Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0004053

Physical Location & Seq

Genomic Coordinates Reverse (-)

5896255 .. 5898577

Gene Structure 2323 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000016361

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1728 bp

ATGGTGGTCAGCGACGCTGTCCCAAGTCCAACGGTGAAGAGGGAAGAACGCAAGCGCTTAAAGCACGGCCCCCATTTCTCCAAATGGAAGGTTCTTGTTGGGCCTTGTGATTGGGAGGAGTATTCAGCGGGCAAGGATGGAGCTGAAAGGTACAGAGTTCAAAACCTGCCTGGAAACGAGAGCCCAGGAGTGTATGAACTCGGAGTTGCTGTTCCGCGCAGTGGTTCAGGCCGTGGGATTAAAGCGGATCAAGTAGTCCCGGTTTATGTTGGACAAGCTGATATTGCGAGGACAAGGCTTCAGCAGTATGGCCGGACAGGGGCTCATTTGGGGAGGTCATGCTCAGGGAATCCGAGTGAGCAAATCTGTAAGGGGCCTGGATTGATTGAGGAGATGCTGGAAAGAGGATACTCCATTGTTTATAGATGGGCTCCTATGGGAACCAAAAGTGAGGCGGAGGGAACAGAAAGTCAGCTGCTTTATGCATTTAATTATGCGTGGAACACAAGGATCAATGGTGCACGGCGCCGTGATGATGTCCTTCAGAAAATCAAGGAAATTTCCTCAAAACCTACCCGATTTACCAATATTGTCCCGAGGCCTCTATCTTCCAGACAGAAGCAAGTCGGTATTGGACTTAACTCCAGCAATCTGGTTTCAACAGAGGACAAGTTCAGTAACTATGCTGATAGGGAGAGCAGGAATCTCATACCCCAAGTTTTCAAGTTTGGCAGATCACAGCCTAGGTTAGTTTCGGATGGAAGTGGGATTACTTGGGAAAATACTATAATTTGTGGGGTGGCTGTTGGTGATGGGTCCATATGTAGAAAGGCACCAGTTCAAGGAAGAAAGAGGTGTGCTGAACACAAAGGGACTAGGATTACTGGATCGATTACAGCTAGCAATGTCGACTCAAAATGCAGTTTTATCAGCAACAGAGAGTTGGTTTCATATAAAAGTGGCATTACTCAGGACAACACTGAAATTTGTGGGGTGGCTGCAAGTGATGGGTCTACCTGTAGAAGGCCTCCAGTTCAAGGAAGACAGAGGTGTGCTGAACACAAAGGGATGAGGATTACTGGATCGATTACAGCTAGTAATGTCGACTCAAAATGCAGTTTTATCAGCGACCGACAGTCTGTTTCATATAAAAGTGGCATTACTCAGGACAACACTGAAATTTGTGGGGTGGTTACAGGTAATGGGTCTGCTTGTAGAAGGCCTCCAGTTCCAGGAAATAAGAGGTGTGCTGTACACAAAGGGATGAGGATTACTGGATCGACTACAGCTAGCAATGTAGACTCAAAATGCAGTTTTATCAGCGACAGAGAGTCTGTTTCATGTAAAAGTGGCATTACTCAGGAGAACACTGAAATTTGTGGGGTGGTTACAGGTAATGGGTCTACTTGTAGAAGGCCTCCAGTTCCAGGAAGAGTGAGGTGCGCCATGCACAAAGGGATGAGGATTACTGGATCGACTACAGCTAGCAATGTAGACTCACAATGCAGTTTTTTCAGCAACAGAGAGTTTGTCTCATATAAAAGTGGCTTTACTTGGGAGAACACTGGAATTTGTGGGGCATGTACAAATAAAGGGTCTGCTTGTAGAAGGCCTCCAGTTCCAGGAAATAAGAGTGTTCTCAGCAACAAAGAGCTTGATAGTCATGGTGCATCAAATGTGAAATATGAACCGGTAGAGCTTCCACCAGTTCATGTTAGTGAGGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0008150 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0010087 GO:0010089 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0048580 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051172 GO:0051239 GO:0051252 GO:0051253 GO:0060255 GO:0065007 GO:0080050 GO:0080090 GO:0097100 GO:0097159 GO:1901363 GO:1902679 GO:1903506 GO:1903507 GO:2000026 GO:2000033 GO:2000034 GO:2000112 GO:2000113 GO:2000241 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

576

Amino Acids

62.37

Weight (kDa)

9.43

Isoelectric Point (pI)

45.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GIY_YIG_domain	PF19239	26 - 181	4e-64	GIY-YIG domain-containing protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004053)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26170 AT5G56780
fragaria_vesca	FvH4_1g07150 FvH4_1g07151 FvH4_1g07151 FvH4_1g07231
malus_domestica	MD02G1075500.v1.1 MD02G1076000.v1.1
prunus_persica	Prupe.7G212600_v2.0.a1
pyrus_communis	pycom02g05960 pycom02g06030
rosa_chinensis	RchiOBHm_Chr2g0093031 RchiOBHm_Chr2g0093041
rosa_laevigata	RLG00000016361 RLG00000016362
rosa_multiflora	Rmu_co8308583.1_g000001 Rmu_sc0034350.1_g000001 Rmu_sc0039828.1_g000001
rosa_roxburghii	Rroxscaffold_2G00148580 Rroxscaffold_2G00148600
rosa_rugosa	Rorug02G0031500 Rorug02G0031500 Rorug02G0031600 Rorug02G0031700 Rorug02G0031800
rosa_samantha	Rh2AG077400 Rh2BG078800 Rh2CG081000 Rh2CG081100 Rh2DG076200 Rh2DG076300
rosa_wichuraiana	Rw0G010360 Rw2G006880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	174
AccB1I	GGYRCC	2 cut(s)	525, 832
AccI	GTMKAC	6 cut(s)	909, 1013, 1104, 1299, 1403, 1494
AccII	CGCG	1 cut(s)	217
AciI	CCGC	4 cut(s)	128, 215, 245, 455
AclWI	GGATC	6 cut(s)	255, 518, 895, 1090, 1285, 1480
AcoI	YGGCCR	1 cut(s)	310
AcsI	RAATTY	5 cut(s)	558, 984, 1179, 1374, 1569
AcuI	CTGAAG	2 cut(s)	284, 527
AcyI	GRCGYC	1 cut(s)	526
AfaI	GTAC	3 cut(s)	152, 1254, 1585
AfeI	AGCGCT	1 cut(s)	56
AfiI	CCNNNNNNNGG	8 cut(s)	221, 319, 842, 1023, 1037, 1232, 1427, 1622
AgeI	ACCGGT	1 cut(s)	1690
AgsI	TTSAA	5 cut(s)	161, 660, 724, 842, 1037
AhdI	GACNNNNNGTC	2 cut(s)	1135, 1330
AjnI	CCWGG	6 cut(s)	169, 184, 376, 1231, 1426, 1621
AloI	GAACNNNNNNTCC	2 cut(s)	195, 227
AluBI	AGCT	9 cut(s)	143, 278, 475, 899, 1094, 1289, 1484, 1654, 1699
AluI	AGCT	9 cut(s)	143, 278, 475, 899, 1094, 1289, 1484, 1654, 1699
Alw21I	GWGCWC	1 cut(s)	523
Alw26I	GTCTC	1 cut(s)	1537
Alw44I	GTGCAC	1 cut(s)	519
AlwI	GGATC	6 cut(s)	255, 518, 895, 1090, 1285, 1480
Ama87I	CYCGRG	1 cut(s)	595
Aor51HI	AGCGCT	1 cut(s)	56
ApaLI	GTGCAC	1 cut(s)	519
ApeKI	GCWGC	2 cut(s)	475, 998
ApoI	RAATTY	5 cut(s)	558, 984, 1179, 1374, 1569
ArsI	GACNNNNNNTTYG	2 cut(s)	1580, 1612
AsiGI	ACCGGT	1 cut(s)	1690
AspA2I	CCTAGG	1 cut(s)	743
AspLEI	GCGC	4 cut(s)	57, 219, 528, 1445
AspS9I	GGNCC	4 cut(s)	68, 101, 374, 816
AsuC2I	CCSGG	1 cut(s)	260
AsuHPI	GGTGA	2 cut(s)	46, 821
AsuNHI	GCTAGC	3 cut(s)	899, 1289, 1484
AvaI	CYCGRG	1 cut(s)	595
AvaII	GGWCC	1 cut(s)	816
AvrII	CCTAGG	1 cut(s)	743
BaeGI	GKGCMC	1 cut(s)	523
BanI	GGYRCC	2 cut(s)	525, 832
BanII	GRGCYC	3 cut(s)	185, 325, 433
BarI	GAAGNNNNNNTAC	2 cut(s)	754, 786
BbsI	GAAGAC	1 cut(s)	1048
Bbv12I	GWGCWC	1 cut(s)	523
BbvI	GCAGC	2 cut(s)	462, 985
BccI	CCATC	5 cut(s)	131, 420, 752, 806, 1001
BceAI	ACGGC	4 cut(s)	82, 216, 513, 539
BciT130I	CCWGG	6 cut(s)	171, 186, 378, 1233, 1428, 1623
BciVI	GTATCC	1 cut(s)	401
BcnI	CCSGG	1 cut(s)	260
BcoDI	GTCTC	1 cut(s)	1537
BfaI	CTAG	6 cut(s)	744, 876, 900, 1095, 1290, 1485
BfmI	CTRYAG	3 cut(s)	1018, 1284, 1479
BfoI	RGCGCY	2 cut(s)	58, 529
BfuAI	ACCTGC	1 cut(s)	174
BfuI	GTATCC	1 cut(s)	401
BisI	GCNGC	2 cut(s)	476, 999
BlnI	CCTAGG	1 cut(s)	743
BlsI	GCNGC	2 cut(s)	477, 1000
Bme1390I	CCNGG	7 cut(s)	171, 186, 260, 378, 1233, 1428, 1623
Bme18I	GGWCC	1 cut(s)	816
BmeRI	GACNNNNNGTC	2 cut(s)	1135, 1330
BmeT110I	CYCGRG	1 cut(s)	595
BmgT120I	GGNCC	4 cut(s)	68, 101, 374, 816
BmiI	GGNNCC	7 cut(s)	70, 375, 432, 442, 527, 817, 834
BmrFI	CCNGG	7 cut(s)	171, 186, 260, 378, 1233, 1428, 1623
BmsI	GCATC	2 cut(s)	384, 1679
BmtI	GCTAGC	3 cut(s)	903, 1293, 1488
BpiI	GAAGAC	1 cut(s)	1048
BplI	GAGNNNNNCTC	2 cut(s)	1517, 1549
BpmI	CTGGAG	5 cut(s)	628, 1014, 1209, 1404, 1599
Bpu10I	CCTNAGC	1 cut(s)	343
BpuMI	CCSGG	1 cut(s)	260
Bsa29I	ATCGAT	2 cut(s)	890, 1085
BsaHI	GRCGYC	1 cut(s)	526
BsaJI	CCNNGG	4 cut(s)	184, 232, 596, 743
BsaWI	WCCGGW	1 cut(s)	1690
BsaXI	ACNNNNNCTCC	2 cut(s)	195, 225
Bsc4I	CCNNNNNNNGG	8 cut(s)	221, 319, 842, 1023, 1037, 1232, 1427, 1622
Bse118I	RCCGGY	1 cut(s)	1690
Bse3DI	GCAATG	3 cut(s)	910, 1300, 1495
BseBI	CCWGG	6 cut(s)	171, 186, 378, 1233, 1428, 1623
BseCI	ATCGAT	2 cut(s)	890, 1085
BseDI	CCNNGG	4 cut(s)	184, 232, 596, 743
BseGI	GGATG	5 cut(s)	142, 763, 1074, 1269, 1464
BseLI	CCNNNNNNNGG	8 cut(s)	221, 319, 842, 1023, 1037, 1232, 1427, 1622
BseMI	GCAATG	3 cut(s)	910, 1300, 1495
BseMII	CTCAG	5 cut(s)	357, 983, 1178, 1373, 1654
BseRI	GAGGAG	2 cut(s)	131, 404
BseSI	GKGCMC	1 cut(s)	523
BseXI	GCAGC	2 cut(s)	462, 985
Bsh1236I	CGCG	1 cut(s)	217
Bsh1285I	CGRYCG	1 cut(s)	1132
BshNI	GGYRCC	2 cut(s)	525, 832
BshTI	ACCGGT	1 cut(s)	1690
BshVI	ATCGAT	2 cut(s)	890, 1085
BsiEI	CGRYCG	1 cut(s)	1132
BsiHKAI	GWGCWC	1 cut(s)	523
BsiHKCI	CYCGRG	1 cut(s)	595
BsiSI	CCGG	3 cut(s)	260, 313, 1691
BslFI	GGGAC	4 cut(s)	5, 242, 578, 886
BslI	CCNNNNNNNGG	8 cut(s)	221, 319, 842, 1023, 1037, 1232, 1427, 1622
BsmAI	GTCTC	1 cut(s)	1537
BsmFI	GGGAC	4 cut(s)	5, 242, 578, 886
BsoBI	CYCGRG	1 cut(s)	595
Bsp1286I	GDGCHC	4 cut(s)	185, 325, 433, 523
Bsp1407I	TGTACA	2 cut(s)	1252, 1583
Bsp143I	GATC	7 cut(s)	247, 510, 734, 887, 1082, 1277, 1472
BspACI	CCGC	4 cut(s)	128, 215, 245, 455
BspCNI	CTCAG	5 cut(s)	356, 982, 1177, 1372, 1653
BspDI	ATCGAT	2 cut(s)	890, 1085
BspFNI	CGCG	1 cut(s)	217
BspLI	GGNNCC	7 cut(s)	70, 375, 432, 442, 527, 817, 834
BspMI	ACCTGC	1 cut(s)	174
BspOI	GCTAGC	3 cut(s)	903, 1293, 1488
BspPI	GGATC	6 cut(s)	255, 518, 895, 1090, 1285, 1480
BspT107I	GGYRCC	2 cut(s)	525, 832
BsrDI	GCAATG	3 cut(s)	910, 1300, 1495
BsrFI	RCCGGY	1 cut(s)	1690
BsrGI	TGTACA	2 cut(s)	1252, 1583
BssAI	RCCGGY	1 cut(s)	1690
BssECI	CCNNGG	4 cut(s)	184, 232, 596, 743
BssMI	GATC	7 cut(s)	247, 510, 734, 887, 1082, 1277, 1472
BssNI	GRCGYC	1 cut(s)	526
BssT1I	CCWWGG	1 cut(s)	743
Bst2UI	CCWGG	6 cut(s)	171, 186, 378, 1233, 1428, 1623
Bst4CI	ACNGT	2 cut(s)	34, 1137
Bst6I	CTCTTC	2 cut(s)	32, 1426
BstACI	GRCGYC	1 cut(s)	526
BstAUI	TGTACA	2 cut(s)	1252, 1583
BstC8I	GCNNGC	5 cut(s)	53, 130, 901, 1291, 1486
BstDEI	CTNAG	5 cut(s)	343, 969, 1164, 1359, 1640
BstDSI	CCRYGG	1 cut(s)	232
BstENI	CCTNNNNNAGG	1 cut(s)	1021
BstF5I	GGATG	5 cut(s)	142, 763, 1074, 1269, 1464
BstFNI	CGCG	1 cut(s)	217
BstH2I	RGCGCY	2 cut(s)	58, 529
BstHHI	GCGC	4 cut(s)	57, 219, 528, 1445
BstKTI	GATC	7 cut(s)	250, 513, 737, 890, 1085, 1280, 1475
BstMAI	GTCTC	1 cut(s)	1537
BstMBI	GATC	7 cut(s)	247, 510, 734, 887, 1082, 1277, 1472
BstMCI	CGRYCG	1 cut(s)	1132
BstMWI	GCNNNNNNNGC	2 cut(s)	61, 284
BstNI	CCWGG	6 cut(s)	171, 186, 378, 1233, 1428, 1623
BstNSI	RCATGY	1 cut(s)	1584
BstSCI	CCNGG	7 cut(s)	169, 184, 258, 376, 1231, 1426, 1621
BstSFI	CTRYAG	3 cut(s)	1018, 1284, 1479
BstSLI	GKGCMC	1 cut(s)	523
BstUI	CGCG	1 cut(s)	217
BstV1I	GCAGC	2 cut(s)	462, 985
BstV2I	GAAGAC	1 cut(s)	1048
BstXI	CCANNNNNNTGG	1 cut(s)	652
Bsu15I	ATCGAT	2 cut(s)	890, 1085
BsuI	GTATCC	1 cut(s)	401
BsuTUI	ATCGAT	2 cut(s)	890, 1085
BtgI	CCRYGG	1 cut(s)	232
BtsCI	GGATG	5 cut(s)	142, 763, 1074, 1269, 1464
BtsI	GCAGTG	1 cut(s)	226
BtsIMutI	CAGTG	5 cut(s)	226, 978, 1173, 1368, 1563
BveI	ACCTGC	1 cut(s)	174
Cac8I	GCNNGC	5 cut(s)	53, 130, 901, 1291, 1486
CfoI	GCGC	4 cut(s)	57, 219, 528, 1445
Cfr10I	RCCGGY	1 cut(s)	1690
Cfr13I	GGNCC	4 cut(s)	68, 101, 374, 816
ClaI	ATCGAT	2 cut(s)	890, 1085
CseI	GACGC	1 cut(s)	23
Csp6I	GTAC	3 cut(s)	151, 1253, 1584
CspAI	ACCGGT	1 cut(s)	1690
CviAII	CATG	6 cut(s)	339, 1341, 1447, 1581, 1664, 1712
CviQI	GTAC	3 cut(s)	151, 1253, 1584
DdeI	CTNAG	5 cut(s)	343, 969, 1164, 1359, 1640
DinI	GGCGCC	1 cut(s)	527
DpnI	GATC	7 cut(s)	249, 512, 736, 889, 1084, 1279, 1474
DpnII	GATC	7 cut(s)	247, 510, 734, 887, 1082, 1277, 1472
DriI	GACNNNNNGTC	2 cut(s)	1135, 1330
EaeI	YGGCCR	1 cut(s)	310
Eam1104I	CTCTTC	2 cut(s)	32, 1426
Eam1105I	GACNNNNNGTC	2 cut(s)	1135, 1330
EarI	CTCTTC	2 cut(s)	32, 1426
EciI	GGCGGA	1 cut(s)	470
Eco130I	CCWWGG	1 cut(s)	743
Eco147I	AGGCCT	5 cut(s)	601, 1027, 1222, 1417, 1612
Eco24I	GRGCYC	3 cut(s)	185, 325, 433
Eco47I	GGWCC	1 cut(s)	816
Eco47III	AGCGCT	1 cut(s)	56
Eco57I	CTGAAG	2 cut(s)	284, 527
Eco88I	CYCGRG	1 cut(s)	595
EcoNI	CCTNNNNNAGG	1 cut(s)	1021
EcoO109I	RGGNCCY	1 cut(s)	374
EcoRII	CCWGG	6 cut(s)	169, 184, 376, 1231, 1426, 1621
EcoT14I	CCWWGG	1 cut(s)	743
EcoT22I	ATGCAT	1 cut(s)	487
EcoT38I	GRGCYC	3 cut(s)	185, 325, 433
EgeI	GGCGCC	1 cut(s)	527
EheI	GGCGCC	1 cut(s)	527
ErhI	CCWWGG	1 cut(s)	743
FaeI	CATG	6 cut(s)	342, 1344, 1450, 1584, 1667, 1715
FaqI	GGGAC	4 cut(s)	5, 242, 578, 886
FatI	CATG	6 cut(s)	338, 1340, 1446, 1580, 1663, 1711
FauI	CCCGC	1 cut(s)	121
FauNDI	CATATG	1 cut(s)	821
FblI	GTMKAC	6 cut(s)	909, 1013, 1104, 1299, 1403, 1494
Fnu4HI	GCNGC	2 cut(s)	476, 999
FokI	GGATG	5 cut(s)	149, 770, 1081, 1276, 1471
FriOI	GRGCYC	3 cut(s)	185, 325, 433
Fsp4HI	GCNGC	2 cut(s)	476, 999
FspBI	CTAG	6 cut(s)	744, 876, 900, 1095, 1290, 1485
GlaI	GCGC	4 cut(s)	56, 218, 527, 1444
GluI	GCNGC	2 cut(s)	476, 999
GsuI	CTGGAG	5 cut(s)	628, 1014, 1209, 1404, 1599
HaeII	RGCGCY	2 cut(s)	58, 529
HapII	CCGG	3 cut(s)	260, 313, 1691
HgaI	GACGC	1 cut(s)	23
HhaI	GCGC	4 cut(s)	57, 219, 528, 1445
Hin1I	GRCGYC	1 cut(s)	526
Hin1II	CATG	6 cut(s)	342, 1344, 1450, 1584, 1667, 1715
Hin6I	GCGC	4 cut(s)	55, 217, 526, 1443
HinP1I	GCGC	4 cut(s)	55, 217, 526, 1443
HincII	GTYRAC	2 cut(s)	910, 1105
HindII	GTYRAC	2 cut(s)	910, 1105
HinfI	GANTC	7 cut(s)	349, 703, 911, 1106, 1301, 1331, 1496
HpaII	CCGG	3 cut(s)	260, 313, 1691
HphI	GGTGA	2 cut(s)	46, 821
Hpy166II	GTNNAC	8 cut(s)	521, 910, 1014, 1105, 1255, 1300, 1404, 1495
Hpy188I	TCNGA	4 cut(s)	203, 354, 546, 757
Hpy188III	TCNNGA	5 cut(s)	595, 612, 971, 1166, 1361
Hpy8I	GTNNAC	8 cut(s)	521, 910, 1014, 1105, 1255, 1300, 1404, 1495
Hpy99I	CGWCG	1 cut(s)	17
HpyAV	CCTTC	6 cut(s)	82, 551, 1017, 1212, 1407, 1602
HpyCH4III	ACNGT	2 cut(s)	34, 1137
HpyCH4V	TGCA	9 cut(s)	485, 521, 921, 1001, 1116, 1311, 1450, 1506, 1670
HpyF10VI	GCNNNNNNNGC	2 cut(s)	61, 284
HpyF3I	CTNAG	5 cut(s)	343, 969, 1164, 1359, 1640
Hsp92I	GRCGYC	1 cut(s)	526
Hsp92II	CATG	6 cut(s)	342, 1344, 1450, 1584, 1667, 1715
HspAI	GCGC	4 cut(s)	55, 217, 526, 1443
KasI	GGCGCC	1 cut(s)	525
Kzo9I	GATC	7 cut(s)	247, 510, 734, 887, 1082, 1277, 1472
LmnI	GCTCC	2 cut(s)	140, 436
Lsp1109I	GCAGC	2 cut(s)	462, 985
LweI	GCATC	2 cut(s)	384, 1679
MaeI	CTAG	6 cut(s)	744, 876, 900, 1095, 1290, 1485
MaeIII	GTNAC	3 cut(s)	677, 1192, 1387
MalI	GATC	7 cut(s)	249, 512, 736, 889, 1084, 1279, 1474
MboI	GATC	7 cut(s)	247, 510, 734, 887, 1082, 1277, 1472
MboII	GAAGA	6 cut(s)	49, 56, 600, 858, 1053, 1443
MhlI	GDGCHC	4 cut(s)	185, 325, 433, 523
MluCI	AATT	7 cut(s)	490, 558, 789, 984, 1179, 1374, 1569
Mly113I	GGCGCC	1 cut(s)	526
MlyI	GAGTC	5 cut(s)	905, 1100, 1295, 1340, 1490
MmeI	TCCRAC	2 cut(s)	53, 250
Mph1103I	ATGCAT	1 cut(s)	487
MseI	TTAA	4 cut(s)	59, 240, 489, 639
MslI	CAYNNNNRTG	1 cut(s)	1716
MspA1I	CMGCKG	2 cut(s)	128, 475
MspI	CCGG	3 cut(s)	260, 313, 1691
MspR9I	CCNGG	7 cut(s)	171, 186, 260, 378, 1233, 1428, 1623
MvaI	CCWGG	6 cut(s)	171, 186, 378, 1233, 1428, 1623
MvnI	CGCG	1 cut(s)	217
MwoI	GCNNNNNNNGC	2 cut(s)	61, 284
NarI	GGCGCC	1 cut(s)	526
NciI	CCSGG	1 cut(s)	260
NdeI	CATATG	1 cut(s)	821
NdeII	GATC	7 cut(s)	247, 510, 734, 887, 1082, 1277, 1472
NheI	GCTAGC	3 cut(s)	899, 1289, 1484
NlaIII	CATG	6 cut(s)	342, 1344, 1450, 1584, 1667, 1715
NlaIV	GGNNCC	7 cut(s)	70, 375, 432, 442, 527, 817, 834
NsiI	ATGCAT	1 cut(s)	487
NspI	RCATGY	1 cut(s)	1584
PceI	AGGCCT	5 cut(s)	601, 1027, 1222, 1417, 1612
PfeI	GAWTC	2 cut(s)	349, 703
PflFI	GACNNNGTC	1 cut(s)	17
PfoI	TCCNGGA	3 cut(s)	1231, 1426, 1621
PinAI	ACCGGT	1 cut(s)	1690
PkrI	GCNGC	2 cut(s)	477, 1000
PleI	GAGTC	5 cut(s)	905, 1100, 1295, 1339, 1490
PluTI	GGCGCC	1 cut(s)	529
PpsI	GAGTC	5 cut(s)	905, 1100, 1295, 1339, 1490
Psp6I	CCWGG	6 cut(s)	169, 184, 376, 1231, 1426, 1621
PspGI	CCWGG	6 cut(s)	169, 184, 376, 1231, 1426, 1621
PspN4I	GGNNCC	7 cut(s)	70, 375, 432, 442, 527, 817, 834
PspPI	GGNCC	4 cut(s)	68, 101, 374, 816
PsyI	GACNNNGTC	1 cut(s)	17
PvuII	CAGCTG	1 cut(s)	475
RsaI	GTAC	3 cut(s)	152, 1254, 1585
RsaNI	GTAC	3 cut(s)	151, 1253, 1584
RseI	CAYNNNNRTG	1 cut(s)	1716
SalI	GTCGAC	2 cut(s)	908, 1103
SaqAI	TTAA	4 cut(s)	59, 240, 489, 639
SatI	GCNGC	2 cut(s)	476, 999
Sau3AI	GATC	7 cut(s)	247, 510, 734, 887, 1082, 1277, 1472
Sau96I	GGNCC	4 cut(s)	68, 101, 374, 816
SchI	GAGTC	5 cut(s)	905, 1100, 1295, 1340, 1490
ScrFI	CCNGG	7 cut(s)	171, 186, 260, 378, 1233, 1428, 1623
SduI	GDGCHC	4 cut(s)	185, 325, 433, 523
SfaNI	GCATC	2 cut(s)	384, 1679
SfcI	CTRYAG	3 cut(s)	1018, 1284, 1479
SfoI	GGCGCC	1 cut(s)	527
SinI	GGWCC	1 cut(s)	816
SmiMI	CAYNNNNRTG	1 cut(s)	1716
Sse9I	AATT	7 cut(s)	490, 558, 789, 984, 1179, 1374, 1569
SseBI	AGGCCT	5 cut(s)	601, 1027, 1222, 1417, 1612
SsiI	CCGC	4 cut(s)	128, 215, 245, 455
SspDI	GGCGCC	1 cut(s)	525
SspI	AATATT	1 cut(s)	589
SspMI	CTAG	6 cut(s)	744, 876, 900, 1095, 1290, 1485
StuI	AGGCCT	5 cut(s)	601, 1027, 1222, 1417, 1612
StyD4I	CCNGG	7 cut(s)	169, 184, 258, 376, 1231, 1426, 1621
StyI	CCWWGG	1 cut(s)	743
TaaI	ACNGT	2 cut(s)	34, 1137
TaqI	TCGA	6 cut(s)	890, 909, 1085, 1104, 1280, 1475
TaqII	GACCGA	1 cut(s)	1146
TasI	AATT	7 cut(s)	490, 558, 789, 984, 1179, 1374, 1569
TatI	WGTACW	2 cut(s)	1252, 1583
TfiI	GAWTC	2 cut(s)	349, 703
Tru1I	TTAA	4 cut(s)	59, 240, 489, 639
Tru9I	TTAA	4 cut(s)	59, 240, 489, 639
TscAI	CASTG	5 cut(s)	226, 985, 1180, 1375, 1570
TseI	GCWGC	2 cut(s)	475, 998
TspDTI	ATGAA	6 cut(s)	210, 939, 1134, 1329, 1700, 1701
TspRI	CASTG	5 cut(s)	226, 985, 1180, 1375, 1570
Tth111I	GACNNNGTC	1 cut(s)	17
VneI	GTGCAC	1 cut(s)	519
VpaK11BI	GGWCC	1 cut(s)	816
XagI	CCTNNNNNAGG	1 cut(s)	1021
XapI	RAATTY	5 cut(s)	558, 984, 1179, 1374, 1569
XceI	RCATGY	1 cut(s)	1584
XmaJI	CCTAGG	1 cut(s)	743
XmiI	GTMKAC	6 cut(s)	909, 1013, 1104, 1299, 1403, 1494
XspI	CTAG	6 cut(s)	744, 876, 900, 1095, 1290, 1485
Zsp2I	ATGCAT	1 cut(s)	487

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.