Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0004053

Physical Location & Seq

Genomic Coordinates Forward (+)

86245498 .. 86248326

Gene Structure 2829 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00148600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1716 bp

ATGCCGCTAATACTCGAACTAGAAGATGAAGAACCTCCAATGGTGGCCGCCAGCGACTTCACCCTTGCTGTCCAAAGTCCAACGTTGAAGAGGGAAGAACGCAAGCGCTTACAGCACGGCCCCCATTTCTCCGAATGGAAGGTTCTTGTTGCGCCTGGTGATTGGGAGGACTATTCAGCGGGCAAGGATGGAGCTGAAAGGTTCAGATCTCAAAACCTGCCTGGAAACGAGAGCCCAGGAGTGTATGAACTCGGAGTTGCAGTTCCGCACAGTGGTTCAGGCCGTGGGATTAAAGCGGATCAAATAGTCCCGGTTTATGCTGGACATACTGATAAGGTGAGGACAAGGCTTCAACAGTATGGCCGGACAGGGGCTCATTTGGGGAGGTCATGCTCAGGGAATCCGAGTGAGCGAATCTGTAAGGGGCCTGGATTTTTTGAGGAGACGCTGGAAAGAGGATACCCCATTGTGTGTAGATGGGCTCATATGGGAACCAAAAGTGAGGCGGAGAGAACAGAAAGTCAGCTGCTTCATGCATTTAATTATGCGTGGAACACAAGGATCAATGGTGCACGGCGCCCTGATGATGTCCTTCAGAAACTCAAGGAAATTTCCTCAAAACCTACCCGATTTATGTTAGTAGTCCCGAGGCCTCTACCTTCCAGACAGAAGCAAGTCGGTATTAGAATTTACTCCAGCAATCTGGTTTCAACAGAGGACAAGTTCAGTAACTATGCCGATAGGGAGAGCAGGAATCTCATACCCCAAGTTTTCAAGTTTGGTAGATCACAGCCTAGGTTAGTTTTGGATGGAAGTGACATTACTTGGGAAAACACTGAAATTTGTGGGGCACGTACAAATAATGGGTCTGCTTGTAGAAGGCCTCCAGTTCCAGGAAATAAGAGGTGTGCTGTACACAAAGGGATGTGGATTACTGGATCGACTACAGCTAGCAATGTAGACTCAAAATTCAGTTTTATCAGCAACAGAGAGTCTGTTTCATATAAAAGTGGCATTACTCAGGAGAACACTGAAATTTGTGGGGCACGTACAAATAATGGGTCTGCTTGTAGAAGGCCTCCAGTTTCAGGAAACAAGAGGTGTGCTGTACACAAAGGGATGTGGATTACTGGATCGACTACAGCTAGCAATGTAGACTCAAATTGCAGTTTTATCAGCAACAGAGAGTCTGTTTCATATAAAAGTGGCATCACTCAGGAGAACACTGAAATTTGTGGGGTGGCTGCAGCTGATGGGTCTACCTGTAGAAGGCCTCCAGTTCAAGGAAGACAGAGGTGTGCTGAACACAAAGGGATGAGGATTACTGGATCGATTACAGCTAGCAATGTCGGCTCAAAATGCAGTTTTATCAGCAACAGAGAGTCTGTTTCATATAGAAGTGGCATTACTCAGCAGAACACTGAAATTTGTGGGGTGGTTACAGGTAATGGATCTACTTGTAGAAGGCCTCCAGTTCCAGGAAGAGTGAGGTGTGCTGAACACAAAGGGATGAGGATTACTGGATCGACTACAGCTAGCAATGTAGACTCAAATTGCAGTTTTATTAGCAACAGAGAGTTTGCTTCTTATAAAAGTGGCATTACTTGGGAGAACACTGGAATTTGTGGGGCAACTACAAATAATGGGTCTGCTTGTAGAAGGCCTCCAGTTCAAGGAAGAAAGAGGTGTGCTGTACACAAAGGGAGGAGGATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0008150 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0010087 GO:0010089 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0048580 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051172 GO:0051239 GO:0051252 GO:0051253 GO:0060255 GO:0065007 GO:0080050 GO:0080090 GO:0097100 GO:0097159 GO:1901363 GO:1902679 GO:1903506 GO:1903507 GO:2000026 GO:2000033 GO:2000034 GO:2000112 GO:2000113 GO:2000241 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

571

Amino Acids

62.65

Weight (kDa)

9.6

Isoelectric Point (pI)

45.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GIY_YIG_domain	PF19239	43 - 198	1.1e-60	GIY-YIG domain-containing protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004053)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26170 AT5G56780
fragaria_vesca	FvH4_1g07150 FvH4_1g07151 FvH4_1g07151 FvH4_1g07231
malus_domestica	MD02G1075500.v1.1 MD02G1076000.v1.1
prunus_persica	Prupe.7G212600_v2.0.a1
pyrus_communis	pycom02g05960 pycom02g06030
rosa_chinensis	RchiOBHm_Chr2g0093031 RchiOBHm_Chr2g0093041
rosa_laevigata	RLG00000016361 RLG00000016362
rosa_multiflora	Rmu_co8308583.1_g000001 Rmu_sc0034350.1_g000001 Rmu_sc0039828.1_g000001
rosa_roxburghii	Rroxscaffold_2G00148580 Rroxscaffold_2G00148600
rosa_rugosa	Rorug02G0031500 Rorug02G0031500 Rorug02G0031600 Rorug02G0031700 Rorug02G0031800
rosa_samantha	Rh2AG077400 Rh2BG078800 Rh2CG081000 Rh2CG081100 Rh2DG076200 Rh2DG076300
rosa_wichuraiana	Rw0G010360 Rw2G006880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1590
Acc36I	ACCTGC	1 cut(s)	225
AccB1I	GGYRCC	1 cut(s)	576
AccI	GTMKAC	4 cut(s)	960, 1155, 1259, 1545
AciI	CCGC	6 cut(s)	5, 48, 179, 266, 296, 506
AclI	AACGTT	1 cut(s)	83
AclWI	GGATC	7 cut(s)	306, 569, 946, 1141, 1336, 1459, 1531
AcoI	YGGCCR	2 cut(s)	45, 361
AcsI	RAATTY	8 cut(s)	609, 687, 840, 968, 1035, 1230, 1425, 1620
AcuI	CTGAAG	1 cut(s)	578
AcyI	GRCGYC	1 cut(s)	577
AfaI	GTAC	5 cut(s)	856, 915, 1051, 1110, 1695
AfeI	AGCGCT	1 cut(s)	107
AfiI	CCNNNNNNNGG	8 cut(s)	272, 370, 893, 1088, 1269, 1283, 1478, 1673
AgsI	TTSAA	6 cut(s)	88, 353, 711, 775, 1283, 1673
AjnI	CCWGG	6 cut(s)	154, 220, 235, 427, 892, 1477
AloI	GAACNNNNNNTCC	2 cut(s)	246, 278
AluBI	AGCT	7 cut(s)	194, 526, 950, 1145, 1250, 1340, 1535
AluI	AGCT	7 cut(s)	194, 526, 950, 1145, 1250, 1340, 1535
Alw21I	GWGCWC	1 cut(s)	574
Alw26I	GTCTC	1 cut(s)	437
Alw44I	GTGCAC	1 cut(s)	570
AlwI	GGATC	7 cut(s)	306, 569, 946, 1141, 1336, 1459, 1531
Ama87I	CYCGRG	1 cut(s)	646
Aor51HI	AGCGCT	1 cut(s)	107
ApaLI	GTGCAC	1 cut(s)	570
ApeKI	GCWGC	3 cut(s)	526, 1244, 1247
ApoI	RAATTY	8 cut(s)	609, 687, 840, 968, 1035, 1230, 1425, 1620
ArsI	GACNNNNNNTTYG	6 cut(s)	851, 883, 1046, 1078, 1631, 1663
AspA2I	CCTAGG	1 cut(s)	794
AspLEI	GCGC	3 cut(s)	108, 154, 579
AspS9I	GGNCC	2 cut(s)	119, 425
AsuC2I	CCSGG	1 cut(s)	311
AsuHPI	GGTGA	3 cut(s)	52, 170, 349
AsuNHI	GCTAGC	4 cut(s)	950, 1145, 1340, 1535
AvaI	CYCGRG	1 cut(s)	646
AvrII	CCTAGG	1 cut(s)	794
BaeGI	GKGCMC	3 cut(s)	574, 853, 1048
BanI	GGYRCC	1 cut(s)	576
BanII	GRGCYC	3 cut(s)	236, 376, 484
BarI	GAAGNNNNNNTAC	4 cut(s)	805, 837, 1390, 1422
BbsI	GAAGAC	1 cut(s)	1294
Bbv12I	GWGCWC	1 cut(s)	574
BbvI	GCAGC	3 cut(s)	513, 1231, 1259
BccI	CCATC	4 cut(s)	182, 471, 803, 1247
BceAI	ACGGC	3 cut(s)	133, 267, 590
BciT130I	CCWGG	6 cut(s)	156, 222, 237, 429, 894, 1479
BciVI	GTATCC	1 cut(s)	452
BcnI	CCSGG	1 cut(s)	311
BcoDI	GTCTC	1 cut(s)	437
BfaI	CTAG	6 cut(s)	20, 795, 951, 1146, 1341, 1536
BfmI	CTRYAG	5 cut(s)	945, 1140, 1245, 1264, 1530
BfoI	RGCGCY	2 cut(s)	109, 580
BfuAI	ACCTGC	1 cut(s)	225
BfuI	GTATCC	1 cut(s)	452
BglII	AGATCT	1 cut(s)	206
BisI	GCNGC	5 cut(s)	5, 48, 527, 1245, 1248
BlnI	CCTAGG	1 cut(s)	794
BlsI	GCNGC	5 cut(s)	6, 49, 528, 1246, 1249
Bme1390I	CCNGG	7 cut(s)	156, 222, 237, 311, 429, 894, 1479
BmeT110I	CYCGRG	1 cut(s)	646
BmgT120I	GGNCC	2 cut(s)	119, 425
BmiI	GGNNCC	4 cut(s)	121, 426, 493, 578
BmrFI	CCNGG	7 cut(s)	156, 222, 237, 311, 429, 894, 1479
BmsI	GCATC	1 cut(s)	1218
BmtI	GCTAGC	4 cut(s)	954, 1149, 1344, 1539
BpiI	GAAGAC	1 cut(s)	1294
BpmI	CTGGAG	6 cut(s)	679, 870, 1065, 1260, 1455, 1650
Bpu10I	CCTNAGC	1 cut(s)	394
BpuEI	CTTGAG	1 cut(s)	587
BpuMI	CCSGG	1 cut(s)	311
Bsa29I	ATCGAT	1 cut(s)	1331
BsaAI	YACGTR	2 cut(s)	854, 1049
BsaHI	GRCGYC	1 cut(s)	577
BsaJI	CCNNGG	4 cut(s)	235, 283, 647, 794
BsaXI	ACNNNNNCTCC	2 cut(s)	246, 276
Bsc4I	CCNNNNNNNGG	8 cut(s)	272, 370, 893, 1088, 1269, 1283, 1478, 1673
Bse3DI	GCAATG	4 cut(s)	961, 1156, 1351, 1546
BseBI	CCWGG	6 cut(s)	156, 222, 237, 429, 894, 1479
BseCI	ATCGAT	1 cut(s)	1331
BseDI	CCNNGG	4 cut(s)	235, 283, 647, 794
BseGI	GGATG	6 cut(s)	193, 814, 930, 1125, 1320, 1515
BseLI	CCNNNNNNNGG	8 cut(s)	272, 370, 893, 1088, 1269, 1283, 1478, 1673
BseMI	GCAATG	4 cut(s)	961, 1156, 1351, 1546
BseMII	CTCAG	4 cut(s)	408, 1034, 1229, 1424
BseRI	GAGGAG	1 cut(s)	455
BseSI	GKGCMC	3 cut(s)	574, 853, 1048
BseXI	GCAGC	3 cut(s)	513, 1231, 1259
BshNI	GGYRCC	1 cut(s)	576
BshVI	ATCGAT	1 cut(s)	1331
BsiHKAI	GWGCWC	1 cut(s)	574
BsiHKCI	CYCGRG	1 cut(s)	646
BsiSI	CCGG	2 cut(s)	311, 364
BslFI	GGGAC	2 cut(s)	293, 629
BslI	CCNNNNNNNGG	8 cut(s)	272, 370, 893, 1088, 1269, 1283, 1478, 1673
BsmAI	GTCTC	1 cut(s)	437
BsmBI	CGTCTC	1 cut(s)	437
BsmFI	GGGAC	2 cut(s)	293, 629
BsoBI	CYCGRG	1 cut(s)	646
Bsp1286I	GDGCHC	6 cut(s)	236, 376, 484, 574, 853, 1048
Bsp1407I	TGTACA	3 cut(s)	913, 1108, 1693
Bsp143I	GATC	9 cut(s)	206, 298, 561, 785, 938, 1133, 1328, 1451, 1523
BspACI	CCGC	6 cut(s)	5, 48, 179, 266, 296, 506
BspCNI	CTCAG	4 cut(s)	407, 1033, 1228, 1423
BspDI	ATCGAT	1 cut(s)	1331
BspLI	GGNNCC	4 cut(s)	121, 426, 493, 578
BspMAI	CTGCAG	1 cut(s)	1249
BspMI	ACCTGC	1 cut(s)	225
BspOI	GCTAGC	4 cut(s)	954, 1149, 1344, 1539
BspPI	GGATC	7 cut(s)	306, 569, 946, 1141, 1336, 1459, 1531
BspT107I	GGYRCC	1 cut(s)	576
BsrDI	GCAATG	4 cut(s)	961, 1156, 1351, 1546
BsrGI	TGTACA	3 cut(s)	913, 1108, 1693
BssECI	CCNNGG	4 cut(s)	235, 283, 647, 794
BssMI	GATC	9 cut(s)	206, 298, 561, 785, 938, 1133, 1328, 1451, 1523
BssNI	GRCGYC	1 cut(s)	577
BssT1I	CCWWGG	1 cut(s)	794
Bst2UI	CCWGG	6 cut(s)	156, 222, 237, 429, 894, 1479
Bst4CI	ACNGT	2 cut(s)	272, 357
Bst6I	CTCTTC	2 cut(s)	83, 1477
BstACI	GRCGYC	1 cut(s)	577
BstAUI	TGTACA	3 cut(s)	913, 1108, 1693
BstBAI	YACGTR	2 cut(s)	854, 1049
BstC8I	GCNNGC	7 cut(s)	52, 104, 181, 952, 1147, 1342, 1537
BstDEI	CTNAG	4 cut(s)	394, 1020, 1215, 1410
BstDSI	CCRYGG	1 cut(s)	283
BstENI	CCTNNNNNAGG	1 cut(s)	1267
BstF5I	GGATG	6 cut(s)	193, 814, 930, 1125, 1320, 1515
BstH2I	RGCGCY	2 cut(s)	109, 580
BstHHI	GCGC	3 cut(s)	108, 154, 579
BstKTI	GATC	9 cut(s)	209, 301, 564, 788, 941, 1136, 1331, 1454, 1526
BstMAI	GTCTC	1 cut(s)	437
BstMBI	GATC	9 cut(s)	206, 298, 561, 785, 938, 1133, 1328, 1451, 1523
BstMWI	GCNNNNNNNGC	3 cut(s)	112, 1350, 1359
BstNI	CCWGG	6 cut(s)	156, 222, 237, 429, 894, 1479
BstSCI	CCNGG	7 cut(s)	154, 220, 235, 309, 427, 892, 1477
BstSFI	CTRYAG	5 cut(s)	945, 1140, 1245, 1264, 1530
BstSLI	GKGCMC	3 cut(s)	574, 853, 1048
BstV1I	GCAGC	3 cut(s)	513, 1231, 1259
BstV2I	GAAGAC	1 cut(s)	1294
BstX2I	RGATCY	2 cut(s)	206, 1451
BstXI	CCANNNNNNTGG	1 cut(s)	703
BstYI	RGATCY	2 cut(s)	206, 1451
Bsu15I	ATCGAT	1 cut(s)	1331
BsuI	GTATCC	1 cut(s)	452
BsuTUI	ATCGAT	1 cut(s)	1331
BtgI	CCRYGG	1 cut(s)	283
BtsCI	GGATG	6 cut(s)	193, 814, 930, 1125, 1320, 1515
BtsIMutI	CAGTG	6 cut(s)	277, 834, 1029, 1224, 1419, 1614
BveI	ACCTGC	1 cut(s)	225
Cac8I	GCNNGC	7 cut(s)	52, 104, 181, 952, 1147, 1342, 1537
CfoI	GCGC	3 cut(s)	108, 154, 579
Cfr13I	GGNCC	2 cut(s)	119, 425
ClaI	ATCGAT	1 cut(s)	1331
CseI	GACGC	1 cut(s)	454
Csp6I	GTAC	5 cut(s)	855, 914, 1050, 1109, 1694
CviAII	CATG	2 cut(s)	390, 533
CviQI	GTAC	5 cut(s)	855, 914, 1050, 1109, 1694
DdeI	CTNAG	4 cut(s)	394, 1020, 1215, 1410
DinI	GGCGCC	1 cut(s)	578
DpnI	GATC	9 cut(s)	208, 300, 563, 787, 940, 1135, 1330, 1453, 1525
DpnII	GATC	9 cut(s)	206, 298, 561, 785, 938, 1133, 1328, 1451, 1523
EaeI	YGGCCR	2 cut(s)	45, 361
Eam1104I	CTCTTC	2 cut(s)	83, 1477
EarI	CTCTTC	2 cut(s)	83, 1477
EciI	GGCGGA	1 cut(s)	521
Eco130I	CCWWGG	1 cut(s)	794
Eco147I	AGGCCT	6 cut(s)	652, 883, 1078, 1273, 1468, 1663
Eco24I	GRGCYC	3 cut(s)	236, 376, 484
Eco47III	AGCGCT	1 cut(s)	107
Eco57I	CTGAAG	1 cut(s)	578
Eco88I	CYCGRG	1 cut(s)	646
EcoNI	CCTNNNNNAGG	1 cut(s)	1267
EcoO109I	RGGNCCY	1 cut(s)	425
EcoRII	CCWGG	6 cut(s)	154, 220, 235, 427, 892, 1477
EcoT14I	CCWWGG	1 cut(s)	794
EcoT22I	ATGCAT	1 cut(s)	538
EcoT38I	GRGCYC	3 cut(s)	236, 376, 484
EgeI	GGCGCC	1 cut(s)	578
EheI	GGCGCC	1 cut(s)	578
ErhI	CCWWGG	1 cut(s)	794
Esp3I	CGTCTC	1 cut(s)	437
FaeI	CATG	2 cut(s)	393, 536
FaqI	GGGAC	2 cut(s)	293, 629
FatI	CATG	2 cut(s)	389, 532
FauI	CCCGC	1 cut(s)	172
FauNDI	CATATG	1 cut(s)	486
FblI	GTMKAC	4 cut(s)	960, 1155, 1259, 1545
Fnu4HI	GCNGC	5 cut(s)	5, 48, 527, 1245, 1248
FokI	GGATG	6 cut(s)	200, 821, 937, 1132, 1327, 1522
FriOI	GRGCYC	3 cut(s)	236, 376, 484
Fsp4HI	GCNGC	5 cut(s)	5, 48, 527, 1245, 1248
FspBI	CTAG	6 cut(s)	20, 795, 951, 1146, 1341, 1536
GlaI	GCGC	3 cut(s)	107, 153, 578
GluI	GCNGC	5 cut(s)	5, 48, 527, 1245, 1248
GsuI	CTGGAG	6 cut(s)	679, 870, 1065, 1260, 1455, 1650
HaeII	RGCGCY	2 cut(s)	109, 580
HapII	CCGG	2 cut(s)	311, 364
HgaI	GACGC	1 cut(s)	454
HhaI	GCGC	3 cut(s)	108, 154, 579
Hin1I	GRCGYC	1 cut(s)	577
Hin1II	CATG	2 cut(s)	393, 536
Hin6I	GCGC	3 cut(s)	106, 152, 577
HinP1I	GCGC	3 cut(s)	106, 152, 577
HinfI	GANTC	9 cut(s)	400, 414, 754, 962, 992, 1157, 1187, 1382, 1547
HpaII	CCGG	2 cut(s)	311, 364
HphI	GGTGA	3 cut(s)	52, 170, 349
Hpy166II	GTNNAC	8 cut(s)	572, 916, 961, 1111, 1156, 1260, 1546, 1696
Hpy188I	TCNGA	5 cut(s)	133, 206, 254, 405, 597
Hpy188III	TCNNGA	5 cut(s)	646, 663, 1022, 1089, 1217
Hpy8I	GTNNAC	8 cut(s)	572, 916, 961, 1111, 1156, 1260, 1546, 1696
HpyAV	CCTTC	8 cut(s)	133, 602, 669, 873, 1068, 1263, 1458, 1653
HpyCH4III	ACNGT	2 cut(s)	272, 357
HpyCH4IV	ACGT	3 cut(s)	83, 853, 1048
HpyCH4V	TGCA	7 cut(s)	260, 536, 572, 1167, 1247, 1362, 1557
HpyF10VI	GCNNNNNNNGC	3 cut(s)	112, 1350, 1359
HpyF3I	CTNAG	4 cut(s)	394, 1020, 1215, 1410
HpySE526I	ACGT	3 cut(s)	83, 853, 1048
Hsp92I	GRCGYC	1 cut(s)	577
Hsp92II	CATG	2 cut(s)	393, 536
HspAI	GCGC	3 cut(s)	106, 152, 577
KasI	GGCGCC	1 cut(s)	576
Kzo9I	GATC	9 cut(s)	206, 298, 561, 785, 938, 1133, 1328, 1451, 1523
LmnI	GCTCC	1 cut(s)	191
Lsp1109I	GCAGC	3 cut(s)	513, 1231, 1259
LweI	GCATC	1 cut(s)	1218
MaeI	CTAG	6 cut(s)	20, 795, 951, 1146, 1341, 1536
MaeII	ACGT	3 cut(s)	83, 853, 1048
MaeIII	GTNAC	3 cut(s)	728, 815, 1438
MalI	GATC	9 cut(s)	208, 300, 563, 787, 940, 1135, 1330, 1453, 1525
MboI	GATC	9 cut(s)	206, 298, 561, 785, 938, 1133, 1328, 1451, 1523
MboII	GAAGA	7 cut(s)	35, 41, 100, 107, 1299, 1494, 1689
MflI	RGATCY	2 cut(s)	206, 1451
MhlI	GDGCHC	6 cut(s)	236, 376, 484, 574, 853, 1048
Mly113I	GGCGCC	1 cut(s)	577
MlyI	GAGTC	6 cut(s)	956, 1001, 1151, 1196, 1391, 1541
MmeI	TCCRAC	1 cut(s)	104
Mph1103I	ATGCAT	1 cut(s)	538
MseI	TTAA	3 cut(s)	291, 540, 1714
MspA1I	CMGCKG	3 cut(s)	179, 526, 1250
MspI	CCGG	2 cut(s)	311, 364
MspR9I	CCNGG	7 cut(s)	156, 222, 237, 311, 429, 894, 1479
MvaI	CCWGG	6 cut(s)	156, 222, 237, 429, 894, 1479
MwoI	GCNNNNNNNGC	3 cut(s)	112, 1350, 1359
NarI	GGCGCC	1 cut(s)	577
NciI	CCSGG	1 cut(s)	311
NdeI	CATATG	1 cut(s)	486
NdeII	GATC	9 cut(s)	206, 298, 561, 785, 938, 1133, 1328, 1451, 1523
NheI	GCTAGC	4 cut(s)	950, 1145, 1340, 1535
NlaIII	CATG	2 cut(s)	393, 536
NlaIV	GGNNCC	4 cut(s)	121, 426, 493, 578
NmuCI	GTSAC	1 cut(s)	815
NsiI	ATGCAT	1 cut(s)	538
PceI	AGGCCT	6 cut(s)	652, 883, 1078, 1273, 1468, 1663
PfeI	GAWTC	3 cut(s)	400, 414, 754
PfoI	TCCNGGA	2 cut(s)	892, 1477
PkrI	GCNGC	5 cut(s)	6, 49, 528, 1246, 1249
PleI	GAGTC	6 cut(s)	956, 1000, 1151, 1195, 1390, 1541
PluTI	GGCGCC	1 cut(s)	580
PpsI	GAGTC	6 cut(s)	956, 1000, 1151, 1195, 1390, 1541
Ppu21I	YACGTR	2 cut(s)	854, 1049
PsiI	TTATAA	1 cut(s)	1590
Psp1406I	AACGTT	1 cut(s)	83
Psp6I	CCWGG	6 cut(s)	154, 220, 235, 427, 892, 1477
PspGI	CCWGG	6 cut(s)	154, 220, 235, 427, 892, 1477
PspN4I	GGNNCC	4 cut(s)	121, 426, 493, 578
PspPI	GGNCC	2 cut(s)	119, 425
PstI	CTGCAG	1 cut(s)	1249
PsuI	RGATCY	2 cut(s)	206, 1451
PvuII	CAGCTG	2 cut(s)	526, 1250
RsaI	GTAC	5 cut(s)	856, 915, 1051, 1110, 1695
RsaNI	GTAC	5 cut(s)	855, 914, 1050, 1109, 1694
SaqAI	TTAA	3 cut(s)	291, 540, 1714
SatI	GCNGC	5 cut(s)	5, 48, 527, 1245, 1248
Sau3AI	GATC	9 cut(s)	206, 298, 561, 785, 938, 1133, 1328, 1451, 1523
Sau96I	GGNCC	2 cut(s)	119, 425
SchI	GAGTC	6 cut(s)	956, 1001, 1151, 1196, 1391, 1541
ScrFI	CCNGG	7 cut(s)	156, 222, 237, 311, 429, 894, 1479
SduI	GDGCHC	6 cut(s)	236, 376, 484, 574, 853, 1048
SfaNI	GCATC	1 cut(s)	1218
SfcI	CTRYAG	5 cut(s)	945, 1140, 1245, 1264, 1530
SfoI	GGCGCC	1 cut(s)	578
SmlI	CTYRAG	1 cut(s)	602
SmoI	CTYRAG	1 cut(s)	602
SseBI	AGGCCT	6 cut(s)	652, 883, 1078, 1273, 1468, 1663
SsiI	CCGC	6 cut(s)	5, 48, 179, 266, 296, 506
SspDI	GGCGCC	1 cut(s)	576
SspMI	CTAG	6 cut(s)	20, 795, 951, 1146, 1341, 1536
StuI	AGGCCT	6 cut(s)	652, 883, 1078, 1273, 1468, 1663
StyD4I	CCNGG	7 cut(s)	154, 220, 235, 309, 427, 892, 1477
StyI	CCWWGG	1 cut(s)	794
TaaI	ACNGT	2 cut(s)	272, 357
TaiI	ACGT	3 cut(s)	86, 856, 1051
TaqI	TCGA	5 cut(s)	15, 941, 1136, 1331, 1526
TatI	WGTACW	3 cut(s)	913, 1108, 1693
TauI	GCSGC	2 cut(s)	7, 50
TfiI	GAWTC	3 cut(s)	400, 414, 754
Tru1I	TTAA	3 cut(s)	291, 540, 1714
Tru9I	TTAA	3 cut(s)	291, 540, 1714
TscAI	CASTG	6 cut(s)	277, 841, 1036, 1231, 1426, 1621
TseFI	GTSAC	1 cut(s)	815
TseI	GCWGC	3 cut(s)	526, 1244, 1247
Tsp45I	GTSAC	1 cut(s)	815
TspDTI	ATGAA	6 cut(s)	42, 261, 521, 990, 1185, 1380
TspRI	CASTG	6 cut(s)	277, 841, 1036, 1231, 1426, 1621
VneI	GTGCAC	1 cut(s)	570
XagI	CCTNNNNNAGG	1 cut(s)	1267
XapI	RAATTY	8 cut(s)	609, 687, 840, 968, 1035, 1230, 1425, 1620
XmaJI	CCTAGG	1 cut(s)	794
XmiI	GTMKAC	4 cut(s)	960, 1155, 1259, 1545
XspI	CTAG	6 cut(s)	20, 795, 951, 1146, 1341, 1536
Zsp2I	ATGCAT	1 cut(s)	538

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.