(s) 115, 150
BstNSI RCATGY 1 cut(s) 185
BstSCI CCNGG 1 cut(s) 175
BtsCI GGATG 1 cut(s) 76
BtsI GCAGTG 1 cut(s) 81
BtsIMutI CAGTG 1 cut(s) 81
CviAII CATG 1 cut(s) 182
CviJI RGCY 4 cut(s) 130, 146, 213, 279
CviKI_1 RGCY 4 cut(s) 130, 146, 213, 279
DdeI CTNAG 1 cut(s) 147
DpnI GATC 2 cut(s) 117, 152
DpnII GATC 2 cut(s) 115, 150
Eco24I GRGCYC 1 cut(s) 281
EcoT38I GRGCYC 1 cut(s) 281
FaeI CATG 1 cut(s) 185
FaiI YATR 5 cut(s) 15, 161, 183, 198, 230
FaqI GGGAC 2 cut(s) 192, 233
FatI CATG 1 cut(s) 181
FbaI TGATCA 1 cut(s) 115
FokI GGATG 1 cut(s) 83
FriOI GRGCYC 1 cut(s) 281
HapII CCGG 1 cut(s) 176
Hin1II CATG 1 cut(s) 185
HincII GTYRAC 1 cut(s) 55
HindII GTYRAC 1 cut(s) 55
HpaII CCGG 1 cut(s) 176
HphI GGTGA 1 cut(s) 125
Hpy166II GTNNAC 1 cut(s) 55
Hpy188I TCNGA 1 cut(s) 22
Hpy8I GTNNAC 1 cut(s) 55
HpyAV CCTTC 1 cut(s) 263
HpyCH4V TGCA 2 cut(s) 101, 225
HpyF3I CTNAG 1 cut(s) 147
Hsp92II CATG 1 cut(s) 185
Ksp22I TGATCA 1 cut(s) 115
Kzo9I GATC 2 cut(s) 115, 150
LpnPI CCDG 3 cut(s) 51, 189, 199
MalI GATC 2 cut(s) 117, 152
MboI GATC 2 cut(s) 115, 150
MboII GAAGA 1 cut(s) 254
MhlI GDGCHC 1 cut(s) 281
MnlI CCTC 5 cut(s) 45, 104, 226, 253, 287
MspI CCGG 1 cut(s) 176
MspR9I CCNGG 1 cut(s) 177
NciI CCSGG 1 cut(s) 177
NdeII GATC 2 cut(s) 115, 150
NlaIII CATG 1 cut(s) 185
NspI RCATGY 1 cut(s) 185
PciI ACATGT 1 cut(s) 181
PscI ACATGT 1 cut(s) 181
PsiI TTATAA 1 cut(s) 15
Sau3AI GATC 2 cut(s) 115, 150
ScrFI CCNGG 1 cut(s) 177
SduI GDGCHC 1 cut(s) 281
SetI ASST 3 cut(s) 115, 132, 264
SgeI CNNG 9 cut(s) 50, 99, 119, 139, 179, 188, 189, 194, 226
StyD4I CCNGG 1 cut(s) 175
TaqI TCGA 1 cut(s) 189
TscAI CASTG 1 cut(s) 88
TspDTI ATGAA 1 cut(s) 213
TspRI CASTG 1 cut(s) 88
XceI RCATGY 1 cut(s) 185
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.