Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0004268

Physical Location & Seq

Genomic Coordinates Reverse (-)

55693594 .. 55700156

Gene Structure 6563 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG358300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2454 bp

ATGAATTCCTTGTCAAGGACCTCATCAATGAATGAAAAATCTTCAAACTCTTTCACCTCTGATCTCGATTCTAATCAAATGACTAGTTCCCGCTCCTTGAGTATGCTTGTCCGTGCAGTTCTGTTAGATAAGAAGCCTGAAGACGTTCCAATGTTGGTAGAGTCTGTTCTAAACAAGGTTGTGGAGCAATTTGAGCAACGCCTTTCCAGTCAATATGAATTGACAAATACAGGTCCAAAAGATGTCGCTGTTTCTCATGGCAACCAACCTCCAATGAAATTCACCTCTTGTGATAAAAGGATAGAAGACAATCTCAAAGTAATAAAGAGAGAGGAATCTTTTAATAAAAGTTACATCTCCGATGAGGAATCAAAAAGCCGGCTGCTTAAACAGCAAATGATTTTTGATCAACAACAAAGAGATGTTCGGGAACTAAAGCAAACCCTTCACACAACAAAATCTGGTATTCAGTTTATGAAAATGAAGTTTCATGAGGAGTTCCAGAATATTGGTTTGCACATTCATGGCCTAGCTCATGCTGCGAGTGGATATCACAAAGTTCTTGAAGAAAACCGAAAGCTCTACAATCAAGTCCAAGACCTCAAAGGAAGTATCAGGGTTTATTGTCGAGTGAGACCCTTCTTATCTGGACAGTCAAATTGTTTGAGCTGTGTGGATCATATGGAAGATGGAAATATCACTATTAACACCCCCTCAAGGCATGGGAAAGGACAAAGAACCTTCAGCTTCAATAAAGTCTTTGGGCCGTCTGCAACCCAAGCGGACGTCTTTTCTGACATGCAACCACTGATTCGTTCTGTCCTTGATGGTTACAATGTCTGCATATTTGCATATGGTCAAACAGGATCAGGGAAAACTTTCACCATGACTGGACCCAGAGAGCTTACAGAGAAAAGCCAAGGTGTAAATTATAGGGCTTTGGGAGACTTGTTTCTCATAGCAGATCAAAGAAAGGACACTTTCCACTATGATGTTTCTGTTCAGATGATTGAGATCTACAACGAGCAAGTCCGGGATCTCCTTGTTACTGATGGAGCTAACAAAAGATATCCTTTACTAGTTTATTCTCAGACAGGTCTCAGTGTGCCAGATGCAAATATTATTCGTGTGTCCTCGACATCTGATGTTATTGATCTAATGAACCTCGGACATAAGAATCGGGTTGTTGGTGCAACTGCTCTAAATGATCGAAGTAGTCGCTCTCACAGCTGCTTGACTGTTCACGTTCAAGGACAGGATTTGACTACTGGATCTATTCTTCGTGGCTGTATGCACCTGGTTGATCTTGCGGGAAGTGAGAGGGTAGACAAATCCGAGGTAACAGGAGATAGATTGAAGGAAGCACAACATATTAATAGATCTCTCTCAGCTTTGGGTGATGTGATTGCTTCCCTTGCACAAAAGAATCCTCATGTTCCTTATAGGAATAGCAAGCTAACACAGTTGCTCCAAGATTCACTTGGTGGACAGGCCAAGACGCTTATGTTTGTTCACATAAGCCCTGAGCCAGATGCTATTGGTGAAAGTATAAGTACACTTAAGTTTGCTGAACGAGTAGCCACAGTTGAGCTTGGTGCTGCCAAAGTAAACAAAGATGGTGCAGATGTGAAAGCTCTCAAAGAACAGATTGCTGGTCTTAGGGCAGCACTGGCCAGGAGAGAAGAGGAAGCCGAACAACGCCCTGTTCTAGGCAGCTCTGATAAATACAAGACAAAAGCAGGGGAATTGTCACCTCTTCCTCTGAACCATCAGGGTACAGACGTCATGGGAGAACAGTTTGGCTTCCGGCAACCAATGGGAAATCTTGGCAATATTGAGCTTCATAACAACTCTGCCCCAAGGCAAAAAAGACAAAACTTTGATGTTGATGAGCTACTAGCAAATTCACCTCCATGGCCCCCAGTTAAGAGTCCTGGCCAGAATCGTGGGGATGATGATAAAGACATGGGCTCAGGTGACTGGGTCGATAAAGTTATGGTGAACAAGCAAGAAGTAAGCAGAGTTGGAAATCCCTTGGGAGGCTGGGGAGCAGACAATGAGAACTTATCTGATGTTTTCTACCAAAAATATCTCCAAGATTCTTCTAAAATTTATCCAGAACAATCCTACAACATGTTCACAGCAAACAACGGGATTAGTGTTGCTAGTAATGATGATATGGATGACCTTGATGCTGCCACTAGCGATTCTTCAGAGCCAGATTTGCTCTGGCAATTCAATCAAACTAAACTTATCAGCACAGGCAACGGCATTGGGTCTAAAACCAAGAAACCTAACGCAAAGCCAGTAAAAAGCCCAGAACCAAGCAAGCATTTGAATCCTTCTCTGGGCCCTTCGCCTTCACGGAAACCTTTGAATGGGTTGCCACATAGGACAGCAAGGCAGCCAGCTCCAACAGCTGAGATGAAACGCAAAGCTGCTCATAGAAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003774 GO:0003777 GO:0003779 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005871 GO:0005875 GO:0006810 GO:0006928 GO:0007017 GO:0007018 GO:0007097 GO:0008017 GO:0008092 GO:0008150 GO:0008569 GO:0009987 GO:0015629 GO:0015630 GO:0015631 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031534 GO:0032991 GO:0042623 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043621 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0046907 GO:0051012 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051647 GO:0051649 GO:0051656 GO:1990939

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CH Kinesin Microtub_bd

Protein Analysis

817

Amino Acids

90.63

Weight (kDa)

8.38

Isoelectric Point (pI)

46.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	189 - 348	1.5e-44	Microtubule binding
Kinesin	PF00225	210 - 528	1.8e-106	Kinesin motor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004268)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47500 AT2G47500
fragaria_vesca	FvH4_2g26160 FvH4_2g26160 FvH4_2g26160
malus_domestica	MD00G1140500.v1.1 MD03G1292600.v1.1
prunus_persica	Prupe.8G265600_v2.0.a1 Prupe.8G265600_v2.0.a1
pyrus_communis	pycom03g23180 pycom11g27320
rosa_chinensis	RchiOBHm_Chr5g0061681 RchiOBHm_Chr6g0294551 RchiOBHm_Chr6g0294561
rosa_laevigata	RLG00000003184 RLG00000011860
rosa_multiflora	Rmu_co8460257.1_g000001 Rmu_sc0004268.1_g000003 Rmu_sc0004268.1_g000004 Rmu_sc0042489.1_g000001 Rmu_ssc0000248.1_g000004
rosa_roxburghii	Rroxscaffold_3G00250060 Rroxscaffold_7G00173230 Rroxscaffold_7G00197400
rosa_rugosa	Rorug06G0246000
rosa_samantha	Rh6AG358300 Rh6BG365000 Rh6BG365100 Rh6CG372100 Rh6DG358900 Rh7DG248300
rosa_wichuraiana	Rw6G031250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	789, 1785
AccBSI	CCGCTC	1 cut(s)	93
AccI	GTMKAC	1 cut(s)	1326
AciI	CCGC	3 cut(s)	91, 782, 1310
AclWI	GGATC	4 cut(s)	684, 874, 1044, 1279
AcoI	YGGCCR	2 cut(s)	1671, 1936
AcsI	RAATTY	4 cut(s)	4, 278, 1903, 2109
AcuI	CTGAAG	3 cut(s)	159, 727, 2196
AcyI	GRCGYC	2 cut(s)	786, 1782
AdeI	CACNNNGTG	1 cut(s)	1484
AfaI	GTAC	2 cut(s)	1555, 1777
AfiI	CCNNNNNNNGG	6 cut(s)	15, 717, 1709, 2039, 2348, 2378
AflII	CTTAAG	1 cut(s)	1559
AflIII	ACRYGT	1 cut(s)	2133
AgsI	TTSAA	8 cut(s)	45, 566, 751, 1250, 1357, 2239, 2338, 2377
AhlI	ACTAGT	2 cut(s)	83, 1078
AjnI	CCWGG	3 cut(s)	1296, 1673, 1933
Alw26I	GTCTC	3 cut(s)	628, 939, 1103
AlwI	GGATC	4 cut(s)	684, 874, 1044, 1279
AoxI	GGCC	7 cut(s)	526, 764, 1491, 1671, 1916, 1936, 2350
ApaI	GGGCCC	1 cut(s)	2354
ApeKI	GCWGC	9 cut(s)	382, 539, 1230, 1598, 1664, 1713, 2195, 2404, 2438
ApoI	RAATTY	4 cut(s)	4, 278, 1903, 2109
AseI	ATTAAT	1 cut(s)	1374
Asp700I	GAANNNNTTC	2 cut(s)	144, 878
AspS9I	GGNCC	7 cut(s)	18, 233, 764, 893, 1917, 2350, 2351
AsuC2I	CCSGG	1 cut(s)	1034
AsuHPI	GGTGA	9 cut(s)	46, 274, 874, 1409, 1553, 1743, 1899, 1988, 2011
AvaII	GGWCC	3 cut(s)	18, 233, 893
BaeGI	GKGCMC	1 cut(s)	2354
BaeI	ACNNNNGTAYC	2 cut(s)	1767, 1800
BalI	TGGCCA	2 cut(s)	1673, 1938
BanII	GRGCYC	2 cut(s)	1973, 2354
BbsI	GAAGAC	2 cut(s)	147, 312
BbvI	GCAGC	9 cut(s)	369, 526, 1217, 1585, 1676, 1725, 2182, 2416, 2425
BccI	CCATC	5 cut(s)	683, 821, 1046, 1610, 1776
BceAI	ACGGC	2 cut(s)	751, 2284
BciT130I	CCWGG	3 cut(s)	1298, 1675, 1935
BclI	TGATCA	1 cut(s)	406
BcnI	CCSGG	1 cut(s)	1034
BcoDI	GTCTC	3 cut(s)	628, 939, 1103
BcuI	ACTAGT	2 cut(s)	83, 1078
BfaI	CTAG	7 cut(s)	84, 530, 1079, 1709, 1898, 2166, 2202
BfrI	CTTAAG	1 cut(s)	1559
BglII	AGATCT	2 cut(s)	1014, 1379
BisI	GCNGC	9 cut(s)	383, 540, 1231, 1599, 1665, 1714, 2196, 2405, 2439
BlsI	GCNGC	9 cut(s)	384, 541, 1232, 1600, 1666, 1715, 2197, 2406, 2440
Bme1390I	CCNGG	4 cut(s)	1034, 1298, 1675, 1935
Bme18I	GGWCC	3 cut(s)	18, 233, 893
BmgT120I	GGNCC	7 cut(s)	18, 233, 764, 893, 1917, 2350, 2351
BmiI	GGNNCC	3 cut(s)	895, 1919, 2352
BmrFI	CCNGG	4 cut(s)	1034, 1298, 1675, 1935
BmrI	ACTGGG	2 cut(s)	1916, 1990
BmsI	GCATC	3 cut(s)	1102, 1522, 2182
BmuI	ACTGGG	2 cut(s)	1916, 1990
BpiI	GAAGAC	2 cut(s)	147, 312
Bpu10I	CCTNAGC	2 cut(s)	1524, 1972
BpuEI	CTTGAG	2 cut(s)	118, 700
BpuMI	CCSGG	1 cut(s)	1034
BsaBI	GATNNNNATC	2 cut(s)	72, 1013
BsaHI	GRCGYC	2 cut(s)	786, 1782
BsaI	GGTCTC	2 cut(s)	628, 1103
BsaJI	CCNNGG	6 cut(s)	919, 1165, 1335, 1859, 1913, 2034
BsaXI	ACNNNNNCTCC	2 cut(s)	1452, 1482
Bsc4I	CCNNNNNNNGG	6 cut(s)	15, 717, 1709, 2039, 2348, 2378
Bse118I	RCCGGY	1 cut(s)	378
Bse1I	ACTGG	7 cut(s)	207, 895, 1273, 1674, 1922, 1985, 2306
Bse8I	GATNNNNATC	2 cut(s)	72, 1013
BseBI	CCWGG	3 cut(s)	1298, 1675, 1935
BseDI	CCNNGG	6 cut(s)	919, 1165, 1335, 1859, 1913, 2034
BseGI	GGATG	2 cut(s)	1957, 2188
BseJI	GATNNNNATC	2 cut(s)	72, 1013
BseLI	CCNNNNNNNGG	6 cut(s)	15, 717, 1709, 2039, 2348, 2378
BseMII	CTCAG	6 cut(s)	1103, 1114, 1401, 1515, 1986, 2412
BseNI	ACTGG	7 cut(s)	207, 895, 1273, 1674, 1922, 1985, 2306
BseRI	GAGGAG	1 cut(s)	509
BseSI	GKGCMC	1 cut(s)	2354
BseXI	GCAGC	9 cut(s)	369, 526, 1217, 1585, 1676, 1725, 2182, 2416, 2425
BseYI	CCCAGC	1 cut(s)	2043
BsgI	GTGCAG	2 cut(s)	135, 1641
BshFI	GGCC	7 cut(s)	528, 766, 1493, 1673, 1918, 1938, 2352
BsiSI	CCGG	3 cut(s)	379, 1033, 1807
BslI	CCNNNNNNNGG	6 cut(s)	15, 717, 1709, 2039, 2348, 2378
BsmAI	GTCTC	3 cut(s)	628, 939, 1103
BsnI	GGCC	7 cut(s)	528, 766, 1493, 1673, 1918, 1938, 2352
Bso31I	GGTCTC	2 cut(s)	628, 1103
Bsp120I	GGGCCC	1 cut(s)	2350
Bsp1286I	GDGCHC	2 cut(s)	1973, 2354
Bsp19I	CCATGG	1 cut(s)	1913
BspACI	CCGC	3 cut(s)	91, 782, 1310
BspANI	GGCC	7 cut(s)	528, 766, 1493, 1673, 1918, 1938, 2352
BspCNI	CTCAG	6 cut(s)	1102, 1113, 1400, 1516, 1985, 2413
BspHI	TCATGA	1 cut(s)	490
BspLI	GGNNCC	3 cut(s)	895, 1919, 2352
BspPI	GGATC	4 cut(s)	684, 874, 1044, 1279
BspTI	CTTAAG	1 cut(s)	1559
BspTNI	GGTCTC	2 cut(s)	628, 1103
BsrBI	CCGCTC	1 cut(s)	93
BsrFI	RCCGGY	1 cut(s)	378
BsrI	ACTGG	7 cut(s)	207, 895, 1273, 1674, 1922, 1985, 2306
BssAI	RCCGGY	1 cut(s)	378
BssECI	CCNNGG	6 cut(s)	919, 1165, 1335, 1859, 1913, 2034
BssNI	GRCGYC	2 cut(s)	786, 1782
BssT1I	CCWWGG	4 cut(s)	919, 1859, 1913, 2034
Bst2UI	CCWGG	3 cut(s)	1298, 1675, 1935
Bst4CI	ACNGT	5 cut(s)	654, 1240, 1464, 1585, 1797
Bst6I	CTCTTC	2 cut(s)	1677, 1761
BstACI	GRCGYC	2 cut(s)	786, 1782
BstAFI	CTTAAG	1 cut(s)	1559
BstC8I	GCNNGC	4 cut(s)	380, 1454, 2330, 2409
BstDEI	CTNAG	7 cut(s)	1089, 1100, 1387, 1524, 1658, 1972, 2421
BstDSI	CCRYGG	1 cut(s)	1913
BstENI	CCTNNNNNAGG	2 cut(s)	13, 1707
BstF5I	GGATG	2 cut(s)	1957, 2188
BstMAI	GTCTC	3 cut(s)	628, 939, 1103
BstMWI	GCNNNNNNNGC	9 cut(s)	193, 391, 539, 779, 1227, 1415, 1670, 2224, 2417
BstNI	CCWGG	3 cut(s)	1298, 1675, 1935
BstNSI	RCATGY	2 cut(s)	802, 2137
BstSCI	CCNGG	4 cut(s)	1032, 1296, 1673, 1933
BstSLI	GKGCMC	1 cut(s)	2354
BstV1I	GCAGC	9 cut(s)	369, 526, 1217, 1585, 1676, 1725, 2182, 2416, 2425
BstV2I	GAAGAC	2 cut(s)	147, 312
BstX2I	RGATCY	4 cut(s)	1014, 1036, 1271, 1379
BstXI	CCANNNNNNTGG	2 cut(s)	509, 1946
BstYI	RGATCY	4 cut(s)	1014, 1036, 1271, 1379
BsuRI	GGCC	7 cut(s)	528, 766, 1493, 1673, 1918, 1938, 2352
BtgI	CCRYGG	1 cut(s)	1913
BtsCI	GGATG	2 cut(s)	1957, 2188
BtsIMutI	CAGTG	3 cut(s)	806, 1108, 1667
Cac8I	GCNNGC	4 cut(s)	380, 1454, 2330, 2409
CciI	TCATGA	1 cut(s)	490
Cfr10I	RCCGGY	1 cut(s)	378
Cfr13I	GGNCC	7 cut(s)	18, 233, 764, 893, 1917, 2350, 2351
CseI	GACGC	1 cut(s)	1507
CsiI	ACCWGGT	1 cut(s)	1296
Csp6I	GTAC	2 cut(s)	1554, 1776
CviQI	GTAC	2 cut(s)	1554, 1776
DdeI	CTNAG	7 cut(s)	1089, 1100, 1387, 1524, 1658, 1972, 2421
DraIII	CACNNNGTG	1 cut(s)	1484
EaeI	YGGCCR	2 cut(s)	1671, 1936
Eam1104I	CTCTTC	2 cut(s)	1677, 1761
EarI	CTCTTC	2 cut(s)	1677, 1761
Eco130I	CCWWGG	4 cut(s)	919, 1859, 1913, 2034
Eco24I	GRGCYC	2 cut(s)	1973, 2354
Eco31I	GGTCTC	2 cut(s)	628, 1103
Eco32I	GATATC	2 cut(s)	551, 1070
Eco47I	GGWCC	3 cut(s)	18, 233, 893
Eco57I	CTGAAG	3 cut(s)	159, 727, 2196
EcoNI	CCTNNNNNAGG	2 cut(s)	13, 1707
EcoO109I	RGGNCCY	2 cut(s)	18, 2351
EcoRI	GAATTC	1 cut(s)	4
EcoRII	CCWGG	3 cut(s)	1296, 1673, 1933
EcoRV	GATATC	2 cut(s)	551, 1070
EcoT14I	CCWWGG	4 cut(s)	919, 1859, 1913, 2034
EcoT38I	GRGCYC	2 cut(s)	1973, 2354
ErhI	CCWWGG	4 cut(s)	919, 1859, 1913, 2034
FalI	AAGNNNNNCTT	4 cut(s)	1057, 1089, 1464, 1496
FauI	CCCGC	2 cut(s)	98, 1303
FauNDI	CATATG	2 cut(s)	681, 853
FbaI	TGATCA	1 cut(s)	406
FblI	GTMKAC	1 cut(s)	1326
Fnu4HI	GCNGC	9 cut(s)	383, 540, 1231, 1599, 1665, 1714, 2196, 2405, 2439
FokI	GGATG	2 cut(s)	1964, 2195
FriOI	GRGCYC	2 cut(s)	1973, 2354
Fsp4HI	GCNGC	9 cut(s)	383, 540, 1231, 1599, 1665, 1714, 2196, 2405, 2439
FspBI	CTAG	7 cut(s)	84, 530, 1079, 1709, 1898, 2166, 2202
GluI	GCNGC	9 cut(s)	383, 540, 1231, 1599, 1665, 1714, 2196, 2405, 2439
GsaI	CCCAGC	1 cut(s)	2047
HaeIII	GGCC	7 cut(s)	528, 766, 1493, 1673, 1918, 1938, 2352
HapII	CCGG	3 cut(s)	379, 1033, 1807
HgaI	GACGC	1 cut(s)	1507
Hin1I	GRCGYC	2 cut(s)	786, 1782
HpaII	CCGG	3 cut(s)	379, 1033, 1807
HphI	GGTGA	9 cut(s)	46, 274, 874, 1409, 1553, 1743, 1899, 1988, 2011
Hpy166II	GTNNAC	8 cut(s)	1243, 1327, 1487, 1513, 1556, 1609, 2002, 2139
Hpy188III	TCNNGA	7 cut(s)	65, 428, 491, 502, 563, 648, 2117
Hpy8I	GTNNAC	8 cut(s)	1243, 1327, 1487, 1513, 1556, 1609, 2002, 2139
HpyAV	CCTTC	7 cut(s)	455, 649, 751, 1351, 2352, 2364, 2370
HpyCH4III	ACNGT	5 cut(s)	654, 1240, 1464, 1585, 1797
HpyCH4IV	ACGT	4 cut(s)	144, 786, 1245, 1782
HpyF10VI	GCNNNNNNNGC	9 cut(s)	193, 391, 539, 779, 1227, 1415, 1670, 2224, 2417
HpyF3I	CTNAG	7 cut(s)	1089, 1100, 1387, 1524, 1658, 1972, 2421
HpySE526I	ACGT	4 cut(s)	144, 786, 1245, 1782
Hsp92I	GRCGYC	2 cut(s)	786, 1782
KroI	GCCGGC	1 cut(s)	378
KroNI	GCCGGC	1 cut(s)	380
Ksp22I	TGATCA	1 cut(s)	406
LmnI	GCTCC	6 cut(s)	98, 184, 1055, 1473, 2048, 2416
Lsp1109I	GCAGC	9 cut(s)	369, 526, 1217, 1585, 1676, 1725, 2182, 2416, 2425
LweI	GCATC	3 cut(s)	1102, 1522, 2182
MabI	ACCWGGT	1 cut(s)	1296
MaeI	CTAG	7 cut(s)	84, 530, 1079, 1709, 1898, 2166, 2202
MaeII	ACGT	4 cut(s)	144, 786, 1245, 1782
MaeIII	GTNAC	6 cut(s)	350, 830, 1045, 1339, 1749, 1976
MbiI	CCGCTC	1 cut(s)	93
MflI	RGATCY	4 cut(s)	1014, 1036, 1271, 1379
MhlI	GDGCHC	2 cut(s)	1973, 2354
MlsI	TGGCCA	2 cut(s)	1673, 1938
MluNI	TGGCCA	2 cut(s)	1673, 1938
MlyI	GAGTC	2 cut(s)	170, 1939
MmeI	TCCRAC	2 cut(s)	2005, 2438
Mox20I	TGGCCA	2 cut(s)	1673, 1938
MroNI	GCCGGC	1 cut(s)	378
MroXI	GAANNNNTTC	2 cut(s)	144, 878
MscI	TGGCCA	2 cut(s)	1673, 1938
MseI	TTAA	6 cut(s)	342, 387, 705, 1374, 1560, 1926
MslI	CAYNNNNRTG	3 cut(s)	522, 990, 1912
Msp20I	TGGCCA	2 cut(s)	1673, 1938
MspA1I	CMGCKG	2 cut(s)	1230, 2420
MspCI	CTTAAG	1 cut(s)	1559
MspI	CCGG	3 cut(s)	379, 1033, 1807
MspR9I	CCNGG	4 cut(s)	1034, 1298, 1675, 1935
MvaI	CCWGG	3 cut(s)	1298, 1675, 1935
MwoI	GCNNNNNNNGC	9 cut(s)	193, 391, 539, 779, 1227, 1415, 1670, 2224, 2417
NaeI	GCCGGC	1 cut(s)	380
NciI	CCSGG	1 cut(s)	1034
NcoI	CCATGG	1 cut(s)	1913
NdeI	CATATG	2 cut(s)	681, 853
NgoMIV	GCCGGC	1 cut(s)	378
NlaIV	GGNNCC	3 cut(s)	895, 1919, 2352
NmuCI	GTSAC	2 cut(s)	1749, 1976
NspI	RCATGY	2 cut(s)	802, 2137
PagI	TCATGA	1 cut(s)	490
PciI	ACATGT	1 cut(s)	2133
PdiI	GCCGGC	1 cut(s)	380
PdmI	GAANNNNTTC	2 cut(s)	144, 878
PflFI	GACNNNGTC	1 cut(s)	1982
PfoI	TCCNGGA	1 cut(s)	1032
PkrI	GCNGC	9 cut(s)	384, 541, 1232, 1600, 1666, 1715, 2197, 2406, 2440
PleI	GAGTC	2 cut(s)	169, 1938
PpsI	GAGTC	2 cut(s)	169, 1938
PpuMI	RGGWCCY	1 cut(s)	18
PscI	ACATGT	1 cut(s)	2133
PshBI	ATTAAT	1 cut(s)	1374
Psp5II	RGGWCCY	1 cut(s)	18
Psp6I	CCWGG	3 cut(s)	1296, 1673, 1933
PspFI	CCCAGC	1 cut(s)	2043
PspGI	CCWGG	3 cut(s)	1296, 1673, 1933
PspN4I	GGNNCC	3 cut(s)	895, 1919, 2352
PspOMI	GGGCCC	1 cut(s)	2350
PspPI	GGNCC	7 cut(s)	18, 233, 764, 893, 1917, 2350, 2351
PspPPI	RGGWCCY	1 cut(s)	18
PsrI	GAACNNNNNNTAC	2 cut(s)	150, 182
PsuI	RGATCY	4 cut(s)	1014, 1036, 1271, 1379
PsyI	GACNNNGTC	1 cut(s)	1982
PvuII	CAGCTG	2 cut(s)	1230, 2420
RsaI	GTAC	2 cut(s)	1555, 1777
RsaNI	GTAC	2 cut(s)	1554, 1776
RseI	CAYNNNNRTG	3 cut(s)	522, 990, 1912
SaqAI	TTAA	6 cut(s)	342, 387, 705, 1374, 1560, 1926
SatI	GCNGC	9 cut(s)	383, 540, 1231, 1599, 1665, 1714, 2196, 2405, 2439
Sau96I	GGNCC	7 cut(s)	18, 233, 764, 893, 1917, 2350, 2351
SchI	GAGTC	2 cut(s)	170, 1939
ScrFI	CCNGG	4 cut(s)	1034, 1298, 1675, 1935
SduI	GDGCHC	2 cut(s)	1973, 2354
SexAI	ACCWGGT	1 cut(s)	1296
SfaNI	GCATC	3 cut(s)	1102, 1522, 2182
SinI	GGWCC	3 cut(s)	18, 233, 893
SmiMI	CAYNNNNRTG	3 cut(s)	522, 990, 1912
SmlI	CTYRAG	3 cut(s)	97, 715, 1559
SmoI	CTYRAG	3 cut(s)	97, 715, 1559
SpeI	ACTAGT	2 cut(s)	83, 1078
SsiI	CCGC	3 cut(s)	91, 782, 1310
SspI	AATATT	3 cut(s)	508, 1120, 1834
SspMI	CTAG	7 cut(s)	84, 530, 1079, 1709, 1898, 2166, 2202
StyD4I	CCNGG	4 cut(s)	1032, 1296, 1673, 1933
StyI	CCWWGG	4 cut(s)	919, 1859, 1913, 2034
TaaI	ACNGT	5 cut(s)	654, 1240, 1464, 1585, 1797
TaiI	ACGT	4 cut(s)	147, 789, 1248, 1785
TaqI	TCGA	5 cut(s)	66, 628, 1136, 1210, 1986
TatI	WGTACW	1 cut(s)	1553
Tru1I	TTAA	6 cut(s)	342, 387, 705, 1374, 1560, 1926
Tru9I	TTAA	6 cut(s)	342, 387, 705, 1374, 1560, 1926
TscAI	CASTG	3 cut(s)	813, 1108, 1674
TseFI	GTSAC	2 cut(s)	1749, 1976
TseI	GCWGC	9 cut(s)	382, 539, 1230, 1598, 1664, 1713, 2195, 2404, 2438
Tsp45I	GTSAC	2 cut(s)	1749, 1976
TspGWI	ACGGA	2 cut(s)	101, 2380
TspRI	CASTG	3 cut(s)	813, 1108, 1674
Tth111I	GACNNNGTC	1 cut(s)	1982
Vha464I	CTTAAG	1 cut(s)	1559
VpaK11BI	GGWCC	3 cut(s)	18, 233, 893
VspI	ATTAAT	1 cut(s)	1374
XagI	CCTNNNNNAGG	2 cut(s)	13, 1707
XapI	RAATTY	4 cut(s)	4, 278, 1903, 2109
XceI	RCATGY	2 cut(s)	802, 2137
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1478, 2226
XmiI	GTMKAC	1 cut(s)	1326
XmnI	GAANNNNTTC	2 cut(s)	144, 878
XspI	CTAG	7 cut(s)	84, 530, 1079, 1709, 1898, 2166, 2202
ZraI	GACGTC	2 cut(s)	787, 1783

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.