Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0002146

Physical Location & Seq

Genomic Coordinates Reverse (-)

80388508 .. 80392748

Gene Structure 4241 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00142280.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1410 bp

ATGGATGGTGGAGTGGTGATCATTGTCGATGGTCAGTTGACCATGGATGGGGACAGTGGTATGTTGGTGGTAGTCAGGCCCTATGGCAAAGGGAGTTTACTGAGAAACTCGGGTAAATTGGGTCTAAGTAGCCTTGGAAATTGGCGTATTGCGGTTATAGTTGAGCCCCTATCGGCTCATGTTCATGCTCAGAGAAGGGTTTTTGATGTGACAAATTACGGTGCTCGTGGAGATGGAAGAACAGATAACAGTAAGGCCTTCATTAATGCATGGAATGGAGCTTGTCAGAACATTGGAGGAGGTATGGTGCTGTTCCCAAGAGGCACATTTGCGGTGGCTCCCGTGGTTCTTCTAGGTCGATGCAAGGGACCAATGGAGTTGGAAATTCAGGGTAACCTACAGGCTTCTAAGGAGGTCAAAGATTTCATTGATATTGACCATTGGATCACCATACAATACGTTGACGGCTTGAATATTAGTGGTGGTGGAACCCTAGATGGCCTCGGAGCCGATGGTTGGGGATATAATGACTGCCTAAAAAACCCAGGCCGTTGCAAGCAACTCCCTGCTACACTGCGGTTGGATTTTGTCACCAAAGGTAACATAAACAACATAACATCGATCAACAGCAAAAACACCCACATCAATCTTTTTGCATGCAAGGACGTACTTATTCGCAACGTCAAGATATCAGCTCCCGATGAGAGTCCCAACACCGATGGAATCCACATTGGCACCTCACAGAACATCTATATCGTAGACTCGCAGATATCCACTGGTGACGATTGTGTCTCCGTCCTCCCCGGATCACAATACATCAATGTCACCGGTGTCCAGTGCGGTCCAGGCCATGGAATTAGCATTGGAAGTCTCGGCAGAGGTGCTGGTGACTCCGTTAATGACATGTATGTAACAAACTGCAGATTTGTGAATACTCAAAATGGTGTGAGAATCAAAACATGGGCTGTGGATTCTAAACCTGGAACTGTATCACGTGTTGCCTTTGGGTACATTGAAATGGTTAATGTGGACAATCCCATCATTATTGATCAAGAATATTGCCCTGGTGGTGGTTGTAATACACAGGCATCCTCCCAAGTTCAGATTAGTGATGTAAAGTTTAATGACATTAGAGGCACTTCCGCTACAAAGGAAGCAGTTACTCTCAAATGCAGCCGAAGTAAACCTTGCCAAAATATCGAGCTGAAGGACATTGACCTAACCTTCCGAGGACCTGGAGGACCGGCGGTTTCATTGTGCTCTAATGTAGAAGGCAGAGCTTACGGCCTACAAAATCCCACATCGAATTTAAAAACACCGCGACCGCGAGTAGCTGCTTACAATGAAATAGAGTATGATAACTTAGAAGGCAGAGCTTACGGTCTACAGAACCCCCGCGACCGCGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00040 ko01100 map00040 map01100

Pfam Domains

Protein Families

Glyco_hydro_28

Protein Analysis

469

Amino Acids

50.31

Weight (kDa)

6.6

Isoelectric Point (pI)

28.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pect-lyase_RHGA_epim	PF12708	68 - 116	6.1e-07	Rhamnogalacturonase A/epimerase, pectate lyase-like
Glyco_hydro_28	PF00295	95 - 424	4.5e-96	Glycosyl hydrolases family 28

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002146)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g12491 FvH4_1g12500 FvH4_3g23740 FvH4_4g28770
malus_domestica	MD03G1196500.v1.1 MD11G1207000.v1.1
prunus_persica	Prupe.4G218900_v2.0.a1 Prupe.4G228600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0100401 RchiOBHm_Chr4g0436881 RchiOBHm_Chr5g0041901 RchiOBHm_Chr5g0041941
rosa_laevigata	RLG00000006489 RLG00000016970 RLG00000016994 RLG00000034104
rosa_multiflora	Rmu_sc0001095.1_g000011 Rmu_sc0001464.1_g000018 Rmu_sc0009443.1_g000011 Rmu_sc0010997.1_g000006
rosa_roxburghii	Rroxscaffold_2G00142280 Rroxscaffold_5G00377950
rosa_rugosa	Rorug02G0087800 Rorug04G0297000 Rorug05G0197100
rosa_samantha	Rh2AG137300 Rh2AG137500 Rh2BG140500 Rh2BG140700 Rh2CG142600 Rh2DG142500 Rh4AG351300 Rh4BG360300 Rh4CG374600 Rh4DG354600 Rh5AG281700 Rh5AG281900 Rh5BG287500 Rh5CG318800 Rh5DG296100 Rh5DG296400
rosa_wichuraiana	Rw0G001350 Rw2G010740 Rw4G030760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	788
AccB1I	GGYRCC	1 cut(s)	734
AccB7I	CCANNNNNTGG	1 cut(s)	851
AccI	GTMKAC	2 cut(s)	759, 1384
AccII	CGCG	4 cut(s)	1321, 1327, 1398, 1404
AclWI	GGATC	2 cut(s)	452, 814
AcsI	RAATTY	2 cut(s)	384, 1306
AcuI	CTGAAG	1 cut(s)	1226
AcvI	CACGTG	1 cut(s)	995
AfaI	GTAC	2 cut(s)	669, 1010
AfiI	CCNNNNNNNGG	4 cut(s)	48, 516, 851, 1070
AflIII	ACRYGT	2 cut(s)	903, 994
AgeI	ACCGGT	1 cut(s)	827
AgsI	TTSAA	2 cut(s)	472, 1016
AjnI	CCWGG	5 cut(s)	544, 844, 979, 1063, 1234
AluBI	AGCT	6 cut(s)	281, 695, 1204, 1280, 1334, 1376
AluI	AGCT	6 cut(s)	281, 695, 1204, 1280, 1334, 1376
Alw21I	GWGCWC	2 cut(s)	226, 1262
Alw26I	GTCTC	2 cut(s)	796, 875
AlwI	GGATC	2 cut(s)	452, 814
Ama87I	CYCGRG	1 cut(s)	109
AoxI	GGCC	6 cut(s)	77, 255, 499, 547, 847, 1285
ApeKI	GCWGC	2 cut(s)	1173, 1334
ApoI	RAATTY	2 cut(s)	384, 1306
AseI	ATTAAT	1 cut(s)	264
AsiGI	ACCGGT	1 cut(s)	827
AspS9I	GGNCC	5 cut(s)	78, 368, 842, 1232, 1241
AsuC2I	CCSGG	1 cut(s)	804
AsuHPI	GGTGA	6 cut(s)	28, 439, 583, 791, 817, 899
AvaI	CYCGRG	1 cut(s)	109
AvaII	GGWCC	4 cut(s)	368, 842, 1232, 1241
BanI	GGYRCC	1 cut(s)	734
BanII	GRGCYC	1 cut(s)	168
BauI	CACGAG	1 cut(s)	225
BbrPI	CACGTG	1 cut(s)	995
Bbv12I	GWGCWC	2 cut(s)	226, 1262
BbvI	GCAGC	2 cut(s)	1185, 1321
BccI	CCATC	7 cut(s)	23, 41, 227, 491, 506, 713, 1046
BceAI	ACGGC	3 cut(s)	481, 534, 1300
BciT130I	CCWGG	5 cut(s)	546, 846, 981, 1065, 1236
BclI	TGATCA	2 cut(s)	18, 1048
BcnI	CCSGG	1 cut(s)	804
BcoDI	GTCTC	2 cut(s)	796, 875
BfaI	CTAG	2 cut(s)	353, 494
BfmI	CTRYAG	3 cut(s)	398, 919, 1385
BisI	GCNGC	2 cut(s)	1174, 1335
BlsI	GCNGC	2 cut(s)	1175, 1336
Bme1390I	CCNGG	6 cut(s)	546, 804, 846, 981, 1065, 1236
Bme18I	GGWCC	4 cut(s)	368, 842, 1232, 1241
BmeT110I	CYCGRG	1 cut(s)	109
BmgT120I	GGNCC	5 cut(s)	78, 368, 842, 1232, 1241
BmiI	GGNNCC	5 cut(s)	339, 369, 490, 508, 736
BmrFI	CCNGG	6 cut(s)	546, 804, 846, 981, 1065, 1236
BmsI	GCATC	2 cut(s)	350, 1097
BpmI	CTGGAG	1 cut(s)	1257
BpuMI	CCSGG	1 cut(s)	804
Bsa29I	ATCGAT	1 cut(s)	620
BsaAI	YACGTR	1 cut(s)	995
BsaJI	CCNNGG	9 cut(s)	42, 133, 342, 502, 544, 802, 850, 1063, 1228
BsaWI	WCCGGW	1 cut(s)	827
BsaXI	ACNNNNNCTCC	2 cut(s)	291, 321
Bsc4I	CCNNNNNNNGG	4 cut(s)	48, 516, 851, 1070
Bse118I	RCCGGY	2 cut(s)	827, 1243
Bse1I	ACTGG	2 cut(s)	781, 835
BseBI	CCWGG	5 cut(s)	546, 846, 981, 1065, 1236
BseCI	ATCGAT	1 cut(s)	620
BseDI	CCNNGG	9 cut(s)	42, 133, 342, 502, 544, 802, 850, 1063, 1228
BseGI	GGATG	3 cut(s)	10, 52, 1088
BseLI	CCNNNNNNNGG	4 cut(s)	48, 516, 851, 1070
BseMII	CTCAG	2 cut(s)	92, 203
BseNI	ACTGG	2 cut(s)	781, 835
BseRI	GAGGAG	1 cut(s)	312
BseXI	GCAGC	2 cut(s)	1185, 1321
Bsh1236I	CGCG	4 cut(s)	1321, 1327, 1398, 1404
Bsh1285I	CGRYCG	2 cut(s)	1325, 1402
BshFI	GGCC	6 cut(s)	79, 257, 501, 549, 849, 1287
BshNI	GGYRCC	1 cut(s)	734
BshTI	ACCGGT	1 cut(s)	827
BshVI	ATCGAT	1 cut(s)	620
BsiEI	CGRYCG	2 cut(s)	1325, 1402
BsiHKAI	GWGCWC	2 cut(s)	226, 1262
BsiHKCI	CYCGRG	1 cut(s)	109
BsiSI	CCGG	3 cut(s)	804, 828, 1244
BslFI	GGGAC	3 cut(s)	65, 381, 693
BslI	CCNNNNNNNGG	4 cut(s)	48, 516, 851, 1070
BsmAI	GTCTC	2 cut(s)	796, 875
BsmFI	GGGAC	3 cut(s)	65, 381, 693
BsnI	GGCC	6 cut(s)	79, 257, 501, 549, 849, 1287
BsoBI	CYCGRG	1 cut(s)	109
Bsp1286I	GDGCHC	3 cut(s)	168, 226, 1262
Bsp143I	GATC	5 cut(s)	18, 444, 621, 806, 1048
Bsp19I	CCATGG	2 cut(s)	42, 850
BspANI	GGCC	6 cut(s)	79, 257, 501, 549, 849, 1287
BspCNI	CTCAG	2 cut(s)	93, 202
BspDI	ATCGAT	1 cut(s)	620
BspFNI	CGCG	4 cut(s)	1321, 1327, 1398, 1404
BspLI	GGNNCC	5 cut(s)	339, 369, 490, 508, 736
BspMAI	CTGCAG	1 cut(s)	923
BspPI	GGATC	2 cut(s)	452, 814
BspT107I	GGYRCC	1 cut(s)	734
BsrFI	RCCGGY	2 cut(s)	827, 1243
BsrI	ACTGG	2 cut(s)	781, 835
BssAI	RCCGGY	2 cut(s)	827, 1243
BssECI	CCNNGG	9 cut(s)	42, 133, 342, 502, 544, 802, 850, 1063, 1228
BssMI	GATC	5 cut(s)	18, 444, 621, 806, 1048
BssSI	CACGAG	1 cut(s)	225
BssT1I	CCWWGG	3 cut(s)	42, 133, 850
Bst2BI	CACGAG	1 cut(s)	225
Bst2UI	CCWGG	5 cut(s)	546, 846, 981, 1065, 1236
Bst4CI	ACNGT	5 cut(s)	56, 221, 251, 988, 1382
BstBAI	YACGTR	1 cut(s)	995
BstC8I	GCNNGC	2 cut(s)	557, 658
BstDEI	CTNAG	5 cut(s)	101, 125, 189, 408, 1363
BstDSI	CCRYGG	3 cut(s)	42, 342, 850
BstEII	GGTNACC	1 cut(s)	392
BstF5I	GGATG	3 cut(s)	10, 52, 1088
BstFNI	CGCG	4 cut(s)	1321, 1327, 1398, 1404
BstKTI	GATC	5 cut(s)	21, 447, 624, 809, 1051
BstMAI	GTCTC	2 cut(s)	796, 875
BstMBI	GATC	5 cut(s)	18, 444, 621, 806, 1048
BstMCI	CGRYCG	2 cut(s)	1325, 1402
BstMWI	GCNNNNNNNGC	1 cut(s)	846
BstNI	CCWGG	5 cut(s)	546, 846, 981, 1065, 1236
BstNSI	RCATGY	2 cut(s)	660, 907
BstPI	GGTNACC	1 cut(s)	392
BstSCI	CCNGG	6 cut(s)	544, 802, 844, 979, 1063, 1234
BstSFI	CTRYAG	3 cut(s)	398, 919, 1385
BstUI	CGCG	4 cut(s)	1321, 1327, 1398, 1404
BstV1I	GCAGC	2 cut(s)	1185, 1321
Bsu15I	ATCGAT	1 cut(s)	620
BsuRI	GGCC	6 cut(s)	79, 257, 501, 549, 849, 1287
BsuTUI	ATCGAT	1 cut(s)	620
BtgI	CCRYGG	3 cut(s)	42, 342, 850
BtsCI	GGATG	3 cut(s)	10, 52, 1088
BtsI	GCAGTG	1 cut(s)	572
BtsIMutI	CAGTG	4 cut(s)	61, 572, 774, 842
Cac8I	GCNNGC	2 cut(s)	557, 658
Cfr10I	RCCGGY	2 cut(s)	827, 1243
Cfr13I	GGNCC	5 cut(s)	78, 368, 842, 1232, 1241
ClaI	ATCGAT	1 cut(s)	620
Csp6I	GTAC	2 cut(s)	668, 1009
CspAI	ACCGGT	1 cut(s)	827
CviAII	CATG	8 cut(s)	43, 179, 185, 270, 657, 851, 904, 960
CviQI	GTAC	2 cut(s)	668, 1009
DdeI	CTNAG	5 cut(s)	101, 125, 189, 408, 1363
DpnI	GATC	5 cut(s)	20, 446, 623, 808, 1050
DpnII	GATC	5 cut(s)	18, 444, 621, 806, 1048
DraI	TTTAAA	1 cut(s)	1311
DrdI	GACNNNNNNGTC	1 cut(s)	788
DseDI	GACNNNNNNGTC	1 cut(s)	788
Eco130I	CCWWGG	3 cut(s)	42, 133, 850
Eco147I	AGGCCT	1 cut(s)	257
Eco24I	GRGCYC	1 cut(s)	168
Eco32I	GATATC	2 cut(s)	690, 771
Eco47I	GGWCC	4 cut(s)	368, 842, 1232, 1241
Eco57I	CTGAAG	1 cut(s)	1226
Eco72I	CACGTG	1 cut(s)	995
Eco88I	CYCGRG	1 cut(s)	109
Eco91I	GGTNACC	1 cut(s)	392
EcoO109I	RGGNCCY	2 cut(s)	78, 1232
EcoO65I	GGTNACC	1 cut(s)	392
EcoRII	CCWGG	5 cut(s)	544, 844, 979, 1063, 1234
EcoRV	GATATC	2 cut(s)	690, 771
EcoT14I	CCWWGG	3 cut(s)	42, 133, 850
EcoT22I	ATGCAT	1 cut(s)	271
EcoT38I	GRGCYC	1 cut(s)	168
ErhI	CCWWGG	3 cut(s)	42, 133, 850
FaeI	CATG	8 cut(s)	46, 182, 188, 273, 660, 854, 907, 963
FalI	AAGNNNNNCTT	2 cut(s)	1171, 1203
FaqI	GGGAC	3 cut(s)	65, 381, 693
FatI	CATG	8 cut(s)	42, 178, 184, 269, 656, 850, 903, 959
FauI	CCCGC	1 cut(s)	1403
FbaI	TGATCA	2 cut(s)	18, 1048
FblI	GTMKAC	2 cut(s)	759, 1384
Fnu4HI	GCNGC	2 cut(s)	1174, 1335
FokI	GGATG	3 cut(s)	17, 59, 1075
FriOI	GRGCYC	1 cut(s)	168
Fsp4HI	GCNGC	2 cut(s)	1174, 1335
FspBI	CTAG	2 cut(s)	353, 494
GluI	GCNGC	2 cut(s)	1174, 1335
GsuI	CTGGAG	1 cut(s)	1257
HaeIII	GGCC	6 cut(s)	79, 257, 501, 549, 849, 1287
HapII	CCGG	3 cut(s)	804, 828, 1244
Hin1II	CATG	8 cut(s)	46, 182, 188, 273, 660, 854, 907, 963
HincII	GTYRAC	2 cut(s)	39, 463
HindII	GTYRAC	2 cut(s)	39, 463
HinfI	GANTC	6 cut(s)	706, 723, 761, 890, 951, 971
HpaII	CCGG	3 cut(s)	804, 828, 1244
HphI	GGTGA	6 cut(s)	28, 439, 583, 791, 817, 899
Hpy166II	GTNNAC	7 cut(s)	39, 98, 463, 760, 1030, 1184, 1385
Hpy188I	TCNGA	5 cut(s)	192, 288, 506, 1104, 1229
Hpy188III	TCNNGA	3 cut(s)	685, 698, 1052
Hpy8I	GTNNAC	7 cut(s)	39, 98, 463, 760, 1030, 1184, 1385
HpyAV	CCTTC	6 cut(s)	189, 268, 1201, 1234, 1265, 1361
HpyCH4III	ACNGT	5 cut(s)	56, 221, 251, 988, 1382
HpyCH4IV	ACGT	4 cut(s)	459, 666, 681, 994
HpyCH4V	TGCA	7 cut(s)	269, 363, 555, 656, 660, 921, 1173
HpyF10VI	GCNNNNNNNGC	1 cut(s)	846
HpyF3I	CTNAG	5 cut(s)	101, 125, 189, 408, 1363
HpySE526I	ACGT	4 cut(s)	459, 666, 681, 994
Hsp92II	CATG	8 cut(s)	46, 182, 188, 273, 660, 854, 907, 963
Ksp22I	TGATCA	2 cut(s)	18, 1048
Kzo9I	GATC	5 cut(s)	18, 444, 621, 806, 1048
LmnI	GCTCC	4 cut(s)	278, 343, 506, 700
Lsp1109I	GCAGC	2 cut(s)	1185, 1321
LweI	GCATC	2 cut(s)	350, 1097
MaeI	CTAG	2 cut(s)	353, 494
MaeII	ACGT	4 cut(s)	459, 666, 681, 994
MaeIII	GTNAC	9 cut(s)	208, 392, 589, 599, 779, 823, 887, 910, 1159
MalI	GATC	5 cut(s)	20, 446, 623, 808, 1050
MboI	GATC	5 cut(s)	18, 444, 621, 806, 1048
MboII	GAAGA	2 cut(s)	249, 341
MhlI	GDGCHC	3 cut(s)	168, 226, 1262
MluCI	AATT	6 cut(s)	116, 139, 214, 384, 855, 1306
MlyI	GAGTC	3 cut(s)	715, 755, 884
MmeI	TCCRAC	2 cut(s)	360, 561
Mph1103I	ATGCAT	1 cut(s)	271
MseI	TTAA	5 cut(s)	264, 897, 1023, 1122, 1310
MslI	CAYNNNNRTG	2 cut(s)	183, 1016
MspI	CCGG	3 cut(s)	804, 828, 1244
MspR9I	CCNGG	6 cut(s)	546, 804, 846, 981, 1065, 1236
MvaI	CCWGG	5 cut(s)	546, 846, 981, 1065, 1236
MvnI	CGCG	4 cut(s)	1321, 1327, 1398, 1404
MwoI	GCNNNNNNNGC	1 cut(s)	846
NciI	CCSGG	1 cut(s)	804
NcoI	CCATGG	2 cut(s)	42, 850
NdeII	GATC	5 cut(s)	18, 444, 621, 806, 1048
NlaIII	CATG	8 cut(s)	46, 182, 188, 273, 660, 854, 907, 963
NlaIV	GGNNCC	5 cut(s)	339, 369, 490, 508, 736
NmeAIII	GCCGAG	1 cut(s)	852
NmuCI	GTSAC	5 cut(s)	208, 589, 779, 823, 887
NsiI	ATGCAT	1 cut(s)	271
NspI	RCATGY	2 cut(s)	660, 907
PaeI	GCATGC	1 cut(s)	660
PceI	AGGCCT	1 cut(s)	257
PciI	ACATGT	1 cut(s)	903
PfeI	GAWTC	3 cut(s)	723, 951, 971
PflMI	CCANNNNNTGG	1 cut(s)	851
PinAI	ACCGGT	1 cut(s)	827
PkrI	GCNGC	2 cut(s)	1175, 1336
PleI	GAGTC	3 cut(s)	714, 755, 884
PmaCI	CACGTG	1 cut(s)	995
PmlI	CACGTG	1 cut(s)	995
PpsI	GAGTC	3 cut(s)	714, 755, 884
Ppu21I	YACGTR	1 cut(s)	995
PpuMI	RGGWCCY	1 cut(s)	1232
PscI	ACATGT	1 cut(s)	903
PshBI	ATTAAT	1 cut(s)	264
Psp5II	RGGWCCY	1 cut(s)	1232
Psp6I	CCWGG	5 cut(s)	544, 844, 979, 1063, 1234
PspCI	CACGTG	1 cut(s)	995
PspEI	GGTNACC	1 cut(s)	392
PspGI	CCWGG	5 cut(s)	544, 844, 979, 1063, 1234
PspN4I	GGNNCC	5 cut(s)	339, 369, 490, 508, 736
PspPI	GGNCC	5 cut(s)	78, 368, 842, 1232, 1241
PspPPI	RGGWCCY	1 cut(s)	1232
PstI	CTGCAG	1 cut(s)	923
RsaI	GTAC	2 cut(s)	669, 1010
RsaNI	GTAC	2 cut(s)	668, 1009
RseI	CAYNNNNRTG	2 cut(s)	183, 1016
SaqAI	TTAA	5 cut(s)	264, 897, 1023, 1122, 1310
SatI	GCNGC	2 cut(s)	1174, 1335
Sau3AI	GATC	5 cut(s)	18, 444, 621, 806, 1048
Sau96I	GGNCC	5 cut(s)	78, 368, 842, 1232, 1241
SchI	GAGTC	3 cut(s)	715, 755, 884
ScrFI	CCNGG	6 cut(s)	546, 804, 846, 981, 1065, 1236
SduI	GDGCHC	3 cut(s)	168, 226, 1262
SfaNI	GCATC	2 cut(s)	350, 1097
SfcI	CTRYAG	3 cut(s)	398, 919, 1385
SgrAI	CRCCGGYG	1 cut(s)	827
SinI	GGWCC	4 cut(s)	368, 842, 1232, 1241
SmiMI	CAYNNNNRTG	2 cut(s)	183, 1016
SphI	GCATGC	1 cut(s)	660
Sse9I	AATT	6 cut(s)	116, 139, 214, 384, 855, 1306
SseBI	AGGCCT	1 cut(s)	257
SspI	AATATT	2 cut(s)	475, 1058
SspMI	CTAG	2 cut(s)	353, 494
StuI	AGGCCT	1 cut(s)	257
StyD4I	CCNGG	6 cut(s)	544, 802, 844, 979, 1063, 1234
StyI	CCWWGG	3 cut(s)	42, 133, 850
TaaI	ACNGT	5 cut(s)	56, 221, 251, 988, 1382
TaiI	ACGT	4 cut(s)	462, 669, 684, 997
TaqI	TCGA	5 cut(s)	27, 358, 620, 1200, 1304
TasI	AATT	6 cut(s)	116, 139, 214, 384, 855, 1306
TfiI	GAWTC	3 cut(s)	723, 951, 971
Tru1I	TTAA	5 cut(s)	264, 897, 1023, 1122, 1310
Tru9I	TTAA	5 cut(s)	264, 897, 1023, 1122, 1310
TscAI	CASTG	4 cut(s)	61, 579, 781, 842
TseFI	GTSAC	5 cut(s)	208, 589, 779, 823, 887
TseI	GCWGC	2 cut(s)	1173, 1334
Tsp45I	GTSAC	5 cut(s)	208, 589, 779, 823, 887
TspDTI	ATGAA	5 cut(s)	173, 250, 415, 1242, 1359
TspGWI	ACGGA	2 cut(s)	784, 883
TspRI	CASTG	4 cut(s)	61, 579, 781, 842
Van91I	CCANNNNNTGG	1 cut(s)	851
VpaK11BI	GGWCC	4 cut(s)	368, 842, 1232, 1241
VspI	ATTAAT	1 cut(s)	264
XapI	RAATTY	2 cut(s)	384, 1306
XceI	RCATGY	2 cut(s)	660, 907
XmiI	GTMKAC	2 cut(s)	759, 1384
XspI	CTAG	2 cut(s)	353, 494
Zsp2I	ATGCAT	1 cut(s)	271

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.