Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00436

Orthogroup ID

OG0004053

Physical Location & Seq

Genomic Coordinates Forward (+)

7337 .. 9580

Gene Structure 2244 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G010360.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1392 bp

ATGGTATCCAGCGACTTAACCGTTGCTCTCCAAAGGTTGAAGAGGGAAGAATGCAAGCGCACAAAGCACGACCCCCATTTCTCCAATTGGAAGGTTCTTGTTGGGCCCTGTGATTGGGAGGACTTTTCGGTGGGGAAGGAAGGAGCTGAAAGGTACAGAGTACATAACCTGCCTAGGAACGAGAGCCCAGGAGTGTATGAACTCGGAGTTGCTGTTTTGCGCAGTGGTTCAGGCCGTGGGATTGAAGCCGATAAAATAGTCCCGGTTTATCTTGGACAGGCTGATAGTGTGAGGACCAGGCTCCAGCAGTATGGCAGGACAGGGGCTCATTTGGGCAAGTGCTGCTCGGTTGGGATTCCGAGCGAGCGAATCCGAAAGGGGCCTGGATTGTTTGAGCAGATCCTGGCAAGAGGCTACCCCATTGTGTATAGATGGGCTCCTATGGGAACCAAAAGTGAGGCCCTGAAAACAGAAAGTCAGCTGCTTAACACATTTGATTATGCATGGAACACAAGCATCAATGGTGCACGTCGCCCTGATGATGTCCTTCAGAAACTCAAGAAAATTTCCTCAAAACCTACCCGATTTACTAATATTGTCCAGCGGCTTCTACCTTTCAGACAGAAGCAAGTTGGTATTAGAATTAACTCCAGCAAACTGGTTTCAACAGAGGACAAGTTCAGTGACCATGCTGATAGGGAGAGCCAGACTCTCATAGCCCAGGTTTTCAAGTTTGGCAGATCACACCCTAGGTTAGTTTTGGATAGAAGTGGGATTACTCAGGAAAATACTATAATTTGTGGGGTGGCTGTAGGTGATGGGTCCATCTGTAGAAAGGAACCAGTTCAAGGAAGAAAGTGGTGTGCTGAACACAAAGGGATGAGGATTACAGGGTCGATTACAGTTAGGATATCAAATAGCAATATTGATTCAAAGTGCAGTGTTATCAGCAACAGAGAATTTGTTTCATATGAAAGTGGGATTACTCAGGAGAACACTGAAATTTGTGGGGTGGCTGCAGGTGATGGGTCTAAATGTAGAACACCACCAGTTCAAGGAAGAAAGAGGTGTGAGCACAAAGGGATGAGGATTAAAGGGTCAATTACAGTTGGGATATCAGATAAGAATGTGGACTCAAAATGCAGTGTTCTGAACAACACAGAGCTTGATAGTCATGATGCATCAAATGTGAAATATGAACCGGTACAGCTTCCACCAGTTCATGTTTGTGAGAGCTCTACATCGATATGTGGATTCATCTTGGCCGATGGCTCTCCTTGTAGAACAGAACCAATTCAAGGAAGAAAAAGGTGTGATGAGCACAAAGGGAGAAGGATTCAGAAATGCAAATCCAAGTCAGTGAAAGAAGAGAAGGTCAAAATATGTGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0008150 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0010087 GO:0010089 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0048580 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051172 GO:0051239 GO:0051252 GO:0051253 GO:0060255 GO:0065007 GO:0080050 GO:0080090 GO:0097100 GO:0097159 GO:1901363 GO:1902679 GO:1903506 GO:1903507 GO:2000026 GO:2000033 GO:2000034 GO:2000112 GO:2000113 GO:2000241 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

463

Amino Acids

51.48

Weight (kDa)

9.47

Isoelectric Point (pI)

37.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GIY_YIG_domain	PF19239	27 - 183	4.1e-70	GIY-YIG domain-containing protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004053)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26170 AT5G56780
fragaria_vesca	FvH4_1g07150 FvH4_1g07151 FvH4_1g07151 FvH4_1g07231
malus_domestica	MD02G1075500.v1.1 MD02G1076000.v1.1
prunus_persica	Prupe.7G212600_v2.0.a1
pyrus_communis	pycom02g05960 pycom02g06030
rosa_chinensis	RchiOBHm_Chr2g0093031 RchiOBHm_Chr2g0093041
rosa_laevigata	RLG00000016361 RLG00000016362
rosa_multiflora	Rmu_co8308583.1_g000001 Rmu_sc0034350.1_g000001 Rmu_sc0039828.1_g000001
rosa_roxburghii	Rroxscaffold_2G00148580 Rroxscaffold_2G00148600
rosa_rugosa	Rorug02G0031500 Rorug02G0031500 Rorug02G0031600 Rorug02G0031700 Rorug02G0031800
rosa_samantha	Rh2AG077400 Rh2BG078800 Rh2CG081000 Rh2CG081100 Rh2DG076200 Rh2DG076300
rosa_wichuraiana	Rw0G010360 Rw2G006880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1010
Acc16I	TGCGCA	1 cut(s)	221
Acc36I	ACCTGC	2 cut(s)	177, 1010
AciI	CCGC	1 cut(s)	604
AclWI	GGATC	1 cut(s)	394
AcoI	YGGCCR	1 cut(s)	1263
AcsI	RAATTY	3 cut(s)	564, 959, 1002
AcuI	CTGAAG	1 cut(s)	533
AfaI	GTAC	3 cut(s)	155, 162, 1206
AfiI	CCNNNNNNNGG	4 cut(s)	114, 848, 1055, 1298
AgeI	ACCGGT	1 cut(s)	1201
AgsI	TTSAA	8 cut(s)	40, 245, 666, 730, 848, 933, 1055, 1298
AjiI	CACGTC	1 cut(s)	530
AjnI	CCWGG	5 cut(s)	187, 296, 382, 402, 720
AluBI	AGCT	5 cut(s)	146, 481, 1165, 1210, 1236
AluI	AGCT	5 cut(s)	146, 481, 1165, 1210, 1236
Alw21I	GWGCWC	4 cut(s)	529, 1077, 1238, 1323
Alw44I	GTGCAC	1 cut(s)	525
AlwI	GGATC	1 cut(s)	394
AlwNI	CAGNNNCTG	1 cut(s)	403
AoxI	GGCC	5 cut(s)	104, 232, 380, 459, 1263
ApaI	GGGCCC	1 cut(s)	108
ApaLI	GTGCAC	1 cut(s)	525
ApeKI	GCWGC	3 cut(s)	342, 481, 1016
ApoI	RAATTY	3 cut(s)	564, 959, 1002
AsiGI	ACCGGT	1 cut(s)	1201
Asp700I	GAANNNNTTC	2 cut(s)	843, 1293
AspA2I	CCTAGG	2 cut(s)	173, 749
AspLEI	GCGC	2 cut(s)	60, 222
AspS9I	GGNCC	6 cut(s)	104, 105, 294, 380, 460, 822
AsuC2I	CCSGG	1 cut(s)	263
AsuHPI	GGTGA	2 cut(s)	827, 1034
AvaII	GGWCC	2 cut(s)	294, 822
AvrII	CCTAGG	2 cut(s)	173, 749
BaeGI	GKGCMC	2 cut(s)	108, 529
BanII	GRGCYC	5 cut(s)	108, 188, 328, 439, 1238
BarI	GAAGNNNNNNTAC	2 cut(s)	760, 792
Bbv12I	GWGCWC	4 cut(s)	529, 1077, 1238, 1323
BbvI	GCAGC	3 cut(s)	329, 468, 1003
BccI	CCATC	5 cut(s)	426, 812, 833, 1019, 1262
BceAI	ACGGC	1 cut(s)	219
BciT130I	CCWGG	5 cut(s)	189, 298, 384, 404, 722
BciVI	GTATCC	1 cut(s)	16
BcnI	CCSGG	1 cut(s)	263
BfaI	CTAG	2 cut(s)	174, 750
BfmI	CTRYAG	3 cut(s)	810, 829, 1017
BfuAI	ACCTGC	2 cut(s)	177, 1010
BfuI	GTATCC	1 cut(s)	16
BisI	GCNGC	4 cut(s)	343, 482, 605, 1017
BlnI	CCTAGG	2 cut(s)	173, 749
BlsI	GCNGC	4 cut(s)	344, 483, 606, 1018
Bme1390I	CCNGG	6 cut(s)	189, 263, 298, 384, 404, 722
Bme18I	GGWCC	2 cut(s)	294, 822
BmgBI	CACGTC	1 cut(s)	530
BmgT120I	GGNCC	6 cut(s)	104, 105, 294, 380, 460, 822
BmiI	GGNNCC	7 cut(s)	106, 302, 381, 438, 448, 823, 840
BmrFI	CCNGG	6 cut(s)	189, 263, 298, 384, 404, 722
BmsI	GCATC	3 cut(s)	525, 1168, 1190
BplI	GAGNNNNNCTC	2 cut(s)	694, 726
BpmI	CTGGAG	2 cut(s)	287, 634
BpuEI	CTTGAG	1 cut(s)	542
BpuMI	CCSGG	1 cut(s)	263
Bsa29I	ATCGAT	1 cut(s)	1244
BsaJI	CCNNGG	5 cut(s)	173, 187, 235, 720, 749
BsaWI	WCCGGW	1 cut(s)	1201
BsaXI	ACNNNNNCTCC	2 cut(s)	198, 228
Bsc4I	CCNNNNNNNGG	4 cut(s)	114, 848, 1055, 1298
Bse118I	RCCGGY	1 cut(s)	1201
Bse1I	ACTGG	4 cut(s)	663, 842, 1049, 1217
BseBI	CCWGG	5 cut(s)	189, 298, 384, 404, 722
BseCI	ATCGAT	1 cut(s)	1244
BseDI	CCNNGG	5 cut(s)	173, 187, 235, 720, 749
BseGI	GGATG	2 cut(s)	885, 1089
BseLI	CCNNNNNNNGG	4 cut(s)	114, 848, 1055, 1298
BseMII	CTCAG	2 cut(s)	794, 1001
BseNI	ACTGG	4 cut(s)	663, 842, 1049, 1217
BseSI	GKGCMC	2 cut(s)	108, 529
BseXI	GCAGC	3 cut(s)	329, 468, 1003
BsgI	GTGCAG	1 cut(s)	958
BshFI	GGCC	5 cut(s)	106, 234, 382, 461, 1265
BshTI	ACCGGT	1 cut(s)	1201
BshVI	ATCGAT	1 cut(s)	1244
BsiHKAI	GWGCWC	4 cut(s)	529, 1077, 1238, 1323
BsiSI	CCGG	2 cut(s)	263, 1202
BslFI	GGGAC	1 cut(s)	245
BslI	CCNNNNNNNGG	4 cut(s)	114, 848, 1055, 1298
BsmFI	GGGAC	1 cut(s)	245
BsmI	GAATGC	1 cut(s)	56
BsnI	GGCC	5 cut(s)	106, 234, 382, 461, 1265
Bsp120I	GGGCCC	1 cut(s)	104
Bsp1286I	GDGCHC	8 cut(s)	108, 188, 328, 439, 529, 1077, 1238, 1323
Bsp143I	GATC	2 cut(s)	399, 740
BspACI	CCGC	1 cut(s)	604
BspANI	GGCC	5 cut(s)	106, 234, 382, 461, 1265
BspCNI	CTCAG	2 cut(s)	793, 1000
BspDI	ATCGAT	1 cut(s)	1244
BspHI	TCATGA	1 cut(s)	1174
BspLI	GGNNCC	7 cut(s)	106, 302, 381, 438, 448, 823, 840
BspMAI	CTGCAG	1 cut(s)	1021
BspMI	ACCTGC	2 cut(s)	177, 1010
BspPI	GGATC	1 cut(s)	394
BsrFI	RCCGGY	1 cut(s)	1201
BsrI	ACTGG	4 cut(s)	663, 842, 1049, 1217
BssAI	RCCGGY	1 cut(s)	1201
BssECI	CCNNGG	5 cut(s)	173, 187, 235, 720, 749
BssMI	GATC	2 cut(s)	399, 740
BssT1I	CCWWGG	2 cut(s)	173, 749
Bst2UI	CCWGG	5 cut(s)	189, 298, 384, 404, 722
Bst4CI	ACNGT	3 cut(s)	22, 904, 1108
Bst6I	CTCTTC	2 cut(s)	35, 1362
BstAPI	GCANNNNNTGC	1 cut(s)	342
BstC8I	GCNNGC	2 cut(s)	56, 365
BstDEI	CTNAG	2 cut(s)	780, 987
BstDSI	CCRYGG	1 cut(s)	235
BstF5I	GGATG	2 cut(s)	885, 1089
BstHHI	GCGC	2 cut(s)	60, 222
BstKTI	GATC	2 cut(s)	402, 743
BstMBI	GATC	2 cut(s)	399, 740
BstMWI	GCNNNNNNNGC	2 cut(s)	64, 342
BstNI	CCWGG	5 cut(s)	189, 298, 384, 404, 722
BstSCI	CCNGG	6 cut(s)	187, 261, 296, 382, 402, 720
BstSFI	CTRYAG	3 cut(s)	810, 829, 1017
BstSLI	GKGCMC	2 cut(s)	108, 529
BstV1I	GCAGC	3 cut(s)	329, 468, 1003
BstX2I	RGATCY	1 cut(s)	399
BstXI	CCANNNNNNTGG	2 cut(s)	311, 658
BstYI	RGATCY	1 cut(s)	399
Bsu15I	ATCGAT	1 cut(s)	1244
BsuI	GTATCC	1 cut(s)	16
BsuRI	GGCC	5 cut(s)	106, 234, 382, 461, 1265
BsuTUI	ATCGAT	1 cut(s)	1244
BtgI	CCRYGG	1 cut(s)	235
BtrI	CACGTC	1 cut(s)	530
BtsCI	GGATG	2 cut(s)	885, 1089
BtsI	GCAGTG	3 cut(s)	229, 946, 1150
BtsIMutI	CAGTG	6 cut(s)	229, 688, 946, 996, 1150, 1365
BveI	ACCTGC	2 cut(s)	177, 1010
Cac8I	GCNNGC	2 cut(s)	56, 365
CaiI	CAGNNNCTG	1 cut(s)	403
CciI	TCATGA	1 cut(s)	1174
CfoI	GCGC	2 cut(s)	60, 222
Cfr10I	RCCGGY	1 cut(s)	1201
Cfr13I	GGNCC	6 cut(s)	104, 105, 294, 380, 460, 822
ClaI	ATCGAT	1 cut(s)	1244
Csp6I	GTAC	3 cut(s)	154, 161, 1205
CspAI	ACCGGT	1 cut(s)	1201
CviAII	CATG	5 cut(s)	504, 689, 1175, 1223, 1389
CviQI	GTAC	3 cut(s)	154, 161, 1205
DdeI	CTNAG	2 cut(s)	780, 987
DpnI	GATC	2 cut(s)	401, 742
DpnII	GATC	2 cut(s)	399, 740
EaeI	YGGCCR	1 cut(s)	1263
Eam1104I	CTCTTC	2 cut(s)	35, 1362
EarI	CTCTTC	2 cut(s)	35, 1362
Ecl136II	GAGCTC	1 cut(s)	1236
Eco130I	CCWWGG	2 cut(s)	173, 749
Eco24I	GRGCYC	5 cut(s)	108, 188, 328, 439, 1238
Eco32I	GATATC	2 cut(s)	912, 1116
Eco47I	GGWCC	2 cut(s)	294, 822
Eco53kI	GAGCTC	1 cut(s)	1236
Eco57I	CTGAAG	1 cut(s)	533
EcoICRI	GAGCTC	1 cut(s)	1236
EcoO109I	RGGNCCY	3 cut(s)	105, 380, 460
EcoRII	CCWGG	5 cut(s)	187, 296, 382, 402, 720
EcoRV	GATATC	2 cut(s)	912, 1116
EcoT14I	CCWWGG	2 cut(s)	173, 749
EcoT22I	ATGCAT	2 cut(s)	505, 1183
EcoT38I	GRGCYC	5 cut(s)	108, 188, 328, 439, 1238
ErhI	CCWWGG	2 cut(s)	173, 749
FaeI	CATG	5 cut(s)	507, 692, 1178, 1226, 1392
FaqI	GGGAC	1 cut(s)	245
FatI	CATG	5 cut(s)	503, 688, 1174, 1222, 1388
FauNDI	CATATG	1 cut(s)	970
Fnu4HI	GCNGC	4 cut(s)	343, 482, 605, 1017
FokI	GGATG	2 cut(s)	892, 1096
FriOI	GRGCYC	5 cut(s)	108, 188, 328, 439, 1238
Fsp4HI	GCNGC	4 cut(s)	343, 482, 605, 1017
FspBI	CTAG	2 cut(s)	174, 750
FspI	TGCGCA	1 cut(s)	221
GlaI	GCGC	2 cut(s)	59, 221
GluI	GCNGC	4 cut(s)	343, 482, 605, 1017
GsuI	CTGGAG	2 cut(s)	287, 634
HaeIII	GGCC	5 cut(s)	106, 234, 382, 461, 1265
HapII	CCGG	2 cut(s)	263, 1202
HhaI	GCGC	2 cut(s)	60, 222
Hin1II	CATG	5 cut(s)	507, 692, 1178, 1226, 1392
Hin6I	GCGC	2 cut(s)	58, 220
HinP1I	GCGC	2 cut(s)	58, 220
HinfI	GANTC	7 cut(s)	355, 369, 709, 929, 1133, 1254, 1336
HpaII	CCGG	2 cut(s)	263, 1202
HphI	GGTGA	2 cut(s)	827, 1034
Hpy166II	GTNNAC	2 cut(s)	527, 1132
Hpy188I	TCNGA	8 cut(s)	206, 360, 374, 552, 620, 1120, 1152, 1341
Hpy188III	TCNNGA	4 cut(s)	559, 782, 989, 1175
Hpy8I	GTNNAC	2 cut(s)	527, 1132
Hpy99I	CGWCG	1 cut(s)	534
HpyAV	CCTTC	6 cut(s)	85, 130, 134, 557, 1326, 1366
HpyCH4III	ACNGT	3 cut(s)	22, 904, 1108
HpyCH4IV	ACGT	1 cut(s)	529
HpyCH4V	TGCA	9 cut(s)	54, 503, 527, 939, 1019, 1143, 1181, 1347, 1388
HpyF10VI	GCNNNNNNNGC	2 cut(s)	64, 342
HpyF3I	CTNAG	2 cut(s)	780, 987
HpySE526I	ACGT	1 cut(s)	529
Hsp92II	CATG	5 cut(s)	507, 692, 1178, 1226, 1392
HspAI	GCGC	2 cut(s)	58, 220
Kzo9I	GATC	2 cut(s)	399, 740
LmnI	GCTCC	3 cut(s)	143, 306, 442
Lsp1109I	GCAGC	3 cut(s)	329, 468, 1003
LweI	GCATC	3 cut(s)	525, 1168, 1190
MaeI	CTAG	2 cut(s)	174, 750
MaeII	ACGT	1 cut(s)	529
MaeIII	GTNAC	1 cut(s)	683
MalI	GATC	2 cut(s)	401, 742
MboI	GATC	2 cut(s)	399, 740
MboII	GAAGA	6 cut(s)	52, 59, 864, 1071, 1314, 1379
MfeI	CAATTG	1 cut(s)	85
MflI	RGATCY	1 cut(s)	399
MhlI	GDGCHC	8 cut(s)	108, 188, 328, 439, 529, 1077, 1238, 1323
MluCI	AATT	8 cut(s)	85, 564, 642, 795, 959, 1002, 1101, 1293
MlyI	GAGTC	2 cut(s)	703, 1127
Mph1103I	ATGCAT	2 cut(s)	505, 1183
MroXI	GAANNNNTTC	2 cut(s)	843, 1293
MseI	TTAA	4 cut(s)	17, 486, 645, 1092
MslI	CAYNNNNRTG	2 cut(s)	1227, 1246
MspA1I	CMGCKG	2 cut(s)	481, 604
MspI	CCGG	2 cut(s)	263, 1202
MspR9I	CCNGG	6 cut(s)	189, 263, 298, 384, 404, 722
MunI	CAATTG	1 cut(s)	85
Mva1269I	GAATGC	1 cut(s)	56
MvaI	CCWGG	5 cut(s)	189, 298, 384, 404, 722
MwoI	GCNNNNNNNGC	2 cut(s)	64, 342
NciI	CCSGG	1 cut(s)	263
NdeI	CATATG	1 cut(s)	970
NdeII	GATC	2 cut(s)	399, 740
NlaIII	CATG	5 cut(s)	507, 692, 1178, 1226, 1392
NlaIV	GGNNCC	7 cut(s)	106, 302, 381, 438, 448, 823, 840
NmuCI	GTSAC	1 cut(s)	683
NsbI	TGCGCA	1 cut(s)	221
NsiI	ATGCAT	2 cut(s)	505, 1183
PagI	TCATGA	1 cut(s)	1174
PaqCI	CACCTGC	1 cut(s)	1010
PctI	GAATGC	1 cut(s)	56
PdmI	GAANNNNTTC	2 cut(s)	843, 1293
PfeI	GAWTC	5 cut(s)	355, 369, 929, 1254, 1336
PinAI	ACCGGT	1 cut(s)	1201
PkrI	GCNGC	4 cut(s)	344, 483, 606, 1018
PleI	GAGTC	2 cut(s)	703, 1127
PpsI	GAGTC	2 cut(s)	703, 1127
Psp124BI	GAGCTC	1 cut(s)	1238
Psp6I	CCWGG	5 cut(s)	187, 296, 382, 402, 720
PspGI	CCWGG	5 cut(s)	187, 296, 382, 402, 720
PspN4I	GGNNCC	7 cut(s)	106, 302, 381, 438, 448, 823, 840
PspOMI	GGGCCC	1 cut(s)	104
PspPI	GGNCC	6 cut(s)	104, 105, 294, 380, 460, 822
PstI	CTGCAG	1 cut(s)	1021
PstNI	CAGNNNCTG	1 cut(s)	403
PsuI	RGATCY	1 cut(s)	399
PvuII	CAGCTG	1 cut(s)	481
RsaI	GTAC	3 cut(s)	155, 162, 1206
RsaNI	GTAC	3 cut(s)	154, 161, 1205
RseI	CAYNNNNRTG	2 cut(s)	1227, 1246
SacI	GAGCTC	1 cut(s)	1238
SaqAI	TTAA	4 cut(s)	17, 486, 645, 1092
SatI	GCNGC	4 cut(s)	343, 482, 605, 1017
Sau3AI	GATC	2 cut(s)	399, 740
Sau96I	GGNCC	6 cut(s)	104, 105, 294, 380, 460, 822
SchI	GAGTC	2 cut(s)	703, 1127
ScrFI	CCNGG	6 cut(s)	189, 263, 298, 384, 404, 722
SduI	GDGCHC	8 cut(s)	108, 188, 328, 439, 529, 1077, 1238, 1323
SfaNI	GCATC	3 cut(s)	525, 1168, 1190
SfcI	CTRYAG	3 cut(s)	810, 829, 1017
SinI	GGWCC	2 cut(s)	294, 822
SmiMI	CAYNNNNRTG	2 cut(s)	1227, 1246
SmlI	CTYRAG	1 cut(s)	557
SmoI	CTYRAG	1 cut(s)	557
Sse9I	AATT	8 cut(s)	85, 564, 642, 795, 959, 1002, 1101, 1293
SsiI	CCGC	1 cut(s)	604
SspI	AATATT	2 cut(s)	595, 925
SspMI	CTAG	2 cut(s)	174, 750
SstI	GAGCTC	1 cut(s)	1238
StyD4I	CCNGG	6 cut(s)	187, 261, 296, 382, 402, 720
StyI	CCWWGG	2 cut(s)	173, 749
TaaI	ACNGT	3 cut(s)	22, 904, 1108
TaiI	ACGT	1 cut(s)	532
TaqI	TCGA	2 cut(s)	896, 1244
TasI	AATT	8 cut(s)	85, 564, 642, 795, 959, 1002, 1101, 1293
TatI	WGTACW	1 cut(s)	160
TauI	GCSGC	1 cut(s)	607
TfiI	GAWTC	5 cut(s)	355, 369, 929, 1254, 1336
Tru1I	TTAA	4 cut(s)	17, 486, 645, 1092
Tru9I	TTAA	4 cut(s)	17, 486, 645, 1092
TscAI	CASTG	6 cut(s)	229, 688, 946, 1003, 1150, 1365
TseFI	GTSAC	1 cut(s)	683
TseI	GCWGC	3 cut(s)	342, 481, 1016
Tsp45I	GTSAC	1 cut(s)	683
TspDTI	ATGAA	6 cut(s)	213, 957, 987, 1211, 1212, 1246
TspRI	CASTG	6 cut(s)	229, 688, 946, 1003, 1150, 1365
VneI	GTGCAC	1 cut(s)	525
VpaK11BI	GGWCC	2 cut(s)	294, 822
XapI	RAATTY	3 cut(s)	564, 959, 1002
XmaJI	CCTAGG	2 cut(s)	173, 749
XmnI	GAANNNNTTC	2 cut(s)	843, 1293
XspI	CTAG	2 cut(s)	174, 750
Zsp2I	ATGCAT	2 cut(s)	505, 1183

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.