Rorug02G0031800
NAC Family

inactive protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0004053
Physical Location & Seq
Forward (+)
2532184 .. 2534047
1864 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0031800.1

Sequence Viewer

Length: 1038 bp
ATGTTTTGGTATATAGTGAAGAGTAAACTAGCTATAGACACACAACTGGGTTTGGTGTTTTCGTTGTTCATTATAGATATGAAAGAGTCAGTTTTCTTTGTCATTCTGGTGATGCTTTTGCCTGTGAAAGGTCAATTGAAAACCGGGTTTTATTCCTCTTCATGTCCGAAAGCCGAGGACATTGTCCGGTCCACTGTTGAGTCATACTACAACAAAGATCCTAGTATTGCAGCTGGCTTGCTTAGGCTTCACTTCCATGACTGCTTTGTTCAGGGTTGTGATGCTTCGGTTTTGATAAAGGGCTCCTCCGCGGAGAGGAATGCTGTGCCGAATCAGGGGCTAAGAGGATTTGAAGTTATTGACGATGCAAAGGCACAACTAGAGGCCTTGTGTCCTGGACTTGTTTCATGTGCTGATATAATTGCACTGGCTGCTCGTGATTCTGTTGACTTGAGTGACGGTCCAAGTTGGAGAGTACCTACCGGAAGAAGAGACGGCAGGATCTCTTCGTCGTCTCAGGCATCGAATTTGCCATCTCCTCTCGATTCCATTGCTGTCCAGAGGCAGAAATTTGCTGCTAAAGGCCTTGACGATCACGATCTTGTAACTCTAGTTGGGGCACATACCATTGGCCAAACGGACTGCTTATTTTTCAGGTACCGCTTGTACAACTTCACAGCTACCGGAAATTCTGACCCAACCATAAGCCAAGCATCTCTAGCAGAACTCCAAGCTCTCTGCCCCAAAGATGGTGATGGCTCCAAACGTGTGGCATTAGATAAAGGTAGCCAGACCAAGTTTGATGCGAGTTTCTTCAAGAATGTGAGGGATGGTAACGCAGTCCTGGAGTCGGATCAGAGGCTTTTAGGTGATGCTACGACGCGCAACATACTGCAAAACTATGCTGGAAGCATAAGAGGATTGCTAGGGTTTAGATTTGACTTGGAGTTCCCAAAAGCTATGATAAAAATGAGCAATATTGAGGTGAAAACTGGTGCAGAAGGAGAGATTAGAAAAGTGTGCTCCAAGTTTAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase Pkinase_Tyr

Protein Analysis

345

Amino Acids

37.67

Weight (kDa)

7.53

Isoelectric Point (pI)

38.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
peroxidase PF00141 62 - 303 1.4e-84 Peroxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 657
AccB1I GGYRCC 1 cut(s) 657
AccII CGCG 2 cut(s) 311, 883
AciI CCGC 3 cut(s) 309, 311, 661
AclWI GGATC 3 cut(s) 212, 509, 861
AcoI YGGCCR 1 cut(s) 631
AcsI RAATTY 3 cut(s) 526, 569, 688
AfaI GTAC 3 cut(s) 477, 659, 668
AfiI CCNNNNNNNGG 5 cut(s) 128, 315, 335, 749, 850
AflIII ACRYGT 1 cut(s) 766
AgsI TTSAA 3 cut(s) 139, 353, 817
AjnI CCWGG 2 cut(s) 394, 843
AluBI AGCT 5 cut(s) 32, 233, 680, 734, 959
AluI AGCT 5 cut(s) 32, 233, 680, 734, 959
Alw21I GWGCWC 1 cut(s) 1025
Alw26I GTCTC 2 cut(s) 486, 519
AlwI GGATC 3 cut(s) 212, 509, 861
AoxI GGCC 3 cut(s) 384, 583, 631
ApeKI GCWGC 3 cut(s) 230, 431, 575
ApoI RAATTY 3 cut(s) 526, 569, 688
Asp718I GGTACC 1 cut(s) 657
AspLEI GCGC 1 cut(s) 885
AspS9I GGNCC 2 cut(s) 189, 461
AsuC2I CCSGG 1 cut(s) 145
AsuHPI GGTGA 4 cut(s) 121, 764, 881, 997
AvaII GGWCC 2 cut(s) 189, 461
BaeGI GKGCMC 1 cut(s) 622
BalI TGGCCA 1 cut(s) 633
BanI GGYRCC 1 cut(s) 657
BanII GRGCYC 1 cut(s) 305
BauI CACGAG 1 cut(s) 435
Bbv12I GWGCWC 1 cut(s) 1025
BbvI GCAGC 3 cut(s) 242, 418, 562
BccI CCATC 4 cut(s) 541, 743, 749, 824
BceAI ACGGC 1 cut(s) 511
BcgI CGANNNNNNTGC 2 cut(s) 533, 567
BciT130I CCWGG 2 cut(s) 396, 845
BcnI CCSGG 1 cut(s) 145
BcoDI GTCTC 2 cut(s) 486, 519
BfaI CTAG 6 cut(s) 29, 222, 380, 611, 719, 926
BfmI CTRYAG 1 cut(s) 33
BisI GCNGC 3 cut(s) 231, 432, 576
BlsI GCNGC 3 cut(s) 232, 433, 577
Bme1390I CCNGG 3 cut(s) 145, 396, 845
Bme18I GGWCC 2 cut(s) 189, 461
BmgT120I GGNCC 2 cut(s) 189, 461
BmiI GGNNCC 3 cut(s) 304, 659, 760
BmrFI CCNGG 3 cut(s) 145, 396, 845
BmrI ACTGGG 1 cut(s) 56
BmsI GCATC 7 cut(s) 102, 271, 355, 530, 722, 793, 862
BmuI ACTGGG 1 cut(s) 56
BpmI CTGGAG 1 cut(s) 866
Bpu10I CCTNAGC 1 cut(s) 242
BpuEI CTTGAG 1 cut(s) 472
BpuMI CCSGG 1 cut(s) 145
BsaBI GATNNNNATC 1 cut(s) 597
BsaJI CCNNGG 2 cut(s) 174, 309
BsaWI WCCGGW 3 cut(s) 186, 482, 683
Bsc4I CCNNNNNNNGG 5 cut(s) 128, 315, 335, 749, 850
Bse1I ACTGG 3 cut(s) 51, 432, 997
Bse3DI GCAATG 1 cut(s) 549
Bse8I GATNNNNATC 1 cut(s) 597
BseBI CCWGG 2 cut(s) 396, 845
BseDI CCNNGG 2 cut(s) 174, 309
BseGI GGATG 1 cut(s) 835
BseJI GATNNNNATC 1 cut(s) 597
BseLI CCNNNNNNNGG 5 cut(s) 128, 315, 335, 749, 850
BseMI GCAATG 1 cut(s) 549
BseMII CTCAG 1 cut(s) 530
BseNI ACTGG 3 cut(s) 51, 432, 997
BseRI GAGGAG 2 cut(s) 295, 528
BseSI GKGCMC 1 cut(s) 622
BseXI GCAGC 3 cut(s) 242, 418, 562
BsgI GTGCAG 1 cut(s) 1017
Bsh1236I CGCG 2 cut(s) 311, 883
BshFI GGCC 3 cut(s) 386, 585, 633
BshNI GGYRCC 1 cut(s) 657
BsiHKAI GWGCWC 1 cut(s) 1025
BsiSI CCGG 4 cut(s) 144, 187, 483, 684
BslI CCNNNNNNNGG 5 cut(s) 128, 315, 335, 749, 850
BsmAI GTCTC 2 cut(s) 486, 519
BsmBI CGTCTC 2 cut(s) 486, 519
BsmI GAATGC 1 cut(s) 325
BsnI GGCC 3 cut(s) 386, 585, 633
Bsp1286I GDGCHC 3 cut(s) 305, 622, 1025
Bsp1407I TGTACA 1 cut(s) 666
Bsp143I GATC 5 cut(s) 217, 501, 592, 598, 853
BspACI CCGC 3 cut(s) 309, 311, 661
BspANI GGCC 3 cut(s) 386, 585, 633
BspCNI CTCAG 1 cut(s) 529
BspFNI CGCG 2 cut(s) 311, 883
BspLI GGNNCC 3 cut(s) 304, 659, 760
BspPI GGATC 3 cut(s) 212, 509, 861
BspT107I GGYRCC 1 cut(s) 657
BsrDI GCAATG 1 cut(s) 549
BsrGI TGTACA 1 cut(s) 666
BsrI ACTGG 3 cut(s) 51, 432, 997
BssECI CCNNGG 2 cut(s) 174, 309
BssMI GATC 5 cut(s) 217, 501, 592, 598, 853
BssSI CACGAG 1 cut(s) 435
Bst2BI CACGAG 1 cut(s) 435
Bst2UI CCWGG 2 cut(s) 396, 845
Bst4CI ACNGT 2 cut(s) 196, 461
Bst6I CTCTTC 4 cut(s) 14, 163, 484, 511
BstAPI GCANNNNNTGC 1 cut(s) 431
BstAUI TGTACA 1 cut(s) 666
BstC8I GCNNGC 2 cut(s) 235, 239
BstDEI CTNAG 3 cut(s) 242, 341, 516
BstDSI CCRYGG 1 cut(s) 309
BstENI CCTNNNNNAGG 1 cut(s) 126
BstF5I GGATG 1 cut(s) 835
BstFNI CGCG 2 cut(s) 311, 883
BstHHI GCGC 1 cut(s) 885
BstKTI GATC 5 cut(s) 220, 504, 595, 601, 856
BstMAI GTCTC 2 cut(s) 486, 519
BstMBI GATC 5 cut(s) 217, 501, 592, 598, 853
BstMWI GCNNNNNNNGC 2 cut(s) 431, 719
BstNI CCWGG 2 cut(s) 396, 845
BstSCI CCNGG 3 cut(s) 143, 394, 843
BstSFI CTRYAG 1 cut(s) 33
BstSLI GKGCMC 1 cut(s) 622
BstUI CGCG 2 cut(s) 311, 883
BstV1I GCAGC 3 cut(s) 242, 418, 562
BstX2I RGATCY 2 cut(s) 217, 501
BstXI CCANNNNNNTGG 1 cut(s) 769
BstYI RGATCY 2 cut(s) 217, 501
BsuRI GGCC 3 cut(s) 386, 585, 633
BtgI CCRYGG 1 cut(s) 309
BtsCI GGATG 1 cut(s) 835
BtsIMutI CAGTG 2 cut(s) 192, 425
Cac8I GCNNGC 2 cut(s) 235, 239
CfoI GCGC 1 cut(s) 885
Cfr13I GGNCC 2 cut(s) 189, 461
Cfr42I CCGCGG 1 cut(s) 312
CseI GACGC 1 cut(s) 889
Csp6I GTAC 3 cut(s) 476, 658, 667
CviAII CATG 3 cut(s) 162, 257, 408
CviQI GTAC 3 cut(s) 476, 658, 667
DdeI CTNAG 3 cut(s) 242, 341, 516
DpnI GATC 5 cut(s) 219, 503, 594, 600, 855
DpnII GATC 5 cut(s) 217, 501, 592, 598, 853
EaeI YGGCCR 1 cut(s) 631
Eam1104I CTCTTC 4 cut(s) 14, 163, 484, 511
EarI CTCTTC 4 cut(s) 14, 163, 484, 511
Eco147I AGGCCT 2 cut(s) 386, 585
Eco24I GRGCYC 1 cut(s) 305
Eco47I GGWCC 2 cut(s) 189, 461
EcoNI CCTNNNNNAGG 1 cut(s) 126
EcoRII CCWGG 2 cut(s) 394, 843
EcoT38I GRGCYC 1 cut(s) 305
Esp3I CGTCTC 2 cut(s) 486, 519
FaeI CATG 3 cut(s) 165, 260, 411
FatI CATG 3 cut(s) 161, 256, 407
Fnu4HI GCNGC 3 cut(s) 231, 432, 576
FokI GGATG 1 cut(s) 842
FriOI GRGCYC 1 cut(s) 305
Fsp4HI GCNGC 3 cut(s) 231, 432, 576
FspBI CTAG 6 cut(s) 29, 222, 380, 611, 719, 926
GlaI GCGC 1 cut(s) 884
GluI GCNGC 3 cut(s) 231, 432, 576
GsuI CTGGAG 1 cut(s) 866
HaeIII GGCC 3 cut(s) 386, 585, 633
HapII CCGG 4 cut(s) 144, 187, 483, 684
HgaI GACGC 1 cut(s) 889
HhaI GCGC 1 cut(s) 885
Hin1II CATG 3 cut(s) 165, 260, 411
Hin6I GCGC 1 cut(s) 883
HinP1I GCGC 1 cut(s) 883
HincII GTYRAC 1 cut(s) 448
HindII GTYRAC 1 cut(s) 448
HinfI GANTC 6 cut(s) 86, 200, 331, 440, 545, 848
HpaII CCGG 4 cut(s) 144, 187, 483, 684
HphI GGTGA 4 cut(s) 121, 764, 881, 997
Hpy166II GTNNAC 3 cut(s) 26, 192, 448
Hpy188I TCNGA 4 cut(s) 168, 694, 853, 858
Hpy188III TCNNGA 5 cut(s) 437, 542, 559, 596, 817
Hpy8I GTNNAC 3 cut(s) 26, 192, 448
Hpy99I CGWCG 2 cut(s) 514, 883
HpyAV CCTTC 1 cut(s) 995
HpyCH4III ACNGT 2 cut(s) 196, 461
HpyCH4IV ACGT 1 cut(s) 766
HpyCH4V TGCA 5 cut(s) 230, 368, 425, 895, 998
HpyF10VI GCNNNNNNNGC 2 cut(s) 431, 719
HpyF3I CTNAG 3 cut(s) 242, 341, 516
HpySE526I ACGT 1 cut(s) 766
Hsp92II CATG 3 cut(s) 165, 260, 411
HspAI GCGC 1 cut(s) 883
KpnI GGTACC 1 cut(s) 661
KspI CCGCGG 1 cut(s) 312
Kzo9I GATC 5 cut(s) 217, 501, 592, 598, 853
LmnI GCTCC 3 cut(s) 308, 764, 1028
Lsp1109I GCAGC 3 cut(s) 242, 418, 562
LweI GCATC 7 cut(s) 102, 271, 355, 530, 722, 793, 862
MaeI CTAG 6 cut(s) 29, 222, 380, 611, 719, 926
MaeII ACGT 1 cut(s) 766
MaeIII GTNAC 3 cut(s) 455, 604, 833
MalI GATC 5 cut(s) 219, 503, 594, 600, 855
MboI GATC 5 cut(s) 217, 501, 592, 598, 853
MboII GAAGA 6 cut(s) 31, 150, 498, 498, 501, 805
MfeI CAATTG 1 cut(s) 134
MflI RGATCY 2 cut(s) 217, 501
MhlI GDGCHC 3 cut(s) 305, 622, 1025
MlsI TGGCCA 1 cut(s) 633
MluCI AATT 5 cut(s) 134, 420, 526, 569, 688
MluNI TGGCCA 1 cut(s) 633
MlyI GAGTC 3 cut(s) 95, 209, 857
MmeI TCCRAC 2 cut(s) 449, 831
Mox20I TGGCCA 1 cut(s) 633
MscI TGGCCA 1 cut(s) 633
MseI TTAA 1 cut(s) 1032
MslI CAYNNNNRTG 2 cut(s) 107, 255
Msp20I TGGCCA 1 cut(s) 633
MspA1I CMGCKG 2 cut(s) 233, 311
MspI CCGG 4 cut(s) 144, 187, 483, 684
MspR9I CCNGG 3 cut(s) 145, 396, 845
MunI CAATTG 1 cut(s) 134
Mva1269I GAATGC 1 cut(s) 325
MvaI CCWGG 2 cut(s) 396, 845
MvnI CGCG 2 cut(s) 311, 883
MwoI GCNNNNNNNGC 2 cut(s) 431, 719
NciI CCSGG 1 cut(s) 145
NdeII GATC 5 cut(s) 217, 501, 592, 598, 853
NlaIII CATG 3 cut(s) 165, 260, 411
NlaIV GGNNCC 3 cut(s) 304, 659, 760
NmeAIII GCCGAG 1 cut(s) 199
NmuCI GTSAC 1 cut(s) 455
PceI AGGCCT 2 cut(s) 386, 585
PctI GAATGC 1 cut(s) 325
PfeI GAWTC 3 cut(s) 331, 440, 545
PflFI GACNNNGTC 1 cut(s) 182
PfoI TCCNGGA 2 cut(s) 394, 843
PkrI GCNGC 3 cut(s) 232, 433, 577
PleI GAGTC 3 cut(s) 94, 208, 856
PpsI GAGTC 3 cut(s) 94, 208, 856
Psp6I CCWGG 2 cut(s) 394, 843
PspGI CCWGG 2 cut(s) 394, 843
PspN4I GGNNCC 3 cut(s) 304, 659, 760
PspPI GGNCC 2 cut(s) 189, 461
PsuI RGATCY 2 cut(s) 217, 501
PsyI GACNNNGTC 1 cut(s) 182
PvuII CAGCTG 1 cut(s) 233
RsaI GTAC 3 cut(s) 477, 659, 668
RsaNI GTAC 3 cut(s) 476, 658, 667
RseI CAYNNNNRTG 2 cut(s) 107, 255
SacII CCGCGG 1 cut(s) 312
SaqAI TTAA 1 cut(s) 1032
SatI GCNGC 3 cut(s) 231, 432, 576
Sau3AI GATC 5 cut(s) 217, 501, 592, 598, 853
Sau96I GGNCC 2 cut(s) 189, 461
SchI GAGTC 3 cut(s) 95, 209, 857
ScrFI CCNGG 3 cut(s) 145, 396, 845
SduI GDGCHC 3 cut(s) 305, 622, 1025
SfaNI GCATC 7 cut(s) 102, 271, 355, 530, 722, 793, 862
SfcI CTRYAG 1 cut(s) 33
Sfr303I CCGCGG 1 cut(s) 312
SgrBI CCGCGG 1 cut(s) 312
SinI GGWCC 2 cut(s) 189, 461
SmiMI CAYNNNNRTG 2 cut(s) 107, 255
SmlI CTYRAG 1 cut(s) 451
SmoI CTYRAG 1 cut(s) 451
Sse9I AATT 5 cut(s) 134, 420, 526, 569, 688
SseBI AGGCCT 2 cut(s) 386, 585
SsiI CCGC 3 cut(s) 309, 311, 661
SspI AATATT 1 cut(s) 979
SspMI CTAG 6 cut(s) 29, 222, 380, 611, 719, 926
StuI AGGCCT 2 cut(s) 386, 585
StyD4I CCNGG 3 cut(s) 143, 394, 843
TaaI ACNGT 2 cut(s) 196, 461
TaiI ACGT 1 cut(s) 769
TaqI TCGA 2 cut(s) 524, 543
TasI AATT 5 cut(s) 134, 420, 526, 569, 688
TatI WGTACW 1 cut(s) 666
TfiI GAWTC 3 cut(s) 331, 440, 545
Tru1I TTAA 1 cut(s) 1032
Tru9I TTAA 1 cut(s) 1032
TscAI CASTG 2 cut(s) 199, 432
TseFI GTSAC 1 cut(s) 455
TseI GCWGC 3 cut(s) 230, 431, 575
Tsp45I GTSAC 1 cut(s) 455
TspDTI ATGAA 4 cut(s) 58, 95, 150, 396
TspGWI ACGGA 1 cut(s) 653
TspRI CASTG 2 cut(s) 199, 432
Tth111I GACNNNGTC 1 cut(s) 182
VpaK11BI GGWCC 2 cut(s) 189, 461
XagI CCTNNNNNAGG 1 cut(s) 126
XapI RAATTY 3 cut(s) 526, 569, 688
XspI CTAG 6 cut(s) 29, 222, 380, 611, 719, 926
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.