No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G13690 |
| fragaria_vesca | FvH4_4g00420 |
| malus_domestica | MD04G1004500.v1.1 |
| prunus_persica | Prupe.1G004200_v2.0.a1 Prupe.1G004200_v2.0.a1 |
| pyrus_communis | pycom04g00460 |
| rosa_chinensis | RchiOBHm_Chr4g0385541 RchiOBHm_Chr6g0244431 |
| rosa_laevigata | RLG00000010211 RLG00000010214 RLG00000010217 RLG00000010226 RLG00000015361 |
| rosa_multiflora | Rmu_co8490289.1_g000001 Rmu_sc0004773.1_g000001 Rmu_sc0004773.1_g000003 Rmu_sc0008728.1_g000011 |
| rosa_roxburghii | Rroxscaffold_5G00333320 Rroxscaffold_5G00333430 Rroxscaffold_5G00333450 Rroxscaffold_7G00215830 |
| rosa_rugosa | Rorug03G0301200 Rorug03G0301300 Rorug05G0508600 |
| rosa_samantha | Rh4AG004600 Rh4AG005000 Rh4AG005800 Rh4AG006700 Rh4BG004200 Rh4CG007200 Rh4DG006100 Rh6AG023700 Rh6BG018900 |
| rosa_wichuraiana | Rw4G000380 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 130 |
| AciI | CCGC | 1 cut(s) | 130 |
| AclWI | GGATC | 1 cut(s) | 159 |
| AcoI | YGGCCR | 1 cut(s) | 131 |
| AcsI | RAATTY | 1 cut(s) | 245 |
| AcuI | CTGAAG | 1 cut(s) | 107 |
| AflIII | ACRYGT | 1 cut(s) | 478 |
| AgsI | TTSAA | 1 cut(s) | 242 |
| AluBI | AGCT | 1 cut(s) | 430 |
| AluI | AGCT | 1 cut(s) | 430 |
| Alw26I | GTCTC | 3 cut(s) | 52, 343, 458 |
| AlwI | GGATC | 1 cut(s) | 159 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 85 |
| AoxI | GGCC | 2 cut(s) | 131, 192 |
| ApoI | RAATTY | 1 cut(s) | 245 |
| AspS9I | GGNCC | 1 cut(s) | 171 |
| AsuC2I | CCSGG | 1 cut(s) | 474 |
| AsuHPI | GGTGA | 3 cut(s) | 133, 311, 425 |
| AvaII | GGWCC | 1 cut(s) | 171 |
| BanII | GRGCYC | 1 cut(s) | 584 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 312, 344 |
| BccI | CCATC | 1 cut(s) | 359 |
| BclI | TGATCA | 2 cut(s) | 415, 487 |
| BcnI | CCSGG | 1 cut(s) | 474 |
| BcoDI | GTCTC | 3 cut(s) | 52, 343, 458 |
| BfmI | CTRYAG | 1 cut(s) | 225 |
| BglII | AGATCT | 1 cut(s) | 160 |
| BisI | GCNGC | 1 cut(s) | 131 |
| BlsI | GCNGC | 1 cut(s) | 132 |
| Bme1390I | CCNGG | 1 cut(s) | 474 |
| Bme18I | GGWCC | 1 cut(s) | 171 |
| BmgT120I | GGNCC | 1 cut(s) | 171 |
| BmiI | GGNNCC | 1 cut(s) | 172 |
| BmrFI | CCNGG | 1 cut(s) | 474 |
| BmsI | GCATC | 1 cut(s) | 25 |
| BpuMI | CCSGG | 1 cut(s) | 474 |
| BsaI | GGTCTC | 1 cut(s) | 52 |
| BseGI | GGATG | 1 cut(s) | 376 |
| BseMII | CTCAG | 1 cut(s) | 438 |
| Bsh1236I | CGCG | 1 cut(s) | 130 |
| BshFI | GGCC | 2 cut(s) | 133, 194 |
| BsiSI | CCGG | 1 cut(s) | 473 |
| BslFI | GGGAC | 2 cut(s) | 489, 530 |
| BsmAI | GTCTC | 3 cut(s) | 52, 343, 458 |
| BsmFI | GGGAC | 2 cut(s) | 489, 530 |
| BsnI | GGCC | 2 cut(s) | 133, 194 |
| Bso31I | GGTCTC | 1 cut(s) | 52 |
| Bsp1286I | GDGCHC | 1 cut(s) | 584 |
| Bsp143I | GATC | 4 cut(s) | 151, 160, 415, 487 |
| BspACI | CCGC | 1 cut(s) | 130 |
| BspANI | GGCC | 2 cut(s) | 133, 194 |
| BspCNI | CTCAG | 1 cut(s) | 439 |
| BspFNI | CGCG | 1 cut(s) | 130 |
| BspLI | GGNNCC | 1 cut(s) | 172 |
| BspPI | GGATC | 1 cut(s) | 159 |
| BspTNI | GGTCTC | 1 cut(s) | 52 |
| BssMI | GATC | 4 cut(s) | 151, 160, 415, 487 |
| Bst4CI | ACNGT | 1 cut(s) | 115 |
| Bst6I | CTCTTC | 1 cut(s) | 212 |
| BstDEI | CTNAG | 2 cut(s) | 164, 447 |
| BstF5I | GGATG | 1 cut(s) | 376 |
| BstFNI | CGCG | 1 cut(s) | 130 |
| BstKTI | GATC | 4 cut(s) | 154, 163, 418, 490 |
| BstMAI | GTCTC | 3 cut(s) | 52, 343, 458 |
| BstMBI | GATC | 4 cut(s) | 151, 160, 415, 487 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 58 |
| BstNSI | RCATGY | 1 cut(s) | 482 |
| BstSCI | CCNGG | 1 cut(s) | 472 |
| BstSFI | CTRYAG | 1 cut(s) | 225 |
| BstUI | CGCG | 1 cut(s) | 130 |
| BstX2I | RGATCY | 2 cut(s) | 151, 160 |
| BstYI | RGATCY | 2 cut(s) | 151, 160 |
| BsuRI | GGCC | 2 cut(s) | 133, 194 |
| BtsCI | GGATG | 1 cut(s) | 376 |
| BtsI | GCAGTG | 1 cut(s) | 381 |
| BtsIMutI | CAGTG | 3 cut(s) | 174, 255, 381 |
| CaiI | CAGNNNCTG | 1 cut(s) | 85 |
| Cfr13I | GGNCC | 1 cut(s) | 171 |
| CviAII | CATG | 1 cut(s) | 479 |
| CviJI | RGCY | 7 cut(s) | 85, 133, 194, 430, 446, 510, 582 |
| CviKI_1 | RGCY | 7 cut(s) | 85, 133, 194, 430, 446, 510, 582 |
| DdeI | CTNAG | 2 cut(s) | 164, 447 |
| DpnI | GATC | 4 cut(s) | 153, 162, 417, 489 |
| DpnII | GATC | 4 cut(s) | 151, 160, 415, 487 |
| EaeI | YGGCCR | 1 cut(s) | 131 |
| Eam1104I | CTCTTC | 1 cut(s) | 212 |
| EarI | CTCTTC | 1 cut(s) | 212 |
| Eco24I | GRGCYC | 1 cut(s) | 584 |
| Eco31I | GGTCTC | 1 cut(s) | 52 |
| Eco47I | GGWCC | 1 cut(s) | 171 |
| Eco57I | CTGAAG | 1 cut(s) | 107 |
| EcoT38I | GRGCYC | 1 cut(s) | 584 |
| FaeI | CATG | 1 cut(s) | 482 |
| FaiI | YATR | 6 cut(s) | 263, 458, 480, 486, 495, 527 |
| FaqI | GGGAC | 2 cut(s) | 489, 530 |
| FatI | CATG | 1 cut(s) | 478 |
| FbaI | TGATCA | 2 cut(s) | 415, 487 |
| Fnu4HI | GCNGC | 1 cut(s) | 131 |
| FokI | GGATG | 1 cut(s) | 383 |
| FriOI | GRGCYC | 1 cut(s) | 584 |
| Fsp4HI | GCNGC | 1 cut(s) | 131 |
| GluI | GCNGC | 1 cut(s) | 131 |
| HaeIII | GGCC | 2 cut(s) | 133, 194 |
| HapII | CCGG | 1 cut(s) | 473 |
| Hin1II | CATG | 1 cut(s) | 482 |
| HinfI | GANTC | 2 cut(s) | 335, 451 |
| HpaII | CCGG | 1 cut(s) | 473 |
| HphI | GGTGA | 3 cut(s) | 133, 311, 425 |
| Hpy166II | GTNNAC | 2 cut(s) | 16, 174 |
| Hpy188I | TCNGA | 3 cut(s) | 67, 76, 156 |
| Hpy188III | TCNNGA | 3 cut(s) | 99, 314, 339 |
| Hpy8I | GTNNAC | 2 cut(s) | 16, 174 |
| Hpy99I | CGWCG | 1 cut(s) | 145 |
| HpyAV | CCTTC | 2 cut(s) | 435, 566 |
| HpyCH4III | ACNGT | 1 cut(s) | 115 |
| HpyCH4V | TGCA | 2 cut(s) | 401, 522 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 58 |
| HpyF3I | CTNAG | 2 cut(s) | 164, 447 |
| Hsp92II | CATG | 1 cut(s) | 482 |
| Ksp22I | TGATCA | 2 cut(s) | 415, 487 |
| Kzo9I | GATC | 4 cut(s) | 151, 160, 415, 487 |
| LpnPI | CCDG | 6 cut(s) | 84, 282, 327, 345, 486, 496 |
| LweI | GCATC | 1 cut(s) | 25 |
| MalI | GATC | 4 cut(s) | 153, 162, 417, 489 |
| MboI | GATC | 4 cut(s) | 151, 160, 415, 487 |
| MboII | GAAGA | 3 cut(s) | 229, 332, 557 |
| MflI | RGATCY | 2 cut(s) | 151, 160 |
| MhlI | GDGCHC | 1 cut(s) | 584 |
| MluCI | AATT | 4 cut(s) | 94, 186, 245, 291 |
| MlyI | GAGTC | 1 cut(s) | 460 |
| MnlI | CCTC | 7 cut(s) | 75, 184, 197, 404, 523, 556, 590 |
| MseI | TTAA | 2 cut(s) | 117, 249 |
| MslI | CAYNNNNRTG | 1 cut(s) | 483 |
| MspI | CCGG | 1 cut(s) | 473 |
| MspR9I | CCNGG | 1 cut(s) | 474 |
| MvnI | CGCG | 1 cut(s) | 130 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 58 |
| NciI | CCSGG | 1 cut(s) | 474 |
| NdeII | GATC | 4 cut(s) | 151, 160, 415, 487 |
| NlaIII | CATG | 1 cut(s) | 482 |
| NlaIV | GGNNCC | 1 cut(s) | 172 |
| NspI | RCATGY | 1 cut(s) | 482 |
| PciI | ACATGT | 1 cut(s) | 478 |
| PfeI | GAWTC | 1 cut(s) | 335 |
| PkrI | GCNGC | 1 cut(s) | 132 |
| PleI | GAGTC | 1 cut(s) | 459 |
| PpsI | GAGTC | 1 cut(s) | 459 |
| PscI | ACATGT | 1 cut(s) | 478 |
| PspN4I | GGNNCC | 1 cut(s) | 172 |
| PspPI | GGNCC | 1 cut(s) | 171 |
| PstNI | CAGNNNCTG | 1 cut(s) | 85 |
| PsuI | RGATCY | 2 cut(s) | 151, 160 |
| RseI | CAYNNNNRTG | 1 cut(s) | 483 |
| SaqAI | TTAA | 2 cut(s) | 117, 249 |
| SatI | GCNGC | 1 cut(s) | 131 |
| Sau3AI | GATC | 4 cut(s) | 151, 160, 415, 487 |
| Sau96I | GGNCC | 1 cut(s) | 171 |
| SchI | GAGTC | 1 cut(s) | 460 |
| ScrFI | CCNGG | 1 cut(s) | 474 |
| SduI | GDGCHC | 1 cut(s) | 584 |
| SetI | ASST | 5 cut(s) | 48, 123, 415, 432, 567 |
| SfaNI | GCATC | 1 cut(s) | 25 |
| SfcI | CTRYAG | 1 cut(s) | 225 |
| SinI | GGWCC | 1 cut(s) | 171 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 483 |
| Sse9I | AATT | 4 cut(s) | 94, 186, 245, 291 |
| SsiI | CCGC | 1 cut(s) | 130 |
| StyD4I | CCNGG | 1 cut(s) | 472 |
| TaaI | ACNGT | 1 cut(s) | 115 |
| TasI | AATT | 4 cut(s) | 94, 186, 245, 291 |
| TauI | GCSGC | 1 cut(s) | 133 |
| TfiI | GAWTC | 1 cut(s) | 335 |
| Tru1I | TTAA | 2 cut(s) | 117, 249 |
| Tru9I | TTAA | 2 cut(s) | 117, 249 |
| TscAI | CASTG | 3 cut(s) | 181, 262, 388 |
| TspDTI | ATGAA | 3 cut(s) | 333, 510, 558 |
| TspRI | CASTG | 3 cut(s) | 181, 262, 388 |
| VpaK11BI | GGWCC | 1 cut(s) | 171 |
| XapI | RAATTY | 1 cut(s) | 245 |
| XceI | RCATGY | 1 cut(s) | 482 |