Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0001385

Physical Location & Seq

Genomic Coordinates Forward (+)

11474636 .. 11476669

Gene Structure 2034 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G011700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2034 bp

ATGGCAGATCCTCTGATATTGTTCTGTGTTCTTCTTCTGCTCTCAATACCAGTTTCATCTCAGGTCAGTGAGCTCTTCTATCCTGGTTTTAAACATGTGGGCACCAACCTAACCTTGGAAGGAATAGCAGAATTTGAAAACGATCTTGGCATTCTCAAACTGACCAATGACACCAGCAGATTATTGGGTCATGCTTTTTACACTTCCCCAATTCGATTCAAAAACTCCACAAATGGCAAAGCCTTCTCTTTCTCCACCTCATTTGCTTTCACTATAGTTCCTGAGTATCCAAAGCTCGGCGGCCATGGCTTTGCATTCACAATCGCCCCATCGAAGGATCTCAATTCTCTGCCTAGTCAATATCTAGGTCTCTTCAATGGCAGTGATATTGGCAACTCCTCCACACACATCTTTGCAATCGAATTCGACACGGTTCAAGACTTTGAATTTGGAGATATCAATGACAATCATGTAGGGATCGACCTCAACAGCTTGAAATCAAACGCCTCAGCTGAAGCTGCATATTACACAGATGCTACAACCAAACAAAACTTCAACCTCAAGAGTGGGAAAGCAATCCAAGCCTGGATAGACTATGATTCAGCTCAAAATGTAATCAATGTCACAATCTCACCACGCTCTTCCAAACCCAAAACCCCACTTATTTCTTTCCATGTAGATCTCTCCCCGATTTTCGAAGAGTTCATGTATGTTGGGTTCTCAGCTTCAACAGGTCTGCTTGCCAGCTCCCACTACGTTCTGGGCTGGAGCTTCAAGATTGATGGACAGTCCCAACCCCTTCATCTGGCCTCTCTTCCTAAAATTCCAATACCCAGAAAAGATCACACAGCTCTGAAAATCGGAGTCTCAGTCGCAGCCATTGCTCTCACTCTATCTGTAATCTCCATATCCATCTACTTATTCATCAGGAAGCTGAAGAACGCCGAGCCAGTGGAGTCATGGGAGCTCGAGCTTGGCCCACACAGATACTCCTACCAAGAACTGAAAAAAGCCACAAAAGGGTTCAGAGGAAAAGAGCTCCTCGGCGAAGGCGGGTTCGGCCAAGTGTTCAAAGGAACACTCCCCAATTCCAAAACACTAGTAGCCGTCAAGCGAATCTCGAACGATTCGAAACAGGGCCTAAGGGAATTCGTTGCGGAAATCGCAAGCATAGGTAGGCTCCGGCATAGAAATCTAGTCCAATTACTGGGATGGTGTCGCCGAAGAGGCGACCTAATACTTGTCTATGATTACATGCAAAATGGAAGCTTGGATGCTTATTTGTTTGATGAGCCGAAATGGGTGTTGAGTTGGGAACAGAGGTTTGGGATTATAAAGGGGATTGCTTCTGCGCTTCATTATCTACACGAAGGGTTTGAGCAGGTTGTGGTTCACAGAGATGTCAAGGCCAGCAATGTGTTGCTGGATAGTGAAATGAATGGGAGGCTCGGGGATTTTGGGTTGGCGAGGCTGCATGAACACGGGTCGAACTCGAATACGACTCGGGTCGTGGGTACGCTCGGGTATTTGGCTCCGGAGTTGCCCAGAACCGGGAAGGCGAGTACGGGTTCGGATGTGTATGCGTTTGGCGCGCTTTTGCTGGAGGTGGTATGCGGGCGGAGGCCCATTGAGCCCAACGCGAAGCCCGGGGAGTTGGTTTTGGTAGACTGGGTTTGGAATAGGTATAAAGAGGGGAAGGTACTTGAGGTGGTGGATCCCAGGCTTGATGGGGTTTATGATGAGCGGGAGGTGGTTATGGTGGTGAAGTTGGGGTTGATGTGTTCGGCCCATGGGCCGAGGGCCAGGCCCAATATGAGGCTGGTGGTGAGGTATTTGGACGGGGAGGTTGAGATTCCGGAGGAGGTGAGACCGCCGAGTGGGTCCCATGTGGCCGGGTTTGATGAGTTTGTGAGCTCGTTTGCGTCGTCTTCTTCGTTTGATAGGATGAGCTGCTACTCTAATAAAGAGATGGATGCTAGTTTTGCTTCTCTTTCTACTTCTCCTCTCTATCTTCTTCATGGGCAAACTAGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002229 GO:0002239 GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0016020 GO:0042742 GO:0043207 GO:0044464 GO:0050896 GO:0051704 GO:0051707 GO:0071944 GO:0098542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lectin_legB Pkinase Pkinase_Tyr

Protein Analysis

677

Amino Acids

74.87

Weight (kDa)

6.57

Isoelectric Point (pI)

29.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Lectin_legB	PF00139	26 - 272	1.2e-77	Legume lectin domain
Lectin_L-type_dom	PF18483	35 - 249	3.2e-11	Legume lectin beta-barrel domain
Pkinase	PF00069	345 - 544	1.8e-44	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	345 - 611	2.3e-44	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0001385)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55550
fragaria_vesca	FvH4_6g13180 FvH4_7g22900
malus_domestica	MD01G1137300.v1.1 MD01G1137400.v1.1 MD01G1137500.v1.1 MD01G1137600.v1.1 MD01G1137700.v1.1 MD04G1133700.v1.1 MD04G1133800.v1.1 MD12G1147700.v1.1
prunus_persica	Prupe.2G238700_v2.0.a1
pyrus_communis	pycom01g15830 pycom01g15860 pycom01g15870 pycom01g15880 pycom04g12170 pycom12g14140
rosa_chinensis	RchiOBHm_Chr1g0368061 RchiOBHm_Chr3g0465661 RchiOBHm_Chr3g0465671 RchiOBHm_Chr3g0465791 RchiOBHm_Chr4g0404141
rosa_laevigata	RLG00000024618 RLG00000024629 RLG00000024630 RLG00000027242
rosa_multiflora	Rmu_sc0000550.1_g000019 Rmu_sc0005103.1_g000004 Rmu_sc0007705.1_g000006 Rmu_sc0007705.1_g000016 Rmu_sc0007705.1_g000021 Rmu_sc0013273.1_g000002
rosa_roxburghii	Rroxscaffold_4G00288890 Rroxscaffold_6G00414940
rosa_rugosa	Rorug01G0338700 Rorug03G0078100 Rorug03G0078200
rosa_samantha	Rh1AG345700 Rh1BG308000 Rh1CG323600 Rh1DG340100 Rh3BG143600 Rh3CG144600 Rh3CG144700 Rh3CG144800 Rh3CG145700 Rh3DG144900 Rh4AG123100 Rh4BG116200
rosa_wichuraiana	Rw1G030770 Rw3G011660 Rw3G011700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1334
Acc36I	ACCTGC	1 cut(s)	1372
AccB1I	GGYRCC	1 cut(s)	101
AccB7I	CCANNNNNTGG	1 cut(s)	1207
AccBSI	CCGCTC	1 cut(s)	1744
AccI	GTMKAC	1 cut(s)	1665
AccII	CGCG	2 cut(s)	1592, 1640
AccIII	TCCGGA	2 cut(s)	1534, 1855
AciI	CCGC	7 cut(s)	300, 1053, 1157, 1614, 1618, 1744, 1871
AclWI	GGATC	5 cut(s)	2, 345, 485, 1709, 1722
AcoI	YGGCCR	3 cut(s)	301, 1060, 1890
AcsI	RAATTY	5 cut(s)	131, 422, 446, 822, 1148
AcuI	CTGAAG	2 cut(s)	534, 956
AfaI	GTAC	3 cut(s)	1516, 1564, 1701
AflIII	ACRYGT	1 cut(s)	94
AhlI	ACTAGT	1 cut(s)	1099
AjnI	CCWGG	4 cut(s)	82, 584, 1718, 1802
AjuI	GAANNNNNNNTTGG	6 cut(s)	129, 161, 536, 568, 1308, 1340
Alw21I	GWGCWC	4 cut(s)	75, 969, 1041, 1916
Alw26I	GTCTC	3 cut(s)	374, 871, 1861
AlwI	GGATC	5 cut(s)	2, 345, 485, 1709, 1722
Ama87I	CYCGRG	5 cut(s)	968, 1448, 1503, 1520, 1646
Aor13HI	TCCGGA	2 cut(s)	1534, 1855
ApeKI	GCWGC	4 cut(s)	518, 875, 1471, 1950
ApoI	RAATTY	5 cut(s)	131, 422, 446, 822, 1148
ArsI	GACNNNNNNTTYG	2 cut(s)	431, 463
AspLEI	GCGC	3 cut(s)	1354, 1592, 1594
AspS9I	GGNCC	8 cut(s)	977, 1138, 1623, 1786, 1793, 1800, 1806, 1881
AsuC2I	CCSGG	4 cut(s)	1552, 1647, 1648, 1894
AsuHPI	GGTGA	4 cut(s)	624, 1774, 1837, 1876
AsuII	TTCGAA	2 cut(s)	696, 1130
AvaI	CYCGRG	5 cut(s)	968, 1448, 1503, 1520, 1646
AvaII	GGWCC	1 cut(s)	1881
AxyI	CCTNAGG	1 cut(s)	1142
BaeGI	GKGCMC	1 cut(s)	104
BamHI	GGATCC	1 cut(s)	1714
BanI	GGYRCC	1 cut(s)	101
BanII	GRGCYC	5 cut(s)	75, 969, 1041, 1635, 1916
BbsI	GAAGAC	1 cut(s)	1920
Bbv12I	GWGCWC	4 cut(s)	75, 969, 1041, 1916
BbvCI	CCTCAGC	1 cut(s)	508
BbvI	GCAGC	4 cut(s)	505, 887, 1458, 1937
BccI	CCATC	6 cut(s)	337, 776, 920, 1206, 1721, 1963
BceAI	ACGGC	1 cut(s)	1091
BciT130I	CCWGG	4 cut(s)	84, 586, 1720, 1804
BciVI	GTATCC	1 cut(s)	297
BcnI	CCSGG	4 cut(s)	1552, 1647, 1648, 1894
BcoDI	GTCTC	3 cut(s)	374, 871, 1861
BcuI	ACTAGT	1 cut(s)	1099
BfaI	CTAG	6 cut(s)	354, 365, 1100, 1196, 1977, 2028
BfmI	CTRYAG	1 cut(s)	273
BfuAI	ACCTGC	1 cut(s)	1372
BfuI	GTATCC	1 cut(s)	297
BglI	GCCNNNNNGGC	1 cut(s)	1227
BglII	AGATCT	1 cut(s)	679
BisI	GCNGC	5 cut(s)	301, 519, 876, 1472, 1951
BlsI	GCNGC	5 cut(s)	302, 520, 877, 1473, 1952
Bme1390I	CCNGG	8 cut(s)	84, 586, 1552, 1647, 1648, 1720, 1804, 1894
Bme18I	GGWCC	1 cut(s)	1881
BmeT110I	CYCGRG	5 cut(s)	968, 1448, 1503, 1520, 1646
BmgT120I	GGNCC	8 cut(s)	977, 1138, 1623, 1786, 1793, 1800, 1806, 1881
BmiI	GGNNCC	6 cut(s)	103, 1181, 1533, 1716, 1882, 1883
BmrFI	CCNGG	8 cut(s)	84, 586, 1552, 1647, 1648, 1720, 1804, 1894
BmrI	ACTGGG	2 cut(s)	1217, 1678
BmsI	GCATC	3 cut(s)	523, 1264, 1963
BmuI	ACTGGG	2 cut(s)	1217, 1678
BoxI	GACNNNNGTC	1 cut(s)	1505
BpiI	GAAGAC	1 cut(s)	1920
BpmI	CTGGAG	2 cut(s)	787, 1622
Bpu10I	CCTNAGC	1 cut(s)	508
Bpu14I	TTCGAA	2 cut(s)	696, 1130
BpuEI	CTTGAG	2 cut(s)	545, 1724
BpuMI	CCSGG	4 cut(s)	1552, 1647, 1648, 1894
BsaI	GGTCTC	2 cut(s)	374, 1861
BsaJI	CCNNGG	8 cut(s)	114, 304, 1042, 1646, 1647, 1718, 1789, 1796
BsaWI	WCCGGW	2 cut(s)	1534, 1855
BsaXI	ACNNNNNCTCC	4 cut(s)	855, 885, 974, 1004
Bse1I	ACTGG	4 cut(s)	50, 950, 1212, 1673
Bse21I	CCTNAGG	1 cut(s)	1142
Bse3DI	GCAATG	2 cut(s)	879, 1420
BseAI	TCCGGA	2 cut(s)	1534, 1855
BseBI	CCWGG	4 cut(s)	84, 586, 1720, 1804
BseDI	CCNNGG	8 cut(s)	114, 304, 1042, 1646, 1647, 1718, 1789, 1796
BseGI	GGATG	5 cut(s)	1217, 1279, 1579, 1950, 1978
BseMI	GCAATG	2 cut(s)	879, 1420
BseMII	CTCAG	5 cut(s)	74, 273, 522, 735, 882
BseNI	ACTGG	4 cut(s)	50, 950, 1212, 1673
BsePI	GCGCGC	1 cut(s)	1590
BseRI	GAGGAG	4 cut(s)	388, 1031, 1874, 1992
BseSI	GKGCMC	1 cut(s)	104
BseXI	GCAGC	4 cut(s)	505, 887, 1458, 1937
Bsh1236I	CGCG	2 cut(s)	1592, 1640
BshNI	GGYRCC	1 cut(s)	101
BsiHKAI	GWGCWC	4 cut(s)	75, 969, 1041, 1916
BsiHKCI	CYCGRG	5 cut(s)	968, 1448, 1503, 1520, 1646
BsiSI	CCGG	6 cut(s)	1183, 1535, 1551, 1647, 1856, 1893
BslFI	GGGAC	2 cut(s)	775, 1867
BsmAI	GTCTC	3 cut(s)	374, 871, 1861
BsmFI	GGGAC	2 cut(s)	775, 1867
BsmI	GAATGC	2 cut(s)	150, 314
Bso31I	GGTCTC	2 cut(s)	374, 1861
BsoBI	CYCGRG	5 cut(s)	968, 1448, 1503, 1520, 1646
Bsp119I	TTCGAA	2 cut(s)	696, 1130
Bsp1286I	GDGCHC	6 cut(s)	75, 104, 969, 1041, 1635, 1916
Bsp13I	TCCGGA	2 cut(s)	1534, 1855
Bsp143I	GATC	7 cut(s)	7, 142, 337, 477, 679, 841, 1714
Bsp19I	CCATGG	2 cut(s)	304, 1789
BspACI	CCGC	7 cut(s)	300, 1053, 1157, 1614, 1618, 1744, 1871
BspCNI	CTCAG	5 cut(s)	73, 274, 521, 734, 881
BspEI	TCCGGA	2 cut(s)	1534, 1855
BspFNI	CGCG	2 cut(s)	1592, 1640
BspLI	GGNNCC	6 cut(s)	103, 1181, 1533, 1716, 1882, 1883
BspMI	ACCTGC	1 cut(s)	1372
BspPI	GGATC	5 cut(s)	2, 345, 485, 1709, 1722
BspQI	GCTCTTC	2 cut(s)	80, 646
BspT104I	TTCGAA	2 cut(s)	696, 1130
BspT107I	GGYRCC	1 cut(s)	101
BspTNI	GGTCTC	2 cut(s)	374, 1861
BsrBI	CCGCTC	1 cut(s)	1744
BsrDI	GCAATG	2 cut(s)	879, 1420
BsrI	ACTGG	4 cut(s)	50, 950, 1212, 1673
BssECI	CCNNGG	8 cut(s)	114, 304, 1042, 1646, 1647, 1718, 1789, 1796
BssHII	GCGCGC	1 cut(s)	1590
BssMI	GATC	7 cut(s)	7, 142, 337, 477, 679, 841, 1714
BssT1I	CCWWGG	3 cut(s)	114, 304, 1789
Bst2UI	CCWGG	4 cut(s)	84, 586, 1720, 1804
Bst4CI	ACNGT	2 cut(s)	433, 789
Bst6I	CTCTTC	6 cut(s)	80, 377, 646, 693, 819, 1219
BstAPI	GCANNNNNTGC	1 cut(s)	881
BstBI	TTCGAA	2 cut(s)	696, 1130
BstC8I	GCNNGC	6 cut(s)	741, 745, 1168, 1411, 1592, 1616
BstDEI	CTNAG	6 cut(s)	60, 282, 508, 721, 868, 1142
BstDSI	CCRYGG	2 cut(s)	304, 1789
BstF5I	GGATG	5 cut(s)	1217, 1279, 1579, 1950, 1978
BstFNI	CGCG	2 cut(s)	1592, 1640
BstHHI	GCGC	3 cut(s)	1354, 1592, 1594
BstKTI	GATC	7 cut(s)	10, 145, 340, 480, 682, 844, 1717
BstMAI	GTCTC	3 cut(s)	374, 871, 1861
BstMBI	GATC	7 cut(s)	7, 142, 337, 477, 679, 841, 1714
BstNI	CCWGG	4 cut(s)	84, 586, 1720, 1804
BstNSI	RCATGY	2 cut(s)	98, 1258
BstPAI	GACNNNNGTC	1 cut(s)	1505
BstSCI	CCNGG	8 cut(s)	82, 584, 1550, 1645, 1646, 1718, 1802, 1892
BstSFI	CTRYAG	1 cut(s)	273
BstSLI	GKGCMC	1 cut(s)	104
BstUI	CGCG	2 cut(s)	1592, 1640
BstV1I	GCAGC	4 cut(s)	505, 887, 1458, 1937
BstV2I	GAAGAC	1 cut(s)	1920
BstX2I	RGATCY	4 cut(s)	7, 337, 679, 1714
BstYI	RGATCY	4 cut(s)	7, 337, 679, 1714
Bsu36I	CCTNAGG	1 cut(s)	1142
BsuI	GTATCC	1 cut(s)	297
BtgI	CCRYGG	2 cut(s)	304, 1789
BtsCI	GGATG	5 cut(s)	1217, 1279, 1579, 1950, 1978
BtsI	GCAGTG	1 cut(s)	388
BtsIMutI	CAGTG	3 cut(s)	73, 388, 957
BveI	ACCTGC	1 cut(s)	1372
Cac8I	GCNNGC	6 cut(s)	741, 745, 1168, 1411, 1592, 1616
CfoI	GCGC	3 cut(s)	1354, 1592, 1594
Cfr13I	GGNCC	8 cut(s)	977, 1138, 1623, 1786, 1793, 1800, 1806, 1881
Cfr9I	CCCGGG	1 cut(s)	1646
CseI	GACGC	1 cut(s)	1911
Csp6I	GTAC	3 cut(s)	1515, 1563, 1700
CspCI	CAANNNNNGTGG	2 cut(s)	244, 279
CviQI	GTAC	3 cut(s)	1515, 1563, 1700
DdeI	CTNAG	6 cut(s)	60, 282, 508, 721, 868, 1142
DpnI	GATC	7 cut(s)	9, 144, 339, 479, 681, 843, 1716
DpnII	GATC	7 cut(s)	7, 142, 337, 477, 679, 841, 1714
DraI	TTTAAA	1 cut(s)	91
EaeI	YGGCCR	3 cut(s)	301, 1060, 1890
Eam1104I	CTCTTC	6 cut(s)	80, 377, 646, 693, 819, 1219
EarI	CTCTTC	6 cut(s)	80, 377, 646, 693, 819, 1219
EciI	GGCGGA	1 cut(s)	1633
Ecl136II	GAGCTC	4 cut(s)	73, 967, 1039, 1914
Eco130I	CCWWGG	3 cut(s)	114, 304, 1789
Eco24I	GRGCYC	5 cut(s)	75, 969, 1041, 1635, 1916
Eco31I	GGTCTC	2 cut(s)	374, 1861
Eco32I	GATATC	1 cut(s)	457
Eco47I	GGWCC	1 cut(s)	1881
Eco53kI	GAGCTC	4 cut(s)	73, 967, 1039, 1914
Eco57I	CTGAAG	2 cut(s)	534, 956
Eco81I	CCTNAGG	1 cut(s)	1142
Eco88I	CYCGRG	5 cut(s)	968, 1448, 1503, 1520, 1646
EcoICRI	GAGCTC	4 cut(s)	73, 967, 1039, 1914
EcoO109I	RGGNCCY	2 cut(s)	1138, 1881
EcoRI	GAATTC	2 cut(s)	422, 1148
EcoRII	CCWGG	4 cut(s)	82, 584, 1718, 1802
EcoRV	GATATC	1 cut(s)	457
EcoT14I	CCWWGG	3 cut(s)	114, 304, 1789
EcoT38I	GRGCYC	5 cut(s)	75, 969, 1041, 1635, 1916
ErhI	CCWWGG	3 cut(s)	114, 304, 1789
FaqI	GGGAC	2 cut(s)	775, 1867
FauI	CCCGC	3 cut(s)	1046, 1607, 1737
FblI	GTMKAC	1 cut(s)	1665
Fnu4HI	GCNGC	5 cut(s)	301, 519, 876, 1472, 1951
FokI	GGATG	5 cut(s)	1224, 1286, 1586, 1957, 1985
FriOI	GRGCYC	5 cut(s)	75, 969, 1041, 1635, 1916
Fsp4HI	GCNGC	5 cut(s)	301, 519, 876, 1472, 1951
FspBI	CTAG	6 cut(s)	354, 365, 1100, 1196, 1977, 2028
GlaI	GCGC	3 cut(s)	1353, 1591, 1593
GluI	GCNGC	5 cut(s)	301, 519, 876, 1472, 1951
GsuI	CTGGAG	2 cut(s)	787, 1622
HapII	CCGG	6 cut(s)	1183, 1535, 1551, 1647, 1856, 1893
HgaI	GACGC	1 cut(s)	1911
HhaI	GCGC	3 cut(s)	1354, 1592, 1594
Hin6I	GCGC	3 cut(s)	1352, 1590, 1592
HinP1I	GCGC	3 cut(s)	1352, 1590, 1592
HindIII	AAGCTT	1 cut(s)	1267
HinfI	GANTC	8 cut(s)	216, 599, 864, 956, 1116, 1127, 1501, 1852
HpaII	CCGG	6 cut(s)	1183, 1535, 1551, 1647, 1856, 1893
HphI	GGTGA	4 cut(s)	624, 1774, 1837, 1876
Hpy166II	GTNNAC	2 cut(s)	1393, 1666
Hpy188I	TCNGA	5 cut(s)	15, 855, 863, 1028, 1573
Hpy188III	TCNNGA	8 cut(s)	281, 437, 562, 775, 928, 1120, 1535, 1856
Hpy8I	GTNNAC	2 cut(s)	1393, 1666
Hpy99I	CGWCG	1 cut(s)	1927
HpyAV	CCTTC	8 cut(s)	113, 253, 328, 809, 1043, 1364, 1549, 1690
HpyCH4III	ACNGT	2 cut(s)	433, 789
HpyCH4IV	ACGT	1 cut(s)	756
HpyCH4V	TGCA	5 cut(s)	314, 416, 521, 1258, 1474
HpyF3I	CTNAG	6 cut(s)	60, 282, 508, 721, 868, 1142
HpySE526I	ACGT	1 cut(s)	756
HspAI	GCGC	3 cut(s)	1352, 1590, 1592
KflI	GGGWCCC	1 cut(s)	1881
Kpn2I	TCCGGA	2 cut(s)	1534, 1855
Kzo9I	GATC	7 cut(s)	7, 142, 337, 477, 679, 841, 1714
LguI	GCTCTTC	2 cut(s)	80, 646
LmnI	GCTCC	6 cut(s)	752, 768, 964, 1044, 1185, 1537
Lsp1109I	GCAGC	4 cut(s)	505, 887, 1458, 1937
LweI	GCATC	3 cut(s)	523, 1264, 1963
MaeI	CTAG	6 cut(s)	354, 365, 1100, 1196, 1977, 2028
MaeII	ACGT	1 cut(s)	756
MaeIII	GTNAC	1 cut(s)	622
MalI	GATC	7 cut(s)	9, 144, 339, 479, 681, 843, 1716
MbiI	CCGCTC	1 cut(s)	1744
MboI	GATC	7 cut(s)	7, 142, 337, 477, 679, 841, 1714
MflI	RGATCY	4 cut(s)	7, 337, 679, 1714
MhlI	GDGCHC	6 cut(s)	75, 104, 969, 1041, 1635, 1916
MluCI	AATT	9 cut(s)	131, 210, 343, 422, 446, 822, 1087, 1148, 1202
MlyI	GAGTC	3 cut(s)	873, 965, 1495
MroI	TCCGGA	2 cut(s)	1534, 1855
MseI	TTAA	1 cut(s)	90
MslI	CAYNNNNRTG	1 cut(s)	1398
MspA1I	CMGCKG	1 cut(s)	512
MspI	CCGG	6 cut(s)	1183, 1535, 1551, 1647, 1856, 1893
MspR9I	CCNGG	8 cut(s)	84, 586, 1552, 1647, 1648, 1720, 1804, 1894
Mva1269I	GAATGC	2 cut(s)	150, 314
MvaI	CCWGG	4 cut(s)	84, 586, 1720, 1804
MvnI	CGCG	2 cut(s)	1592, 1640
NciI	CCSGG	4 cut(s)	1552, 1647, 1648, 1894
NcoI	CCATGG	2 cut(s)	304, 1789
NdeII	GATC	7 cut(s)	7, 142, 337, 477, 679, 841, 1714
NlaIV	GGNNCC	6 cut(s)	103, 1181, 1533, 1716, 1882, 1883
NmeAIII	GCCGAG	5 cut(s)	276, 970, 1023, 1821, 1899
NmuCI	GTSAC	1 cut(s)	622
NspI	RCATGY	2 cut(s)	98, 1258
NspV	TTCGAA	2 cut(s)	696, 1130
PaeR7I	CTCGAG	1 cut(s)	968
PauI	GCGCGC	1 cut(s)	1590
PciI	ACATGT	1 cut(s)	94
PciSI	GCTCTTC	2 cut(s)	80, 646
PcsI	WCGNNNNNNNCGW	3 cut(s)	1127, 1922, 1931
PctI	GAATGC	2 cut(s)	150, 314
PfeI	GAWTC	5 cut(s)	216, 599, 1116, 1127, 1852
PflMI	CCANNNNNTGG	1 cut(s)	1207
PkrI	GCNGC	5 cut(s)	302, 520, 877, 1473, 1952
PleI	GAGTC	3 cut(s)	872, 964, 1495
PpsI	GAGTC	3 cut(s)	872, 964, 1495
PpuMI	RGGWCCY	1 cut(s)	1881
PscI	ACATGT	1 cut(s)	94
PshAI	GACNNNNGTC	1 cut(s)	1505
PsiI	TTATAA	1 cut(s)	1334
Psp124BI	GAGCTC	4 cut(s)	75, 969, 1041, 1916
Psp5II	RGGWCCY	1 cut(s)	1881
Psp6I	CCWGG	4 cut(s)	82, 584, 1718, 1802
PspGI	CCWGG	4 cut(s)	82, 584, 1718, 1802
PspN4I	GGNNCC	6 cut(s)	103, 1181, 1533, 1716, 1882, 1883
PspPI	GGNCC	8 cut(s)	977, 1138, 1623, 1786, 1793, 1800, 1806, 1881
PspPPI	RGGWCCY	1 cut(s)	1881
PspXI	VCTCGAGB	1 cut(s)	968
PsrI	GAACNNNNNNTAC	2 cut(s)	701, 733
PsuI	RGATCY	4 cut(s)	7, 337, 679, 1714
PteI	GCGCGC	1 cut(s)	1590
PvuII	CAGCTG	1 cut(s)	512
RsaI	GTAC	3 cut(s)	1516, 1564, 1701
RsaNI	GTAC	3 cut(s)	1515, 1563, 1700
RseI	CAYNNNNRTG	1 cut(s)	1398
SacI	GAGCTC	4 cut(s)	75, 969, 1041, 1916
SapI	GCTCTTC	2 cut(s)	80, 646
SaqAI	TTAA	1 cut(s)	90
SatI	GCNGC	5 cut(s)	301, 519, 876, 1472, 1951
Sau3AI	GATC	7 cut(s)	7, 142, 337, 477, 679, 841, 1714
Sau96I	GGNCC	8 cut(s)	977, 1138, 1623, 1786, 1793, 1800, 1806, 1881
SchI	GAGTC	3 cut(s)	873, 965, 1495
ScrFI	CCNGG	8 cut(s)	84, 586, 1552, 1647, 1648, 1720, 1804, 1894
SduI	GDGCHC	6 cut(s)	75, 104, 969, 1041, 1635, 1916
SfaNI	GCATC	3 cut(s)	523, 1264, 1963
SfcI	CTRYAG	1 cut(s)	273
Sfr274I	CTCGAG	1 cut(s)	968
SfuI	TTCGAA	2 cut(s)	696, 1130
SinI	GGWCC	1 cut(s)	1881
SlaI	CTCGAG	1 cut(s)	968
SmaI	CCCGGG	1 cut(s)	1648
SmiMI	CAYNNNNRTG	1 cut(s)	1398
SmlI	CTYRAG	3 cut(s)	560, 968, 1703
SmoI	CTYRAG	3 cut(s)	560, 968, 1703
SpeI	ACTAGT	1 cut(s)	1099
Sse9I	AATT	9 cut(s)	131, 210, 343, 422, 446, 822, 1087, 1148, 1202
SsiI	CCGC	7 cut(s)	300, 1053, 1157, 1614, 1618, 1744, 1871
SspMI	CTAG	6 cut(s)	354, 365, 1100, 1196, 1977, 2028
SstI	GAGCTC	4 cut(s)	75, 969, 1041, 1916
StyD4I	CCNGG	8 cut(s)	82, 584, 1550, 1645, 1646, 1718, 1802, 1892
StyI	CCWWGG	3 cut(s)	114, 304, 1789
TaaI	ACNGT	2 cut(s)	433, 789
TaiI	ACGT	1 cut(s)	759
TasI	AATT	9 cut(s)	131, 210, 343, 422, 446, 822, 1087, 1148, 1202
TauI	GCSGC	1 cut(s)	303
TfiI	GAWTC	5 cut(s)	216, 599, 1116, 1127, 1852
Tru1I	TTAA	1 cut(s)	90
Tru9I	TTAA	1 cut(s)	90
TscAI	CASTG	3 cut(s)	73, 388, 957
TseFI	GTSAC	1 cut(s)	622
TseI	GCWGC	4 cut(s)	518, 875, 1471, 1950
Tsp45I	GTSAC	1 cut(s)	622
TspDTI	ATGAA	8 cut(s)	45, 694, 791, 913, 1346, 1451, 1491, 2006
TspMI	CCCGGG	1 cut(s)	1646
TspRI	CASTG	3 cut(s)	73, 388, 957
Van91I	CCANNNNNTGG	1 cut(s)	1207
VpaK11BI	GGWCC	1 cut(s)	1881
XapI	RAATTY	5 cut(s)	131, 422, 446, 822, 1148
XceI	RCATGY	2 cut(s)	98, 1258
XcmI	CCANNNNNNNNNTGG	4 cut(s)	112, 181, 957, 1816
XhoI	CTCGAG	1 cut(s)	968
XmaI	CCCGGG	1 cut(s)	1646
XmiI	GTMKAC	1 cut(s)	1665
XspI	CTAG	6 cut(s)	354, 365, 1100, 1196, 1977, 2028

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.