Rmu_sc0007705.1_g000021

L-type lectin-domain containing receptor kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007705.1
Physical Location & Seq
Reverse (-)
96298 .. 96687
390 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007705.1_g000021.1.cds

Sequence Viewer

Length: 390 bp
atgcctagtcaatatctaggtctcttcaatggcagtgatattggcaactcctccacacacatctgtgcaatcgaattcgacacagttcaagacttggaatttggagatatcaatgacaatcatgtagggatcgacctcaacagcttgaaatcaaacgcctcagctgaagctgcatattacacagatgctacaaccaaacaaaacttcaacctcaagagtgggaaagcaatccaagcctggatagactatgattcagctcaaaatgtgatcaatgtcacaatttcaccactctcttccaaacccaaaaccccacttatttctttccatgtagatctctccccgattttcgaagagtttatgtatgttgggttctcagctatgatgcactga

Protein Analysis

129

Amino Acids

14.19

Weight (kDa)

4.49

Isoelectric Point (pI)

38.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 137
AcsI RAATTY 2 cut(s) 74, 98
AcuI CTGAAG 1 cut(s) 186
AgsI TTSAA 4 cut(s) 28, 89, 148, 208
AjnI CCWGG 1 cut(s) 236
AjuI GAANNNNNNNTTGG 2 cut(s) 188, 220
AleI CACNNNNGTG 1 cut(s) 63
AluBI AGCT 5 cut(s) 144, 164, 170, 257, 377
AluI AGCT 5 cut(s) 144, 164, 170, 257, 377
Alw26I GTCTC 1 cut(s) 26
AlwI GGATC 1 cut(s) 137
ApeKI GCWGC 1 cut(s) 170
ApoI RAATTY 2 cut(s) 74, 98
ArsI GACNNNNNNTTYG 2 cut(s) 83, 115
AsuHPI GGTGA 1 cut(s) 276
AsuII TTCGAA 1 cut(s) 348
BbvCI CCTCAGC 1 cut(s) 160
BbvI GCAGC 1 cut(s) 157
BciT130I CCWGG 1 cut(s) 238
BclI TGATCA 1 cut(s) 267
BcoDI GTCTC 1 cut(s) 26
BfaI CTAG 2 cut(s) 6, 17
BglII AGATCT 1 cut(s) 331
BisI GCNGC 1 cut(s) 171
BlsI GCNGC 1 cut(s) 172
Bme1390I CCNGG 1 cut(s) 238
BmrFI CCNGG 1 cut(s) 238
BmsI GCATC 2 cut(s) 175, 372
Bpu10I CCTNAGC 1 cut(s) 160
Bpu14I TTCGAA 1 cut(s) 348
BpuEI CTTGAG 1 cut(s) 197
BsaI GGTCTC 1 cut(s) 26
BseBI CCWGG 1 cut(s) 238
BseMII CTCAG 2 cut(s) 174, 387
BseRI GAGGAG 1 cut(s) 40
BseXI GCAGC 1 cut(s) 157
BsmAI GTCTC 1 cut(s) 26
Bso31I GGTCTC 1 cut(s) 26
Bsp119I TTCGAA 1 cut(s) 348
Bsp143I GATC 3 cut(s) 129, 267, 331
BspCNI CTCAG 2 cut(s) 173, 386
BspPI GGATC 1 cut(s) 137
BspT104I TTCGAA 1 cut(s) 348
BspTNI GGTCTC 1 cut(s) 26
BssMI GATC 3 cut(s) 129, 267, 331
Bst2UI CCWGG 1 cut(s) 238
Bst4CI ACNGT 1 cut(s) 85
Bst6I CTCTTC 3 cut(s) 29, 298, 345
BstBI TTCGAA 1 cut(s) 348
BstDEI CTNAG 2 cut(s) 160, 373
BstKTI GATC 3 cut(s) 132, 270, 334
BstMAI GTCTC 1 cut(s) 26
BstMBI GATC 3 cut(s) 129, 267, 331
BstMWI GCNNNNNNNGC 2 cut(s) 170, 233
BstNI CCWGG 1 cut(s) 238
BstSCI CCNGG 1 cut(s) 236
BstV1I GCAGC 1 cut(s) 157
BstX2I RGATCY 1 cut(s) 331
BstYI RGATCY 1 cut(s) 331
BtsI GCAGTG 1 cut(s) 40
BtsIMutI CAGTG 2 cut(s) 40, 385
CviAII CATG 2 cut(s) 122, 326
CviJI RGCY 6 cut(s) 144, 164, 170, 236, 257, 377
CviKI_1 RGCY 6 cut(s) 144, 164, 170, 236, 257, 377
DdeI CTNAG 2 cut(s) 160, 373
DpnI GATC 3 cut(s) 131, 269, 333
DpnII GATC 3 cut(s) 129, 267, 331
Eam1104I CTCTTC 3 cut(s) 29, 298, 345
EarI CTCTTC 3 cut(s) 29, 298, 345
Eco31I GGTCTC 1 cut(s) 26
Eco32I GATATC 1 cut(s) 109
Eco57I CTGAAG 1 cut(s) 186
EcoRI GAATTC 1 cut(s) 74
EcoRII CCWGG 1 cut(s) 236
EcoRV GATATC 1 cut(s) 109
FaeI CATG 2 cut(s) 125, 329
FaiI YATR 7 cut(s) 123, 175, 249, 327, 359, 363, 380
FatI CATG 2 cut(s) 121, 325
FbaI TGATCA 1 cut(s) 267
Fnu4HI GCNGC 1 cut(s) 171
Fsp4HI GCNGC 1 cut(s) 171
FspBI CTAG 2 cut(s) 6, 17
GluI GCNGC 1 cut(s) 171
Hin1II CATG 2 cut(s) 125, 329
HinfI GANTC 1 cut(s) 251
HphI GGTGA 1 cut(s) 276
Hpy188III TCNNGA 2 cut(s) 89, 214
HpyCH4III ACNGT 1 cut(s) 85
HpyCH4V TGCA 3 cut(s) 68, 173, 385
HpyF10VI GCNNNNNNNGC 2 cut(s) 170, 233
HpyF3I CTNAG 2 cut(s) 160, 373
Hsp92II CATG 2 cut(s) 125, 329
Ksp22I TGATCA 1 cut(s) 267
Kzo9I GATC 3 cut(s) 129, 267, 331
LpnPI CCDG 2 cut(s) 223, 250
Lsp1109I GCAGC 1 cut(s) 157
LweI GCATC 2 cut(s) 175, 372
MaeI CTAG 2 cut(s) 6, 17
MaeIII GTNAC 1 cut(s) 274
MalI GATC 3 cut(s) 131, 269, 333
MboI GATC 3 cut(s) 129, 267, 331
MboII GAAGA 3 cut(s) 16, 285, 362
MflI RGATCY 1 cut(s) 331
MluCI AATT 3 cut(s) 74, 98, 279
MnlI CCTC 4 cut(s) 61, 146, 169, 221
MslI CAYNNNNRTG 1 cut(s) 63
MspA1I CMGCKG 1 cut(s) 164
MspR9I CCNGG 1 cut(s) 238
MvaI CCWGG 1 cut(s) 238
MwoI GCNNNNNNNGC 2 cut(s) 170, 233
NdeII GATC 3 cut(s) 129, 267, 331
NlaIII CATG 2 cut(s) 125, 329
NmuCI GTSAC 1 cut(s) 274
NspV TTCGAA 1 cut(s) 348
OliI CACNNNNGTG 1 cut(s) 63
PfeI GAWTC 1 cut(s) 251
PkrI GCNGC 1 cut(s) 172
Psp6I CCWGG 1 cut(s) 236
PspGI CCWGG 1 cut(s) 236
PsrI GAACNNNNNNTAC 2 cut(s) 353, 385
PsuI RGATCY 1 cut(s) 331
PvuII CAGCTG 1 cut(s) 164
RseI CAYNNNNRTG 1 cut(s) 63
SatI GCNGC 1 cut(s) 171
Sau3AI GATC 3 cut(s) 129, 267, 331
ScrFI CCNGG 1 cut(s) 238
SetI ASST 8 cut(s) 22, 138, 146, 166, 172, 213, 259, 379
SfaNI GCATC 2 cut(s) 175, 372
SfuI TTCGAA 1 cut(s) 348
SmiMI CAYNNNNRTG 1 cut(s) 63
SmlI CTYRAG 1 cut(s) 212
SmoI CTYRAG 1 cut(s) 212
Sse9I AATT 3 cut(s) 74, 98, 279
SspMI CTAG 2 cut(s) 6, 17
StyD4I CCNGG 1 cut(s) 236
TaaI ACNGT 1 cut(s) 85
TaqI TCGA 4 cut(s) 72, 78, 132, 348
TasI AATT 3 cut(s) 74, 98, 279
TfiI GAWTC 1 cut(s) 251
TscAI CASTG 1 cut(s) 40
TseFI GTSAC 1 cut(s) 274
TseI GCWGC 1 cut(s) 170
Tsp45I GTSAC 1 cut(s) 274
TspRI CASTG 1 cut(s) 40
XapI RAATTY 2 cut(s) 74, 98
XspI CTAG 2 cut(s) 6, 17
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.