Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0002861

Physical Location & Seq

Genomic Coordinates Forward (+)

64191450 .. 64193726

Gene Structure 2277 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG476300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1878 bp

ATGAGTTTCTACAGTATGATCTCTCTGTTAGTGTTTACCATACTGCAAATCAACAATGCAGTTTCAAGTGCTGAGGAATCCCAGACATACATCATTCACATGGATCATTCCCACAAACCTACGTCTTTCGTCACCCACGAAGACTGGCACAGGTCTACCTTAACCTCGTTAATGTCATCTTCATCTCTGGCAGAACAAGAGAACGAGATGTTGTTGTACTCGTACAACCATGTCATGCACGGCTTCAGTGCCAGGCTCACAGCTTCTCAACTGTCCGAATTGGAGAAATCTCCGGCTCATGTTGCTACATACCCGGAGTCTTTTGGCAAGCTCTTCACAACACACAGCTCCAAGTTTCTAGGACTAAGACAGAACTCTGGCTTATTGCTTGCTTCCTCATCTGGCCAAGATGTGATCATAGGAATCATAGATACCGGAGTTTGGCCAGAGAGCGAGAGTTTTAGTGATAGAGGAATGTCTGAAGTGCCAAAAAGATGGAAAGGCACATGCGAGAATGGAACAGATTTTAGCCCATCTCTCTGCAACAACAAGCTCATTGGGGCTCGATCCTTTAGCAAAGGCCTGAAAGCAGCAGGAATTAAAATCTCCACAAAATATGACTTTGATTCACCACGGGACTGGTTTGGTCATGGAAGTCACACTTCGTCAACAGCTGCAGTTGAAGGAACATCATACTTCCCGGAGAGCGTTTACATTACTGATGCGCCATTGTACTACGGCAAAGACAATGCTAACAAAGCAATATGCAATATTGGGGCACTGGATCATAAAGAAGTGAAGGGAAAGGTGGTCATCTGTGAGAATACCACTGAGACTGATGTGGAAGGACAAAAGGAAGAGGTACAGAGGGCAGGTGGTTATGCTGGAATCTTCATGACAGATCTCTCATTTTTAGACCCAGAAGACTTCTCCATTCCTGCTATCATTGTTCCATTTGCTACAGGGGCCTTGATTAGAGAGTATGCAACACAGACCAATACAACTCGAGTTAAGACCCTGAGTTTTGTGCACACAAATTTGGGTACAAAACCATCACCGGAAGTAGCGTATTTCTCTTCAAGAGGACCAGACCCAGTCACTCCGGGTATCCTAAAACCAGACGTTCTTGCTCCAGGAGTCGACGTGCTGGCTGCATATATACCTAACAGGGGGTTCATGGAAGTACACAAGTATGATTTAGAGACAGATTATGCACTATTATCAGGGACATCAATGGCAGCACCCCATGTTGCCGGAGTGGCAGCTCTGCTGAAGGCTGTTCACCGAGAATGGAGTCCCGCAGCCATCCGATCGGCCATCATGACCACAGCATACTCGAGCGACAATTCTCAAACCACCATAAAAGACCAATGGTCTGGTCTTCCCGCCACGCCTTTAGATTTTGGTGCGGGCCACATCAACCCAAACAAAGCCATGAACCCTGGACTAATCTATGACATGGATGTGCAGGATTACATTGAGTTTCTATGTGGCCTTGGGTATAATGCCAAGCAAATGAAAGCTGTTATCAGACGAAGCCAGTGGTATTGCAGCTCAAAACCTGCCGAACTAAACTACCCTTCTTTCATGGCCATTTTTAACAGAACAGACTCTCCGAATGCCAAGAACTTCAGCAGGGTTGTGACAAACGTAGGGGATGATACATCAACCTACCGAGCATATTTAGAAGTTCCAAAAGGAATGAGGATTACAGTACAGCCTAGTACCCTAGTATTCACAGGTAAAAACCAAGAGCAAGGTTTCACTTTGAGCGTAGAGGTCGATAGCGATGCCCCGAATGTGATCTATGGTTATCTAGCATGGATTGACCAGTATAACCACATAGTATCAAGCCCTGTAGTAGCAATTAACTACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8

Protein Analysis

625

Amino Acids

68.62

Weight (kDa)

5.65

Isoelectric Point (pI)

43.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	29 - 108	5.8e-18	Peptidase inhibitor I9
Peptidase_S8	PF00082	135 - 450	1.6e-25	Subtilase family
fn3_6	PF17766	523 - 621	3.6e-25	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002861)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g34120 FvH4_2g34130 FvH4_2g34150 FvH4_2g34210 FvH4_2g34211 FvH4_2g34212
malus_domestica	MD05G1275700.v1.1 MD05G1275800.v1.1 MD08G1098000.v1.1 MD15G1080200.v1.1 MD15G1080300.v1.1
prunus_persica	Prupe.1G433100_v2.0.a1 Prupe.1G433200_v2.0.a1
pyrus_communis	pycom15g07460
rosa_chinensis	RchiOBHm_Chr6g0308201 RchiOBHm_Chr6g0308211 RchiOBHm_Chr6g0308221
rosa_laevigata	RLG00000010657 RLG00000010658 RLG00000010659
rosa_multiflora	Rmu_sc0005706.1_g000017 Rmu_sc0005706.1_g000018 Rmu_ssc0000355.1_g000001 Rmu_ssc0000355.1_g000006
rosa_roxburghii	Rroxscaffold_7G00160340 Rroxscaffold_7G00160360 Rroxscaffold_7G00160440 Rroxscaffold_7G00160450
rosa_rugosa	Rorug01G0005200 Rorug01G0066300 Rorug06G0364700 Rorug06G0364800 Rorug06G0364900
rosa_samantha	Rh6DG475900 Rh6DG476100 Rh6DG476300
rosa_wichuraiana	Rw6G041330 Rw6G041340 Rw6G041350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	863
Acc36I	ACCTGC	2 cut(s)	863, 1570
AccI	GTMKAC	2 cut(s)	155, 1140
AciI	CCGC	3 cut(s)	1299, 1386, 1409
AclWI	GGATC	3 cut(s)	111, 561, 792
AcoI	YGGCCR	4 cut(s)	403, 443, 1314, 1590
AcsI	RAATTY	1 cut(s)	1036
AcuI	CTGAAG	4 cut(s)	229, 501, 1292, 1615
AfaI	GTAC	8 cut(s)	218, 224, 734, 864, 1045, 1185, 1716, 1726
AfiI	CCNNNNNNNGG	2 cut(s)	441, 1169
AgsI	TTSAA	3 cut(s)	66, 683, 1080
AhdI	GACNNNNNGTC	1 cut(s)	1372
AjiI	CACGTC	1 cut(s)	1144
AjnI	CCWGG	3 cut(s)	251, 1132, 1441
AloI	GAACNNNNNNTCC	2 cut(s)	1597, 1629
AluBI	AGCT	8 cut(s)	263, 331, 348, 553, 674, 1265, 1523, 1554
AluI	AGCT	8 cut(s)	263, 331, 348, 553, 674, 1265, 1523, 1554
Alw21I	GWGCWC	1 cut(s)	1032
Alw26I	GTCTC	2 cut(s)	827, 1196
Alw44I	GTGCAC	1 cut(s)	1028
AlwI	GGATC	3 cut(s)	111, 561, 792
Ama87I	CYCGRG	2 cut(s)	1005, 1336
AoxI	GGCC	8 cut(s)	403, 443, 580, 966, 1314, 1411, 1492, 1590
ApaLI	GTGCAC	1 cut(s)	1028
ApeKI	GCWGC	7 cut(s)	590, 674, 1151, 1238, 1262, 1301, 1551
ApoI	RAATTY	1 cut(s)	1036
AspLEI	GCGC	1 cut(s)	727
AspS9I	GGNCC	3 cut(s)	966, 1085, 1411
AsuC2I	CCSGG	3 cut(s)	314, 701, 1104
AsuHPI	GGTGA	4 cut(s)	124, 621, 1047, 1274
AvaI	CYCGRG	2 cut(s)	1005, 1336
AvaII	GGWCC	1 cut(s)	1085
BaeGI	GKGCMC	2 cut(s)	781, 1032
BaeI	ACNNNNGTAYC	2 cut(s)	423, 456
BalI	TGGCCA	3 cut(s)	405, 445, 1592
BanII	GRGCYC	1 cut(s)	565
BbsI	GAAGAC	3 cut(s)	147, 930, 1373
Bbv12I	GWGCWC	1 cut(s)	1032
BbvCI	CCTCAGC	1 cut(s)	72
BbvI	GCAGC	7 cut(s)	602, 661, 1138, 1250, 1274, 1313, 1563
BccI	CCATC	5 cut(s)	489, 541, 1060, 1313, 1325
BceAI	ACGGC	2 cut(s)	256, 754
BcgI	CGANNNNNNTGC	2 cut(s)	1772, 1806
BciT130I	CCWGG	3 cut(s)	253, 1134, 1443
BciVI	GTATCC	1 cut(s)	1118
BclI	TGATCA	1 cut(s)	414
BcnI	CCSGG	3 cut(s)	314, 701, 1104
BcoDI	GTCTC	2 cut(s)	827, 1196
BfaI	CTAG	5 cut(s)	359, 1722, 1730, 1817, 1876
BfmI	CTRYAG	4 cut(s)	10, 675, 960, 1857
BfuAI	ACCTGC	2 cut(s)	863, 1570
BfuI	GTATCC	1 cut(s)	1118
BglI	GCCNNNNNGGC	1 cut(s)	1259
BglII	AGATCT	1 cut(s)	901
BisI	GCNGC	7 cut(s)	591, 675, 1152, 1239, 1263, 1302, 1552
BlsI	GCNGC	7 cut(s)	592, 676, 1153, 1240, 1264, 1303, 1553
Bme1390I	CCNGG	6 cut(s)	253, 314, 701, 1104, 1134, 1443
Bme18I	GGWCC	1 cut(s)	1085
BmeRI	GACNNNNNGTC	1 cut(s)	1372
BmeT110I	CYCGRG	2 cut(s)	1005, 1336
BmgBI	CACGTC	1 cut(s)	1144
BmgT120I	GGNCC	3 cut(s)	966, 1085, 1411
BmiI	GGNNCC	1 cut(s)	967
BmrFI	CCNGG	6 cut(s)	253, 314, 701, 1104, 1134, 1443
BmrI	ACTGGG	1 cut(s)	1088
BmsI	GCATC	2 cut(s)	712, 1780
BmuI	ACTGGG	1 cut(s)	1088
BpiI	GAAGAC	3 cut(s)	147, 930, 1373
BpmI	CTGGAG	1 cut(s)	1116
Bpu10I	CCTNAGC	1 cut(s)	72
BpuMI	CCSGG	3 cut(s)	314, 701, 1104
BsaJI	CCNNGG	3 cut(s)	632, 1441, 1495
BsaWI	WCCGGW	2 cut(s)	434, 1057
BsaXI	ACNNNNNCTCC	4 cut(s)	1128, 1158, 1597, 1627
Bsc4I	CCNNNNNNNGG	2 cut(s)	441, 1169
Bse1I	ACTGG	6 cut(s)	149, 644, 786, 1094, 1540, 1831
BseBI	CCWGG	3 cut(s)	253, 1134, 1443
BseDI	CCNNGG	3 cut(s)	632, 1441, 1495
BseGI	GGATG	3 cut(s)	1305, 1468, 1663
BseLI	CCNNNNNNNGG	2 cut(s)	441, 1169
BseMII	CTCAG	3 cut(s)	63, 822, 1010
BseNI	ACTGG	6 cut(s)	149, 644, 786, 1094, 1540, 1831
BseSI	GKGCMC	2 cut(s)	781, 1032
BseXI	GCAGC	7 cut(s)	602, 661, 1138, 1250, 1274, 1313, 1563
BsgI	GTGCAG	1 cut(s)	1487
Bsh1285I	CGRYCG	1 cut(s)	1313
BshFI	GGCC	8 cut(s)	405, 445, 582, 968, 1316, 1413, 1494, 1592
BsiEI	CGRYCG	1 cut(s)	1313
BsiHKAI	GWGCWC	1 cut(s)	1032
BsiHKCI	CYCGRG	2 cut(s)	1005, 1336
BsiSI	CCGG	7 cut(s)	293, 314, 435, 701, 1058, 1103, 1254
BslFI	GGGAC	3 cut(s)	650, 1240, 1281
BslI	CCNNNNNNNGG	2 cut(s)	441, 1169
BsmAI	GTCTC	2 cut(s)	827, 1196
BsmFI	GGGAC	3 cut(s)	650, 1240, 1281
BsmI	GAATGC	1 cut(s)	1624
BsnI	GGCC	8 cut(s)	405, 445, 582, 968, 1316, 1413, 1494, 1592
BsoBI	CYCGRG	2 cut(s)	1005, 1336
Bsp1286I	GDGCHC	3 cut(s)	565, 781, 1032
Bsp143I	GATC	8 cut(s)	18, 103, 414, 566, 784, 901, 1310, 1803
BspACI	CCGC	3 cut(s)	1299, 1386, 1409
BspANI	GGCC	8 cut(s)	405, 445, 582, 968, 1316, 1413, 1494, 1592
BspCNI	CTCAG	3 cut(s)	64, 823, 1011
BspHI	TCATGA	2 cut(s)	894, 1320
BspLI	GGNNCC	1 cut(s)	967
BspMAI	CTGCAG	1 cut(s)	679
BspMI	ACCTGC	2 cut(s)	863, 1570
BspPI	GGATC	3 cut(s)	111, 561, 792
BspQI	GCTCTTC	1 cut(s)	338
BsrI	ACTGG	6 cut(s)	149, 644, 786, 1094, 1540, 1831
BssECI	CCNNGG	3 cut(s)	632, 1441, 1495
BssMI	GATC	8 cut(s)	18, 103, 414, 566, 784, 901, 1310, 1803
BssT1I	CCWWGG	1 cut(s)	1495
Bst2UI	CCWGG	3 cut(s)	253, 1134, 1443
Bst4CI	ACNGT	3 cut(s)	14, 273, 1714
Bst6I	CTCTTC	3 cut(s)	338, 852, 1081
BstC8I	GCNNGC	4 cut(s)	329, 390, 1149, 1411
BstDEI	CTNAG	4 cut(s)	72, 365, 831, 1019
BstDSI	CCRYGG	1 cut(s)	632
BstF5I	GGATG	3 cut(s)	1305, 1468, 1663
BstHHI	GCGC	1 cut(s)	727
BstKTI	GATC	8 cut(s)	21, 106, 417, 569, 787, 904, 1313, 1806
BstMAI	GTCTC	2 cut(s)	827, 1196
BstMBI	GATC	8 cut(s)	18, 103, 414, 566, 784, 901, 1310, 1803
BstMCI	CGRYCG	1 cut(s)	1313
BstMWI	GCNNNNNNNGC	4 cut(s)	302, 758, 965, 1259
BstNI	CCWGG	3 cut(s)	253, 1134, 1443
BstNSI	RCATGY	1 cut(s)	510
BstSCI	CCNGG	6 cut(s)	251, 312, 699, 1102, 1132, 1441
BstSFI	CTRYAG	4 cut(s)	10, 675, 960, 1857
BstSLI	GKGCMC	2 cut(s)	781, 1032
BstV1I	GCAGC	7 cut(s)	602, 661, 1138, 1250, 1274, 1313, 1563
BstV2I	GAAGAC	3 cut(s)	147, 930, 1373
BstX2I	RGATCY	1 cut(s)	901
BstXI	CCANNNNNNTGG	3 cut(s)	495, 639, 1376
BstYI	RGATCY	1 cut(s)	901
BsuI	GTATCC	1 cut(s)	1118
BsuRI	GGCC	8 cut(s)	405, 445, 582, 968, 1316, 1413, 1494, 1592
BtgI	CCRYGG	1 cut(s)	632
BtgZI	GCGATG	1 cut(s)	1803
BtrI	CACGTC	1 cut(s)	1144
BtsCI	GGATG	3 cut(s)	1305, 1468, 1663
BtsIMutI	CAGTG	4 cut(s)	253, 779, 828, 1547
BveI	ACCTGC	2 cut(s)	863, 1570
Cac8I	GCNNGC	4 cut(s)	329, 390, 1149, 1411
CciI	TCATGA	2 cut(s)	894, 1320
CfoI	GCGC	1 cut(s)	727
Cfr13I	GGNCC	3 cut(s)	966, 1085, 1411
Csp6I	GTAC	8 cut(s)	217, 223, 733, 863, 1044, 1184, 1715, 1725
CviQI	GTAC	8 cut(s)	217, 223, 733, 863, 1044, 1184, 1715, 1725
DdeI	CTNAG	4 cut(s)	72, 365, 831, 1019
DpnI	GATC	8 cut(s)	20, 105, 416, 568, 786, 903, 1312, 1805
DpnII	GATC	8 cut(s)	18, 103, 414, 566, 784, 901, 1310, 1803
DriI	GACNNNNNGTC	1 cut(s)	1372
EaeI	YGGCCR	4 cut(s)	403, 443, 1314, 1590
Eam1104I	CTCTTC	3 cut(s)	338, 852, 1081
Eam1105I	GACNNNNNGTC	1 cut(s)	1372
EarI	CTCTTC	3 cut(s)	338, 852, 1081
Eco130I	CCWWGG	1 cut(s)	1495
Eco147I	AGGCCT	1 cut(s)	582
Eco24I	GRGCYC	1 cut(s)	565
Eco47I	GGWCC	1 cut(s)	1085
Eco57I	CTGAAG	4 cut(s)	229, 501, 1292, 1615
Eco88I	CYCGRG	2 cut(s)	1005, 1336
EcoO109I	RGGNCCY	1 cut(s)	966
EcoRII	CCWGG	3 cut(s)	251, 1132, 1441
EcoT14I	CCWWGG	1 cut(s)	1495
EcoT38I	GRGCYC	1 cut(s)	565
ErhI	CCWWGG	1 cut(s)	1495
FalI	AAGNNNNNCTT	2 cut(s)	646, 678
FaqI	GGGAC	3 cut(s)	650, 1240, 1281
FauI	CCCGC	3 cut(s)	1306, 1393, 1402
FbaI	TGATCA	1 cut(s)	414
FblI	GTMKAC	2 cut(s)	155, 1140
Fnu4HI	GCNGC	7 cut(s)	591, 675, 1152, 1239, 1263, 1302, 1552
FokI	GGATG	3 cut(s)	1292, 1475, 1670
FriOI	GRGCYC	1 cut(s)	565
Fsp4HI	GCNGC	7 cut(s)	591, 675, 1152, 1239, 1263, 1302, 1552
FspBI	CTAG	5 cut(s)	359, 1722, 1730, 1817, 1876
GlaI	GCGC	1 cut(s)	726
GluI	GCNGC	7 cut(s)	591, 675, 1152, 1239, 1263, 1302, 1552
GsuI	CTGGAG	1 cut(s)	1116
HaeIII	GGCC	8 cut(s)	405, 445, 582, 968, 1316, 1413, 1494, 1592
HapII	CCGG	7 cut(s)	293, 314, 435, 701, 1058, 1103, 1254
HhaI	GCGC	1 cut(s)	727
Hin6I	GCGC	1 cut(s)	725
HinP1I	GCGC	1 cut(s)	725
HincII	GTYRAC	2 cut(s)	669, 1141
HindII	GTYRAC	2 cut(s)	669, 1141
HinfI	GANTC	8 cut(s)	77, 317, 423, 626, 888, 1137, 1294, 1610
HpaII	CCGG	7 cut(s)	293, 314, 435, 701, 1058, 1103, 1254
HphI	GGTGA	4 cut(s)	124, 621, 1047, 1274
Hpy166II	GTNNAC	8 cut(s)	36, 156, 669, 712, 1030, 1141, 1186, 1282
Hpy188I	TCNGA	5 cut(s)	277, 481, 1310, 1532, 1617
Hpy188III	TCNNGA	3 cut(s)	895, 1080, 1321
Hpy8I	GTNNAC	8 cut(s)	36, 156, 669, 712, 1030, 1141, 1186, 1282
Hpy99I	CGWCG	1 cut(s)	1145
HpyAV	CCTTC	5 cut(s)	677, 793, 839, 1267, 1590
HpyCH4III	ACNGT	3 cut(s)	14, 273, 1714
HpyCH4IV	ACGT	4 cut(s)	122, 1122, 1143, 1650
HpyF10VI	GCNNNNNNNGC	4 cut(s)	302, 758, 965, 1259
HpyF3I	CTNAG	4 cut(s)	72, 365, 831, 1019
HpySE526I	ACGT	4 cut(s)	122, 1122, 1143, 1650
HspAI	GCGC	1 cut(s)	725
Ksp22I	TGATCA	1 cut(s)	414
Kzo9I	GATC	8 cut(s)	18, 103, 414, 566, 784, 901, 1310, 1803
LguI	GCTCTTC	1 cut(s)	338
LmnI	GCTCC	2 cut(s)	353, 1135
Lsp1109I	GCAGC	7 cut(s)	602, 661, 1138, 1250, 1274, 1313, 1563
LweI	GCATC	2 cut(s)	712, 1780
MaeI	CTAG	5 cut(s)	359, 1722, 1730, 1817, 1876
MaeII	ACGT	4 cut(s)	122, 1122, 1143, 1650
MaeIII	GTNAC	4 cut(s)	130, 656, 1096, 1642
MalI	GATC	8 cut(s)	20, 105, 416, 568, 786, 903, 1312, 1805
MboI	GATC	8 cut(s)	18, 103, 414, 566, 784, 901, 1310, 1803
MboII	GAAGA	8 cut(s)	152, 171, 325, 869, 883, 935, 1068, 1373
MflI	RGATCY	1 cut(s)	901
MhlI	GDGCHC	3 cut(s)	565, 781, 1032
MlsI	TGGCCA	3 cut(s)	405, 445, 1592
MluCI	AATT	5 cut(s)	278, 597, 1036, 1345, 1866
MluNI	TGGCCA	3 cut(s)	405, 445, 1592
MlyI	GAGTC	4 cut(s)	326, 1146, 1303, 1604
MnlI	CCTC	9 cut(s)	67, 175, 406, 464, 853, 861, 1076, 1698, 1771
Mox20I	TGGCCA	3 cut(s)	405, 445, 1592
MscI	TGGCCA	3 cut(s)	405, 445, 1592
MseI	TTAA	6 cut(s)	161, 170, 600, 1011, 1599, 1869
MslI	CAYNNNNRTG	3 cut(s)	98, 1191, 1463
Msp20I	TGGCCA	3 cut(s)	405, 445, 1592
MspA1I	CMGCKG	1 cut(s)	674
MspI	CCGG	7 cut(s)	293, 314, 435, 701, 1058, 1103, 1254
MspR9I	CCNGG	6 cut(s)	253, 314, 701, 1104, 1134, 1443
Mva1269I	GAATGC	1 cut(s)	1624
MvaI	CCWGG	3 cut(s)	253, 1134, 1443
MwoI	GCNNNNNNNGC	4 cut(s)	302, 758, 965, 1259
NciI	CCSGG	3 cut(s)	314, 701, 1104
NdeII	GATC	8 cut(s)	18, 103, 414, 566, 784, 901, 1310, 1803
NlaIV	GGNNCC	1 cut(s)	967
NmuCI	GTSAC	4 cut(s)	130, 656, 1096, 1642
NspI	RCATGY	1 cut(s)	510
PaeR7I	CTCGAG	2 cut(s)	1005, 1336
PagI	TCATGA	2 cut(s)	894, 1320
PaqCI	CACCTGC	1 cut(s)	863
PceI	AGGCCT	1 cut(s)	582
PciSI	GCTCTTC	1 cut(s)	338
PcsI	WCGNNNNNNNCGW	1 cut(s)	135
PctI	GAATGC	1 cut(s)	1624
PfeI	GAWTC	4 cut(s)	77, 423, 626, 888
PflFI	GACNNNGTC	1 cut(s)	1094
PfoI	TCCNGGA	2 cut(s)	699, 1132
PkrI	GCNGC	7 cut(s)	592, 676, 1153, 1240, 1264, 1303, 1553
Ple19I	CGATCG	1 cut(s)	1313
PleI	GAGTC	4 cut(s)	325, 1145, 1302, 1604
PpsI	GAGTC	4 cut(s)	325, 1145, 1302, 1604
Psp6I	CCWGG	3 cut(s)	251, 1132, 1441
PspGI	CCWGG	3 cut(s)	251, 1132, 1441
PspN4I	GGNNCC	1 cut(s)	967
PspPI	GGNCC	3 cut(s)	966, 1085, 1411
PspXI	VCTCGAGB	2 cut(s)	1005, 1336
PstI	CTGCAG	1 cut(s)	679
PsuI	RGATCY	1 cut(s)	901
PsyI	GACNNNGTC	1 cut(s)	1094
PvuI	CGATCG	1 cut(s)	1313
PvuII	CAGCTG	1 cut(s)	674
RsaI	GTAC	8 cut(s)	218, 224, 734, 864, 1045, 1185, 1716, 1726
RsaNI	GTAC	8 cut(s)	217, 223, 733, 863, 1044, 1184, 1715, 1725
RseI	CAYNNNNRTG	3 cut(s)	98, 1191, 1463
SalI	GTCGAC	1 cut(s)	1139
SapI	GCTCTTC	1 cut(s)	338
SaqAI	TTAA	6 cut(s)	161, 170, 600, 1011, 1599, 1869
SatI	GCNGC	7 cut(s)	591, 675, 1152, 1239, 1263, 1302, 1552
Sau3AI	GATC	8 cut(s)	18, 103, 414, 566, 784, 901, 1310, 1803
Sau96I	GGNCC	3 cut(s)	966, 1085, 1411
SchI	GAGTC	4 cut(s)	326, 1146, 1303, 1604
ScrFI	CCNGG	6 cut(s)	253, 314, 701, 1104, 1134, 1443
SduI	GDGCHC	3 cut(s)	565, 781, 1032
SfaNI	GCATC	2 cut(s)	712, 1780
SfcI	CTRYAG	4 cut(s)	10, 675, 960, 1857
Sfr274I	CTCGAG	2 cut(s)	1005, 1336
SinI	GGWCC	1 cut(s)	1085
SlaI	CTCGAG	2 cut(s)	1005, 1336
SmiMI	CAYNNNNRTG	3 cut(s)	98, 1191, 1463
SmlI	CTYRAG	2 cut(s)	1005, 1336
SmoI	CTYRAG	2 cut(s)	1005, 1336
Sse9I	AATT	5 cut(s)	278, 597, 1036, 1345, 1866
SseBI	AGGCCT	1 cut(s)	582
SsiI	CCGC	3 cut(s)	1299, 1386, 1409
SspI	AATATT	1 cut(s)	772
SspMI	CTAG	5 cut(s)	359, 1722, 1730, 1817, 1876
StuI	AGGCCT	1 cut(s)	582
StyD4I	CCNGG	6 cut(s)	251, 312, 699, 1102, 1132, 1441
StyI	CCWWGG	1 cut(s)	1495
TaaI	ACNGT	3 cut(s)	14, 273, 1714
TaiI	ACGT	4 cut(s)	125, 1125, 1146, 1653
TaqI	TCGA	5 cut(s)	565, 1006, 1140, 1337, 1782
TasI	AATT	5 cut(s)	278, 597, 1036, 1345, 1866
TatI	WGTACW	4 cut(s)	216, 732, 1183, 1714
TfiI	GAWTC	4 cut(s)	77, 423, 626, 888
Tru1I	TTAA	6 cut(s)	161, 170, 600, 1011, 1599, 1869
Tru9I	TTAA	6 cut(s)	161, 170, 600, 1011, 1599, 1869
TscAI	CASTG	4 cut(s)	253, 786, 835, 1547
TseFI	GTSAC	4 cut(s)	130, 656, 1096, 1642
TseI	GCWGC	7 cut(s)	590, 674, 1151, 1238, 1262, 1301, 1551
Tsp45I	GTSAC	4 cut(s)	130, 656, 1096, 1642
TspDTI	ATGAA	6 cut(s)	171, 883, 1165, 1451, 1532, 1576
TspRI	CASTG	4 cut(s)	253, 786, 835, 1547
Tth111I	GACNNNGTC	1 cut(s)	1094
VneI	GTGCAC	1 cut(s)	1028
VpaK11BI	GGWCC	1 cut(s)	1085
XapI	RAATTY	1 cut(s)	1036
XceI	RCATGY	1 cut(s)	510
XhoI	CTCGAG	2 cut(s)	1005, 1336
XmiI	GTMKAC	2 cut(s)	155, 1140
XspI	CTAG	5 cut(s)	359, 1722, 1730, 1817, 1876

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.