RLG00000024629

L-type lectin-domain containing receptor kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
Physical Location & Seq
Reverse (-)
37594754 .. 37597599
2846 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000024629

Sequence Viewer

Length: 1449 bp
ATGGCAGATCCTCTGATATTGTTCTGTGCTCTTCTTCTGTTCTCAATACGAGTTTCATCTCAGGTCAGTGAGCTCTTCTTTCCTGGTTTTAAACATGTGGGCACTAACCTAACCTTTAAAGGGATAGCTGAGTTTGAAAATATTGGCATTCTCAAATTGACCAATGACACCAGCAGATTATTGGGTCATGCTTTTTACACTTTCCCAATTCGATTCAAAAACTCCACAAATGGCAAAGCCTTCTCTTTCTCCACCTCAGTTGCTTTCACTATAGTTCTTGAGTATCCAAAGCTCGCTGGCCATGGCGTTGCTTTCACAAGCGCCCCATCGAAGGATCTCAATTCTCTGCCTAGTCAATATCTAGGTGTCTTCAATGGCAGTGATTTTGGCAACTCCTCCACACACATCTTTGCCATCGAATTCGACACAGTTCAAGACTTGGAATTTGGAGATATTAATGACAATCATGTAGGGATCGGCTCACCAAATAAGAGGAAGGGCCAAACTTGTAACTATGCGAATTCTGACGTTGGAGTCAATCTTCTATGGCTCTCTACCTGCACAACATATTCCTTGTACAGAAACTTCCAGACAGCCCAGAATTCCAATCCCACCAACCTCGTTCAAACCCTTTGTTTCTGCAACTGTGTGGATCCAAATGCTTTGAAGGTTGCACCTGACATGGCAGATCCTCTGATATTATTCTGTGCTCTTCTTCTGCTTTCAATACCAGTTTCATCTCAGATTATTGGGTCATGCTTTGTACAGTTCCCCAATTCGATTCAAAAACTCACAAATGGCAAAGCCTTCTCTTTCTCCACCTCATTTGCCGTCACTATAGTTCCTGAGTATCCAAAGCTCGGCGGCCATGGCTTTGCATTCACAATCGCCCCATCGAAGGATCTCAATTCTCTGCCTAGTCAATATCTAGGGATCGACCTCAACAGCTTGAAATCAAACGCCTCAGCTGAAGCTGCATATTACACAGATGCTACAACAAAACAAAACTTCAACCTCAAGAGTGGAAAAGCAATCCAAGCCTGGATAGACTATGATTCAGCTCAAAATGTAATCAATGTCACAATCTCACCACGCTCTTCCAAACCCAAAACCCCACTTATTTCTTTCCACGTAGATCTCTCCCTGATTTTCGAAGAGTTCATGTATGTTGGGTTCTCAGCTTCAACAGTTATGCTTGCCAGCTCCCACTACATTCTGGGCTGGAGCTTCAAGATTGATGGACAGTCTCAACCCCTTCATCTGGCCTCTCTTCCTAAAATTTCAATACCCAGAAAAGATCACACAACTCTGAAAATCGGAGTCTCAGTCGCAGCCATTGCTCTCACTCTATTTGTAATCTCCATATCCATCTACTTATTCATCAGGAAGCTGAAGAACGCCAAGCCAATGGAGTCATGGGAGCTCAAGCTTGGCTCACACAGATGTTAA

Protein Analysis

483

Amino Acids

52.78

Weight (kDa)

8.58

Isoelectric Point (pI)

25.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lectin_legB PF00139 26 - 160 1.6e-34 Legume lectin domain
Lectin_legB PF00139 250 - 312 9e-09 Legume lectin domain
Lectin_legB PF00139 306 - 424 1.1e-30 Legume lectin domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 533
Acc36I ACCTGC 1 cut(s) 566
AciI CCGC 1 cut(s) 864
AclWI GGATC 8 cut(s) 2, 342, 482, 647, 660, 683, 909, 941
AcoI YGGCCR 2 cut(s) 298, 865
AcsI RAATTY 5 cut(s) 419, 443, 520, 601, 1278
AcuI CTGAAG 2 cut(s) 990, 1412
AfaI GTAC 2 cut(s) 578, 765
AfiI CCNNNNNNNGG 5 cut(s) 120, 331, 860, 898, 1261
AflIII ACRYGT 1 cut(s) 94
AjnI CCWGG 2 cut(s) 82, 1040
Alw21I GWGCWC 4 cut(s) 31, 75, 712, 1425
Alw26I GTCTC 2 cut(s) 1251, 1327
AlwI GGATC 8 cut(s) 2, 342, 482, 647, 660, 683, 909, 941
AoxI GGCC 4 cut(s) 298, 499, 865, 1263
ApeKI GCWGC 2 cut(s) 974, 1331
ApoI RAATTY 5 cut(s) 419, 443, 520, 601, 1278
ArsI GACNNNNNNTTYG 2 cut(s) 428, 460
AseI ATTAAT 1 cut(s) 456
AspLEI GCGC 1 cut(s) 323
AspS9I GGNCC 1 cut(s) 499
AsuHPI GGTGA 2 cut(s) 474, 1080
AsuII TTCGAA 1 cut(s) 1152
BaeGI GKGCMC 1 cut(s) 104
BalI TGGCCA 1 cut(s) 300
BamHI GGATCC 1 cut(s) 652
BanII GRGCYC 2 cut(s) 75, 1425
BarI GAAGNNNNNNTAC 2 cut(s) 569, 601
BbsI GAAGAC 1 cut(s) 361
Bbv12I GWGCWC 4 cut(s) 31, 75, 712, 1425
BbvCI CCTCAGC 1 cut(s) 964
BbvI GCAGC 2 cut(s) 961, 1343
BccI CCATC 5 cut(s) 334, 422, 901, 1232, 1376
BceAI ACGGC 1 cut(s) 815
BciT130I CCWGG 2 cut(s) 84, 1042
BciVI GTATCC 2 cut(s) 294, 861
BcoDI GTCTC 2 cut(s) 1251, 1327
BfaI CTAG 4 cut(s) 351, 362, 918, 929
BfmI CTRYAG 2 cut(s) 270, 837
BfoI RGCGCY 1 cut(s) 324
BfuAI ACCTGC 1 cut(s) 566
BfuI GTATCC 2 cut(s) 294, 861
BglII AGATCT 1 cut(s) 1135
BisI GCNGC 3 cut(s) 865, 975, 1332
BlsI GCNGC 3 cut(s) 866, 976, 1333
Bme1390I CCNGG 2 cut(s) 84, 1042
BmgT120I GGNCC 1 cut(s) 499
BmiI GGNNCC 1 cut(s) 654
BmrFI CCNGG 2 cut(s) 84, 1042
BmsI GCATC 1 cut(s) 979
BpiI GAAGAC 1 cut(s) 361
BpmI CTGGAG 1 cut(s) 1243
Bpu10I CCTNAGC 1 cut(s) 964
Bpu14I TTCGAA 1 cut(s) 1152
BpuEI CTTGAG 3 cut(s) 299, 1001, 1409
BsaAI YACGTR 1 cut(s) 1132
BsaJI CCNNGG 2 cut(s) 301, 868
BsaXI ACNNNNNCTCC 2 cut(s) 1311, 1341
Bsc4I CCNNNNNNNGG 5 cut(s) 120, 331, 860, 898, 1261
Bse1I ACTGG 1 cut(s) 731
Bse3DI GCAATG 1 cut(s) 1335
BseBI CCWGG 2 cut(s) 84, 1042
BseDI CCNNGG 2 cut(s) 301, 868
BseLI CCNNNNNNNGG 5 cut(s) 120, 331, 860, 898, 1261
BseMI GCAATG 1 cut(s) 1335
BseMII CTCAG 8 cut(s) 74, 120, 270, 755, 837, 978, 1191, 1338
BseNI ACTGG 1 cut(s) 731
BseRI GAGGAG 1 cut(s) 385
BseSI GKGCMC 1 cut(s) 104
BseXI GCAGC 2 cut(s) 961, 1343
BsgI GTGCAG 1 cut(s) 544
BshFI GGCC 4 cut(s) 300, 501, 867, 1265
BsiHKAI GWGCWC 4 cut(s) 31, 75, 712, 1425
BslI CCNNNNNNNGG 5 cut(s) 120, 331, 860, 898, 1261
BsmAI GTCTC 2 cut(s) 1251, 1327
BsmI GAATGC 2 cut(s) 147, 878
BsnI GGCC 4 cut(s) 300, 501, 867, 1265
Bsp119I TTCGAA 1 cut(s) 1152
Bsp1286I GDGCHC 5 cut(s) 31, 75, 104, 712, 1425
Bsp1407I TGTACA 2 cut(s) 576, 763
Bsp143I GATC 9 cut(s) 7, 334, 474, 652, 688, 901, 933, 1135, 1297
Bsp19I CCATGG 2 cut(s) 301, 868
BspACI CCGC 1 cut(s) 864
BspANI GGCC 4 cut(s) 300, 501, 867, 1265
BspCNI CTCAG 8 cut(s) 73, 121, 269, 754, 838, 977, 1190, 1337
BspLI GGNNCC 1 cut(s) 654
BspMI ACCTGC 1 cut(s) 566
BspPI GGATC 8 cut(s) 2, 342, 482, 647, 660, 683, 909, 941
BspQI GCTCTTC 4 cut(s) 36, 80, 717, 1102
BspT104I TTCGAA 1 cut(s) 1152
BsrDI GCAATG 1 cut(s) 1335
BsrGI TGTACA 2 cut(s) 576, 763
BsrI ACTGG 1 cut(s) 731
BssECI CCNNGG 2 cut(s) 301, 868
BssMI GATC 9 cut(s) 7, 334, 474, 652, 688, 901, 933, 1135, 1297
BssT1I CCWWGG 2 cut(s) 301, 868
Bst2UI CCWGG 2 cut(s) 84, 1042
Bst4CI ACNGT 5 cut(s) 430, 647, 768, 1189, 1245
Bst6I CTCTTC 6 cut(s) 36, 80, 717, 1102, 1149, 1275
BstAPI GCANNNNNTGC 1 cut(s) 1337
BstAUI TGTACA 2 cut(s) 576, 763
BstBAI YACGTR 1 cut(s) 1132
BstBI TTCGAA 1 cut(s) 1152
BstC8I GCNNGC 4 cut(s) 294, 298, 1197, 1201
BstDEI CTNAG 8 cut(s) 60, 129, 256, 741, 846, 964, 1177, 1324
BstDSI CCRYGG 2 cut(s) 301, 868
BstH2I RGCGCY 1 cut(s) 324
BstHHI GCGC 1 cut(s) 323
BstKTI GATC 9 cut(s) 10, 337, 477, 655, 691, 904, 936, 1138, 1300
BstMAI GTCTC 2 cut(s) 1251, 1327
BstMBI GATC 9 cut(s) 7, 334, 474, 652, 688, 901, 933, 1135, 1297
BstMWI GCNNNNNNNGC 4 cut(s) 870, 974, 1037, 1337
BstNI CCWGG 2 cut(s) 84, 1042
BstNSI RCATGY 1 cut(s) 98
BstSCI CCNGG 2 cut(s) 82, 1040
BstSFI CTRYAG 2 cut(s) 270, 837
BstSLI GKGCMC 1 cut(s) 104
BstV1I GCAGC 2 cut(s) 961, 1343
BstV2I GAAGAC 1 cut(s) 361
BstX2I RGATCY 6 cut(s) 7, 334, 652, 688, 901, 1135
BstXI CCANNNNNNTGG 1 cut(s) 1408
BstYI RGATCY 6 cut(s) 7, 334, 652, 688, 901, 1135
BsuI GTATCC 2 cut(s) 294, 861
BsuRI GGCC 4 cut(s) 300, 501, 867, 1265
BtgI CCRYGG 2 cut(s) 301, 868
BtsI GCAGTG 1 cut(s) 385
BtsIMutI CAGTG 2 cut(s) 73, 385
BveI ACCTGC 1 cut(s) 566
Cac8I GCNNGC 4 cut(s) 294, 298, 1197, 1201
CfoI GCGC 1 cut(s) 323
Cfr13I GGNCC 1 cut(s) 499
Csp6I GTAC 2 cut(s) 577, 764
CspCI CAANNNNNGTGG 4 cut(s) 241, 276, 808, 843
CviAII CATG 9 cut(s) 95, 188, 302, 467, 682, 756, 869, 1162, 1416
CviQI GTAC 2 cut(s) 577, 764
DdeI CTNAG 8 cut(s) 60, 129, 256, 741, 846, 964, 1177, 1324
DpnI GATC 9 cut(s) 9, 336, 476, 654, 690, 903, 935, 1137, 1299
DpnII GATC 9 cut(s) 7, 334, 474, 652, 688, 901, 933, 1135, 1297
DraI TTTAAA 2 cut(s) 91, 118
DrdI GACNNNNNNGTC 1 cut(s) 533
DseDI GACNNNNNNGTC 1 cut(s) 533
EaeI YGGCCR 2 cut(s) 298, 865
Eam1104I CTCTTC 6 cut(s) 36, 80, 717, 1102, 1149, 1275
EarI CTCTTC 6 cut(s) 36, 80, 717, 1102, 1149, 1275
Ecl136II GAGCTC 2 cut(s) 73, 1423
Eco130I CCWWGG 2 cut(s) 301, 868
Eco24I GRGCYC 2 cut(s) 75, 1425
Eco53kI GAGCTC 2 cut(s) 73, 1423
Eco57I CTGAAG 2 cut(s) 990, 1412
EcoICRI GAGCTC 2 cut(s) 73, 1423
EcoRI GAATTC 3 cut(s) 419, 520, 601
EcoRII CCWGG 2 cut(s) 82, 1040
EcoT14I CCWWGG 2 cut(s) 301, 868
EcoT38I GRGCYC 2 cut(s) 75, 1425
ErhI CCWWGG 2 cut(s) 301, 868
FaeI CATG 9 cut(s) 98, 191, 305, 470, 685, 759, 872, 1165, 1419
FatI CATG 9 cut(s) 94, 187, 301, 466, 681, 755, 868, 1161, 1415
Fnu4HI GCNGC 3 cut(s) 865, 975, 1332
FriOI GRGCYC 2 cut(s) 75, 1425
Fsp4HI GCNGC 3 cut(s) 865, 975, 1332
FspBI CTAG 4 cut(s) 351, 362, 918, 929
GlaI GCGC 1 cut(s) 322
GluI GCNGC 3 cut(s) 865, 975, 1332
GsuI CTGGAG 1 cut(s) 1243
HaeII RGCGCY 1 cut(s) 324
HaeIII GGCC 4 cut(s) 300, 501, 867, 1265
HhaI GCGC 1 cut(s) 323
Hin1II CATG 9 cut(s) 98, 191, 305, 470, 685, 759, 872, 1165, 1419
Hin6I GCGC 1 cut(s) 321
HinP1I GCGC 1 cut(s) 321
HindIII AAGCTT 1 cut(s) 1427
HinfI GANTC 6 cut(s) 213, 534, 781, 1055, 1320, 1412
HphI GGTGA 2 cut(s) 474, 1080
Hpy188I TCNGA 6 cut(s) 15, 526, 696, 744, 1311, 1319
Hpy188III TCNNGA 7 cut(s) 278, 434, 589, 845, 1018, 1231, 1384
HpyAV CCTTC 7 cut(s) 250, 325, 490, 661, 817, 892, 1265
HpyCH4III ACNGT 5 cut(s) 430, 647, 768, 1189, 1245
HpyCH4IV ACGT 2 cut(s) 528, 1131
HpyCH4V TGCA 5 cut(s) 561, 642, 674, 878, 977
HpyF10VI GCNNNNNNNGC 4 cut(s) 870, 974, 1037, 1337
HpyF3I CTNAG 8 cut(s) 60, 129, 256, 741, 846, 964, 1177, 1324
HpySE526I ACGT 2 cut(s) 528, 1131
Hsp92II CATG 9 cut(s) 98, 191, 305, 470, 685, 759, 872, 1165, 1419
HspAI GCGC 1 cut(s) 321
Kzo9I GATC 9 cut(s) 7, 334, 474, 652, 688, 901, 933, 1135, 1297
LguI GCTCTTC 4 cut(s) 36, 80, 717, 1102
LmnI GCTCC 3 cut(s) 1208, 1224, 1420
Lsp1109I GCAGC 2 cut(s) 961, 1343
LweI GCATC 1 cut(s) 979
MaeI CTAG 4 cut(s) 351, 362, 918, 929
MaeII ACGT 2 cut(s) 528, 1131
MaeIII GTNAC 3 cut(s) 509, 832, 1078
MalI GATC 9 cut(s) 9, 336, 476, 654, 690, 903, 935, 1137, 1299
MboI GATC 9 cut(s) 7, 334, 474, 652, 688, 901, 933, 1135, 1297
MflI RGATCY 6 cut(s) 7, 334, 652, 688, 901, 1135
MhlI GDGCHC 5 cut(s) 31, 75, 104, 712, 1425
MlsI TGGCCA 1 cut(s) 300
MluNI TGGCCA 1 cut(s) 300
MlyI GAGTC 3 cut(s) 543, 1329, 1421
MmeI TCCRAC 1 cut(s) 511
Mox20I TGGCCA 1 cut(s) 300
MscI TGGCCA 1 cut(s) 300
MseI TTAA 4 cut(s) 90, 117, 456, 1447
MslI CAYNNNNRTG 1 cut(s) 1441
Msp20I TGGCCA 1 cut(s) 300
MspA1I CMGCKG 1 cut(s) 968
MspR9I CCNGG 2 cut(s) 84, 1042
Mva1269I GAATGC 2 cut(s) 147, 878
MvaI CCWGG 2 cut(s) 84, 1042
MwoI GCNNNNNNNGC 4 cut(s) 870, 974, 1037, 1337
NcoI CCATGG 2 cut(s) 301, 868
NdeII GATC 9 cut(s) 7, 334, 474, 652, 688, 901, 933, 1135, 1297
NlaIII CATG 9 cut(s) 98, 191, 305, 470, 685, 759, 872, 1165, 1419
NlaIV GGNNCC 1 cut(s) 654
NmeAIII GCCGAG 1 cut(s) 840
NmuCI GTSAC 2 cut(s) 832, 1078
NspI RCATGY 1 cut(s) 98
NspV TTCGAA 1 cut(s) 1152
PciI ACATGT 1 cut(s) 94
PciSI GCTCTTC 4 cut(s) 36, 80, 717, 1102
PctI GAATGC 2 cut(s) 147, 878
PfeI GAWTC 3 cut(s) 213, 781, 1055
PkrI GCNGC 3 cut(s) 866, 976, 1333
PleI GAGTC 3 cut(s) 542, 1328, 1420
PpsI GAGTC 3 cut(s) 542, 1328, 1420
Ppu21I YACGTR 1 cut(s) 1132
PscI ACATGT 1 cut(s) 94
PshBI ATTAAT 1 cut(s) 456
Psp124BI GAGCTC 2 cut(s) 75, 1425
Psp6I CCWGG 2 cut(s) 82, 1040
PspGI CCWGG 2 cut(s) 82, 1040
PspN4I GGNNCC 1 cut(s) 654
PspPI GGNCC 1 cut(s) 499
PsrI GAACNNNNNNTAC 2 cut(s) 1157, 1189
PsuI RGATCY 6 cut(s) 7, 334, 652, 688, 901, 1135
PvuII CAGCTG 1 cut(s) 968
RsaI GTAC 2 cut(s) 578, 765
RsaNI GTAC 2 cut(s) 577, 764
RseI CAYNNNNRTG 1 cut(s) 1441
SacI GAGCTC 2 cut(s) 75, 1425
SapI GCTCTTC 4 cut(s) 36, 80, 717, 1102
SaqAI TTAA 4 cut(s) 90, 117, 456, 1447
SatI GCNGC 3 cut(s) 865, 975, 1332
Sau3AI GATC 9 cut(s) 7, 334, 474, 652, 688, 901, 933, 1135, 1297
Sau96I GGNCC 1 cut(s) 499
SchI GAGTC 3 cut(s) 543, 1329, 1421
ScrFI CCNGG 2 cut(s) 84, 1042
SduI GDGCHC 5 cut(s) 31, 75, 104, 712, 1425
SfaNI GCATC 1 cut(s) 979
SfcI CTRYAG 2 cut(s) 270, 837
SfuI TTCGAA 1 cut(s) 1152
SmiMI CAYNNNNRTG 1 cut(s) 1441
SmlI CTYRAG 3 cut(s) 278, 1016, 1424
SmoI CTYRAG 3 cut(s) 278, 1016, 1424
SsiI CCGC 1 cut(s) 864
SspI AATATT 1 cut(s) 142
SspMI CTAG 4 cut(s) 351, 362, 918, 929
SstI GAGCTC 2 cut(s) 75, 1425
StyD4I CCNGG 2 cut(s) 82, 1040
StyI CCWWGG 2 cut(s) 301, 868
TaaI ACNGT 5 cut(s) 430, 647, 768, 1189, 1245
TaiI ACGT 2 cut(s) 531, 1134
TaqI TCGA 8 cut(s) 211, 329, 417, 423, 779, 896, 936, 1152
TatI WGTACW 2 cut(s) 576, 763
TauI GCSGC 1 cut(s) 867
TfiI GAWTC 3 cut(s) 213, 781, 1055
Tru1I TTAA 4 cut(s) 90, 117, 456, 1447
Tru9I TTAA 4 cut(s) 90, 117, 456, 1447
TscAI CASTG 2 cut(s) 73, 385
TseFI GTSAC 2 cut(s) 832, 1078
TseI GCWGC 2 cut(s) 974, 1331
Tsp45I GTSAC 2 cut(s) 832, 1078
TspDTI ATGAA 5 cut(s) 45, 726, 1150, 1247, 1369
TspRI CASTG 2 cut(s) 73, 385
VspI ATTAAT 1 cut(s) 456
XapI RAATTY 5 cut(s) 419, 443, 520, 601, 1278
XceI RCATGY 1 cut(s) 98
XcmI CCANNNNNNNNNTGG 2 cut(s) 178, 1413
XspI CTAG 4 cut(s) 351, 362, 918, 929
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.