Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005706.1

Orthogroup ID

OG0002861

Physical Location & Seq

Genomic Coordinates Forward (+)

81820 .. 83871

Gene Structure 2052 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005706.1_g000018.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2052 bp

atgcacggtttcagtgccaggcttacagcttctcaactgtccgaattagaggaatctccggctcatgttgccacgtatccggagtcttttggtaagctcttgacaacacacagctccaagtttctaggactgagacggaactcaggcttattgcttgcttcctcgtctggccaagatgtgatcataggaatcatagataccggagtttggccagagagcgagagtttcgatgataggggaatgtctgaagtgccaaaaagatggaaaggcacttgcgagaatggaacatatttcaccccatctctctgcaacaacaagctcattggggctcgatcctttagcaaaggcctgaaagcagcaggaattaaaatctccacaaaaaatgacttcgattcaccacgggactggtttggtcatggaagtcacacttcgtcaacaactgcaggtaaccatgtacgcggcgcaagccatttcggatatgcaaaaggcacggcaagaggggtggcgccacgagcccatgttgccatatacaaggtcgcctgggcaacagactcggaaaagagtttcgctagtgatgtgcttgcaggcatggaccaagcaatttctgatggtgttgatataatgtcactgtctcttgcctttgacttccttccttatttcaacgatgtcattgccattgcttctctttctgtaatcgaacaaggaattgttgtggtctgtgctgctggaaatgacgggaaatacagtacaacatacaatggagcaccctggatcacaacagtaggagccggaactcttgatcccaccttcactgcaacactgactctagataatggtttgacggttgaagcaacatcgtacttccccgagagcgtttacattactgatgtgccattgtactacgacaaagacaatgcaacgaaagcaatatgcaatactgggtcactggatcacaacgaagtggcaggaaaggtagtcctttgtgataatgccactgagactcccgtcaatggagtcgacttccaaaagaaggaggtggagagggcaggtggttatgctggaatcttcatggcagatctctcacttttagagccggaagacttctccattcctgctatcattgttccatttgctacaggggccttgattagagagtatgcaacgcaggtccatacacctagagttaagatcctgagttttgtgcacacaaatttgggtacaaaaccatcaccggaagtagcgtatttctcttcaaggggaccagacccaatcactcctggtattttaaaaccagacattcttgctccaggagtcgatgtgcttgctgcagttacacctaacaacccatgcatggaagtaaacaattataatctagtgacagattatgaactatattcaggaacatcaatggcggcaccccatgccgctggtgtggcagctctgctaaaggctgttcaccgaaaatggagtccagcagccatccgatcggtcatcatgaccatagcatactcaacaaccaattctcacaccagcatacaacaccaatggtccggtcttccagccacacctttagattttggtgcaggccacatcaacccgaataaggccatgaaccccggactagtctatgacatgaatgtgcaagactacattgattttctttgtacccttgggtataatgacaagcagatgaaagatgttattagacgaagccagtggacttgcagacagccccctaccgaactaaactacccctcattcgtggccatcttcaacaaaacagactcttcaaaagccaaaaactttagcagggtcgtgacaaacgtgggggatgatacctccatctaccgagcatttctagaagttcctagaggaatgaggattaaagtagagcctaattcttttacattcaccggaaaatatcagcagcaagggtttgttttgaatgtagagatcgatagcgatgctcctaaggtgatctatggttatctcagatgggttgatcaccatgatcacatggtatcaagccctgtagtggccattaataactag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8

Protein Analysis

683

Amino Acids

74.08

Weight (kDa)

5.88

Isoelectric Point (pI)

33.61

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002861)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g34120 FvH4_2g34130 FvH4_2g34150 FvH4_2g34210 FvH4_2g34211 FvH4_2g34212
malus_domestica	MD05G1275700.v1.1 MD05G1275800.v1.1 MD08G1098000.v1.1 MD15G1080200.v1.1 MD15G1080300.v1.1
prunus_persica	Prupe.1G433100_v2.0.a1 Prupe.1G433200_v2.0.a1
pyrus_communis	pycom15g07460
rosa_chinensis	RchiOBHm_Chr6g0308201 RchiOBHm_Chr6g0308211 RchiOBHm_Chr6g0308221
rosa_laevigata	RLG00000010657 RLG00000010658 RLG00000010659
rosa_multiflora	Rmu_sc0005706.1_g000017 Rmu_sc0005706.1_g000018 Rmu_ssc0000355.1_g000001 Rmu_ssc0000355.1_g000006
rosa_roxburghii	Rroxscaffold_7G00160340 Rroxscaffold_7G00160360 Rroxscaffold_7G00160440 Rroxscaffold_7G00160450
rosa_rugosa	Rorug01G0005200 Rorug01G0066300 Rorug06G0364700 Rorug06G0364800 Rorug06G0364900
rosa_samantha	Rh6DG475900 Rh6DG476100 Rh6DG476300
rosa_wichuraiana	Rw6G041330 Rw6G041340 Rw6G041350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1368
AarI	CACCTGC	1 cut(s)	1037
Acc36I	ACCTGC	3 cut(s)	434, 1037, 1156
AccB1I	GGYRCC	2 cut(s)	505, 1414
AccI	GTMKAC	1 cut(s)	1017
AccII	CGCG	1 cut(s)	459
AccIII	TCCGGA	1 cut(s)	79
AciI	CCGC	3 cut(s)	459, 1412, 1425
AclWI	GGATC	5 cut(s)	327, 779, 794, 957, 1183
AcoI	YGGCCR	4 cut(s)	169, 209, 1764, 2037
AcsI	RAATTY	1 cut(s)	1210
AcuI	CTGAAG	1 cut(s)	267
AcyI	GRCGYC	1 cut(s)	506
AfaI	GTAC	6 cut(s)	456, 748, 860, 899, 1219, 1666
AfiI	CCNNNNNNNGG	6 cut(s)	207, 1010, 1030, 1351, 1603, 2035
AgsI	TTSAA	6 cut(s)	661, 848, 1254, 1774, 1791, 1945
AhlI	ACTAGT	1 cut(s)	1621
AjnI	CCWGG	5 cut(s)	17, 539, 767, 1276, 1306
AloI	GAACNNNNNNTCC	2 cut(s)	784, 816
AluBI	AGCT	5 cut(s)	29, 97, 114, 319, 1439
AluI	AGCT	5 cut(s)	29, 97, 114, 319, 1439
Alw21I	GWGCWC	2 cut(s)	766, 1206
Alw26I	GTCTC	3 cut(s)	127, 636, 992
Alw44I	GTGCAC	1 cut(s)	1202
AlwI	GGATC	5 cut(s)	327, 779, 794, 957, 1183
Ama87I	CYCGRG	1 cut(s)	866
Aor13HI	TCCGGA	1 cut(s)	79
AoxI	GGCC	8 cut(s)	169, 209, 346, 1140, 1585, 1605, 1764, 2037
ApaLI	GTGCAC	1 cut(s)	1202
ApeKI	GCWGC	6 cut(s)	356, 722, 1325, 1436, 1475, 1927
ApoI	RAATTY	1 cut(s)	1210
ArsI	GACNNNNNNTTYG	2 cut(s)	1453, 1485
AseI	ATTAAT	1 cut(s)	2043
AspLEI	GCGC	2 cut(s)	464, 508
AspS9I	GGNCC	5 cut(s)	592, 1140, 1168, 1259, 1548
AsuC2I	CCSGG	1 cut(s)	1617
AsuHPI	GGTGA	7 cut(s)	286, 387, 1221, 1448, 1903, 1987, 1997
AvaI	CYCGRG	1 cut(s)	866
AvaII	GGWCC	4 cut(s)	592, 1168, 1259, 1548
AxyI	CCTNAGG	1 cut(s)	1971
BaeGI	GKGCMC	1 cut(s)	1206
BaeI	ACNNNNGTAYC	2 cut(s)	189, 222
BalI	TGGCCA	4 cut(s)	171, 211, 1766, 2039
BanI	GGYRCC	2 cut(s)	505, 1414
BanII	GRGCYC	2 cut(s)	331, 517
BauI	CACGAG	1 cut(s)	510
BbsI	GAAGAC	2 cut(s)	1104, 1547
Bbv12I	GWGCWC	2 cut(s)	766, 1206
BbvI	GCAGC	6 cut(s)	368, 709, 1312, 1448, 1487, 1939
BccI	CCATC	8 cut(s)	255, 307, 602, 1234, 1487, 1775, 1850, 1989
BceAI	ACGGC	1 cut(s)	507
BcgI	CGANNNNNNTGC	8 cut(s)	534, 568, 653, 687, 1304, 1338, 1946, 1980
BciT130I	CCWGG	5 cut(s)	19, 541, 769, 1278, 1308
BciVI	GTATCC	1 cut(s)	87
BclI	TGATCA	3 cut(s)	180, 2002, 2011
BcnI	CCSGG	1 cut(s)	1617
BcoDI	GTCTC	3 cut(s)	127, 636, 992
BcuI	ACTAGT	1 cut(s)	1621
BfaI	CTAG	9 cut(s)	125, 570, 827, 1179, 1373, 1622, 1859, 1869, 2050
BfmI	CTRYAG	4 cut(s)	441, 1134, 1326, 2031
BfoI	RGCGCY	1 cut(s)	509
BfuAI	ACCTGC	3 cut(s)	434, 1037, 1156
BfuI	GTATCC	1 cut(s)	87
BglII	AGATCT	1 cut(s)	1075
BisI	GCNGC	9 cut(s)	357, 460, 723, 1326, 1413, 1425, 1437, 1476, 1928
BlsI	GCNGC	9 cut(s)	358, 461, 724, 1327, 1414, 1426, 1438, 1477, 1929
Bme1390I	CCNGG	6 cut(s)	19, 541, 769, 1278, 1308, 1617
Bme18I	GGWCC	4 cut(s)	592, 1168, 1259, 1548
BmeT110I	CYCGRG	1 cut(s)	866
BmgT120I	GGNCC	5 cut(s)	592, 1140, 1168, 1259, 1548
BmiI	GGNNCC	5 cut(s)	507, 787, 1141, 1260, 1416
BmrFI	CCNGG	6 cut(s)	19, 541, 769, 1278, 1308, 1617
BmrI	ACTGGG	1 cut(s)	948
BmsI	GCATC	1 cut(s)	1954
BmuI	ACTGGG	1 cut(s)	948
BoxI	GACNNNNGTC	1 cut(s)	1004
BpiI	GAAGAC	2 cut(s)	1104, 1547
BpmI	CTGGAG	1 cut(s)	1290
BpuMI	CCSGG	1 cut(s)	1617
Bsa29I	ATCGAT	1 cut(s)	1956
BsaAI	YACGTR	1 cut(s)	75
BsaHI	GRCGYC	1 cut(s)	506
BsaJI	CCNNGG	5 cut(s)	398, 540, 767, 1615, 1669
BsaWI	WCCGGW	5 cut(s)	79, 200, 1231, 1550, 1913
BsaXI	ACNNNNNCTCC	4 cut(s)	985, 1015, 1302, 1332
Bsc4I	CCNNNNNNNGG	6 cut(s)	207, 1010, 1030, 1351, 1603, 2035
Bse1I	ACTGG	4 cut(s)	410, 943, 951, 1714
Bse21I	CCTNAGG	1 cut(s)	1971
Bse3DI	GCAATG	2 cut(s)	669, 675
BseAI	TCCGGA	1 cut(s)	79
BseBI	CCWGG	5 cut(s)	19, 541, 769, 1278, 1308
BseCI	ATCGAT	1 cut(s)	1956
BseDI	CCNNGG	5 cut(s)	398, 540, 767, 1615, 1669
BseGI	GGATG	2 cut(s)	1479, 1837
BseLI	CCNNNNNNNGG	6 cut(s)	207, 1010, 1030, 1351, 1603, 2035
BseMI	GCAATG	2 cut(s)	669, 675
BseMII	CTCAG	5 cut(s)	122, 156, 987, 1184, 2005
BseNI	ACTGG	4 cut(s)	410, 943, 951, 1714
BseSI	GKGCMC	1 cut(s)	1206
BseXI	GCAGC	6 cut(s)	368, 709, 1312, 1448, 1487, 1939
BsgI	GTGCAG	1 cut(s)	1602
Bsh1236I	CGCG	1 cut(s)	459
Bsh1285I	CGRYCG	1 cut(s)	1487
BshFI	GGCC	8 cut(s)	171, 211, 348, 1142, 1587, 1607, 1766, 2039
BshNI	GGYRCC	2 cut(s)	505, 1414
BshVI	ATCGAT	1 cut(s)	1956
BsiEI	CGRYCG	1 cut(s)	1487
BsiHKAI	GWGCWC	2 cut(s)	766, 1206
BsiHKCI	CYCGRG	1 cut(s)	866
BsiSI	CCGG	9 cut(s)	59, 80, 201, 789, 1094, 1232, 1551, 1617, 1914
BslFI	GGGAC	2 cut(s)	416, 1272
BslI	CCNNNNNNNGG	6 cut(s)	207, 1010, 1030, 1351, 1603, 2035
BsmAI	GTCTC	3 cut(s)	127, 636, 992
BsmBI	CGTCTC	1 cut(s)	127
BsmFI	GGGAC	2 cut(s)	416, 1272
BsnI	GGCC	8 cut(s)	171, 211, 348, 1142, 1587, 1607, 1766, 2039
BsoBI	CYCGRG	1 cut(s)	866
Bsp1286I	GDGCHC	4 cut(s)	331, 517, 766, 1206
Bsp13I	TCCGGA	1 cut(s)	79
BspACI	CCGC	3 cut(s)	459, 1412, 1425
BspANI	GGCC	8 cut(s)	171, 211, 348, 1142, 1587, 1607, 1766, 2039
BspCNI	CTCAG	5 cut(s)	123, 155, 988, 1185, 2004
BspDI	ATCGAT	1 cut(s)	1956
BspEI	TCCGGA	1 cut(s)	79
BspFNI	CGCG	1 cut(s)	459
BspHI	TCATGA	1 cut(s)	1494
BspLI	GGNNCC	5 cut(s)	507, 787, 1141, 1260, 1416
BspMAI	CTGCAG	2 cut(s)	445, 1330
BspMI	ACCTGC	3 cut(s)	434, 1037, 1156
BspPI	GGATC	5 cut(s)	327, 779, 794, 957, 1183
BspT107I	GGYRCC	2 cut(s)	505, 1414
BsrDI	GCAATG	2 cut(s)	669, 675
BsrI	ACTGG	4 cut(s)	410, 943, 951, 1714
BssECI	CCNNGG	5 cut(s)	398, 540, 767, 1615, 1669
BssNI	GRCGYC	1 cut(s)	506
BssSI	CACGAG	1 cut(s)	510
BssT1I	CCWWGG	1 cut(s)	1669
Bst2BI	CACGAG	1 cut(s)	510
Bst2UI	CCWGG	5 cut(s)	19, 541, 769, 1278, 1308
Bst4CI	ACNGT	6 cut(s)	8, 39, 630, 746, 781, 844
Bst6I	CTCTTC	2 cut(s)	1255, 1792
BstACI	GRCGYC	1 cut(s)	506
BstAPI	GCANNNNNTGC	1 cut(s)	1421
BstBAI	YACGTR	1 cut(s)	75
BstC8I	GCNNGC	6 cut(s)	156, 466, 582, 586, 1323, 1585
BstDEI	CTNAG	6 cut(s)	131, 142, 996, 1193, 1971, 1991
BstDSI	CCRYGG	1 cut(s)	398
BstEII	GGTNACC	1 cut(s)	446
BstF5I	GGATG	2 cut(s)	1479, 1837
BstFNI	CGCG	1 cut(s)	459
BstH2I	RGCGCY	1 cut(s)	509
BstHHI	GCGC	2 cut(s)	464, 508
BstMAI	GTCTC	3 cut(s)	127, 636, 992
BstMCI	CGRYCG	1 cut(s)	1487
BstMWI	GCNNNNNNNGC	8 cut(s)	68, 465, 512, 521, 923, 1139, 1421, 1433
BstNI	CCWGG	5 cut(s)	19, 541, 769, 1278, 1308
BstPAI	GACNNNNGTC	1 cut(s)	1004
BstPI	GGTNACC	1 cut(s)	446
BstSCI	CCNGG	6 cut(s)	17, 539, 767, 1276, 1306, 1615
BstSFI	CTRYAG	4 cut(s)	441, 1134, 1326, 2031
BstSLI	GKGCMC	1 cut(s)	1206
BstUI	CGCG	1 cut(s)	459
BstV1I	GCAGC	6 cut(s)	368, 709, 1312, 1448, 1487, 1939
BstV2I	GAAGAC	2 cut(s)	1104, 1547
BstX2I	RGATCY	2 cut(s)	1075, 1188
BstXI	CCANNNNNNTGG	3 cut(s)	261, 405, 1427
BstYI	RGATCY	2 cut(s)	1075, 1188
Bsu15I	ATCGAT	1 cut(s)	1956
Bsu36I	CCTNAGG	1 cut(s)	1971
BsuI	GTATCC	1 cut(s)	87
BsuRI	GGCC	8 cut(s)	171, 211, 348, 1142, 1587, 1607, 1766, 2039
BsuTUI	ATCGAT	1 cut(s)	1956
BtgI	CCRYGG	1 cut(s)	398
BtgZI	GCGATG	1 cut(s)	1977
BtsCI	GGATG	2 cut(s)	1479, 1837
BtsI	GCAGTG	1 cut(s)	810
BtsIMutI	CAGTG	7 cut(s)	19, 626, 810, 818, 944, 993, 1721
BveI	ACCTGC	3 cut(s)	434, 1037, 1156
Cac8I	GCNNGC	6 cut(s)	156, 466, 582, 586, 1323, 1585
CciI	TCATGA	1 cut(s)	1494
CfoI	GCGC	2 cut(s)	464, 508
Cfr13I	GGNCC	5 cut(s)	592, 1140, 1168, 1259, 1548
ClaI	ATCGAT	1 cut(s)	1956
Csp6I	GTAC	6 cut(s)	455, 747, 859, 898, 1218, 1665
CspCI	CAANNNNNGTGG	2 cut(s)	483, 518
CviQI	GTAC	6 cut(s)	455, 747, 859, 898, 1218, 1665
DdeI	CTNAG	6 cut(s)	131, 142, 996, 1193, 1971, 1991
DinI	GGCGCC	1 cut(s)	507
DraI	TTTAAA	1 cut(s)	1287
EaeI	YGGCCR	4 cut(s)	169, 209, 1764, 2037
Eam1104I	CTCTTC	2 cut(s)	1255, 1792
EarI	CTCTTC	2 cut(s)	1255, 1792
Eco130I	CCWWGG	1 cut(s)	1669
Eco147I	AGGCCT	1 cut(s)	348
Eco24I	GRGCYC	2 cut(s)	331, 517
Eco47I	GGWCC	4 cut(s)	592, 1168, 1259, 1548
Eco57I	CTGAAG	1 cut(s)	267
Eco81I	CCTNAGG	1 cut(s)	1971
Eco88I	CYCGRG	1 cut(s)	866
Eco91I	GGTNACC	1 cut(s)	446
EcoO109I	RGGNCCY	1 cut(s)	1140
EcoO65I	GGTNACC	1 cut(s)	446
EcoRII	CCWGG	5 cut(s)	17, 539, 767, 1276, 1306
EcoT14I	CCWWGG	1 cut(s)	1669
EcoT22I	ATGCAT	1 cut(s)	1352
EcoT38I	GRGCYC	2 cut(s)	331, 517
EgeI	GGCGCC	1 cut(s)	507
EheI	GGCGCC	1 cut(s)	507
ErhI	CCWWGG	1 cut(s)	1669
Esp3I	CGTCTC	1 cut(s)	127
FalI	AAGNNNNNCTT	2 cut(s)	412, 444
FaqI	GGGAC	2 cut(s)	416, 1272
FbaI	TGATCA	3 cut(s)	180, 2002, 2011
FblI	GTMKAC	1 cut(s)	1017
Fnu4HI	GCNGC	9 cut(s)	357, 460, 723, 1326, 1413, 1425, 1437, 1476, 1928
FokI	GGATG	2 cut(s)	1466, 1844
FriOI	GRGCYC	2 cut(s)	331, 517
Fsp4HI	GCNGC	9 cut(s)	357, 460, 723, 1326, 1413, 1425, 1437, 1476, 1928
FspBI	CTAG	9 cut(s)	125, 570, 827, 1179, 1373, 1622, 1859, 1869, 2050
GlaI	GCGC	2 cut(s)	463, 507
GluI	GCNGC	9 cut(s)	357, 460, 723, 1326, 1413, 1425, 1437, 1476, 1928
GsuI	CTGGAG	1 cut(s)	1290
HaeII	RGCGCY	1 cut(s)	509
HaeIII	GGCC	8 cut(s)	171, 211, 348, 1142, 1587, 1607, 1766, 2039
HapII	CCGG	9 cut(s)	59, 80, 201, 789, 1094, 1232, 1551, 1617, 1914
HhaI	GCGC	2 cut(s)	464, 508
Hin1I	GRCGYC	1 cut(s)	506
Hin6I	GCGC	2 cut(s)	462, 506
HinP1I	GCGC	2 cut(s)	462, 506
HincII	GTYRAC	2 cut(s)	435, 1018
HindII	GTYRAC	2 cut(s)	435, 1018
HpaII	CCGG	9 cut(s)	59, 80, 201, 789, 1094, 1232, 1551, 1617, 1914
HphI	GGTGA	7 cut(s)	286, 387, 1221, 1448, 1903, 1987, 1997
Hpy166II	GTNNAC	7 cut(s)	435, 877, 1018, 1204, 1360, 1456, 1719
Hpy188I	TCNGA	7 cut(s)	43, 247, 476, 556, 607, 1484, 1994
Hpy188III	TCNNGA	9 cut(s)	80, 100, 797, 827, 1192, 1398, 1495, 1816, 1859
Hpy8I	GTNNAC	7 cut(s)	435, 877, 1018, 1204, 1360, 1456, 1719
HpyAV	CCTTC	3 cut(s)	659, 817, 1024
HpyCH4III	ACNGT	6 cut(s)	8, 39, 630, 746, 781, 844
HpyCH4IV	ACGT	2 cut(s)	74, 1824
HpyF10VI	GCNNNNNNNGC	8 cut(s)	68, 465, 512, 521, 923, 1139, 1421, 1433
HpyF3I	CTNAG	6 cut(s)	131, 142, 996, 1193, 1971, 1991
HpySE526I	ACGT	2 cut(s)	74, 1824
Hsp92I	GRCGYC	1 cut(s)	506
HspAI	GCGC	2 cut(s)	462, 506
KasI	GGCGCC	1 cut(s)	505
Kpn2I	TCCGGA	1 cut(s)	79
Ksp22I	TGATCA	3 cut(s)	180, 2002, 2011
LmnI	GCTCC	5 cut(s)	119, 761, 785, 1309, 1972
Lsp1109I	GCAGC	6 cut(s)	368, 709, 1312, 1448, 1487, 1939
LweI	GCATC	1 cut(s)	1954
MaeI	CTAG	9 cut(s)	125, 570, 827, 1179, 1373, 1622, 1859, 1869, 2050
MaeII	ACGT	2 cut(s)	74, 1824
MaeIII	GTNAC	7 cut(s)	422, 446, 624, 942, 1330, 1375, 1816
MboII	GAAGA	6 cut(s)	1057, 1109, 1242, 1547, 1762, 1779
MflI	RGATCY	2 cut(s)	1075, 1188
MhlI	GDGCHC	4 cut(s)	331, 517, 766, 1206
MlsI	TGGCCA	4 cut(s)	171, 211, 1766, 2039
MluCI	AATT	8 cut(s)	44, 363, 600, 705, 1210, 1363, 1519, 1897
MluNI	TGGCCA	4 cut(s)	171, 211, 1766, 2039
Mly113I	GGCGCC	1 cut(s)	506
MlyI	GAGTC	8 cut(s)	92, 545, 817, 994, 1023, 1320, 1477, 1778
MnlI	CCTC	9 cut(s)	43, 172, 491, 1027, 1035, 1765, 1849, 1865, 1872
Mox20I	TGGCCA	4 cut(s)	171, 211, 1766, 2039
Mph1103I	ATGCAT	1 cut(s)	1352
MroI	TCCGGA	1 cut(s)	79
MscI	TGGCCA	4 cut(s)	171, 211, 1766, 2039
MseI	TTAA	5 cut(s)	366, 1185, 1286, 1884, 2043
MslI	CAYNNNNRTG	1 cut(s)	1637
Msp20I	TGGCCA	4 cut(s)	171, 211, 1766, 2039
MspA1I	CMGCKG	1 cut(s)	1427
MspI	CCGG	9 cut(s)	59, 80, 201, 789, 1094, 1232, 1551, 1617, 1914
MspR9I	CCNGG	6 cut(s)	19, 541, 769, 1278, 1308, 1617
MvaI	CCWGG	5 cut(s)	19, 541, 769, 1278, 1308
MvnI	CGCG	1 cut(s)	459
MwoI	GCNNNNNNNGC	8 cut(s)	68, 465, 512, 521, 923, 1139, 1421, 1433
NarI	GGCGCC	1 cut(s)	506
NciI	CCSGG	1 cut(s)	1617
NlaIV	GGNNCC	5 cut(s)	507, 787, 1141, 1260, 1416
NmuCI	GTSAC	5 cut(s)	422, 624, 942, 1375, 1816
NsiI	ATGCAT	1 cut(s)	1352
PagI	TCATGA	1 cut(s)	1494
PaqCI	CACCTGC	1 cut(s)	1037
PceI	AGGCCT	1 cut(s)	348
PcsI	WCGNNNNNNNCGW	1 cut(s)	1821
PfeI	GAWTC	4 cut(s)	53, 189, 392, 1062
PfoI	TCCNGGA	1 cut(s)	1306
PkrI	GCNGC	9 cut(s)	358, 461, 724, 1327, 1414, 1426, 1438, 1477, 1929
Ple19I	CGATCG	1 cut(s)	1487
PleI	GAGTC	8 cut(s)	91, 545, 817, 994, 1022, 1319, 1476, 1778
PluTI	GGCGCC	1 cut(s)	509
PpsI	GAGTC	8 cut(s)	91, 545, 817, 994, 1022, 1319, 1476, 1778
Ppu21I	YACGTR	1 cut(s)	75
PshAI	GACNNNNGTC	1 cut(s)	1004
PshBI	ATTAAT	1 cut(s)	2043
PsiI	TTATAA	1 cut(s)	1368
Psp6I	CCWGG	5 cut(s)	17, 539, 767, 1276, 1306
PspEI	GGTNACC	1 cut(s)	446
PspGI	CCWGG	5 cut(s)	17, 539, 767, 1276, 1306
PspN4I	GGNNCC	5 cut(s)	507, 787, 1141, 1260, 1416
PspPI	GGNCC	5 cut(s)	592, 1140, 1168, 1259, 1548
PstI	CTGCAG	2 cut(s)	445, 1330
PsuI	RGATCY	2 cut(s)	1075, 1188
PvuI	CGATCG	1 cut(s)	1487
RsaI	GTAC	6 cut(s)	456, 748, 860, 899, 1219, 1666
RsaNI	GTAC	6 cut(s)	455, 747, 859, 898, 1218, 1665
RseI	CAYNNNNRTG	1 cut(s)	1637
SalI	GTCGAC	1 cut(s)	1016
SaqAI	TTAA	5 cut(s)	366, 1185, 1286, 1884, 2043
SatI	GCNGC	9 cut(s)	357, 460, 723, 1326, 1413, 1425, 1437, 1476, 1928
Sau96I	GGNCC	5 cut(s)	592, 1140, 1168, 1259, 1548
SchI	GAGTC	8 cut(s)	92, 545, 817, 994, 1023, 1320, 1477, 1778
ScrFI	CCNGG	6 cut(s)	19, 541, 769, 1278, 1308, 1617
SduI	GDGCHC	4 cut(s)	331, 517, 766, 1206
SfaNI	GCATC	1 cut(s)	1954
SfcI	CTRYAG	4 cut(s)	441, 1134, 1326, 2031
SfoI	GGCGCC	1 cut(s)	507
SinI	GGWCC	4 cut(s)	592, 1168, 1259, 1548
SmiMI	CAYNNNNRTG	1 cut(s)	1637
SpeI	ACTAGT	1 cut(s)	1621
Sse9I	AATT	8 cut(s)	44, 363, 600, 705, 1210, 1363, 1519, 1897
SseBI	AGGCCT	1 cut(s)	348
SsiI	CCGC	3 cut(s)	459, 1412, 1425
SspDI	GGCGCC	1 cut(s)	505
SspMI	CTAG	9 cut(s)	125, 570, 827, 1179, 1373, 1622, 1859, 1869, 2050
StuI	AGGCCT	1 cut(s)	348
StyD4I	CCNGG	6 cut(s)	17, 539, 767, 1276, 1306, 1615
StyI	CCWWGG	1 cut(s)	1669
TaaI	ACNGT	6 cut(s)	8, 39, 630, 746, 781, 844
TaiI	ACGT	2 cut(s)	77, 1827
TaqI	TCGA	7 cut(s)	228, 331, 390, 696, 1017, 1314, 1956
TaqII	GACCGA	1 cut(s)	1477
TasI	AATT	8 cut(s)	44, 363, 600, 705, 1210, 1363, 1519, 1897
TatI	WGTACW	2 cut(s)	746, 897
TauI	GCSGC	3 cut(s)	462, 1415, 1427
TfiI	GAWTC	4 cut(s)	53, 189, 392, 1062
Tru1I	TTAA	5 cut(s)	366, 1185, 1286, 1884, 2043
Tru9I	TTAA	5 cut(s)	366, 1185, 1286, 1884, 2043
TscAI	CASTG	7 cut(s)	19, 633, 817, 825, 951, 1000, 1721
TseFI	GTSAC	5 cut(s)	422, 624, 942, 1375, 1816
TseI	GCWGC	6 cut(s)	356, 722, 1325, 1436, 1475, 1927
Tsp45I	GTSAC	5 cut(s)	422, 624, 942, 1375, 1816
TspDTI	ATGAA	5 cut(s)	1057, 1401, 1625, 1649, 1706
TspGWI	ACGGA	1 cut(s)	151
TspRI	CASTG	7 cut(s)	19, 633, 817, 825, 951, 1000, 1721
VneI	GTGCAC	1 cut(s)	1202
VpaK11BI	GGWCC	4 cut(s)	592, 1168, 1259, 1548
VspI	ATTAAT	1 cut(s)	2043
XapI	RAATTY	1 cut(s)	1210
XbaI	TCTAGA	2 cut(s)	826, 1858
XmiI	GTMKAC	1 cut(s)	1017
XspI	CTAG	9 cut(s)	125, 570, 827, 1179, 1373, 1622, 1859, 1869, 2050
Zsp2I	ATGCAT	1 cut(s)	1352

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.