Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0004268

Physical Location & Seq

Genomic Coordinates Reverse (-)

55840606 .. 55846906

Gene Structure 6301 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG372100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2517 bp

ATGGGGCTGCCTACATTTGAGGCATCTGATCTTGAACAAGGAGGCAAATCTGCAAGGGTTGTAAATACAGTTCTGGCGCTCAAATCCTACAGTGAGTGGAAACATACGGGAGGAAATGGGACATGGAAATTCGGTGGAAATGTAAAACCGACCACGTCCATCAAGTCTTTTGTGAGAAAAAATTCGGAGCCATTTATGAATTCCTTGTCAAGGACCTCATCAATGAATGAAAAATCTTCGAACTCTTTCACCTCTGATCTCGATTCTAATCAAATGACTAGTTCCCGCTCCTTGAGTATGCTTGTCCGTGCAGTTCTGTTAGATAAGAAGCCTGAAGACGTCCCAATGTTGGTAGAGTCTGTTCTAAACAAGGTTGTGGAGCAATTTGAGCAACGCCTTTCCAGCCAATATGAATTGACAAATACAAGTCCAAAAGATGTCGCTGTTTCTCATGGCAACCAACCTCCAATGAAATTCGCCTCTTGTGATAAAAGGATAGAAGACAATCTCAAAGTAATAAAGAGAGAGGAATCTTTTAATAAAAGTTACATCTCCGATGAGGAATCAAAAAGCCGGCTGCTTAAACAGCAAATGATTTTTGATCAACAACAAAGAGATGTTCGGGAACTAAAGCAAACCCTTCACACAACAAAATCTGGTATTCAGTTTATGAAAATGAAGTTTCATGAGGAGTTCCAGAATATTGGTTTGCACATTCATGGCCTAGCTCATGCTGCGAGTGGATATCACAAAGTTCTTGAAGAAAACCGAAAGCTCTACAATCAAGTCCAAGACCTCAAAGGAAGTATCAGGGTTTATTGTCGAGTGAGACCCTTCTTATCTGGACAGTCAAATTGTTTGAGCTGTGTGGATCATATGGAAGATGGAAATATCACTATTAACACCCCCTCAAGGCATGGGAAAGGACAAAGAACCTTCAGCTTCAATAAAACTGGACCCAGAGAGCTTACAGAGAAAAGCCAAGGTGTAAATTATAGGGCTTTGGGAGACTTGTTTCTCATAGCAGATCAAAGAAAGGACACTTTCCACTATGATGTTTCTGTTCAGATGATTGAGATCTACAACGAGCAAGTCCGGGATCTCCTTGTTACTGATGGAGCTAACAAAAGATATCCTTTACTAGTTTATTCTCAGACAGGTCTCAGTGTGCCAGATGCAAATATTATTCGTGTGTCCTCGACATCTGATGTTATTGATCTAATGAACCTTGGACATAAGAATCGGGTTGTTGGTGCAACTGCTCTAAATGATCGAAGTAGTCGCTCTCACAGCTGCTTGACTGTTCATGTTCAAGGACAGGATTTGACTACTGGATCTATTCTTCGTGGCTGTATGCACCTGGTTGATCTTGCGGGAAGTGAGAGGGTAGACAAATCCGAGGTAACAGGAGATAGATTGAAAGAAGCACAACATATTAATAGATCTCTCTCAGCTTTGGGTGATGTGATTGCTTCCCTTGCACAAAAGAATCCTCATGTTCCTTATAGGAATAGCAAGCTAACACAGTTGCTCCAAGATTCACTTGGTGGACAGGCCAAGACGCTTATGTTTGTTCACATAAGCCCTGAGCCAGATGCTATTGGTGAAAGTATAAGTACACTTAAGTTTGCTGAACGAGTAGCCACAGTTGAGCTTGGTGCTGCCAAAGTAAACAAAGATGGTGCAGATGTGAAAGCTCTCAAAGAACAGATTGCTGGTCTTAGGGCAGCACTGGCCAGGAGAGAAGAGGAAGCCGAACAACGCCCTGTTCTAGGCAGCTCTGATAAATACAAGACAAAAGCAGGGGAATTGTCACCTCTTCCTCTGAACCATCAGGGTACAGACATCATGGGAGAACAGTTTGGCTTCCGGCAACCAATGGGAAATCTTGGCAATATTGAGCTTCATAACAACTCTGCCCCAAGGCAAAAAAGACAAAACTTTGATGTTGATGAGCTACTAGCAAATTCACCTCCATGGCCCCCAGTTAAGAGTCCTGGCCAGAATCGTGGGGATGATGATAAAGACATGGGCTCAGGTGACTGGGTCGATAAAGTTATGGTGAACAAGCAAGAAGTAAGCAGAGTTGGAAATCCCTTGGGAGGCTGGGGAGCAGACAATGAGAACTTATCTGATGCTTTCTACCAAAAATATCTCCAAGATTCTTCTAAAATTTATCCAGAACAATCCTACAACATGTTCACAGCAAGCAACGGGTTCAGTGTTGCTAGTAATGATGATATGGATGACCTTGATGCTGCCACTAGCGATTCTTCAGAGCCAGATTTGCTCTGGCAATTCAATCAAACTAAACTTATCAGCACAGGCAACGGCATTGGGTCTAAAACCAAGAAACCTAACGCAAAGCCAGTAAAAAGCCCAGAACTAAGCAAGCATTTGAATCCTTCTCTGGGCCCTTCGCCTTCACGGAAACCTTTGAATGGGTTGCCACATAGGACAGCAAGGCAGCCAGCTCCGACAGCTGAGATGAAACGCAAAGCTGCTCATAGAAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003774 GO:0003777 GO:0003779 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005871 GO:0005875 GO:0006810 GO:0006928 GO:0007017 GO:0007018 GO:0007097 GO:0008017 GO:0008092 GO:0008150 GO:0008569 GO:0009987 GO:0015629 GO:0015630 GO:0015631 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031534 GO:0032991 GO:0042623 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043621 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0046907 GO:0051012 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051647 GO:0051649 GO:0051656 GO:1990939

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CH Kinesin Microtub_bd

Protein Analysis

838

Amino Acids

92.99

Weight (kDa)

8.87

Isoelectric Point (pI)

45.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	254 - 324	2.3e-10	Microtubule binding
Kinesin	PF00225	311 - 549	3.1e-76	Kinesin motor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004268)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47500 AT2G47500
fragaria_vesca	FvH4_2g26160 FvH4_2g26160 FvH4_2g26160
malus_domestica	MD00G1140500.v1.1 MD03G1292600.v1.1
prunus_persica	Prupe.8G265600_v2.0.a1 Prupe.8G265600_v2.0.a1
pyrus_communis	pycom03g23180 pycom11g27320
rosa_chinensis	RchiOBHm_Chr5g0061681 RchiOBHm_Chr6g0294551 RchiOBHm_Chr6g0294561
rosa_laevigata	RLG00000003184 RLG00000011860
rosa_multiflora	Rmu_co8460257.1_g000001 Rmu_sc0004268.1_g000003 Rmu_sc0004268.1_g000004 Rmu_sc0042489.1_g000001 Rmu_ssc0000248.1_g000004
rosa_roxburghii	Rroxscaffold_3G00250060 Rroxscaffold_7G00173230 Rroxscaffold_7G00197400
rosa_rugosa	Rorug06G0246000
rosa_samantha	Rh6AG358300 Rh6BG365000 Rh6BG365100 Rh6CG372100 Rh6DG358900 Rh7DG248300
rosa_wichuraiana	Rw6G031250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	342
AccBSI	CCGCTC	1 cut(s)	288
AccI	GTMKAC	1 cut(s)	1389
AciI	CCGC	2 cut(s)	286, 1373
AclWI	GGATC	3 cut(s)	879, 1107, 1342
AcoI	YGGCCR	2 cut(s)	1734, 1999
AcsI	RAATTY	6 cut(s)	128, 181, 199, 473, 1966, 2172
AcuI	CTGAAG	3 cut(s)	354, 922, 2259
AcyI	GRCGYC	1 cut(s)	339
AdeI	CACNNNGTG	1 cut(s)	1547
AfaI	GTAC	2 cut(s)	1618, 1840
AfiI	CCNNNNNNNGG	7 cut(s)	210, 349, 912, 1772, 2102, 2411, 2441
AflII	CTTAAG	1 cut(s)	1622
AflIII	ACRYGT	1 cut(s)	2196
AgsI	TTSAA	8 cut(s)	35, 761, 946, 1313, 1420, 2302, 2401, 2440
AhlI	ACTAGT	2 cut(s)	278, 1141
AjiI	CACGTC	1 cut(s)	156
AjnI	CCWGG	3 cut(s)	1359, 1736, 1996
Alw26I	GTCTC	3 cut(s)	823, 1002, 1166
AlwI	GGATC	3 cut(s)	879, 1107, 1342
AoxI	GGCC	6 cut(s)	721, 1554, 1734, 1979, 1999, 2413
ApaI	GGGCCC	1 cut(s)	2417
ApoI	RAATTY	6 cut(s)	128, 181, 199, 473, 1966, 2172
AseI	ATTAAT	1 cut(s)	1437
Asp700I	GAANNNNTTC	2 cut(s)	181, 245
AspLEI	GCGC	1 cut(s)	79
AspS9I	GGNCC	5 cut(s)	213, 956, 1980, 2413, 2414
AsuC2I	CCSGG	1 cut(s)	1097
AsuHPI	GGTGA	7 cut(s)	241, 1472, 1616, 1806, 1962, 2051, 2074
AsuII	TTCGAA	1 cut(s)	239
AvaII	GGWCC	2 cut(s)	213, 956
BaeGI	GKGCMC	1 cut(s)	2417
BalI	TGGCCA	2 cut(s)	1736, 2001
BanII	GRGCYC	2 cut(s)	2036, 2417
BbsI	GAAGAC	2 cut(s)	342, 507
BbvI	GCAGC	9 cut(s)	564, 721, 1280, 1648, 1739, 1788, 2245, 2479, 2488
BccI	CCATC	5 cut(s)	167, 878, 1109, 1673, 1839
BceAI	ACGGC	1 cut(s)	2347
BciT130I	CCWGG	3 cut(s)	1361, 1738, 1998
BclI	TGATCA	1 cut(s)	601
BcnI	CCSGG	1 cut(s)	1097
BcoDI	GTCTC	3 cut(s)	823, 1002, 1166
BcuI	ACTAGT	2 cut(s)	278, 1141
BfaI	CTAG	7 cut(s)	279, 725, 1142, 1772, 1961, 2229, 2265
BfmI	CTRYAG	1 cut(s)	88
BfoI	RGCGCY	1 cut(s)	80
BfrI	CTTAAG	1 cut(s)	1622
BglII	AGATCT	2 cut(s)	1077, 1442
Bme1390I	CCNGG	4 cut(s)	1097, 1361, 1738, 1998
Bme18I	GGWCC	2 cut(s)	213, 956
BmgBI	CACGTC	1 cut(s)	156
BmgT120I	GGNCC	5 cut(s)	213, 956, 1980, 2413, 2414
BmiI	GGNNCC	4 cut(s)	189, 958, 1982, 2415
BmrFI	CCNGG	4 cut(s)	1097, 1361, 1738, 1998
BmrI	ACTGGG	2 cut(s)	1979, 2053
BmsI	GCATC	5 cut(s)	32, 1165, 1585, 2125, 2245
BmuI	ACTGGG	2 cut(s)	1979, 2053
BpiI	GAAGAC	2 cut(s)	342, 507
Bpu10I	CCTNAGC	2 cut(s)	1587, 2035
Bpu14I	TTCGAA	1 cut(s)	239
BpuEI	CTTGAG	2 cut(s)	313, 895
BpuMI	CCSGG	1 cut(s)	1097
BsaBI	GATNNNNATC	2 cut(s)	267, 1076
BsaHI	GRCGYC	1 cut(s)	339
BsaI	GGTCTC	2 cut(s)	823, 1166
BsaJI	CCNNGG	6 cut(s)	982, 1228, 1398, 1922, 1976, 2097
BsaXI	ACNNNNNCTCC	2 cut(s)	1515, 1545
Bsc4I	CCNNNNNNNGG	7 cut(s)	210, 349, 912, 1772, 2102, 2411, 2441
Bse118I	RCCGGY	1 cut(s)	573
Bse1I	ACTGG	6 cut(s)	958, 1336, 1737, 1985, 2048, 2369
Bse8I	GATNNNNATC	2 cut(s)	267, 1076
BseBI	CCWGG	3 cut(s)	1361, 1738, 1998
BseDI	CCNNGG	6 cut(s)	982, 1228, 1398, 1922, 1976, 2097
BseGI	GGATG	2 cut(s)	2020, 2251
BseJI	GATNNNNATC	2 cut(s)	267, 1076
BseLI	CCNNNNNNNGG	7 cut(s)	210, 349, 912, 1772, 2102, 2411, 2441
BseMII	CTCAG	6 cut(s)	1166, 1177, 1464, 1578, 2049, 2475
BseNI	ACTGG	6 cut(s)	958, 1336, 1737, 1985, 2048, 2369
BseRI	GAGGAG	1 cut(s)	704
BseSI	GKGCMC	1 cut(s)	2417
BseXI	GCAGC	9 cut(s)	564, 721, 1280, 1648, 1739, 1788, 2245, 2479, 2488
BseYI	CCCAGC	1 cut(s)	2106
BsgI	GTGCAG	2 cut(s)	330, 1704
BshFI	GGCC	6 cut(s)	723, 1556, 1736, 1981, 2001, 2415
BsiSI	CCGG	3 cut(s)	574, 1096, 1870
BslFI	GGGAC	2 cut(s)	133, 326
BslI	CCNNNNNNNGG	7 cut(s)	210, 349, 912, 1772, 2102, 2411, 2441
BsmAI	GTCTC	3 cut(s)	823, 1002, 1166
BsmFI	GGGAC	2 cut(s)	133, 326
BsnI	GGCC	6 cut(s)	723, 1556, 1736, 1981, 2001, 2415
Bso31I	GGTCTC	2 cut(s)	823, 1166
Bsp119I	TTCGAA	1 cut(s)	239
Bsp120I	GGGCCC	1 cut(s)	2413
Bsp1286I	GDGCHC	2 cut(s)	2036, 2417
Bsp19I	CCATGG	1 cut(s)	1976
BspACI	CCGC	2 cut(s)	286, 1373
BspANI	GGCC	6 cut(s)	723, 1556, 1736, 1981, 2001, 2415
BspCNI	CTCAG	6 cut(s)	1165, 1176, 1463, 1579, 2048, 2476
BspHI	TCATGA	1 cut(s)	685
BspLI	GGNNCC	4 cut(s)	189, 958, 1982, 2415
BspPI	GGATC	3 cut(s)	879, 1107, 1342
BspT104I	TTCGAA	1 cut(s)	239
BspTI	CTTAAG	1 cut(s)	1622
BspTNI	GGTCTC	2 cut(s)	823, 1166
BsrBI	CCGCTC	1 cut(s)	288
BsrFI	RCCGGY	1 cut(s)	573
BsrI	ACTGG	6 cut(s)	958, 1336, 1737, 1985, 2048, 2369
BssAI	RCCGGY	1 cut(s)	573
BssECI	CCNNGG	6 cut(s)	982, 1228, 1398, 1922, 1976, 2097
BssNI	GRCGYC	1 cut(s)	339
BssT1I	CCWWGG	5 cut(s)	982, 1228, 1922, 1976, 2097
Bst2UI	CCWGG	3 cut(s)	1361, 1738, 1998
Bst4CI	ACNGT	7 cut(s)	70, 92, 849, 1303, 1527, 1648, 1860
Bst6I	CTCTTC	2 cut(s)	1740, 1824
BstACI	GRCGYC	1 cut(s)	339
BstAFI	CTTAAG	1 cut(s)	1622
BstBI	TTCGAA	1 cut(s)	239
BstC8I	GCNNGC	5 cut(s)	575, 1517, 2209, 2393, 2472
BstDEI	CTNAG	8 cut(s)	1152, 1163, 1450, 1587, 1721, 2035, 2387, 2484
BstDSI	CCRYGG	1 cut(s)	1976
BstENI	CCTNNNNNAGG	2 cut(s)	208, 1770
BstF5I	GGATG	2 cut(s)	2020, 2251
BstH2I	RGCGCY	1 cut(s)	80
BstHHI	GCGC	1 cut(s)	79
BstMAI	GTCTC	3 cut(s)	823, 1002, 1166
BstMWI	GCNNNNNNNGC	9 cut(s)	388, 402, 586, 734, 1290, 1478, 1733, 2287, 2480
BstNI	CCWGG	3 cut(s)	1361, 1738, 1998
BstNSI	RCATGY	1 cut(s)	2200
BstSCI	CCNGG	4 cut(s)	1095, 1359, 1736, 1996
BstSFI	CTRYAG	1 cut(s)	88
BstSLI	GKGCMC	1 cut(s)	2417
BstV1I	GCAGC	9 cut(s)	564, 721, 1280, 1648, 1739, 1788, 2245, 2479, 2488
BstV2I	GAAGAC	2 cut(s)	342, 507
BstX2I	RGATCY	4 cut(s)	1077, 1099, 1334, 1442
BstXI	CCANNNNNNTGG	2 cut(s)	704, 2009
BstYI	RGATCY	4 cut(s)	1077, 1099, 1334, 1442
BsuRI	GGCC	6 cut(s)	723, 1556, 1736, 1981, 2001, 2415
BtgI	CCRYGG	1 cut(s)	1976
BtrI	CACGTC	1 cut(s)	156
BtsCI	GGATG	2 cut(s)	2020, 2251
BtsIMutI	CAGTG	4 cut(s)	97, 1171, 1730, 2227
Cac8I	GCNNGC	5 cut(s)	575, 1517, 2209, 2393, 2472
CciI	TCATGA	1 cut(s)	685
CfoI	GCGC	1 cut(s)	79
Cfr10I	RCCGGY	1 cut(s)	573
Cfr13I	GGNCC	5 cut(s)	213, 956, 1980, 2413, 2414
CseI	GACGC	1 cut(s)	1570
CsiI	ACCWGGT	1 cut(s)	1359
Csp6I	GTAC	2 cut(s)	1617, 1839
CviQI	GTAC	2 cut(s)	1617, 1839
DdeI	CTNAG	8 cut(s)	1152, 1163, 1450, 1587, 1721, 2035, 2387, 2484
DraIII	CACNNNGTG	1 cut(s)	1547
EaeI	YGGCCR	2 cut(s)	1734, 1999
Eam1104I	CTCTTC	2 cut(s)	1740, 1824
EarI	CTCTTC	2 cut(s)	1740, 1824
Eco130I	CCWWGG	5 cut(s)	982, 1228, 1922, 1976, 2097
Eco24I	GRGCYC	2 cut(s)	2036, 2417
Eco31I	GGTCTC	2 cut(s)	823, 1166
Eco32I	GATATC	2 cut(s)	746, 1133
Eco47I	GGWCC	2 cut(s)	213, 956
Eco57I	CTGAAG	3 cut(s)	354, 922, 2259
EcoNI	CCTNNNNNAGG	2 cut(s)	208, 1770
EcoO109I	RGGNCCY	2 cut(s)	213, 2414
EcoRI	GAATTC	1 cut(s)	199
EcoRII	CCWGG	3 cut(s)	1359, 1736, 1996
EcoRV	GATATC	2 cut(s)	746, 1133
EcoT14I	CCWWGG	5 cut(s)	982, 1228, 1922, 1976, 2097
EcoT38I	GRGCYC	2 cut(s)	2036, 2417
ErhI	CCWWGG	5 cut(s)	982, 1228, 1922, 1976, 2097
FalI	AAGNNNNNCTT	4 cut(s)	1120, 1152, 1527, 1559
FaqI	GGGAC	2 cut(s)	133, 326
FauI	CCCGC	2 cut(s)	293, 1366
FauNDI	CATATG	1 cut(s)	876
FbaI	TGATCA	1 cut(s)	601
FblI	GTMKAC	1 cut(s)	1389
FokI	GGATG	2 cut(s)	2027, 2258
FriOI	GRGCYC	2 cut(s)	2036, 2417
FspBI	CTAG	7 cut(s)	279, 725, 1142, 1772, 1961, 2229, 2265
GlaI	GCGC	1 cut(s)	78
GsaI	CCCAGC	1 cut(s)	2110
HaeII	RGCGCY	1 cut(s)	80
HaeIII	GGCC	6 cut(s)	723, 1556, 1736, 1981, 2001, 2415
HapII	CCGG	3 cut(s)	574, 1096, 1870
HgaI	GACGC	1 cut(s)	1570
HhaI	GCGC	1 cut(s)	79
Hin1I	GRCGYC	1 cut(s)	339
Hin6I	GCGC	1 cut(s)	77
HinP1I	GCGC	1 cut(s)	77
HpaII	CCGG	3 cut(s)	574, 1096, 1870
HphI	GGTGA	7 cut(s)	241, 1472, 1616, 1806, 1962, 2051, 2074
Hpy166II	GTNNAC	7 cut(s)	1390, 1550, 1576, 1619, 1672, 2065, 2202
Hpy188III	TCNNGA	8 cut(s)	32, 260, 623, 686, 697, 758, 843, 2180
Hpy8I	GTNNAC	7 cut(s)	1390, 1550, 1576, 1619, 1672, 2065, 2202
HpyAV	CCTTC	6 cut(s)	650, 844, 946, 2415, 2427, 2433
HpyCH4III	ACNGT	7 cut(s)	70, 92, 849, 1303, 1527, 1648, 1860
HpyCH4IV	ACGT	2 cut(s)	155, 339
HpyCH4V	TGCA	8 cut(s)	53, 311, 712, 1178, 1256, 1357, 1481, 1685
HpyF10VI	GCNNNNNNNGC	9 cut(s)	388, 402, 586, 734, 1290, 1478, 1733, 2287, 2480
HpyF3I	CTNAG	8 cut(s)	1152, 1163, 1450, 1587, 1721, 2035, 2387, 2484
HpySE526I	ACGT	2 cut(s)	155, 339
Hsp92I	GRCGYC	1 cut(s)	339
HspAI	GCGC	1 cut(s)	77
KroI	GCCGGC	1 cut(s)	573
KroNI	GCCGGC	1 cut(s)	575
Ksp22I	TGATCA	1 cut(s)	601
LmnI	GCTCC	7 cut(s)	187, 293, 379, 1118, 1536, 2111, 2479
Lsp1109I	GCAGC	9 cut(s)	564, 721, 1280, 1648, 1739, 1788, 2245, 2479, 2488
LweI	GCATC	5 cut(s)	32, 1165, 1585, 2125, 2245
MabI	ACCWGGT	1 cut(s)	1359
MaeI	CTAG	7 cut(s)	279, 725, 1142, 1772, 1961, 2229, 2265
MaeII	ACGT	2 cut(s)	155, 339
MaeIII	GTNAC	5 cut(s)	545, 1108, 1402, 1812, 2039
MbiI	CCGCTC	1 cut(s)	288
MflI	RGATCY	4 cut(s)	1077, 1099, 1334, 1442
MhlI	GDGCHC	2 cut(s)	2036, 2417
MlsI	TGGCCA	2 cut(s)	1736, 2001
MluNI	TGGCCA	2 cut(s)	1736, 2001
MlyI	GAGTC	2 cut(s)	365, 2002
MmeI	TCCRAC	2 cut(s)	2068, 2501
Mox20I	TGGCCA	2 cut(s)	1736, 2001
MroNI	GCCGGC	1 cut(s)	573
MroXI	GAANNNNTTC	2 cut(s)	181, 245
MscI	TGGCCA	2 cut(s)	1736, 2001
MseI	TTAA	6 cut(s)	537, 582, 900, 1437, 1623, 1989
MslI	CAYNNNNRTG	3 cut(s)	717, 1053, 1975
Msp20I	TGGCCA	2 cut(s)	1736, 2001
MspA1I	CMGCKG	2 cut(s)	1293, 2483
MspCI	CTTAAG	1 cut(s)	1622
MspI	CCGG	3 cut(s)	574, 1096, 1870
MspR9I	CCNGG	4 cut(s)	1097, 1361, 1738, 1998
MvaI	CCWGG	3 cut(s)	1361, 1738, 1998
MwoI	GCNNNNNNNGC	9 cut(s)	388, 402, 586, 734, 1290, 1478, 1733, 2287, 2480
NaeI	GCCGGC	1 cut(s)	575
NciI	CCSGG	1 cut(s)	1097
NcoI	CCATGG	1 cut(s)	1976
NdeI	CATATG	1 cut(s)	876
NgoMIV	GCCGGC	1 cut(s)	573
NlaIV	GGNNCC	4 cut(s)	189, 958, 1982, 2415
NmuCI	GTSAC	2 cut(s)	1812, 2039
NspI	RCATGY	1 cut(s)	2200
NspV	TTCGAA	1 cut(s)	239
PagI	TCATGA	1 cut(s)	685
PciI	ACATGT	1 cut(s)	2196
PdiI	GCCGGC	1 cut(s)	575
PdmI	GAANNNNTTC	2 cut(s)	181, 245
PflFI	GACNNNGTC	2 cut(s)	154, 2045
PfoI	TCCNGGA	1 cut(s)	1095
PleI	GAGTC	2 cut(s)	364, 2001
PpsI	GAGTC	2 cut(s)	364, 2001
PpuMI	RGGWCCY	1 cut(s)	213
PscI	ACATGT	1 cut(s)	2196
PshBI	ATTAAT	1 cut(s)	1437
Psp5II	RGGWCCY	1 cut(s)	213
Psp6I	CCWGG	3 cut(s)	1359, 1736, 1996
PspFI	CCCAGC	1 cut(s)	2106
PspGI	CCWGG	3 cut(s)	1359, 1736, 1996
PspN4I	GGNNCC	4 cut(s)	189, 958, 1982, 2415
PspOMI	GGGCCC	1 cut(s)	2413
PspPI	GGNCC	5 cut(s)	213, 956, 1980, 2413, 2414
PspPPI	RGGWCCY	1 cut(s)	213
PsrI	GAACNNNNNNTAC	4 cut(s)	54, 86, 345, 377
PsuI	RGATCY	4 cut(s)	1077, 1099, 1334, 1442
PsyI	GACNNNGTC	2 cut(s)	154, 2045
PvuII	CAGCTG	2 cut(s)	1293, 2483
RsaI	GTAC	2 cut(s)	1618, 1840
RsaNI	GTAC	2 cut(s)	1617, 1839
RseI	CAYNNNNRTG	3 cut(s)	717, 1053, 1975
SaqAI	TTAA	6 cut(s)	537, 582, 900, 1437, 1623, 1989
Sau96I	GGNCC	5 cut(s)	213, 956, 1980, 2413, 2414
SchI	GAGTC	2 cut(s)	365, 2002
ScrFI	CCNGG	4 cut(s)	1097, 1361, 1738, 1998
SduI	GDGCHC	2 cut(s)	2036, 2417
SexAI	ACCWGGT	1 cut(s)	1359
SfaNI	GCATC	5 cut(s)	32, 1165, 1585, 2125, 2245
SfcI	CTRYAG	1 cut(s)	88
SfuI	TTCGAA	1 cut(s)	239
SinI	GGWCC	2 cut(s)	213, 956
SmiMI	CAYNNNNRTG	3 cut(s)	717, 1053, 1975
SmlI	CTYRAG	3 cut(s)	292, 910, 1622
SmoI	CTYRAG	3 cut(s)	292, 910, 1622
SpeI	ACTAGT	2 cut(s)	278, 1141
SsiI	CCGC	2 cut(s)	286, 1373
SspI	AATATT	3 cut(s)	703, 1183, 1897
SspMI	CTAG	7 cut(s)	279, 725, 1142, 1772, 1961, 2229, 2265
StyD4I	CCNGG	4 cut(s)	1095, 1359, 1736, 1996
StyI	CCWWGG	5 cut(s)	982, 1228, 1922, 1976, 2097
TaaI	ACNGT	7 cut(s)	70, 92, 849, 1303, 1527, 1648, 1860
TaiI	ACGT	2 cut(s)	158, 342
TaqI	TCGA	6 cut(s)	239, 261, 823, 1199, 1273, 2049
TatI	WGTACW	1 cut(s)	1616
Tru1I	TTAA	6 cut(s)	537, 582, 900, 1437, 1623, 1989
Tru9I	TTAA	6 cut(s)	537, 582, 900, 1437, 1623, 1989
TscAI	CASTG	4 cut(s)	97, 1171, 1737, 2227
TseFI	GTSAC	2 cut(s)	1812, 2039
Tsp45I	GTSAC	2 cut(s)	1812, 2039
TspGWI	ACGGA	2 cut(s)	296, 2443
TspRI	CASTG	4 cut(s)	97, 1171, 1737, 2227
Tth111I	GACNNNGTC	2 cut(s)	154, 2045
Vha464I	CTTAAG	1 cut(s)	1622
VpaK11BI	GGWCC	2 cut(s)	213, 956
VspI	ATTAAT	1 cut(s)	1437
XagI	CCTNNNNNAGG	2 cut(s)	208, 1770
XapI	RAATTY	6 cut(s)	128, 181, 199, 473, 1966, 2172
XceI	RCATGY	1 cut(s)	2200
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1541, 2289
XmiI	GTMKAC	1 cut(s)	1389
XmnI	GAANNNNTTC	2 cut(s)	181, 245
XspI	CTAG	7 cut(s)	279, 725, 1142, 1772, 1961, 2229, 2265
ZraI	GACGTC	1 cut(s)	340

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.