Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0004053

Physical Location & Seq

Genomic Coordinates Reverse (-)

6602754 .. 6604996

Gene Structure 2243 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG081100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1398 bp

ATGGTAGCCAGCGACTTAACCGTTGCTCTCCAAAGGTTGAAGAGGGAAGAATGCAAGCGCACAAAGCACGACCCCCATTTCTCCAACTGGAAGGTTCTTGTTGGGCCCTGTGATTGGGAGGACTTTTCGGTGGGGAAGGAAGGAACTGAAAGGTACAGAGTACATAACCTGCCTAGGAACGAGAGCCCAGGAGTGTATGAACTTGGGGTTGCTGCTGTTTTGCGCAGTGGTTTAGGCCGTGGGATTGAAGCGGATAAAATAGTCCCGGTTTATCTTGGACAGGCTGATAGTGTGAGGACCAGGCTCCAGCAGTATGGCCGGACAGGGGCTCATTTGGGCAAGTGCTGCTCAGTTGGGATTCCGAGCGAGCGAATCCGAAAGGGGCCTGGATTGTTTGAGCAGATCCTGGCAAGAGGCTACCCCATTGTGTATAGATGGGCTCCTATGGGAACCAAAAGTCAGGCCCTGAAAACAGAAAGTCAGCTGCTTAACACATTTGATTATGCATGGAACACAAGCATCAATGGTGCACGGCGCCCTGATGATGTCCTTCAGAAACTCAAGAAAACTTCCTCAAAACCTACCCGATTTACTAATATTGTCCAGCGGCTTCTACCTTTCAGACAGAAGCAAGTCGGTATTAGAATTAACTCCAGCAAACTGGTTTCAACAGAGGACAAGTTCAGTGACTATGCTGATAGGCAGAGCCGGACTCTCACAGCCCAGGTTTTCAAGTTTGGCAGATCACAGCCTAGGTTAGTTTTGGATAGAAGTGGGATTACTCAGGAAAATACTATAATTTGTGGGGTGGCTGTAGGTGATGGGTCCATCTGTAGAAAGGAACCAGTTCAAGGAAGAAAGAGGTGTGCTGAACACAAAGGGATGAGGATTACAGGGTTGATTACAGTTAGGATATCAAATAGCAATATTGATTCAAAATGCAGTGTTATCAGCAACAGAGAATTTGTTTCCGATGAAAGTGGCATTACTCAGGAGAACACTGAAATTTGTGGGTTGGCTGCGGGTGATGGATCTATATGTAGAACACCGCCAGTTCAAGGAAGAAAGAGGTGTGCTGAGCACAGAGGGATGAGGATTAAAGGGTCAATTACAGTTAGGATATCAGATAAGAATGTGGACTCAAAGTGCAGTGTTCTCAACAACACAGAGCTAGATAGTCATGATGCATCAAATGTGAAATATGAACCGGTACAGCTTCCACCAGTTCATGTTTGTGAGAGCTCTACATCGATATGTGGATTCATCTTGGCCGATGGCTCTCCTTGTAGAACAGAACCAATTCAAGGAAGAAAAAGGTGTGATGAGCACAAAGGGAGAAGGATTCAGAAATGCAAATCCAAGTCAGTGAAAGAAGAGAAGGTCAAAATATGTGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0008150 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0010087 GO:0010089 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0048580 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051172 GO:0051239 GO:0051252 GO:0051253 GO:0060255 GO:0065007 GO:0080050 GO:0080090 GO:0097100 GO:0097159 GO:1901363 GO:1902679 GO:1903506 GO:1903507 GO:2000026 GO:2000033 GO:2000034 GO:2000112 GO:2000113 GO:2000241 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

465

Amino Acids

51.76

Weight (kDa)

9.6

Isoelectric Point (pI)

40.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GIY_YIG_domain	PF19239	27 - 184	6e-69	GIY-YIG domain-containing protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004053)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26170 AT5G56780
fragaria_vesca	FvH4_1g07150 FvH4_1g07151 FvH4_1g07151 FvH4_1g07231
malus_domestica	MD02G1075500.v1.1 MD02G1076000.v1.1
prunus_persica	Prupe.7G212600_v2.0.a1
pyrus_communis	pycom02g05960 pycom02g06030
rosa_chinensis	RchiOBHm_Chr2g0093031 RchiOBHm_Chr2g0093041
rosa_laevigata	RLG00000016361 RLG00000016362
rosa_multiflora	Rmu_co8308583.1_g000001 Rmu_sc0034350.1_g000001 Rmu_sc0039828.1_g000001
rosa_roxburghii	Rroxscaffold_2G00148580 Rroxscaffold_2G00148600
rosa_rugosa	Rorug02G0031500 Rorug02G0031500 Rorug02G0031600 Rorug02G0031700 Rorug02G0031800
rosa_samantha	Rh2AG077400 Rh2BG078800 Rh2CG081000 Rh2CG081100 Rh2DG076200 Rh2DG076300
rosa_wichuraiana	Rw0G010360 Rw2G006880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	224
Acc36I	ACCTGC	1 cut(s)	177
AccB1I	GGYRCC	1 cut(s)	534
AciI	CCGC	4 cut(s)	251, 607, 1022, 1049
AclWI	GGATC	2 cut(s)	397, 1039
AcoI	YGGCCR	2 cut(s)	316, 1269
AcsI	RAATTY	2 cut(s)	962, 1005
AcuI	CTGAAG	1 cut(s)	536
AcyI	GRCGYC	1 cut(s)	535
AfaI	GTAC	3 cut(s)	155, 162, 1212
AfiI	CCNNNNNNNGG	5 cut(s)	114, 325, 851, 1058, 1304
AgeI	ACCGGT	1 cut(s)	1207
AgsI	TTSAA	8 cut(s)	40, 248, 669, 733, 851, 936, 1058, 1304
AjnI	CCWGG	5 cut(s)	187, 299, 385, 405, 723
AluBI	AGCT	4 cut(s)	484, 1171, 1216, 1242
AluI	AGCT	4 cut(s)	484, 1171, 1216, 1242
Alw21I	GWGCWC	4 cut(s)	532, 1083, 1244, 1329
Alw44I	GTGCAC	1 cut(s)	528
AlwI	GGATC	2 cut(s)	397, 1039
AlwNI	CAGNNNCTG	2 cut(s)	406, 466
AoxI	GGCC	6 cut(s)	104, 235, 316, 383, 462, 1269
ApaI	GGGCCC	1 cut(s)	108
ApaLI	GTGCAC	1 cut(s)	528
ApeKI	GCWGC	4 cut(s)	212, 345, 484, 1019
ApoI	RAATTY	2 cut(s)	962, 1005
AsiGI	ACCGGT	1 cut(s)	1207
Asp700I	GAANNNNTTC	2 cut(s)	846, 1299
AspA2I	CCTAGG	2 cut(s)	173, 752
AspLEI	GCGC	3 cut(s)	60, 225, 537
AspS9I	GGNCC	6 cut(s)	104, 105, 297, 383, 463, 825
AsuC2I	CCSGG	1 cut(s)	266
AsuHPI	GGTGA	2 cut(s)	830, 1037
AvaII	GGWCC	2 cut(s)	297, 825
AvrII	CCTAGG	2 cut(s)	173, 752
BaeGI	GKGCMC	2 cut(s)	108, 532
BanI	GGYRCC	1 cut(s)	534
BanII	GRGCYC	5 cut(s)	108, 188, 331, 442, 1244
BarI	GAAGNNNNNNTAC	2 cut(s)	763, 795
Bbv12I	GWGCWC	4 cut(s)	532, 1083, 1244, 1329
BbvI	GCAGC	4 cut(s)	199, 332, 471, 1006
BccI	CCATC	5 cut(s)	429, 815, 836, 1022, 1268
BceAI	ACGGC	2 cut(s)	222, 548
BciT130I	CCWGG	5 cut(s)	189, 301, 387, 407, 725
BcnI	CCSGG	1 cut(s)	266
BfaI	CTAG	3 cut(s)	174, 753, 1172
BfmI	CTRYAG	2 cut(s)	813, 832
BfoI	RGCGCY	1 cut(s)	538
BfuAI	ACCTGC	1 cut(s)	177
BisI	GCNGC	5 cut(s)	213, 346, 485, 608, 1020
BlnI	CCTAGG	2 cut(s)	173, 752
BlpI	GCTNAGC	1 cut(s)	1077
BlsI	GCNGC	5 cut(s)	214, 347, 486, 609, 1021
Bme1390I	CCNGG	6 cut(s)	189, 266, 301, 387, 407, 725
Bme18I	GGWCC	2 cut(s)	297, 825
BmgT120I	GGNCC	6 cut(s)	104, 105, 297, 383, 463, 825
BmiI	GGNNCC	8 cut(s)	106, 305, 384, 441, 451, 536, 826, 843
BmrFI	CCNGG	6 cut(s)	189, 266, 301, 387, 407, 725
BmsI	GCATC	3 cut(s)	528, 1174, 1196
BplI	GAGNNNNNCTC	2 cut(s)	697, 729
BpmI	CTGGAG	2 cut(s)	290, 637
Bpu1102I	GCTNAGC	1 cut(s)	1077
BpuEI	CTTGAG	1 cut(s)	545
BpuMI	CCSGG	1 cut(s)	266
Bsa29I	ATCGAT	1 cut(s)	1250
BsaHI	GRCGYC	1 cut(s)	535
BsaJI	CCNNGG	5 cut(s)	173, 187, 238, 723, 752
BsaWI	WCCGGW	1 cut(s)	1207
Bsc4I	CCNNNNNNNGG	5 cut(s)	114, 325, 851, 1058, 1304
Bse118I	RCCGGY	1 cut(s)	1207
Bse1I	ACTGG	5 cut(s)	92, 666, 845, 1052, 1223
BseBI	CCWGG	5 cut(s)	189, 301, 387, 407, 725
BseCI	ATCGAT	1 cut(s)	1250
BseDI	CCNNGG	5 cut(s)	173, 187, 238, 723, 752
BseGI	GGATG	2 cut(s)	888, 1095
BseLI	CCNNNNNNNGG	5 cut(s)	114, 325, 851, 1058, 1304
BseMII	CTCAG	4 cut(s)	363, 797, 1004, 1068
BseNI	ACTGG	5 cut(s)	92, 666, 845, 1052, 1223
BseSI	GKGCMC	2 cut(s)	108, 532
BseXI	GCAGC	4 cut(s)	199, 332, 471, 1006
BsgI	GTGCAG	1 cut(s)	1168
BshFI	GGCC	6 cut(s)	106, 237, 318, 385, 464, 1271
BshNI	GGYRCC	1 cut(s)	534
BshTI	ACCGGT	1 cut(s)	1207
BshVI	ATCGAT	1 cut(s)	1250
BsiHKAI	GWGCWC	4 cut(s)	532, 1083, 1244, 1329
BsiSI	CCGG	4 cut(s)	266, 319, 709, 1208
BslFI	GGGAC	1 cut(s)	248
BslI	CCNNNNNNNGG	5 cut(s)	114, 325, 851, 1058, 1304
BsmFI	GGGAC	1 cut(s)	248
BsmI	GAATGC	1 cut(s)	56
BsnI	GGCC	6 cut(s)	106, 237, 318, 385, 464, 1271
Bsp120I	GGGCCC	1 cut(s)	104
Bsp1286I	GDGCHC	8 cut(s)	108, 188, 331, 442, 532, 1083, 1244, 1329
Bsp143I	GATC	3 cut(s)	402, 743, 1031
Bsp1720I	GCTNAGC	1 cut(s)	1077
BspACI	CCGC	4 cut(s)	251, 607, 1022, 1049
BspANI	GGCC	6 cut(s)	106, 237, 318, 385, 464, 1271
BspCNI	CTCAG	4 cut(s)	362, 796, 1003, 1069
BspDI	ATCGAT	1 cut(s)	1250
BspHI	TCATGA	1 cut(s)	1180
BspLI	GGNNCC	8 cut(s)	106, 305, 384, 441, 451, 536, 826, 843
BspMI	ACCTGC	1 cut(s)	177
BspPI	GGATC	2 cut(s)	397, 1039
BspT107I	GGYRCC	1 cut(s)	534
BsrFI	RCCGGY	1 cut(s)	1207
BsrI	ACTGG	5 cut(s)	92, 666, 845, 1052, 1223
BssAI	RCCGGY	1 cut(s)	1207
BssECI	CCNNGG	5 cut(s)	173, 187, 238, 723, 752
BssMI	GATC	3 cut(s)	402, 743, 1031
BssNI	GRCGYC	1 cut(s)	535
BssT1I	CCWWGG	2 cut(s)	173, 752
Bst2UI	CCWGG	5 cut(s)	189, 301, 387, 407, 725
Bst4CI	ACNGT	3 cut(s)	22, 907, 1114
Bst6I	CTCTTC	2 cut(s)	35, 1368
BstACI	GRCGYC	1 cut(s)	535
BstAPI	GCANNNNNTGC	1 cut(s)	345
BstC8I	GCNNGC	3 cut(s)	10, 56, 368
BstDEI	CTNAG	4 cut(s)	349, 783, 990, 1077
BstDSI	CCRYGG	1 cut(s)	238
BstF5I	GGATG	2 cut(s)	888, 1095
BstH2I	RGCGCY	1 cut(s)	538
BstHHI	GCGC	3 cut(s)	60, 225, 537
BstKTI	GATC	3 cut(s)	405, 746, 1034
BstMBI	GATC	3 cut(s)	402, 743, 1031
BstMWI	GCNNNNNNNGC	2 cut(s)	64, 345
BstNI	CCWGG	5 cut(s)	189, 301, 387, 407, 725
BstSCI	CCNGG	6 cut(s)	187, 264, 299, 385, 405, 723
BstSFI	CTRYAG	2 cut(s)	813, 832
BstSLI	GKGCMC	2 cut(s)	108, 532
BstV1I	GCAGC	4 cut(s)	199, 332, 471, 1006
BstX2I	RGATCY	2 cut(s)	402, 1031
BstXI	CCANNNNNNTGG	2 cut(s)	314, 661
BstYI	RGATCY	2 cut(s)	402, 1031
Bsu15I	ATCGAT	1 cut(s)	1250
BsuRI	GGCC	6 cut(s)	106, 237, 318, 385, 464, 1271
BsuTUI	ATCGAT	1 cut(s)	1250
BtgI	CCRYGG	1 cut(s)	238
BtsCI	GGATG	2 cut(s)	888, 1095
BtsI	GCAGTG	3 cut(s)	232, 949, 1156
BtsIMutI	CAGTG	6 cut(s)	232, 691, 949, 999, 1156, 1371
BveI	ACCTGC	1 cut(s)	177
Cac8I	GCNNGC	3 cut(s)	10, 56, 368
CaiI	CAGNNNCTG	2 cut(s)	406, 466
CciI	TCATGA	1 cut(s)	1180
CfoI	GCGC	3 cut(s)	60, 225, 537
Cfr10I	RCCGGY	1 cut(s)	1207
Cfr13I	GGNCC	6 cut(s)	104, 105, 297, 383, 463, 825
ClaI	ATCGAT	1 cut(s)	1250
Csp6I	GTAC	3 cut(s)	154, 161, 1211
CspAI	ACCGGT	1 cut(s)	1207
CviAII	CATG	4 cut(s)	507, 1181, 1229, 1395
CviQI	GTAC	3 cut(s)	154, 161, 1211
DdeI	CTNAG	4 cut(s)	349, 783, 990, 1077
DinI	GGCGCC	1 cut(s)	536
DpnI	GATC	3 cut(s)	404, 745, 1033
DpnII	GATC	3 cut(s)	402, 743, 1031
EaeI	YGGCCR	2 cut(s)	316, 1269
Eam1104I	CTCTTC	2 cut(s)	35, 1368
EarI	CTCTTC	2 cut(s)	35, 1368
Ecl136II	GAGCTC	1 cut(s)	1242
Eco130I	CCWWGG	2 cut(s)	173, 752
Eco24I	GRGCYC	5 cut(s)	108, 188, 331, 442, 1244
Eco32I	GATATC	2 cut(s)	915, 1122
Eco47I	GGWCC	2 cut(s)	297, 825
Eco53kI	GAGCTC	1 cut(s)	1242
Eco57I	CTGAAG	1 cut(s)	536
EcoICRI	GAGCTC	1 cut(s)	1242
EcoO109I	RGGNCCY	3 cut(s)	105, 383, 463
EcoRII	CCWGG	5 cut(s)	187, 299, 385, 405, 723
EcoRV	GATATC	2 cut(s)	915, 1122
EcoT14I	CCWWGG	2 cut(s)	173, 752
EcoT22I	ATGCAT	2 cut(s)	508, 1189
EcoT38I	GRGCYC	5 cut(s)	108, 188, 331, 442, 1244
EgeI	GGCGCC	1 cut(s)	536
EheI	GGCGCC	1 cut(s)	536
ErhI	CCWWGG	2 cut(s)	173, 752
FaeI	CATG	4 cut(s)	510, 1184, 1232, 1398
FaqI	GGGAC	1 cut(s)	248
FatI	CATG	4 cut(s)	506, 1180, 1228, 1394
FauI	CCCGC	1 cut(s)	1015
Fnu4HI	GCNGC	5 cut(s)	213, 346, 485, 608, 1020
FokI	GGATG	2 cut(s)	895, 1102
FriOI	GRGCYC	5 cut(s)	108, 188, 331, 442, 1244
Fsp4HI	GCNGC	5 cut(s)	213, 346, 485, 608, 1020
FspBI	CTAG	3 cut(s)	174, 753, 1172
FspI	TGCGCA	1 cut(s)	224
GlaI	GCGC	3 cut(s)	59, 224, 536
GluI	GCNGC	5 cut(s)	213, 346, 485, 608, 1020
GsuI	CTGGAG	2 cut(s)	290, 637
HaeII	RGCGCY	1 cut(s)	538
HaeIII	GGCC	6 cut(s)	106, 237, 318, 385, 464, 1271
HapII	CCGG	4 cut(s)	266, 319, 709, 1208
HhaI	GCGC	3 cut(s)	60, 225, 537
Hin1I	GRCGYC	1 cut(s)	535
Hin1II	CATG	4 cut(s)	510, 1184, 1232, 1398
Hin6I	GCGC	3 cut(s)	58, 223, 535
HinP1I	GCGC	3 cut(s)	58, 223, 535
HinfI	GANTC	7 cut(s)	358, 372, 712, 932, 1139, 1260, 1342
HpaII	CCGG	4 cut(s)	266, 319, 709, 1208
HphI	GGTGA	2 cut(s)	830, 1037
Hpy166II	GTNNAC	2 cut(s)	530, 1138
Hpy188I	TCNGA	7 cut(s)	363, 377, 555, 623, 973, 1126, 1347
Hpy188III	TCNNGA	4 cut(s)	562, 785, 992, 1181
Hpy8I	GTNNAC	2 cut(s)	530, 1138
HpyAV	CCTTC	6 cut(s)	85, 130, 134, 560, 1332, 1372
HpyCH4III	ACNGT	3 cut(s)	22, 907, 1114
HpyCH4V	TGCA	8 cut(s)	54, 506, 530, 942, 1149, 1187, 1353, 1394
HpyF10VI	GCNNNNNNNGC	2 cut(s)	64, 345
HpyF3I	CTNAG	4 cut(s)	349, 783, 990, 1077
Hsp92I	GRCGYC	1 cut(s)	535
Hsp92II	CATG	4 cut(s)	510, 1184, 1232, 1398
HspAI	GCGC	3 cut(s)	58, 223, 535
KasI	GGCGCC	1 cut(s)	534
Kzo9I	GATC	3 cut(s)	402, 743, 1031
LmnI	GCTCC	2 cut(s)	309, 445
Lsp1109I	GCAGC	4 cut(s)	199, 332, 471, 1006
LweI	GCATC	3 cut(s)	528, 1174, 1196
MaeI	CTAG	3 cut(s)	174, 753, 1172
MaeIII	GTNAC	1 cut(s)	686
MalI	GATC	3 cut(s)	404, 745, 1033
MboI	GATC	3 cut(s)	402, 743, 1031
MboII	GAAGA	6 cut(s)	52, 59, 867, 1074, 1320, 1385
MflI	RGATCY	2 cut(s)	402, 1031
MhlI	GDGCHC	8 cut(s)	108, 188, 331, 442, 532, 1083, 1244, 1329
MluCI	AATT	6 cut(s)	645, 798, 962, 1005, 1107, 1299
Mly113I	GGCGCC	1 cut(s)	535
MlyI	GAGTC	2 cut(s)	706, 1133
MmeI	TCCRAC	1 cut(s)	108
Mph1103I	ATGCAT	2 cut(s)	508, 1189
MroXI	GAANNNNTTC	2 cut(s)	846, 1299
MseI	TTAA	4 cut(s)	17, 489, 648, 1098
MslI	CAYNNNNRTG	2 cut(s)	1233, 1252
MspA1I	CMGCKG	2 cut(s)	484, 607
MspI	CCGG	4 cut(s)	266, 319, 709, 1208
MspR9I	CCNGG	6 cut(s)	189, 266, 301, 387, 407, 725
Mva1269I	GAATGC	1 cut(s)	56
MvaI	CCWGG	5 cut(s)	189, 301, 387, 407, 725
MwoI	GCNNNNNNNGC	2 cut(s)	64, 345
NarI	GGCGCC	1 cut(s)	535
NciI	CCSGG	1 cut(s)	266
NdeII	GATC	3 cut(s)	402, 743, 1031
NlaIII	CATG	4 cut(s)	510, 1184, 1232, 1398
NlaIV	GGNNCC	8 cut(s)	106, 305, 384, 441, 451, 536, 826, 843
NmuCI	GTSAC	1 cut(s)	686
NsbI	TGCGCA	1 cut(s)	224
NsiI	ATGCAT	2 cut(s)	508, 1189
PagI	TCATGA	1 cut(s)	1180
PctI	GAATGC	1 cut(s)	56
PdmI	GAANNNNTTC	2 cut(s)	846, 1299
PfeI	GAWTC	5 cut(s)	358, 372, 932, 1260, 1342
PinAI	ACCGGT	1 cut(s)	1207
PkrI	GCNGC	5 cut(s)	214, 347, 486, 609, 1021
PleI	GAGTC	2 cut(s)	706, 1133
PluTI	GGCGCC	1 cut(s)	538
PpsI	GAGTC	2 cut(s)	706, 1133
Psp124BI	GAGCTC	1 cut(s)	1244
Psp6I	CCWGG	5 cut(s)	187, 299, 385, 405, 723
PspGI	CCWGG	5 cut(s)	187, 299, 385, 405, 723
PspN4I	GGNNCC	8 cut(s)	106, 305, 384, 441, 451, 536, 826, 843
PspOMI	GGGCCC	1 cut(s)	104
PspPI	GGNCC	6 cut(s)	104, 105, 297, 383, 463, 825
PstNI	CAGNNNCTG	2 cut(s)	406, 466
PsuI	RGATCY	2 cut(s)	402, 1031
PvuII	CAGCTG	1 cut(s)	484
RsaI	GTAC	3 cut(s)	155, 162, 1212
RsaNI	GTAC	3 cut(s)	154, 161, 1211
RseI	CAYNNNNRTG	2 cut(s)	1233, 1252
SacI	GAGCTC	1 cut(s)	1244
SaqAI	TTAA	4 cut(s)	17, 489, 648, 1098
SatI	GCNGC	5 cut(s)	213, 346, 485, 608, 1020
Sau3AI	GATC	3 cut(s)	402, 743, 1031
Sau96I	GGNCC	6 cut(s)	104, 105, 297, 383, 463, 825
SchI	GAGTC	2 cut(s)	706, 1133
ScrFI	CCNGG	6 cut(s)	189, 266, 301, 387, 407, 725
SduI	GDGCHC	8 cut(s)	108, 188, 331, 442, 532, 1083, 1244, 1329
SfaNI	GCATC	3 cut(s)	528, 1174, 1196
SfcI	CTRYAG	2 cut(s)	813, 832
SfoI	GGCGCC	1 cut(s)	536
SinI	GGWCC	2 cut(s)	297, 825
SmiMI	CAYNNNNRTG	2 cut(s)	1233, 1252
SmlI	CTYRAG	1 cut(s)	560
SmoI	CTYRAG	1 cut(s)	560
Sse9I	AATT	6 cut(s)	645, 798, 962, 1005, 1107, 1299
SsiI	CCGC	4 cut(s)	251, 607, 1022, 1049
SspDI	GGCGCC	1 cut(s)	534
SspI	AATATT	2 cut(s)	598, 928
SspMI	CTAG	3 cut(s)	174, 753, 1172
SstI	GAGCTC	1 cut(s)	1244
StyD4I	CCNGG	6 cut(s)	187, 264, 299, 385, 405, 723
StyI	CCWWGG	2 cut(s)	173, 752
TaaI	ACNGT	3 cut(s)	22, 907, 1114
TaqI	TCGA	1 cut(s)	1250
TasI	AATT	6 cut(s)	645, 798, 962, 1005, 1107, 1299
TatI	WGTACW	1 cut(s)	160
TauI	GCSGC	1 cut(s)	610
TfiI	GAWTC	5 cut(s)	358, 372, 932, 1260, 1342
Tru1I	TTAA	4 cut(s)	17, 489, 648, 1098
Tru9I	TTAA	4 cut(s)	17, 489, 648, 1098
TscAI	CASTG	6 cut(s)	232, 691, 949, 1006, 1156, 1371
TseFI	GTSAC	1 cut(s)	686
TseI	GCWGC	4 cut(s)	212, 345, 484, 1019
Tsp45I	GTSAC	1 cut(s)	686
TspDTI	ATGAA	5 cut(s)	213, 990, 1217, 1218, 1252
TspRI	CASTG	6 cut(s)	232, 691, 949, 1006, 1156, 1371
VneI	GTGCAC	1 cut(s)	528
VpaK11BI	GGWCC	2 cut(s)	297, 825
XapI	RAATTY	2 cut(s)	962, 1005
XmaJI	CCTAGG	2 cut(s)	173, 752
XmnI	GAANNNNTTC	2 cut(s)	846, 1299
XspI	CTAG	3 cut(s)	174, 753, 1172
Zsp2I	ATGCAT	2 cut(s)	508, 1189

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.