Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0002861

Physical Location & Seq

Genomic Coordinates Reverse (-)

3378130 .. 3380383

Gene Structure 2254 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000010659

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2151 bp

ATGCTACTGCAAATCAACAATGCAGTGTCAAATGCTGAGGAATACCAGACATATATCATCCACATGGACCATTCCCAAAAACCTGCATCTTTCTTAACACATGAGGCATGGCATCGGTCCACCTTAACATCATTAATGCGATCATCTCCTGAAGAACATGATGAGAACGAAATGTTCTTGTACTCATACAACCATGTCATGCACGGCTTCAGTGCAAGGCTCACAGCAACTCAGCTGTCGGAATTGGAGAAATCTCCAGCTCATGTTGCCACACACCCGCAGTTGTTTCTTGAGCCACTCACAACACACAGCCCCAAGTTTCTCGGACTGAAACAGAACTCTGGCATATGGCCAGCTGCGTCTTTTGGCAAAGACGTGATTATAGGTATCATCGATACTGGAATTTGGCCAGAGAGTGAGAGCTTCAATGATAAAGGAATGGCAGAAGTTCCACAGAGATGGAAAGGCACGTGTGAAAATGGAACGGAATTTAGCCCATCTCTCTGCAACAGGAAGCTCATAGGGGCACGTTCTTTTAGCAAAGGGCTCCAAGCTGAAGGCCTAAAAATCCCACCATTTGACTATAATTCACCAAGAGACCACAGTGGTCATGGAACCCACACATCATCAACTGCTGCAGGTAACCATGTAGTCGGTGCAAGTCAATTTGGCTATGCAAAAGGCACGGCAAGAGGTGTGGCGCTGCGTGCGCATGTTGCCATGTACAAGGTTCTCTGGGGAGTAGAAACAGAAAAGAGTACAGCTACTGATTTGCTAGCTGCCATGGACCAGGCAATTTCCGACGGAGTTGATATCATATCAATATCTCTTCGCATAAGCCTGCGGGAAGATCCTCCTTATTTCAATAACGTCATTTCCAGTGCTTCTCTTTCAGCAGCTGAGAAAGGAATTGTTGTTGTCTGTGCCGCTGGGAATCAGGGTGCCCCGAACTCAATATACAATGGAGCACCCTGGATCACAACAGTAGGAGCTGGCACACTCGATCGTAGTTTCACTGCAACAATGACTCCAGAAAATGGGTTAACAGTTGAAGGAACATCATACTTCCCAGAGAGCGTTTACATTACTGATGCACCATTATACTATGGGAAAGACAATGTGAGCAAAGCAATGTGCTACTATGGGGAATTGGATCATAAAGAAGTTGCTGGAAAGGTAGTCTTATGTGATAATCCTGCCGAGAGCCAGATAGACATTGAAGGACAAAAGGAAGAGGTAGAGAGGGCAGGTGCTTATGCTGGAATCTTCATCACGGATCTCTCATTTTTACATCCCTCCGACTACACCATTGCTGCTATGATTCTGCCATTTGCTACAGGTGCCTTGGTTAGAGATCACGCCACACAGGTCGATACAACCAAAGTTAAGAGCATCACATTTGTTCACACCAACTTGGGAACAAAACCAGCACCACAAGTGGCAAGTTTCTCTTCAAGAGGACCAGACTCAATCACTCCAGGTATTCTAAAACCAGACATTCTTGCCCCAGGGGTCGATGTGCTGGCTGCAGTGAAACCAGACAAGCCATTCATGGAACTAAAGAATTACAATTTAGTGACAGATTATGCACTAAAATCAGGGACATCAATGGCAGCACCCCATGTCGCTGGCGTAGCAGCATTGTTAAAATCTGTTCACCCAGAATGGAGCCCAGCAGCCATCAGATCAGCAATCATGACCACAGCATGCACAGTCGACAACAATCACACCACCATAAAAGACGAATCAGATGGTCTTCCAGCCACACCATTGGACTTTGGGGCAGGCCACATCAATCCAAATAAGGCCATGAACCCGGGACTAGTCTATGACATGAATGTGCAAGACTACATTGAGTTTCTATGTACCCTGGGCGGCACAGACTCTCCGAGAACCAAAAGCTTTAGCAGGGTTGTGACAAACGTGGGAGATGACACATCAATTTACCGAGCAATTCTACAAATTCCTAGTGGGATGAGGATAACAGTAGAGCCTAGAACTCTGACATTCACTAAAAAGTATCAGCAGCAAGGTTTTGTTTTGAACGTAGAGATCGACAGTGATGCTCCGAAGGTGATCTATGGTTATCTCAAATGGGTTGATCAACATGATCACATTGTATCAAGTCCCGTAGTGGCCCTTAATAACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8

Protein Analysis

717

Amino Acids

77.6

Weight (kDa)

5.66

Isoelectric Point (pI)

35.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	17 - 87	7.1e-16	Peptidase inhibitor I9
Peptidase_S8	PF00082	123 - 578	1.7e-45	Subtilase family
fn3_6	PF17766	628 - 712	4e-19	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002861)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g34120 FvH4_2g34130 FvH4_2g34150 FvH4_2g34210 FvH4_2g34211 FvH4_2g34212
malus_domestica	MD05G1275700.v1.1 MD05G1275800.v1.1 MD08G1098000.v1.1 MD15G1080200.v1.1 MD15G1080300.v1.1
prunus_persica	Prupe.1G433100_v2.0.a1 Prupe.1G433200_v2.0.a1
pyrus_communis	pycom15g07460
rosa_chinensis	RchiOBHm_Chr6g0308201 RchiOBHm_Chr6g0308211 RchiOBHm_Chr6g0308221
rosa_laevigata	RLG00000010657 RLG00000010658 RLG00000010659
rosa_multiflora	Rmu_sc0005706.1_g000017 Rmu_sc0005706.1_g000018 Rmu_ssc0000355.1_g000001 Rmu_ssc0000355.1_g000006
rosa_roxburghii	Rroxscaffold_7G00160340 Rroxscaffold_7G00160360 Rroxscaffold_7G00160440 Rroxscaffold_7G00160450
rosa_rugosa	Rorug01G0005200 Rorug01G0066300 Rorug06G0364700 Rorug06G0364800 Rorug06G0364900
rosa_samantha	Rh6DG475900 Rh6DG476100 Rh6DG476300
rosa_wichuraiana	Rw6G041330 Rw6G041340 Rw6G041350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1238
Acc16I	TGCGCA	1 cut(s)	711
Acc36I	ACCTGC	3 cut(s)	91, 629, 1238
AccB1I	GGYRCC	2 cut(s)	941, 1340
AccB7I	CCANNNNNTGG	1 cut(s)	1037
AccI	GTMKAC	1 cut(s)	1716
AciI	CCGC	4 cut(s)	278, 844, 927, 1875
AclWI	GGATC	4 cut(s)	845, 983, 1161, 1284
AcoI	YGGCCR	2 cut(s)	350, 407
AcsI	RAATTY	3 cut(s)	402, 488, 1962
AcuI	CTGAAG	3 cut(s)	171, 193, 576
AcvI	CACGTG	1 cut(s)	471
AfaI	GTAC	4 cut(s)	182, 725, 760, 1867
AfiI	CCNNNNNNNGG	1 cut(s)	1037
AflIII	ACRYGT	1 cut(s)	470
AgsI	TTSAA	6 cut(s)	427, 865, 1052, 1220, 1455, 2044
AhlI	ACTAGT	1 cut(s)	1822
AjiI	CACGTC	1 cut(s)	376
AjnI	CCWGG	5 cut(s)	789, 971, 1477, 1507, 1869
Alw21I	GWGCWC	1 cut(s)	970
Alw26I	GTCTC	1 cut(s)	591
AlwI	GGATC	4 cut(s)	845, 983, 1161, 1284
AlwNI	CAGNNNCTG	2 cut(s)	767, 899
Ama87I	CYCGRG	1 cut(s)	1816
AoxI	GGCC	6 cut(s)	350, 407, 559, 1786, 1806, 2136
ApoI	RAATTY	3 cut(s)	402, 488, 1962
AseI	ATTAAT	1 cut(s)	134
AspLEI	GCGC	2 cut(s)	703, 712
AspS9I	GGNCC	5 cut(s)	67, 117, 787, 1460, 2137
AsuC2I	CCSGG	2 cut(s)	1817, 1818
AsuHPI	GGTGA	3 cut(s)	582, 1649, 2086
AsuNHI	GCTAGC	1 cut(s)	775
AvaI	CYCGRG	1 cut(s)	1816
AvaII	GGWCC	4 cut(s)	67, 117, 787, 1460
BaeGI	GKGCMC	2 cut(s)	529, 946
BalI	TGGCCA	2 cut(s)	352, 409
BanI	GGYRCC	2 cut(s)	941, 1340
BanII	GRGCYC	2 cut(s)	549, 1673
BbrPI	CACGTG	1 cut(s)	471
BbsI	GAAGAC	1 cut(s)	1748
Bbv12I	GWGCWC	1 cut(s)	970
BbvCI	CCTCAGC	1 cut(s)	36
BccI	CCATC	4 cut(s)	453, 505, 1688, 1745
BceAI	ACGGC	2 cut(s)	220, 702
BcgI	CGANNNNNNTGC	2 cut(s)	2045, 2079
BciT130I	CCWGG	5 cut(s)	791, 973, 1479, 1509, 1871
BclI	TGATCA	2 cut(s)	2101, 2110
BcnI	CCSGG	2 cut(s)	1817, 1818
BcoDI	GTCTC	1 cut(s)	591
BcuI	ACTAGT	1 cut(s)	1822
BfaI	CTAG	5 cut(s)	776, 1823, 1968, 1995, 2149
BfmI	CTRYAG	3 cut(s)	636, 1335, 1527
BfoI	RGCGCY	1 cut(s)	704
BfuAI	ACCTGC	3 cut(s)	91, 629, 1238
Bme1390I	CCNGG	7 cut(s)	791, 973, 1479, 1509, 1817, 1818, 1871
Bme18I	GGWCC	4 cut(s)	67, 117, 787, 1460
BmeT110I	CYCGRG	1 cut(s)	1816
BmgBI	CACGTC	1 cut(s)	376
BmgT120I	GGNCC	5 cut(s)	67, 117, 787, 1460, 2137
BmiI	GGNNCC	5 cut(s)	548, 616, 943, 1342, 1670
BmrFI	CCNGG	7 cut(s)	791, 973, 1479, 1509, 1817, 1818, 1871
BmsI	GCATC	5 cut(s)	95, 121, 1081, 1401, 2053
BmtI	GCTAGC	1 cut(s)	779
BpiI	GAAGAC	1 cut(s)	1748
BpmI	CTGGAG	3 cut(s)	240, 1014, 1461
Bpu10I	CCTNAGC	1 cut(s)	36
BpuEI	CTTGAG	1 cut(s)	311
BpuMI	CCSGG	2 cut(s)	1817, 1818
Bsa29I	ATCGAT	1 cut(s)	393
BsaAI	YACGTR	1 cut(s)	471
BsaI	GGTCTC	1 cut(s)	591
BsaJI	CCNNGG	8 cut(s)	783, 971, 1344, 1507, 1508, 1816, 1869, 1870
BsaXI	ACNNNNNCTCC	4 cut(s)	1012, 1042, 1870, 1900
Bsc4I	CCNNNNNNNGG	1 cut(s)	1037
Bse1I	ACTGG	2 cut(s)	403, 879
Bse3DI	GCAATG	2 cut(s)	1137, 1308
BseBI	CCWGG	5 cut(s)	791, 973, 1479, 1509, 1871
BseCI	ATCGAT	1 cut(s)	393
BseDI	CCNNGG	8 cut(s)	783, 971, 1344, 1507, 1508, 1816, 1869, 1870
BseGI	GGATG	3 cut(s)	57, 1291, 1980
BseLI	CCNNNNNNNGG	1 cut(s)	1037
BseMI	GCAATG	2 cut(s)	1137, 1308
BseMII	CTCAG	3 cut(s)	27, 245, 891
BseNI	ACTGG	2 cut(s)	403, 879
BseSI	GKGCMC	2 cut(s)	529, 946
BseYI	CCCAGC	2 cut(s)	929, 1672
Bsh1285I	CGRYCG	1 cut(s)	1006
BshFI	GGCC	6 cut(s)	352, 409, 561, 1788, 1808, 2138
BshNI	GGYRCC	2 cut(s)	941, 1340
BshVI	ATCGAT	1 cut(s)	393
BsiEI	CGRYCG	1 cut(s)	1006
BsiHKAI	GWGCWC	1 cut(s)	970
BsiHKCI	CYCGRG	1 cut(s)	1816
BsiSI	CCGG	1 cut(s)	1817
BslFI	GGGAC	3 cut(s)	1615, 1833, 2112
BslI	CCNNNNNNNGG	1 cut(s)	1037
BsmAI	GTCTC	1 cut(s)	591
BsmFI	GGGAC	3 cut(s)	1615, 1833, 2112
BsnI	GGCC	6 cut(s)	352, 409, 561, 1788, 1808, 2138
Bso31I	GGTCTC	1 cut(s)	591
BsoBI	CYCGRG	1 cut(s)	1816
Bsp1286I	GDGCHC	5 cut(s)	529, 549, 946, 970, 1673
Bsp1407I	TGTACA	1 cut(s)	723
Bsp19I	CCATGG	1 cut(s)	783
BspACI	CCGC	4 cut(s)	278, 844, 927, 1875
BspANI	GGCC	6 cut(s)	352, 409, 561, 1788, 1808, 2138
BspCNI	CTCAG	3 cut(s)	28, 244, 892
BspDI	ATCGAT	1 cut(s)	393
BspHI	TCATGA	1 cut(s)	1695
BspLI	GGNNCC	5 cut(s)	548, 616, 943, 1342, 1670
BspMAI	CTGCAG	2 cut(s)	640, 1531
BspMI	ACCTGC	3 cut(s)	91, 629, 1238
BspOI	GCTAGC	1 cut(s)	779
BspPI	GGATC	4 cut(s)	845, 983, 1161, 1284
BspT107I	GGYRCC	2 cut(s)	941, 1340
BspTNI	GGTCTC	1 cut(s)	591
BsrDI	GCAATG	2 cut(s)	1137, 1308
BsrGI	TGTACA	1 cut(s)	723
BsrI	ACTGG	2 cut(s)	403, 879
BssECI	CCNNGG	8 cut(s)	783, 971, 1344, 1507, 1508, 1816, 1869, 1870
BssT1I	CCWWGG	2 cut(s)	783, 1344
Bst2UI	CCWGG	5 cut(s)	791, 973, 1479, 1509, 1871
Bst4CI	ACNGT	6 cut(s)	605, 985, 1048, 1714, 1987, 2060
Bst6I	CTCTTC	3 cut(s)	834, 1227, 1456
BstAUI	TGTACA	1 cut(s)	723
BstBAI	YACGTR	1 cut(s)	471
BstC8I	GCNNGC	9 cut(s)	354, 708, 777, 842, 994, 1524, 1630, 1708, 1786
BstDEI	CTNAG	3 cut(s)	36, 231, 900
BstDSI	CCRYGG	1 cut(s)	783
BstEII	GGTNACC	1 cut(s)	641
BstF5I	GGATG	3 cut(s)	57, 1291, 1980
BstH2I	RGCGCY	1 cut(s)	704
BstHHI	GCGC	2 cut(s)	703, 712
BstMAI	GTCTC	1 cut(s)	591
BstMCI	CGRYCG	1 cut(s)	1006
BstMWI	GCNNNNNNNGC	6 cut(s)	266, 707, 709, 716, 1340, 1634
BstNI	CCWGG	5 cut(s)	791, 973, 1479, 1509, 1871
BstNSI	RCATGY	2 cut(s)	716, 1710
BstPI	GGTNACC	1 cut(s)	641
BstSCI	CCNGG	7 cut(s)	789, 971, 1477, 1507, 1815, 1816, 1869
BstSFI	CTRYAG	3 cut(s)	636, 1335, 1527
BstSLI	GKGCMC	2 cut(s)	529, 946
BstV2I	GAAGAC	1 cut(s)	1748
BstX2I	RGATCY	2 cut(s)	850, 1276
BstXI	CCANNNNNNTGG	3 cut(s)	459, 1628, 1771
BstYI	RGATCY	2 cut(s)	850, 1276
Bsu15I	ATCGAT	1 cut(s)	393
BsuRI	GGCC	6 cut(s)	352, 409, 561, 1788, 1808, 2138
BsuTUI	ATCGAT	1 cut(s)	393
BtgI	CCRYGG	1 cut(s)	783
BtrI	CACGTC	1 cut(s)	376
BtsCI	GGATG	3 cut(s)	57, 1291, 1980
BtsI	GCAGTG	3 cut(s)	30, 1014, 1536
BtsIMutI	CAGTG	7 cut(s)	30, 217, 610, 886, 1014, 1536, 2065
BveI	ACCTGC	3 cut(s)	91, 629, 1238
Cac8I	GCNNGC	9 cut(s)	354, 708, 777, 842, 994, 1524, 1630, 1708, 1786
CaiI	CAGNNNCTG	2 cut(s)	767, 899
CciI	TCATGA	1 cut(s)	1695
CfoI	GCGC	2 cut(s)	703, 712
Cfr13I	GGNCC	5 cut(s)	67, 117, 787, 1460, 2137
Cfr9I	CCCGGG	1 cut(s)	1816
ClaI	ATCGAT	1 cut(s)	393
CseI	GACGC	1 cut(s)	348
Csp6I	GTAC	4 cut(s)	181, 724, 759, 1866
CspCI	CAANNNNNGTGG	2 cut(s)	678, 713
CviQI	GTAC	4 cut(s)	181, 724, 759, 1866
DdeI	CTNAG	3 cut(s)	36, 231, 900
EaeI	YGGCCR	2 cut(s)	350, 407
Eam1104I	CTCTTC	3 cut(s)	834, 1227, 1456
EarI	CTCTTC	3 cut(s)	834, 1227, 1456
Eco130I	CCWWGG	2 cut(s)	783, 1344
Eco147I	AGGCCT	1 cut(s)	561
Eco24I	GRGCYC	2 cut(s)	549, 1673
Eco31I	GGTCTC	1 cut(s)	591
Eco32I	GATATC	1 cut(s)	814
Eco47I	GGWCC	4 cut(s)	67, 117, 787, 1460
Eco57I	CTGAAG	3 cut(s)	171, 193, 576
Eco72I	CACGTG	1 cut(s)	471
Eco88I	CYCGRG	1 cut(s)	1816
Eco91I	GGTNACC	1 cut(s)	641
EcoO65I	GGTNACC	1 cut(s)	641
EcoRII	CCWGG	5 cut(s)	789, 971, 1477, 1507, 1869
EcoRV	GATATC	1 cut(s)	814
EcoT14I	CCWWGG	2 cut(s)	783, 1344
EcoT38I	GRGCYC	2 cut(s)	549, 1673
ErhI	CCWWGG	2 cut(s)	783, 1344
FalI	AAGNNNNNCTT	4 cut(s)	1166, 1198, 1435, 1467
FaqI	GGGAC	3 cut(s)	1615, 1833, 2112
FauI	CCCGC	2 cut(s)	285, 837
FauNDI	CATATG	1 cut(s)	347
FbaI	TGATCA	2 cut(s)	2101, 2110
FblI	GTMKAC	1 cut(s)	1716
FokI	GGATG	3 cut(s)	44, 1278, 1987
FriOI	GRGCYC	2 cut(s)	549, 1673
FspAI	RTGCGCAY	1 cut(s)	711
FspBI	CTAG	5 cut(s)	776, 1823, 1968, 1995, 2149
FspI	TGCGCA	1 cut(s)	711
GlaI	GCGC	2 cut(s)	702, 711
GsaI	CCCAGC	2 cut(s)	933, 1676
GsuI	CTGGAG	3 cut(s)	240, 1014, 1461
HaeII	RGCGCY	1 cut(s)	704
HaeIII	GGCC	6 cut(s)	352, 409, 561, 1788, 1808, 2138
HapII	CCGG	1 cut(s)	1817
HgaI	GACGC	1 cut(s)	348
HhaI	GCGC	2 cut(s)	703, 712
Hin6I	GCGC	2 cut(s)	701, 710
HinP1I	GCGC	2 cut(s)	701, 710
HincII	GTYRAC	2 cut(s)	1044, 1717
HindII	GTYRAC	2 cut(s)	1044, 1717
HindIII	AAGCTT	1 cut(s)	1900
HinfI	GANTC	7 cut(s)	934, 1027, 1263, 1321, 1466, 1745, 1883
HpaI	GTTAAC	1 cut(s)	1044
HpaII	CCGG	1 cut(s)	1817
HphI	GGTGA	3 cut(s)	582, 1649, 2086
Hpy166II	GTNNAC	6 cut(s)	120, 1044, 1081, 1405, 1657, 1717
Hpy188I	TCNGA	9 cut(s)	241, 326, 802, 1300, 1685, 1750, 1890, 2004, 2070
Hpy188III	TCNNGA	5 cut(s)	149, 290, 1031, 1455, 1696
Hpy8I	GTNNAC	6 cut(s)	120, 1044, 1081, 1405, 1657, 1717
Hpy99I	CGWCG	1 cut(s)	806
HpyAV	CCTTC	4 cut(s)	551, 1046, 1214, 2065
HpyCH4III	ACNGT	6 cut(s)	605, 985, 1048, 1714, 1987, 2060
HpyCH4IV	ACGT	6 cut(s)	375, 470, 529, 870, 1923, 2046
HpyF10VI	GCNNNNNNNGC	6 cut(s)	266, 707, 709, 716, 1340, 1634
HpyF3I	CTNAG	3 cut(s)	36, 231, 900
HpySE526I	ACGT	6 cut(s)	375, 470, 529, 870, 1923, 2046
HspAI	GCGC	2 cut(s)	701, 710
Ksp22I	TGATCA	2 cut(s)	2101, 2110
KspAI	GTTAAC	1 cut(s)	1044
LmnI	GCTCC	5 cut(s)	552, 965, 989, 1668, 2071
LweI	GCATC	5 cut(s)	95, 121, 1081, 1401, 2053
MaeI	CTAG	5 cut(s)	776, 1823, 1968, 1995, 2149
MaeII	ACGT	6 cut(s)	375, 470, 529, 870, 1923, 2046
MaeIII	GTNAC	3 cut(s)	641, 1576, 1915
MboII	GAAGA	7 cut(s)	164, 821, 860, 1244, 1258, 1443, 1748
MflI	RGATCY	2 cut(s)	850, 1276
MhlI	GDGCHC	5 cut(s)	529, 549, 946, 970, 1673
MlsI	TGGCCA	2 cut(s)	352, 409
MluNI	TGGCCA	2 cut(s)	352, 409
MlyI	GAGTC	3 cut(s)	1021, 1460, 1877
MmeI	TCCRAC	3 cut(s)	219, 825, 1323
MnlI	CCTC	9 cut(s)	31, 97, 686, 864, 1228, 1236, 1306, 1451, 1971
Mox20I	TGGCCA	2 cut(s)	352, 409
MscI	TGGCCA	2 cut(s)	352, 409
MseI	TTAA	7 cut(s)	95, 125, 134, 1043, 1386, 1646, 2142
MslI	CAYNNNNRTG	3 cut(s)	62, 457, 1838
Msp20I	TGGCCA	2 cut(s)	352, 409
MspA1I	CMGCKG	4 cut(s)	235, 356, 899, 929
MspI	CCGG	1 cut(s)	1817
MspR9I	CCNGG	7 cut(s)	791, 973, 1479, 1509, 1817, 1818, 1871
MvaI	CCWGG	5 cut(s)	791, 973, 1479, 1509, 1871
MwoI	GCNNNNNNNGC	6 cut(s)	266, 707, 709, 716, 1340, 1634
NciI	CCSGG	2 cut(s)	1817, 1818
NcoI	CCATGG	1 cut(s)	783
NdeI	CATATG	1 cut(s)	347
NheI	GCTAGC	1 cut(s)	775
NlaIV	GGNNCC	5 cut(s)	548, 616, 943, 1342, 1670
NmeAIII	GCCGAG	1 cut(s)	1225
NmuCI	GTSAC	2 cut(s)	1576, 1915
NsbI	TGCGCA	1 cut(s)	711
NspI	RCATGY	2 cut(s)	716, 1710
PaeI	GCATGC	1 cut(s)	1710
PagI	TCATGA	1 cut(s)	1695
PaqCI	CACCTGC	1 cut(s)	1238
PasI	CCCWGGG	2 cut(s)	1508, 1870
PceI	AGGCCT	1 cut(s)	561
PcsI	WCGNNNNNNNCGW	1 cut(s)	2052
PfeI	GAWTC	4 cut(s)	934, 1263, 1321, 1745
PflMI	CCANNNNNTGG	1 cut(s)	1037
Ple19I	CGATCG	1 cut(s)	1006
PleI	GAGTC	3 cut(s)	1021, 1460, 1877
PmaCI	CACGTG	1 cut(s)	471
PmlI	CACGTG	1 cut(s)	471
PpsI	GAGTC	3 cut(s)	1021, 1460, 1877
Ppu21I	YACGTR	1 cut(s)	471
PshBI	ATTAAT	1 cut(s)	134
Psp6I	CCWGG	5 cut(s)	789, 971, 1477, 1507, 1869
PspCI	CACGTG	1 cut(s)	471
PspEI	GGTNACC	1 cut(s)	641
PspFI	CCCAGC	2 cut(s)	929, 1672
PspGI	CCWGG	5 cut(s)	789, 971, 1477, 1507, 1869
PspN4I	GGNNCC	5 cut(s)	548, 616, 943, 1342, 1670
PspPI	GGNCC	5 cut(s)	67, 117, 787, 1460, 2137
PsrI	GAACNNNNNNTAC	2 cut(s)	941, 973
PstI	CTGCAG	2 cut(s)	640, 1531
PstNI	CAGNNNCTG	2 cut(s)	767, 899
PsuI	RGATCY	2 cut(s)	850, 1276
PvuI	CGATCG	1 cut(s)	1006
PvuII	CAGCTG	3 cut(s)	235, 356, 899
RsaI	GTAC	4 cut(s)	182, 725, 760, 1867
RsaNI	GTAC	4 cut(s)	181, 724, 759, 1866
RseI	CAYNNNNRTG	3 cut(s)	62, 457, 1838
SalI	GTCGAC	1 cut(s)	1715
SaqAI	TTAA	7 cut(s)	95, 125, 134, 1043, 1386, 1646, 2142
Sau96I	GGNCC	5 cut(s)	67, 117, 787, 1460, 2137
SchI	GAGTC	3 cut(s)	1021, 1460, 1877
ScrFI	CCNGG	7 cut(s)	791, 973, 1479, 1509, 1817, 1818, 1871
SduI	GDGCHC	5 cut(s)	529, 549, 946, 970, 1673
SfaNI	GCATC	5 cut(s)	95, 121, 1081, 1401, 2053
SfcI	CTRYAG	3 cut(s)	636, 1335, 1527
SinI	GGWCC	4 cut(s)	67, 117, 787, 1460
SmaI	CCCGGG	1 cut(s)	1818
SmiMI	CAYNNNNRTG	3 cut(s)	62, 457, 1838
SmlI	CTYRAG	1 cut(s)	290
SmoI	CTYRAG	1 cut(s)	290
SpeI	ACTAGT	1 cut(s)	1822
SphI	GCATGC	1 cut(s)	1710
SseBI	AGGCCT	1 cut(s)	561
SsiI	CCGC	4 cut(s)	278, 844, 927, 1875
SspMI	CTAG	5 cut(s)	776, 1823, 1968, 1995, 2149
StuI	AGGCCT	1 cut(s)	561
StyD4I	CCNGG	7 cut(s)	789, 971, 1477, 1507, 1815, 1816, 1869
StyI	CCWWGG	2 cut(s)	783, 1344
TaaI	ACNGT	6 cut(s)	605, 985, 1048, 1714, 1987, 2060
TaiI	ACGT	6 cut(s)	378, 473, 532, 873, 1926, 2049
TaqI	TCGA	6 cut(s)	393, 1002, 1371, 1515, 1716, 2055
TaqII	GACCGA	1 cut(s)	105
TatI	WGTACW	3 cut(s)	180, 723, 758
TauI	GCSGC	2 cut(s)	929, 1878
TfiI	GAWTC	4 cut(s)	934, 1263, 1321, 1745
Tru1I	TTAA	7 cut(s)	95, 125, 134, 1043, 1386, 1646, 2142
Tru9I	TTAA	7 cut(s)	95, 125, 134, 1043, 1386, 1646, 2142
TscAI	CASTG	7 cut(s)	30, 217, 610, 886, 1021, 1536, 2065
TseFI	GTSAC	2 cut(s)	1576, 1915
Tsp45I	GTSAC	2 cut(s)	1576, 1915
TspDTI	ATGAA	4 cut(s)	1258, 1540, 1826, 1850
TspGWI	ACGGA	3 cut(s)	500, 819, 1289
TspMI	CCCGGG	1 cut(s)	1816
TspRI	CASTG	7 cut(s)	30, 217, 610, 886, 1021, 1536, 2065
Van91I	CCANNNNNTGG	1 cut(s)	1037
VpaK11BI	GGWCC	4 cut(s)	67, 117, 787, 1460
VspI	ATTAAT	1 cut(s)	134
XapI	RAATTY	3 cut(s)	402, 488, 1962
XceI	RCATGY	2 cut(s)	716, 1710
XcmI	CCANNNNNNNNNTGG	1 cut(s)	608
XmaI	CCCGGG	1 cut(s)	1816
XmiI	GTMKAC	1 cut(s)	1716
XspI	CTAG	5 cut(s)	776, 1823, 1968, 1995, 2149

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.