Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0004268

Physical Location & Seq

Genomic Coordinates Forward (+)

13381590 .. 13387724

Gene Structure 6135 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000011860

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3078 bp

ATGGCGGCAGCCGGAGGGGAGCTTTCGATGTTTTCGGTTGTGGAGGATGTGCTTCAGCAGCACGGTACTAGTCGAATCGGAGATCTTGATTTAGTGGAGTCTAGAAAAGCTGAGCAAGCCGCATCGAGACGAAATGAGGCGGCTGGGTGGCTTAGAAAGGTGATTGGTGTCGTCGTGGCTAAAGATTTGCCGGCAGAGCCTTCTGAGGAAGAGTTCAGGCTTGGATTGAGAAGTGGGATTATCCTCTGCAATGCTATCAATAAGGTTCAACCAGGAGCAGTGCCCAAGGTGGTGGAAAGTCCATCTGATTCAGCTTTGATTCCTGATGGAGCATTGTCGGCGTTCCAATACTTTGAGAATCTGAGGAACTTCCTTGTTGCTATTGAGGGGATGGGGCTGCCTACATTTGAGGCATCTGATCTTGAACAGGGAGGCAAATCTGCAAGGGTTGTAAATACAGTTCTGGCGCTCAAATCCTACAGTGAGTGGAAACATACGGGAGGAAATGGGACATGGAAATTTGGTGGAAATGTAAAACCGACCACGTCCGTCAAGTCTTTTGTGAGAAAAAATTCGGAGCCATTTATGAATTCCTTGTCAAGGACGTCATCAATGAATGAAAAATCTTCGAACTCTTTCACCTCTGATCTTGATTCTAATCAAATGACTAGTTCCCGGTCCTTGAGTATGCTTGTCCGTGCAGTTCTGTTAGATAAGAAGCCTGAAGACGTTCCAATGTTGGTAGAGTCTGTTCTAAACAAGGTTGTGGAGCAATTTGAGCAACGCCTTTCCAGCCAATATGAATTGACAAATACAAGTCCAAAAGATGTTGCTGTTTCTCATGGCAACCAACCTCCAATGAAATTCGCCTCTTGTGATAAAAGGATAGAAGACAATCTCAAAGTAATAAAGAGAGAGGAATCTTTTAATAAAAGTTACATATCCGATGAGGAATCGAAAAGCCGGCTGCTTAAACAGCAAATGATTTTTGATCAACAACAAAGAGATGTTCGGGAACTAAAGCAAACCCTTCACACAACAAAATCTGGTATTCAGTTTATGAAAATGAAGTTTCATGAGGAGTTCCAGAATATTGGTTTGCACATTCATGGCCTAGCTCATGCTGCGAGTGGATATCACAAAGTTCTTGAAGAAAACCGAAAGCTCTACAATCAAGTCCAAGACCTCAAAGGAAGTATCAGGGTTTATTGTCGAGTGAGACCCTTCTTATCCGGACAGTCAAATTGTTTGAGCTGTGTGGATCATATGGAAGATGGAAATATCACTATTAACACCCCCTCAAGGCATGGGAAAGGACAAAGAACCTTCAGCTTCAATAAAGTCTTCGGGCCATCTGCAACCCAAGCGGACGTCTTATCTGACATGCAACCACTGATTCGTTCTGTCCTTGATGGTTACAATGTCTGCATATTTGCATATGGTCAAACAGGATCAGGGAAAACTTTCACCATGACTGGACCCAGAGAGCTTACAGAGAAACGCCAAGGTGTAAATTATAGGGCTTTGGGAGACTTGTTTCTCATAGCAGATCAAAGAAAGGACACCTTCCACTATGATGTTTCTGTTCAGATGATTGAGATTTACAACGAGCAAGTCCGGGATCTCCTTGTTACTGATGGAGCTAACAAAAGATATCCTTTACTAGTTTTGCTTAACTTATTTATCACATTAGAGATTCGCAACAGTTCTCAGACAGGTCTCAGTGTGCCAGATGCAAATATTATTCGTGTGTCCTCGACATCTGATGTTATTGATCTGATGAACCTTGGACATAAGAATCGGGTTGTTGGTGCAACTGCTCTAAATGATCGAAGTAGTCGCTCTCACAGCTGCTTGACTGTTCACGTTCAAGGACGGGATTTGACTACTGGATCTATTCTTCGTGGCTGTATGCACCTGGTTGACCTTGCGGGAAGTGAGAGGGTAGACAAATCTGAGGTAACAGGGGATAGATTGAAGGAAGCACAACATATTAATAGATCTCTCTCAGCTTTGGGTGATGTGATTGCTTCCCTTGCACAAAAGAATCCTCATGTTCCTTATAGGAATAGCAAGCTAACACAGTTGCTCCAAGATTCACTTGGTGGACAGGCCAAGACGCTTATGTTTGTTCACATAAGCCCTGAGCCAGATGCTATTGGTGAAAGTATAAGTACACTTAAGTTTGCCGAACGAGTAGCCACAGTTGAGCTTGGTGCTGCCAAAGTAAACAAAGATGGTGCAGATGTGAAAGCTCTCAAAGAACAGATTGCTGGTCTTAGGGCAGCACTGGCCAGGAGAGAAGAGGAAGCCGAACAACGCCCTGTTCTAGGCAGCTCTGATAAATACAAGACAAAAGCAGGGGAATTGTCACCTCTTCCTCAGAACCATCAGGGTACAGACATCATGGGAGAACAGTTTGGCTTCCGGCAACCAATGGGAAATCTTGGCAATATTGAGCTTCATAACAACTCTGCCCCAAGGCAAAAAAGACAAAACTTTGATGTTGATGAGCTACTAGCAAATTCACCTCCATGGCCTCCAGTTAAGAGTCCTGGCCAGAATCGTGGGGATGATGATAAAGACATGGTGGGCTCAGGTGACTGGGTCGATAAAGTTATGGTGAACAAGCAAGAAGTAGGCAGAGTTGGAAATCCCTTGGGAGGCTGGGGAGCAGACAATGAGAACTTATCTGATGTTTTCTACCAAAAATATCTCCAAGATTCTTCTAAAATTTATCCAGAACAATCCTACAACATGTTCACAGCAAGCAACGGGTTCAGTGCTGCTAGTAATGATGATATGGATGACCTTGATGCTGCCACTAGCGATTCTTCAGAGCCAGATTTGCTCTGGCAATTCAATCAAACTAAACTTATCAGCACAGGCAACGGCATTGGGTCTAAAACCAAGAAACCTAACGCAAAGCCAGTAAAAAGCCCAGAACTAAGCAAGCATTTGAATCCTTCTCTGGGCCCTTCGCCTTCACGGAAACCTTTGAATGGGTTGCCACATAGGACAGCATGGCAGCCAGCTCCAACAGCTGAGATGAAACGCAAAGCTGCTCATAGAAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003774 GO:0003777 GO:0003779 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005871 GO:0005875 GO:0006810 GO:0006928 GO:0007017 GO:0007018 GO:0007097 GO:0008017 GO:0008092 GO:0008150 GO:0008569 GO:0009987 GO:0015629 GO:0015630 GO:0015631 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031534 GO:0032991 GO:0042623 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043621 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0046907 GO:0051012 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051647 GO:0051649 GO:0051656 GO:1990939

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CH Kinesin Microtub_bd

Protein Analysis

1026

Amino Acids

113.11

Weight (kDa)

8.32

Isoelectric Point (pI)

46.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CH	PF00307	43 - 161	1.7e-12	Calponin homology (CH) domain
Microtub_bd	PF16796	384 - 543	1.2e-43	Microtubule binding
Kinesin	PF00225	405 - 735	4.2e-105	Kinesin motor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004268)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47500 AT2G47500
fragaria_vesca	FvH4_2g26160 FvH4_2g26160 FvH4_2g26160
malus_domestica	MD00G1140500.v1.1 MD03G1292600.v1.1
prunus_persica	Prupe.8G265600_v2.0.a1 Prupe.8G265600_v2.0.a1
pyrus_communis	pycom03g23180 pycom11g27320
rosa_chinensis	RchiOBHm_Chr5g0061681 RchiOBHm_Chr6g0294551 RchiOBHm_Chr6g0294561
rosa_laevigata	RLG00000003184 RLG00000011860
rosa_multiflora	Rmu_co8460257.1_g000001 Rmu_sc0004268.1_g000003 Rmu_sc0004268.1_g000004 Rmu_sc0042489.1_g000001 Rmu_ssc0000248.1_g000004
rosa_roxburghii	Rroxscaffold_3G00250060 Rroxscaffold_7G00173230 Rroxscaffold_7G00197400
rosa_rugosa	Rorug06G0246000
rosa_samantha	Rh6AG358300 Rh6BG365000 Rh6BG365100 Rh6CG372100 Rh6DG358900 Rh7DG248300
rosa_wichuraiana	Rw6G031250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	608, 1374
AccI	GTMKAC	1 cut(s)	1947
AccIII	TCCGGA	1 cut(s)	1232
AciI	CCGC	5 cut(s)	5, 120, 140, 1367, 1931
AclWI	GGATC	4 cut(s)	1269, 1459, 1629, 1900
AcoI	YGGCCR	2 cut(s)	2292, 2557
AcsI	RAATTY	6 cut(s)	518, 571, 589, 863, 2524, 2733
AcuI	CTGAAG	4 cut(s)	38, 744, 1312, 2820
AcyI	GRCGYC	2 cut(s)	605, 1371
AdeI	CACNNNGTG	1 cut(s)	2105
AfaI	GTAC	3 cut(s)	67, 2176, 2398
AfiI	CCNNNNNNNGG	6 cut(s)	600, 1302, 2330, 2663, 2972, 3002
AflII	CTTAAG	1 cut(s)	2180
AflIII	ACRYGT	1 cut(s)	2757
AgsI	TTSAA	9 cut(s)	269, 425, 1151, 1336, 1871, 1978, 2863, 2962, 3001
AhlI	ACTAGT	3 cut(s)	68, 668, 1663
AjiI	CACGTC	1 cut(s)	546
AjnI	CCWGG	4 cut(s)	271, 1917, 2294, 2554
Alw26I	GTCTC	4 cut(s)	121, 1213, 1524, 1724
AlwI	GGATC	4 cut(s)	1269, 1459, 1629, 1900
Aor13HI	TCCGGA	1 cut(s)	1232
AoxI	GGCC	7 cut(s)	1111, 1349, 2112, 2292, 2537, 2557, 2974
ApaI	GGGCCC	1 cut(s)	2978
ApoI	RAATTY	6 cut(s)	518, 571, 589, 863, 2524, 2733
AseI	ATTAAT	1 cut(s)	1995
Asp700I	GAANNNNTTC	4 cut(s)	571, 635, 729, 1463
AspLEI	GCGC	1 cut(s)	469
AspS9I	GGNCC	5 cut(s)	678, 1349, 1478, 2974, 2975
AsuC2I	CCSGG	2 cut(s)	676, 1619
AsuHPI	GGTGA	9 cut(s)	172, 631, 1459, 2030, 2174, 2364, 2520, 2612, 2635
AsuII	TTCGAA	1 cut(s)	629
AvaII	GGWCC	2 cut(s)	678, 1478
BaeGI	GKGCMC	2 cut(s)	285, 2978
BalI	TGGCCA	2 cut(s)	2294, 2559
BanII	GRGCYC	2 cut(s)	2597, 2978
BbsI	GAAGAC	3 cut(s)	732, 897, 1336
BccI	CCATC	9 cut(s)	310, 320, 385, 1268, 1360, 1406, 1631, 2231, 2397
BceAI	ACGGC	1 cut(s)	2908
BciT130I	CCWGG	4 cut(s)	273, 1919, 2296, 2556
BclI	TGATCA	1 cut(s)	991
BcnI	CCSGG	2 cut(s)	676, 1619
BcoDI	GTCTC	4 cut(s)	121, 1213, 1524, 1724
BcuI	ACTAGT	3 cut(s)	68, 668, 1663
BfaI	CTAG	9 cut(s)	69, 102, 669, 1115, 1664, 2330, 2519, 2790, 2826
BfmI	CTRYAG	1 cut(s)	478
BfoI	RGCGCY	1 cut(s)	470
BfrI	CTTAAG	1 cut(s)	2180
BglII	AGATCT	2 cut(s)	82, 2000
BlpI	GCTNAGC	1 cut(s)	111
Bme1390I	CCNGG	6 cut(s)	273, 676, 1619, 1919, 2296, 2556
Bme18I	GGWCC	2 cut(s)	678, 1478
BmgBI	CACGTC	1 cut(s)	546
BmgT120I	GGNCC	5 cut(s)	678, 1349, 1478, 2974, 2975
BmiI	GGNNCC	3 cut(s)	579, 1480, 2976
BmrFI	CCNGG	6 cut(s)	273, 676, 1619, 1919, 2296, 2556
BmrI	ACTGGG	1 cut(s)	2614
BmsI	GCATC	5 cut(s)	131, 422, 1723, 2143, 2806
BmuI	ACTGGG	1 cut(s)	2614
BpiI	GAAGAC	3 cut(s)	732, 897, 1336
BpmI	CTGGAG	1 cut(s)	2526
Bpu10I	CCTNAGC	2 cut(s)	2145, 2596
Bpu1102I	GCTNAGC	1 cut(s)	111
Bpu14I	TTCGAA	1 cut(s)	629
BpuEI	CTTGAG	2 cut(s)	703, 1285
BpuMI	CCSGG	2 cut(s)	676, 1619
BsaBI	GATNNNNATC	1 cut(s)	657
BsaHI	GRCGYC	2 cut(s)	605, 1371
BsaI	GGTCTC	2 cut(s)	1213, 1724
BsaJI	CCNNGG	6 cut(s)	285, 1504, 1786, 2480, 2534, 2658
BsaWI	WCCGGW	1 cut(s)	1232
BsaXI	ACNNNNNCTCC	2 cut(s)	2073, 2103
Bsc4I	CCNNNNNNNGG	6 cut(s)	600, 1302, 2330, 2663, 2972, 3002
Bse118I	RCCGGY	2 cut(s)	190, 963
Bse1I	ACTGG	6 cut(s)	1480, 1894, 2295, 2543, 2609, 2930
Bse3DI	GCAATG	1 cut(s)	256
Bse8I	GATNNNNATC	1 cut(s)	657
BseAI	TCCGGA	1 cut(s)	1232
BseBI	CCWGG	4 cut(s)	273, 1919, 2296, 2556
BseDI	CCNNGG	6 cut(s)	285, 1504, 1786, 2480, 2534, 2658
BseGI	GGATG	4 cut(s)	52, 396, 2578, 2812
BseJI	GATNNNNATC	1 cut(s)	657
BseLI	CCNNNNNNNGG	6 cut(s)	600, 1302, 2330, 2663, 2972, 3002
BseMI	GCAATG	1 cut(s)	256
BseNI	ACTGG	6 cut(s)	1480, 1894, 2295, 2543, 2609, 2930
BseRI	GAGGAG	1 cut(s)	1094
BseSI	GKGCMC	2 cut(s)	285, 2978
BseYI	CCCAGC	2 cut(s)	143, 2667
BsgI	GTGCAG	2 cut(s)	720, 2262
BshFI	GGCC	7 cut(s)	1113, 1351, 2114, 2294, 2539, 2559, 2976
BsiSI	CCGG	7 cut(s)	12, 191, 676, 964, 1233, 1618, 2428
BslFI	GGGAC	1 cut(s)	523
BslI	CCNNNNNNNGG	6 cut(s)	600, 1302, 2330, 2663, 2972, 3002
BsmAI	GTCTC	4 cut(s)	121, 1213, 1524, 1724
BsmBI	CGTCTC	1 cut(s)	121
BsmFI	GGGAC	1 cut(s)	523
BsnI	GGCC	7 cut(s)	1113, 1351, 2114, 2294, 2539, 2559, 2976
Bso31I	GGTCTC	2 cut(s)	1213, 1724
Bsp119I	TTCGAA	1 cut(s)	629
Bsp120I	GGGCCC	1 cut(s)	2974
Bsp1286I	GDGCHC	3 cut(s)	285, 2597, 2978
Bsp13I	TCCGGA	1 cut(s)	1232
Bsp1720I	GCTNAGC	1 cut(s)	111
Bsp19I	CCATGG	1 cut(s)	2534
BspACI	CCGC	5 cut(s)	5, 120, 140, 1367, 1931
BspANI	GGCC	7 cut(s)	1113, 1351, 2114, 2294, 2539, 2559, 2976
BspEI	TCCGGA	1 cut(s)	1232
BspHI	TCATGA	1 cut(s)	1075
BspLI	GGNNCC	3 cut(s)	579, 1480, 2976
BspPI	GGATC	4 cut(s)	1269, 1459, 1629, 1900
BspT104I	TTCGAA	1 cut(s)	629
BspTI	CTTAAG	1 cut(s)	2180
BspTNI	GGTCTC	2 cut(s)	1213, 1724
BsrDI	GCAATG	1 cut(s)	256
BsrFI	RCCGGY	2 cut(s)	190, 963
BsrI	ACTGG	6 cut(s)	1480, 1894, 2295, 2543, 2609, 2930
BssAI	RCCGGY	2 cut(s)	190, 963
BssECI	CCNNGG	6 cut(s)	285, 1504, 1786, 2480, 2534, 2658
BssNI	GRCGYC	2 cut(s)	605, 1371
BssT1I	CCWWGG	6 cut(s)	285, 1504, 1786, 2480, 2534, 2658
Bst2UI	CCWGG	4 cut(s)	273, 1919, 2296, 2556
Bst4CI	ACNGT	9 cut(s)	65, 460, 482, 1239, 1706, 1861, 2085, 2206, 2418
Bst6I	CTCTTC	3 cut(s)	204, 2298, 2382
BstACI	GRCGYC	2 cut(s)	605, 1371
BstAFI	CTTAAG	1 cut(s)	2180
BstBI	TTCGAA	1 cut(s)	629
BstC8I	GCNNGC	7 cut(s)	117, 192, 965, 2075, 2770, 2954, 3033
BstDSI	CCRYGG	1 cut(s)	2534
BstENI	CCTNNNNNAGG	2 cut(s)	598, 2328
BstF5I	GGATG	4 cut(s)	52, 396, 2578, 2812
BstH2I	RGCGCY	1 cut(s)	470
BstHHI	GCGC	1 cut(s)	469
BstMAI	GTCTC	4 cut(s)	121, 1213, 1524, 1724
BstNI	CCWGG	4 cut(s)	273, 1919, 2296, 2556
BstNSI	RCATGY	2 cut(s)	1387, 2761
BstSCI	CCNGG	6 cut(s)	271, 674, 1617, 1917, 2294, 2554
BstSFI	CTRYAG	1 cut(s)	478
BstSLI	GKGCMC	2 cut(s)	285, 2978
BstV2I	GAAGAC	3 cut(s)	732, 897, 1336
BstX2I	RGATCY	4 cut(s)	82, 1621, 1892, 2000
BstXI	CCANNNNNNTGG	3 cut(s)	292, 1094, 2567
BstYI	RGATCY	4 cut(s)	82, 1621, 1892, 2000
BsuRI	GGCC	7 cut(s)	1113, 1351, 2114, 2294, 2539, 2559, 2976
BtgI	CCRYGG	1 cut(s)	2534
BtrI	CACGTC	1 cut(s)	546
BtsCI	GGATG	4 cut(s)	52, 396, 2578, 2812
BtsI	GCAGTG	1 cut(s)	285
BtsIMutI	CAGTG	6 cut(s)	285, 487, 1391, 1729, 2288, 2788
Cac8I	GCNNGC	7 cut(s)	117, 192, 965, 2075, 2770, 2954, 3033
CciI	TCATGA	1 cut(s)	1075
CfoI	GCGC	1 cut(s)	469
Cfr10I	RCCGGY	2 cut(s)	190, 963
Cfr13I	GGNCC	5 cut(s)	678, 1349, 1478, 2974, 2975
CseI	GACGC	1 cut(s)	2128
CsiI	ACCWGGT	1 cut(s)	1917
Csp6I	GTAC	3 cut(s)	66, 2175, 2397
CviQI	GTAC	3 cut(s)	66, 2175, 2397
DraIII	CACNNNGTG	1 cut(s)	2105
EaeI	YGGCCR	2 cut(s)	2292, 2557
Eam1104I	CTCTTC	3 cut(s)	204, 2298, 2382
EarI	CTCTTC	3 cut(s)	204, 2298, 2382
Eco130I	CCWWGG	6 cut(s)	285, 1504, 1786, 2480, 2534, 2658
Eco24I	GRGCYC	2 cut(s)	2597, 2978
Eco31I	GGTCTC	2 cut(s)	1213, 1724
Eco32I	GATATC	2 cut(s)	1136, 1655
Eco47I	GGWCC	2 cut(s)	678, 1478
Eco57I	CTGAAG	4 cut(s)	38, 744, 1312, 2820
EcoNI	CCTNNNNNAGG	2 cut(s)	598, 2328
EcoO109I	RGGNCCY	1 cut(s)	2975
EcoRI	GAATTC	1 cut(s)	589
EcoRII	CCWGG	4 cut(s)	271, 1917, 2294, 2554
EcoRV	GATATC	2 cut(s)	1136, 1655
EcoT14I	CCWWGG	6 cut(s)	285, 1504, 1786, 2480, 2534, 2658
EcoT38I	GRGCYC	2 cut(s)	2597, 2978
ErhI	CCWWGG	6 cut(s)	285, 1504, 1786, 2480, 2534, 2658
Esp3I	CGTCTC	1 cut(s)	121
FalI	AAGNNNNNCTT	6 cut(s)	1550, 1582, 1642, 1674, 2085, 2117
FaqI	GGGAC	1 cut(s)	523
FauI	CCCGC	1 cut(s)	1924
FauNDI	CATATG	2 cut(s)	1266, 1438
FbaI	TGATCA	1 cut(s)	991
FblI	GTMKAC	1 cut(s)	1947
FokI	GGATG	4 cut(s)	59, 403, 2585, 2819
FriOI	GRGCYC	2 cut(s)	2597, 2978
FspBI	CTAG	9 cut(s)	69, 102, 669, 1115, 1664, 2330, 2519, 2790, 2826
GlaI	GCGC	1 cut(s)	468
GsaI	CCCAGC	2 cut(s)	147, 2671
GsuI	CTGGAG	1 cut(s)	2526
HaeII	RGCGCY	1 cut(s)	470
HaeIII	GGCC	7 cut(s)	1113, 1351, 2114, 2294, 2539, 2559, 2976
HapII	CCGG	7 cut(s)	12, 191, 676, 964, 1233, 1618, 2428
HgaI	GACGC	1 cut(s)	2128
HhaI	GCGC	1 cut(s)	469
Hin1I	GRCGYC	2 cut(s)	605, 1371
Hin6I	GCGC	1 cut(s)	467
HinP1I	GCGC	1 cut(s)	467
HincII	GTYRAC	1 cut(s)	1924
HindII	GTYRAC	1 cut(s)	1924
HpaII	CCGG	7 cut(s)	12, 191, 676, 964, 1233, 1618, 2428
HphI	GGTGA	9 cut(s)	172, 631, 1459, 2030, 2174, 2364, 2520, 2612, 2635
Hpy166II	GTNNAC	9 cut(s)	1864, 1924, 1948, 2108, 2134, 2177, 2230, 2626, 2763
Hpy8I	GTNNAC	9 cut(s)	1864, 1924, 1948, 2108, 2134, 2177, 2230, 2626, 2763
Hpy99I	CGWCG	1 cut(s)	176
HpyAV	CCTTC	9 cut(s)	210, 1040, 1234, 1336, 1576, 1972, 2976, 2988, 2994
HpyCH4III	ACNGT	9 cut(s)	65, 460, 482, 1239, 1706, 1861, 2085, 2206, 2418
HpyCH4IV	ACGT	5 cut(s)	545, 605, 729, 1371, 1866
HpySE526I	ACGT	5 cut(s)	545, 605, 729, 1371, 1866
Hsp92I	GRCGYC	2 cut(s)	605, 1371
HspAI	GCGC	1 cut(s)	467
Kpn2I	TCCGGA	1 cut(s)	1232
KroI	GCCGGC	2 cut(s)	190, 963
KroNI	GCCGGC	2 cut(s)	192, 965
Ksp22I	TGATCA	1 cut(s)	991
LmnI	GCTCC	9 cut(s)	19, 275, 329, 577, 769, 1640, 2094, 2672, 3040
LweI	GCATC	5 cut(s)	131, 422, 1723, 2143, 2806
MabI	ACCWGGT	1 cut(s)	1917
MaeI	CTAG	9 cut(s)	69, 102, 669, 1115, 1664, 2330, 2519, 2790, 2826
MaeII	ACGT	5 cut(s)	545, 605, 729, 1371, 1866
MaeIII	GTNAC	6 cut(s)	935, 1415, 1630, 1960, 2370, 2600
MflI	RGATCY	4 cut(s)	82, 1621, 1892, 2000
MhlI	GDGCHC	3 cut(s)	285, 2597, 2978
MlsI	TGGCCA	2 cut(s)	2294, 2559
MluNI	TGGCCA	2 cut(s)	2294, 2559
MlyI	GAGTC	3 cut(s)	107, 755, 2560
MmeI	TCCRAC	2 cut(s)	2629, 3062
Mox20I	TGGCCA	2 cut(s)	2294, 2559
MroI	TCCGGA	1 cut(s)	1232
MroNI	GCCGGC	2 cut(s)	190, 963
MroXI	GAANNNNTTC	4 cut(s)	571, 635, 729, 1463
MscI	TGGCCA	2 cut(s)	2294, 2559
MseI	TTAA	7 cut(s)	927, 972, 1290, 1674, 1995, 2181, 2547
MslI	CAYNNNNRTG	3 cut(s)	1107, 1575, 2533
Msp20I	TGGCCA	2 cut(s)	2294, 2559
MspA1I	CMGCKG	2 cut(s)	1851, 3044
MspCI	CTTAAG	1 cut(s)	2180
MspI	CCGG	7 cut(s)	12, 191, 676, 964, 1233, 1618, 2428
MspR9I	CCNGG	6 cut(s)	273, 676, 1619, 1919, 2296, 2556
MvaI	CCWGG	4 cut(s)	273, 1919, 2296, 2556
NaeI	GCCGGC	2 cut(s)	192, 965
NciI	CCSGG	2 cut(s)	676, 1619
NcoI	CCATGG	1 cut(s)	2534
NdeI	CATATG	2 cut(s)	1266, 1438
NgoMIV	GCCGGC	2 cut(s)	190, 963
NlaIV	GGNNCC	3 cut(s)	579, 1480, 2976
NmuCI	GTSAC	2 cut(s)	2370, 2600
NspI	RCATGY	2 cut(s)	1387, 2761
NspV	TTCGAA	1 cut(s)	629
PagI	TCATGA	1 cut(s)	1075
PciI	ACATGT	1 cut(s)	2757
PdiI	GCCGGC	2 cut(s)	192, 965
PdmI	GAANNNNTTC	4 cut(s)	571, 635, 729, 1463
PflFI	GACNNNGTC	2 cut(s)	544, 2606
PfoI	TCCNGGA	1 cut(s)	1617
PleI	GAGTC	3 cut(s)	106, 754, 2559
PpsI	GAGTC	3 cut(s)	106, 754, 2559
PscI	ACATGT	1 cut(s)	2757
PshBI	ATTAAT	1 cut(s)	1995
Psp6I	CCWGG	4 cut(s)	271, 1917, 2294, 2554
PspFI	CCCAGC	2 cut(s)	143, 2667
PspGI	CCWGG	4 cut(s)	271, 1917, 2294, 2554
PspN4I	GGNNCC	3 cut(s)	579, 1480, 2976
PspOMI	GGGCCC	1 cut(s)	2974
PspPI	GGNCC	5 cut(s)	678, 1349, 1478, 2974, 2975
PsrI	GAACNNNNNNTAC	4 cut(s)	444, 476, 735, 767
PsuI	RGATCY	4 cut(s)	82, 1621, 1892, 2000
PsyI	GACNNNGTC	2 cut(s)	544, 2606
PvuII	CAGCTG	2 cut(s)	1851, 3044
RsaI	GTAC	3 cut(s)	67, 2176, 2398
RsaNI	GTAC	3 cut(s)	66, 2175, 2397
RseI	CAYNNNNRTG	3 cut(s)	1107, 1575, 2533
SaqAI	TTAA	7 cut(s)	927, 972, 1290, 1674, 1995, 2181, 2547
Sau96I	GGNCC	5 cut(s)	678, 1349, 1478, 2974, 2975
SchI	GAGTC	3 cut(s)	107, 755, 2560
ScrFI	CCNGG	6 cut(s)	273, 676, 1619, 1919, 2296, 2556
SduI	GDGCHC	3 cut(s)	285, 2597, 2978
SexAI	ACCWGGT	1 cut(s)	1917
SfaNI	GCATC	5 cut(s)	131, 422, 1723, 2143, 2806
SfcI	CTRYAG	1 cut(s)	478
SfuI	TTCGAA	1 cut(s)	629
SinI	GGWCC	2 cut(s)	678, 1478
SmiMI	CAYNNNNRTG	3 cut(s)	1107, 1575, 2533
SmlI	CTYRAG	3 cut(s)	682, 1300, 2180
SmoI	CTYRAG	3 cut(s)	682, 1300, 2180
SpeI	ACTAGT	3 cut(s)	68, 668, 1663
SsiI	CCGC	5 cut(s)	5, 120, 140, 1367, 1931
SspI	AATATT	3 cut(s)	1093, 1741, 2455
SspMI	CTAG	9 cut(s)	69, 102, 669, 1115, 1664, 2330, 2519, 2790, 2826
StyD4I	CCNGG	6 cut(s)	271, 674, 1617, 1917, 2294, 2554
StyI	CCWWGG	6 cut(s)	285, 1504, 1786, 2480, 2534, 2658
TaaI	ACNGT	9 cut(s)	65, 460, 482, 1239, 1706, 1861, 2085, 2206, 2418
TaiI	ACGT	5 cut(s)	548, 608, 732, 1374, 1869
TaqI	TCGA	9 cut(s)	26, 73, 125, 629, 956, 1213, 1757, 1831, 2610
TatI	WGTACW	1 cut(s)	2174
TauI	GCSGC	3 cut(s)	8, 122, 143
Tru1I	TTAA	7 cut(s)	927, 972, 1290, 1674, 1995, 2181, 2547
Tru9I	TTAA	7 cut(s)	927, 972, 1290, 1674, 1995, 2181, 2547
TscAI	CASTG	6 cut(s)	285, 487, 1398, 1729, 2295, 2788
TseFI	GTSAC	2 cut(s)	2370, 2600
Tsp45I	GTSAC	2 cut(s)	2370, 2600
TspGWI	ACGGA	3 cut(s)	538, 686, 3004
TspRI	CASTG	6 cut(s)	285, 487, 1398, 1729, 2295, 2788
Tth111I	GACNNNGTC	2 cut(s)	544, 2606
Vha464I	CTTAAG	1 cut(s)	2180
VpaK11BI	GGWCC	2 cut(s)	678, 1478
VspI	ATTAAT	1 cut(s)	1995
XagI	CCTNNNNNAGG	2 cut(s)	598, 2328
XapI	RAATTY	6 cut(s)	518, 571, 589, 863, 2524, 2733
XbaI	TCTAGA	1 cut(s)	101
XceI	RCATGY	2 cut(s)	1387, 2761
XcmI	CCANNNNNNNNNTGG	2 cut(s)	2099, 2850
XmiI	GTMKAC	1 cut(s)	1947
XmnI	GAANNNNTTC	4 cut(s)	571, 635, 729, 1463
XspI	CTAG	9 cut(s)	69, 102, 669, 1115, 1664, 2330, 2519, 2790, 2826
ZraI	GACGTC	2 cut(s)	606, 1372

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.