Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0002146

Physical Location & Seq

Genomic Coordinates Forward (+)

11718005 .. 11720933

Gene Structure 2929 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000016970

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1509 bp

ATGGGCTTAAGCTTTTTCATCCAATGCGCTTGCTTAGTGTCGTTTCTTGTATCCCTTACCCTAGTTCATGCTCAGAGAAGGGTTTTTGATGTGACAAATTACGGTGCTCGTGGAGATGGAAGAACAGATAACAGCAAGGCCTTCATTAATGCATGGAATGGAGCTTGTCAGAACATTGGAGGAGGTATGGTGCTGTTCCCAAAAGGCACATTTGTGGTGGCTCCGGTGGTTCTTCCAGGTCGATGCAAGGGACCAATGGAGTTGGAAATTCAGGGTACCCTACAGGCTTCTAAGGAGGTCAAAGATTTCATTAATATTGACCATTGGATCACCATACAATACGTTGACCGCTTGAATATTAGTGGTGGCGGAACCCTAGATGGCCTCGGAGCGGATGGTTGGGGATATAATGACTGCCTAAAAAACCCAGGCCGTTGCAAGCAACTCCCTGCTACACTGCGGTTGGATTTTGTCACCAAAGGTTACATAAACGACATAACATCGATCAACAGCAAAAATACCCACATCAATCTTTTTGCATGCAAGGACGTACTTATTCGCAACATCAAGCTATCAGCTCCCGAAGACAGTCCGAACACCGATGGAATCCACATTGGCAACTCACAGAACATCTATATCGTAGACTCACAATTATCCACCGGTGACGATTGTGTCTCCGTACTCCCCGGATCACAATACATCAATATCACCGGTGTGCAGTGCGGTCCAGGCCATGGAATTAGCATTGGAAGTCTCGGCAAAGGTGCTGGTGAGACTGTTAATGACATGTATGTAACACAATGCAGATTTGTGGGTACTCAAAATGGTGTAAGAATCAAAACATGGGCTGTGGATTCTAAACCTGGAACTGTTTCACGTGTTGCCTTTGAGAACCTTGAAATGGTTAATGTGGACAATCCCATCATTATTGATCAAGAATATTGTCCTGGTGGTGGTTGTAATACACAGGCATCCTCCCAAGTTCAGATTAGTGACGTAAAGTTTAATGACATTAGAGGCACTTCCGCTACAAAAGAAGCAGTTACTCTCAAATGCAGCCGAAGTAAACCTTGCCAAAATATCGAGCTGAAGGACATTGACCTAACCTTCCGAGGACCTGGAGGACCGGCGGTTTCATTGTGCTCTAATGTAGAAGGCAGAGCTTACGGCCTACAAAAGCCCATATCGAATTTAAATACACCGCGAGCGGCTGCTTACAATGAAATGGAATATGATGACTTAGAAGGCAGAGTTTCCGGCCTACAAAAGCCCATATCGAATTTAAATACACCGCGAGCAGCTGCTTACAATGAAATAGAGTATGATGACTTAGAAGGCAGAGCTTCCGGCCTACAAAAGCCCATATCGAATTTAAATACACCGCGAGCAGCTGCTTACAATGAAGAGTATGATGACTTAGAAGGCAGAGCTTATGGTCTACAGAACCCCTCCTGGAATCTAAACACGGTGCAGGTATCCCCTCGCGGCGAAATAGAGGATCCTATATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00040 ko01100 map00040 map01100

Pfam Domains

Protein Families

Glyco_hydro_28

Protein Analysis

503

Amino Acids

54.32

Weight (kDa)

5.26

Isoelectric Point (pI)

32.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pect-lyase_RHGA_epim	PF12708	29 - 76	2.2e-07	Rhamnogalacturonase A/epimerase, pectate lyase-like
Glyco_hydro_28	PF00295	56 - 385	1.4e-96	Glycosyl hydrolases family 28

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002146)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g12491 FvH4_1g12500 FvH4_3g23740 FvH4_4g28770
malus_domestica	MD03G1196500.v1.1 MD11G1207000.v1.1
prunus_persica	Prupe.4G218900_v2.0.a1 Prupe.4G228600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0100401 RchiOBHm_Chr4g0436881 RchiOBHm_Chr5g0041901 RchiOBHm_Chr5g0041941
rosa_laevigata	RLG00000006489 RLG00000016970 RLG00000016994 RLG00000034104
rosa_multiflora	Rmu_sc0001095.1_g000011 Rmu_sc0001464.1_g000018 Rmu_sc0009443.1_g000011 Rmu_sc0010997.1_g000006
rosa_roxburghii	Rroxscaffold_2G00142280 Rroxscaffold_5G00377950
rosa_rugosa	Rorug02G0087800 Rorug04G0297000 Rorug05G0197100
rosa_samantha	Rh2AG137300 Rh2AG137500 Rh2BG140500 Rh2BG140700 Rh2CG142600 Rh2DG142500 Rh4AG351300 Rh4BG360300 Rh4CG374600 Rh4DG354600 Rh5AG281700 Rh5AG281900 Rh5BG287500 Rh5CG318800 Rh5DG296100 Rh5DG296400
rosa_wichuraiana	Rw0G001350 Rw2G010740 Rw4G030760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	671
Acc36I	ACCTGC	1 cut(s)	1462
Acc65I	GGTACC	1 cut(s)	275
AccB1I	GGYRCC	1 cut(s)	275
AccB7I	CCANNNNNTGG	1 cut(s)	734
AccBSI	CCGCTC	2 cut(s)	392, 1208
AccI	GTMKAC	2 cut(s)	642, 1438
AccII	CGCG	4 cut(s)	1204, 1294, 1384, 1485
AclWI	GGATC	4 cut(s)	335, 697, 1493, 1506
AcsI	RAATTY	4 cut(s)	267, 1189, 1279, 1369
AcuI	CTGAAG	1 cut(s)	1109
AcvI	CACGTG	1 cut(s)	878
AfaI	GTAC	4 cut(s)	277, 552, 681, 817
AfiI	CCNNNNNNNGG	4 cut(s)	391, 734, 901, 953
AflII	CTTAAG	1 cut(s)	7
AflIII	ACRYGT	2 cut(s)	786, 877
AgeI	ACCGGT	2 cut(s)	659, 710
AgsI	TTSAA	2 cut(s)	355, 899
AjnI	CCWGG	7 cut(s)	235, 427, 727, 862, 946, 1117, 1451
AleI	CACNNNNGTG	2 cut(s)	212, 713
Alw21I	GWGCWC	2 cut(s)	109, 1145
Alw26I	GTCTC	3 cut(s)	679, 758, 767
AlwI	GGATC	4 cut(s)	335, 697, 1493, 1506
AoxI	GGCC	7 cut(s)	138, 382, 430, 730, 1168, 1258, 1348
ApeKI	GCWGC	6 cut(s)	1056, 1211, 1298, 1301, 1388, 1391
ApoI	RAATTY	4 cut(s)	267, 1189, 1279, 1369
AseI	ATTAAT	2 cut(s)	147, 312
AsiGI	ACCGGT	2 cut(s)	659, 710
Asp700I	GAANNNNTTC	1 cut(s)	871
Asp718I	GGTACC	1 cut(s)	275
AspLEI	GCGC	1 cut(s)	29
AspS9I	GGNCC	4 cut(s)	251, 725, 1115, 1124
AsuC2I	CCSGG	1 cut(s)	687
AsuHPI	GGTGA	5 cut(s)	322, 466, 674, 700, 782
AvaII	GGWCC	4 cut(s)	251, 725, 1115, 1124
BamHI	GGATCC	1 cut(s)	1498
BanI	GGYRCC	1 cut(s)	275
BauI	CACGAG	1 cut(s)	108
BbrPI	CACGTG	1 cut(s)	878
BbsI	GAAGAC	1 cut(s)	591
Bbv12I	GWGCWC	2 cut(s)	109, 1145
BbvI	GCAGC	6 cut(s)	1068, 1198, 1288, 1310, 1378, 1400
BccI	CCATC	5 cut(s)	110, 374, 389, 596, 929
BceAI	ACGGC	2 cut(s)	417, 1183
BciT130I	CCWGG	7 cut(s)	237, 429, 729, 864, 948, 1119, 1453
BciVI	GTATCC	2 cut(s)	61, 1486
BclI	TGATCA	1 cut(s)	931
BcnI	CCSGG	1 cut(s)	687
BcoDI	GTCTC	3 cut(s)	679, 758, 767
BfaI	CTAG	2 cut(s)	62, 377
BfmI	CTRYAG	2 cut(s)	281, 1439
BfrI	CTTAAG	1 cut(s)	7
BfuAI	ACCTGC	1 cut(s)	1462
BfuI	GTATCC	2 cut(s)	61, 1486
BisI	GCNGC	8 cut(s)	1057, 1209, 1212, 1299, 1302, 1389, 1392, 1486
BlsI	GCNGC	8 cut(s)	1058, 1210, 1213, 1300, 1303, 1390, 1393, 1487
Bme1390I	CCNGG	8 cut(s)	237, 429, 687, 729, 864, 948, 1119, 1453
Bme18I	GGWCC	4 cut(s)	251, 725, 1115, 1124
BmgT120I	GGNCC	4 cut(s)	251, 725, 1115, 1124
BmiI	GGNNCC	5 cut(s)	222, 252, 277, 373, 1500
BmrFI	CCNGG	8 cut(s)	237, 429, 687, 729, 864, 948, 1119, 1453
BmsI	GCATC	2 cut(s)	233, 980
BpiI	GAAGAC	1 cut(s)	591
BpmI	CTGGAG	1 cut(s)	1140
BpuMI	CCSGG	1 cut(s)	687
Bsa29I	ATCGAT	1 cut(s)	503
BsaAI	YACGTR	1 cut(s)	878
BsaJI	CCNNGG	5 cut(s)	385, 427, 685, 733, 1111
BsaWI	WCCGGW	3 cut(s)	223, 659, 710
BsaXI	ACNNNNNCTCC	2 cut(s)	174, 204
Bsc4I	CCNNNNNNNGG	4 cut(s)	391, 734, 901, 953
Bse118I	RCCGGY	3 cut(s)	659, 710, 1126
BseBI	CCWGG	7 cut(s)	237, 429, 729, 864, 948, 1119, 1453
BseCI	ATCGAT	1 cut(s)	503
BseDI	CCNNGG	5 cut(s)	385, 427, 685, 733, 1111
BseGI	GGATG	3 cut(s)	18, 400, 971
BseLI	CCNNNNNNNGG	4 cut(s)	391, 734, 901, 953
BseMII	CTCAG	1 cut(s)	86
BseRI	GAGGAG	1 cut(s)	195
BseXI	GCAGC	6 cut(s)	1068, 1198, 1288, 1310, 1378, 1400
BsgI	GTGCAG	2 cut(s)	737, 1490
Bsh1236I	CGCG	4 cut(s)	1204, 1294, 1384, 1485
BshFI	GGCC	7 cut(s)	140, 384, 432, 732, 1170, 1260, 1350
BshNI	GGYRCC	1 cut(s)	275
BshTI	ACCGGT	2 cut(s)	659, 710
BshVI	ATCGAT	1 cut(s)	503
BsiHKAI	GWGCWC	2 cut(s)	109, 1145
BsiSI	CCGG	7 cut(s)	224, 660, 687, 711, 1127, 1257, 1347
BslFI	GGGAC	1 cut(s)	264
BslI	CCNNNNNNNGG	4 cut(s)	391, 734, 901, 953
BsmAI	GTCTC	3 cut(s)	679, 758, 767
BsmFI	GGGAC	1 cut(s)	264
BsnI	GGCC	7 cut(s)	140, 384, 432, 732, 1170, 1260, 1350
Bsp1286I	GDGCHC	2 cut(s)	109, 1145
Bsp143I	GATC	5 cut(s)	327, 504, 689, 931, 1498
Bsp19I	CCATGG	1 cut(s)	733
BspANI	GGCC	7 cut(s)	140, 384, 432, 732, 1170, 1260, 1350
BspCNI	CTCAG	1 cut(s)	85
BspDI	ATCGAT	1 cut(s)	503
BspFNI	CGCG	4 cut(s)	1204, 1294, 1384, 1485
BspLI	GGNNCC	5 cut(s)	222, 252, 277, 373, 1500
BspMI	ACCTGC	1 cut(s)	1462
BspPI	GGATC	4 cut(s)	335, 697, 1493, 1506
BspT107I	GGYRCC	1 cut(s)	275
BspTI	CTTAAG	1 cut(s)	7
BsrBI	CCGCTC	2 cut(s)	392, 1208
BsrFI	RCCGGY	3 cut(s)	659, 710, 1126
BssAI	RCCGGY	3 cut(s)	659, 710, 1126
BssECI	CCNNGG	5 cut(s)	385, 427, 685, 733, 1111
BssMI	GATC	5 cut(s)	327, 504, 689, 931, 1498
BssSI	CACGAG	1 cut(s)	108
BssT1I	CCWWGG	1 cut(s)	733
Bst2BI	CACGAG	1 cut(s)	108
Bst2UI	CCWGG	7 cut(s)	237, 429, 729, 864, 948, 1119, 1453
Bst4CI	ACNGT	5 cut(s)	104, 590, 778, 871, 1468
Bst6I	CTCTTC	1 cut(s)	1398
BstAFI	CTTAAG	1 cut(s)	7
BstBAI	YACGTR	1 cut(s)	878
BstC8I	GCNNGC	6 cut(s)	31, 440, 541, 1206, 1296, 1386
BstDEI	CTNAG	6 cut(s)	34, 72, 291, 1240, 1330, 1417
BstDSI	CCRYGG	1 cut(s)	733
BstF5I	GGATG	3 cut(s)	18, 400, 971
BstFNI	CGCG	4 cut(s)	1204, 1294, 1384, 1485
BstHHI	GCGC	1 cut(s)	29
BstKTI	GATC	5 cut(s)	330, 507, 692, 934, 1501
BstMAI	GTCTC	3 cut(s)	679, 758, 767
BstMBI	GATC	5 cut(s)	327, 504, 689, 931, 1498
BstMWI	GCNNNNNNNGC	1 cut(s)	729
BstNI	CCWGG	7 cut(s)	237, 429, 729, 864, 948, 1119, 1453
BstNSI	RCATGY	2 cut(s)	543, 790
BstSCI	CCNGG	8 cut(s)	235, 427, 685, 727, 862, 946, 1117, 1451
BstSFI	CTRYAG	2 cut(s)	281, 1439
BstUI	CGCG	4 cut(s)	1204, 1294, 1384, 1485
BstV1I	GCAGC	6 cut(s)	1068, 1198, 1288, 1310, 1378, 1400
BstV2I	GAAGAC	1 cut(s)	591
BstX2I	RGATCY	1 cut(s)	1498
BstYI	RGATCY	1 cut(s)	1498
Bsu15I	ATCGAT	1 cut(s)	503
BsuI	GTATCC	2 cut(s)	61, 1486
BsuRI	GGCC	7 cut(s)	140, 384, 432, 732, 1170, 1260, 1350
BsuTUI	ATCGAT	1 cut(s)	503
BtgI	CCRYGG	1 cut(s)	733
BtsCI	GGATG	3 cut(s)	18, 400, 971
BtsI	GCAGTG	2 cut(s)	455, 725
BtsIMutI	CAGTG	2 cut(s)	455, 725
BveI	ACCTGC	1 cut(s)	1462
Cac8I	GCNNGC	6 cut(s)	31, 440, 541, 1206, 1296, 1386
CfoI	GCGC	1 cut(s)	29
Cfr10I	RCCGGY	3 cut(s)	659, 710, 1126
Cfr13I	GGNCC	4 cut(s)	251, 725, 1115, 1124
ClaI	ATCGAT	1 cut(s)	503
Csp6I	GTAC	4 cut(s)	276, 551, 680, 816
CspAI	ACCGGT	2 cut(s)	659, 710
CviAII	CATG	6 cut(s)	68, 153, 540, 734, 787, 843
CviQI	GTAC	4 cut(s)	276, 551, 680, 816
DdeI	CTNAG	6 cut(s)	34, 72, 291, 1240, 1330, 1417
DpnI	GATC	5 cut(s)	329, 506, 691, 933, 1500
DpnII	GATC	5 cut(s)	327, 504, 689, 931, 1498
DraI	TTTAAA	3 cut(s)	1194, 1284, 1374
DrdI	GACNNNNNNGTC	1 cut(s)	671
DseDI	GACNNNNNNGTC	1 cut(s)	671
Eam1104I	CTCTTC	1 cut(s)	1398
EarI	CTCTTC	1 cut(s)	1398
EciI	GGCGGA	1 cut(s)	384
Eco130I	CCWWGG	1 cut(s)	733
Eco147I	AGGCCT	1 cut(s)	140
Eco47I	GGWCC	4 cut(s)	251, 725, 1115, 1124
Eco57I	CTGAAG	1 cut(s)	1109
Eco72I	CACGTG	1 cut(s)	878
EcoO109I	RGGNCCY	1 cut(s)	1115
EcoRII	CCWGG	7 cut(s)	235, 427, 727, 862, 946, 1117, 1451
EcoT14I	CCWWGG	1 cut(s)	733
EcoT22I	ATGCAT	1 cut(s)	154
ErhI	CCWWGG	1 cut(s)	733
FaeI	CATG	6 cut(s)	71, 156, 543, 737, 790, 846
FalI	AAGNNNNNCTT	2 cut(s)	1054, 1086
FaqI	GGGAC	1 cut(s)	264
FatI	CATG	6 cut(s)	67, 152, 539, 733, 786, 842
FbaI	TGATCA	1 cut(s)	931
FblI	GTMKAC	2 cut(s)	642, 1438
Fnu4HI	GCNGC	8 cut(s)	1057, 1209, 1212, 1299, 1302, 1389, 1392, 1486
FokI	GGATG	3 cut(s)	5, 407, 958
Fsp4HI	GCNGC	8 cut(s)	1057, 1209, 1212, 1299, 1302, 1389, 1392, 1486
FspBI	CTAG	2 cut(s)	62, 377
GlaI	GCGC	1 cut(s)	28
GluI	GCNGC	8 cut(s)	1057, 1209, 1212, 1299, 1302, 1389, 1392, 1486
GsuI	CTGGAG	1 cut(s)	1140
HaeIII	GGCC	7 cut(s)	140, 384, 432, 732, 1170, 1260, 1350
HapII	CCGG	7 cut(s)	224, 660, 687, 711, 1127, 1257, 1347
HhaI	GCGC	1 cut(s)	29
Hin1II	CATG	6 cut(s)	71, 156, 543, 737, 790, 846
Hin6I	GCGC	1 cut(s)	27
HinP1I	GCGC	1 cut(s)	27
HincII	GTYRAC	1 cut(s)	346
HindII	GTYRAC	1 cut(s)	346
HindIII	AAGCTT	1 cut(s)	10
HinfI	GANTC	5 cut(s)	606, 644, 834, 854, 1456
HpaII	CCGG	7 cut(s)	224, 660, 687, 711, 1127, 1257, 1347
HphI	GGTGA	5 cut(s)	322, 466, 674, 700, 782
Hpy166II	GTNNAC	5 cut(s)	346, 643, 913, 1067, 1439
Hpy188I	TCNGA	6 cut(s)	75, 171, 389, 594, 987, 1112
Hpy188III	TCNNGA	2 cut(s)	581, 935
Hpy8I	GTNNAC	5 cut(s)	346, 643, 913, 1067, 1439
HpyAV	CCTTC	8 cut(s)	72, 151, 1084, 1117, 1148, 1238, 1328, 1415
HpyCH4III	ACNGT	5 cut(s)	104, 590, 778, 871, 1468
HpyCH4IV	ACGT	4 cut(s)	342, 549, 877, 996
HpyCH4V	TGCA	9 cut(s)	152, 246, 438, 539, 543, 718, 804, 1056, 1471
HpyF10VI	GCNNNNNNNGC	1 cut(s)	729
HpyF3I	CTNAG	6 cut(s)	34, 72, 291, 1240, 1330, 1417
HpySE526I	ACGT	4 cut(s)	342, 549, 877, 996
Hsp92II	CATG	6 cut(s)	71, 156, 543, 737, 790, 846
HspAI	GCGC	1 cut(s)	27
KpnI	GGTACC	1 cut(s)	279
Ksp22I	TGATCA	1 cut(s)	931
Kzo9I	GATC	5 cut(s)	327, 504, 689, 931, 1498
LmnI	GCTCC	4 cut(s)	161, 226, 389, 583
Lsp1109I	GCAGC	6 cut(s)	1068, 1198, 1288, 1310, 1378, 1400
LweI	GCATC	2 cut(s)	233, 980
MaeI	CTAG	2 cut(s)	62, 377
MaeII	ACGT	4 cut(s)	342, 549, 877, 996
MaeIII	GTNAC	7 cut(s)	91, 472, 482, 662, 793, 992, 1042
MalI	GATC	5 cut(s)	329, 506, 691, 933, 1500
MbiI	CCGCTC	2 cut(s)	392, 1208
MboI	GATC	5 cut(s)	327, 504, 689, 931, 1498
MboII	GAAGA	4 cut(s)	132, 224, 596, 1415
MflI	RGATCY	1 cut(s)	1498
MhlI	GDGCHC	2 cut(s)	109, 1145
MluCI	AATT	7 cut(s)	97, 267, 650, 738, 1189, 1279, 1369
MlyI	GAGTC	1 cut(s)	638
MmeI	TCCRAC	2 cut(s)	243, 444
Mph1103I	ATGCAT	1 cut(s)	154
MroXI	GAANNNNTTC	1 cut(s)	871
MseI	TTAA	9 cut(s)	8, 147, 312, 780, 906, 1005, 1193, 1283, 1373
MslI	CAYNNNNRTG	2 cut(s)	212, 713
MspA1I	CMGCKG	2 cut(s)	1301, 1391
MspCI	CTTAAG	1 cut(s)	7
MspI	CCGG	7 cut(s)	224, 660, 687, 711, 1127, 1257, 1347
MspR9I	CCNGG	8 cut(s)	237, 429, 687, 729, 864, 948, 1119, 1453
MvaI	CCWGG	7 cut(s)	237, 429, 729, 864, 948, 1119, 1453
MvnI	CGCG	4 cut(s)	1204, 1294, 1384, 1485
MwoI	GCNNNNNNNGC	1 cut(s)	729
NciI	CCSGG	1 cut(s)	687
NcoI	CCATGG	1 cut(s)	733
NdeII	GATC	5 cut(s)	327, 504, 689, 931, 1498
NlaIII	CATG	6 cut(s)	71, 156, 543, 737, 790, 846
NlaIV	GGNNCC	5 cut(s)	222, 252, 277, 373, 1500
NmeAIII	GCCGAG	1 cut(s)	735
NmuCI	GTSAC	4 cut(s)	91, 472, 662, 992
NsiI	ATGCAT	1 cut(s)	154
NspI	RCATGY	2 cut(s)	543, 790
OliI	CACNNNNGTG	2 cut(s)	212, 713
PaeI	GCATGC	1 cut(s)	543
PceI	AGGCCT	1 cut(s)	140
PciI	ACATGT	1 cut(s)	786
PdmI	GAANNNNTTC	1 cut(s)	871
PfeI	GAWTC	4 cut(s)	606, 834, 854, 1456
PflMI	CCANNNNNTGG	1 cut(s)	734
PfoI	TCCNGGA	1 cut(s)	1451
PinAI	ACCGGT	2 cut(s)	659, 710
PkrI	GCNGC	8 cut(s)	1058, 1210, 1213, 1300, 1303, 1390, 1393, 1487
PleI	GAGTC	1 cut(s)	638
PmaCI	CACGTG	1 cut(s)	878
PmlI	CACGTG	1 cut(s)	878
PpsI	GAGTC	1 cut(s)	638
Ppu21I	YACGTR	1 cut(s)	878
PpuMI	RGGWCCY	1 cut(s)	1115
PscI	ACATGT	1 cut(s)	786
PshBI	ATTAAT	2 cut(s)	147, 312
Psp5II	RGGWCCY	1 cut(s)	1115
Psp6I	CCWGG	7 cut(s)	235, 427, 727, 862, 946, 1117, 1451
PspCI	CACGTG	1 cut(s)	878
PspGI	CCWGG	7 cut(s)	235, 427, 727, 862, 946, 1117, 1451
PspN4I	GGNNCC	5 cut(s)	222, 252, 277, 373, 1500
PspPI	GGNCC	4 cut(s)	251, 725, 1115, 1124
PspPPI	RGGWCCY	1 cut(s)	1115
PsuI	RGATCY	1 cut(s)	1498
PvuII	CAGCTG	2 cut(s)	1301, 1391
RsaI	GTAC	4 cut(s)	277, 552, 681, 817
RsaNI	GTAC	4 cut(s)	276, 551, 680, 816
RseI	CAYNNNNRTG	2 cut(s)	212, 713
SaqAI	TTAA	9 cut(s)	8, 147, 312, 780, 906, 1005, 1193, 1283, 1373
SatI	GCNGC	8 cut(s)	1057, 1209, 1212, 1299, 1302, 1389, 1392, 1486
Sau3AI	GATC	5 cut(s)	327, 504, 689, 931, 1498
Sau96I	GGNCC	4 cut(s)	251, 725, 1115, 1124
SchI	GAGTC	1 cut(s)	638
ScrFI	CCNGG	8 cut(s)	237, 429, 687, 729, 864, 948, 1119, 1453
SduI	GDGCHC	2 cut(s)	109, 1145
SfaNI	GCATC	2 cut(s)	233, 980
SfcI	CTRYAG	2 cut(s)	281, 1439
SgrAI	CRCCGGYG	2 cut(s)	659, 710
SinI	GGWCC	4 cut(s)	251, 725, 1115, 1124
SmiI	ATTTAAAT	3 cut(s)	1194, 1284, 1374
SmiMI	CAYNNNNRTG	2 cut(s)	212, 713
SmlI	CTYRAG	1 cut(s)	7
SmoI	CTYRAG	1 cut(s)	7
SphI	GCATGC	1 cut(s)	543
Sse9I	AATT	7 cut(s)	97, 267, 650, 738, 1189, 1279, 1369
SseBI	AGGCCT	1 cut(s)	140
SspI	AATATT	3 cut(s)	316, 358, 941
SspMI	CTAG	2 cut(s)	62, 377
StuI	AGGCCT	1 cut(s)	140
StyD4I	CCNGG	8 cut(s)	235, 427, 685, 727, 862, 946, 1117, 1451
StyI	CCWWGG	1 cut(s)	733
SwaI	ATTTAAAT	3 cut(s)	1194, 1284, 1374
TaaI	ACNGT	5 cut(s)	104, 590, 778, 871, 1468
TaiI	ACGT	4 cut(s)	345, 552, 880, 999
TaqI	TCGA	6 cut(s)	241, 503, 1083, 1187, 1277, 1367
TasI	AATT	7 cut(s)	97, 267, 650, 738, 1189, 1279, 1369
TauI	GCSGC	2 cut(s)	1211, 1488
TfiI	GAWTC	4 cut(s)	606, 834, 854, 1456
Tru1I	TTAA	9 cut(s)	8, 147, 312, 780, 906, 1005, 1193, 1283, 1373
Tru9I	TTAA	9 cut(s)	8, 147, 312, 780, 906, 1005, 1193, 1283, 1373
TscAI	CASTG	2 cut(s)	462, 725
TseFI	GTSAC	4 cut(s)	91, 472, 662, 992
TseI	GCWGC	6 cut(s)	1056, 1211, 1298, 1301, 1388, 1391
Tsp45I	GTSAC	4 cut(s)	91, 472, 662, 992
TspDTI	ATGAA	8 cut(s)	7, 56, 133, 298, 1125, 1236, 1326, 1416
TspGWI	ACGGA	1 cut(s)	667
TspRI	CASTG	2 cut(s)	462, 725
Van91I	CCANNNNNTGG	1 cut(s)	734
Vha464I	CTTAAG	1 cut(s)	7
VpaK11BI	GGWCC	4 cut(s)	251, 725, 1115, 1124
VspI	ATTAAT	2 cut(s)	147, 312
XapI	RAATTY	4 cut(s)	267, 1189, 1279, 1369
XceI	RCATGY	2 cut(s)	543, 790
XmiI	GTMKAC	2 cut(s)	642, 1438
XmnI	GAANNNNTTC	1 cut(s)	871
XspI	CTAG	2 cut(s)	62, 377
Zsp2I	ATGCAT	1 cut(s)	154

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.