Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0001385

Physical Location & Seq

Genomic Coordinates Forward (+)

6126616 .. 6131095

Gene Structure 4480 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0078200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1605 bp

ATGTCTCTGCGGCCGAGCACACGAACCGAGGTGCGGAAGAAATCGTACAAGTCGGGGGTGGACGCCGACGACGCGCGGCGGAGGAGGGAGGACAACTTGGTCGAGATCAGGAAGAACAAGCGCGAGGACAGTTTGCTCAAGAAGAGGAGAGAGGGCTTGGCTCTATCGCAGCAGCAATTGCTCGATGGCTCTCCCAATCCTGTCCTCGTCGAGAAAAGGTTGGAAAGTATACCTGCAATGGTGCAAGGAGTATGGTCTAATGATCCTGCTTTGCAATTGGAAGCAACTACTCAGTTTAGAAAGCTATTGTCAATTGAACGCAGCCCTCCAATTGATGAGGTCATAAAAGCCGGTGCAGTCCCTCGATTTGTGGAGTTCCTTGCAAGGCAGGATATGCCTCAACTACAATTTGAAGCTGCATGGGCTTTGACCAATGTTGCATCTGGAACATCTGAGCATACTCGAGTTGTTATTGAACATGGTGCAGTTCCCCTGTTTGTGCAGCTTCTAAGCTCTGGCAGTGATGATGTCAGAGAGCAGGCAGTATGGGCTCTAGGTAATGTAGCTGGTGACTCACCAAGTTGCAGGGATCTTGTTCTCTCACAGGGTGCACTAATGCCATTGCTAGCCCAGTTAAATGAAAAATCAAAGTTATCCATGCTGAGGAATGCTACATGGACTTTATCTAACTTCTGTCGTGGCAAGCCGCCCACACCGTTTGATCAGGTGAAGGCCGCTTTACCAGTTCTTCAACAACTCATTTACTTGAATGATGAAGAGGTCTTGACTGATGCTTGCTGGGCCCTATCATATCTCTCAGATGGCCCAAATGACAAAATTCAGGCTGTGATTGAAGCAGGCGTCTGTCAACGACTTGTGGAGCTTCTGCTCCATCCATCAGCTACGGTTCTTATACCTGCCCTTCGGACAGTGGGAAATATTGTTACAGGCGATGACTCCCAGACTCAGTTTGTTATTGAAAATGGAGTACTGCCTTGCCTGCATCAACTTCTCAATCAAACTCACAAAAAAAGCATCAAGAAAGAAGCTTGTTGGACAATTTCAAATATTACAGCTGGGAACAAAGCTCAAATACAGGCTGTGATTGATGCCCAAATCATTCTCCCACTCGTACAACTTCTCCAACATGCAGAATTCGACATAAAAAAGGAAGCTGCATGGGCCATCTCAAATGCAACTTCTGGAGGATCTCATGAACAGATTCAATTCCTGGTGACTCAAGGTTGTATTAAACCGCTCTGTGATCTGCTAATCTGCCCAGATCCAAGGATAGTAACAGTGTGCCTTGAAGGTCTTGAGAACATTCTGAAGGTGGGGGAGGCTGACAAAGAAATGGGAGCCAATAATGGGGTCAATCTTTATGCTCAAATGATTGATGAATTTGATGGATTGGAGAAGATTGAGAATCTGCAGACGCACGATAACAATGAGATTTATGAGAAGGCTGTGAAGATCTTGGAGAGATATTGGGCTGAGGAAGAAGATGAACAGAACCTCCAGCAGAATGGGGATGCAAATCAACATGGTTTTACTTTTGGGGGAAACCAGCCCACCGCTCCCCCTGGTGGGTTCAAATTTGGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002229 GO:0002239 GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0016020 GO:0042742 GO:0043207 GO:0044464 GO:0050896 GO:0051704 GO:0051707 GO:0071944 GO:0098542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lectin_legB Pkinase Pkinase_Tyr

Protein Analysis

534

Amino Acids

59.04

Weight (kDa)

5.23

Isoelectric Point (pI)

46.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
IBB	PF01749	12 - 97	1.2e-23	Importin beta binding domain
Arm	PF00514	108 - 148	6.4e-09	Armadillo/beta-catenin-like repeat
HEAT_EZ	PF13513	133 - 188	3.2e-10	HEAT-like repeat
Arm	PF00514	151 - 189	2e-12	Armadillo/beta-catenin-like repeat
Arm	PF00514	192 - 233	4.6e-06	Armadillo/beta-catenin-like repeat
Arm	PF00514	277 - 315	2.6e-08	Armadillo/beta-catenin-like repeat
ARM_ARMC5	PF24768	282 - 468	1.6e-09	ARMC5
Arm	PF00514	319 - 359	3.1e-09	Armadillo/beta-catenin-like repeat
Arm	PF00514	361 - 400	2.2e-11	Armadillo/beta-catenin-like repeat
Arm	PF00514	404 - 443	4.1e-07	Armadillo/beta-catenin-like repeat
Arm_3	PF16186	459 - 506	3.3e-21	Atypical Arm repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001385)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55550
fragaria_vesca	FvH4_6g13180 FvH4_7g22900
malus_domestica	MD01G1137300.v1.1 MD01G1137400.v1.1 MD01G1137500.v1.1 MD01G1137600.v1.1 MD01G1137700.v1.1 MD04G1133700.v1.1 MD04G1133800.v1.1 MD12G1147700.v1.1
prunus_persica	Prupe.2G238700_v2.0.a1
pyrus_communis	pycom01g15830 pycom01g15860 pycom01g15870 pycom01g15880 pycom04g12170 pycom12g14140
rosa_chinensis	RchiOBHm_Chr1g0368061 RchiOBHm_Chr3g0465661 RchiOBHm_Chr3g0465671 RchiOBHm_Chr3g0465791 RchiOBHm_Chr4g0404141
rosa_laevigata	RLG00000024618 RLG00000024629 RLG00000024630 RLG00000027242
rosa_multiflora	Rmu_sc0000550.1_g000019 Rmu_sc0005103.1_g000004 Rmu_sc0007705.1_g000006 Rmu_sc0007705.1_g000016 Rmu_sc0007705.1_g000021 Rmu_sc0013273.1_g000002
rosa_roxburghii	Rroxscaffold_4G00288890 Rroxscaffold_6G00414940
rosa_rugosa	Rorug01G0338700 Rorug03G0078100 Rorug03G0078200
rosa_samantha	Rh1AG345700 Rh1BG308000 Rh1CG323600 Rh1DG340100 Rh3BG143600 Rh3CG144600 Rh3CG144700 Rh3CG144800 Rh3CG145700 Rh3DG144900 Rh4AG123100 Rh4BG116200
rosa_wichuraiana	Rw1G030770 Rw3G011660 Rw3G011700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	98
Acc36I	ACCTGC	2 cut(s)	241, 925
AccBSI	CCGCTC	2 cut(s)	1258, 1577
AccI	GTMKAC	1 cut(s)	229
AccII	CGCG	3 cut(s)	74, 76, 123
AciI	CCGC	8 cut(s)	10, 34, 76, 79, 707, 735, 1256, 1575
AclWI	GGATC	4 cut(s)	257, 597, 1216, 1277
AcoI	YGGCCR	1 cut(s)	11
AcsI	RAATTY	4 cut(s)	837, 1154, 1400, 1595
AcuI	CTGAAG	1 cut(s)	1349
AcyI	GRCGYC	2 cut(s)	63, 861
AdeI	CACNNNGTG	1 cut(s)	608
AfaI	GTAC	3 cut(s)	47, 990, 1134
AfiI	CCNNNNNNNGG	5 cut(s)	33, 663, 1368, 1586, 1587
AjnI	CCWGG	2 cut(s)	1230, 1582
AloI	GAACNNNNNNTCC	2 cut(s)	1500, 1532
Alw21I	GWGCWC	2 cut(s)	20, 613
Alw26I	GTCTC	1 cut(s)	9
Alw44I	GTGCAC	1 cut(s)	609
AlwI	GGATC	4 cut(s)	257, 597, 1216, 1277
Ama87I	CYCGRG	1 cut(s)	462
AoxI	GGCC	5 cut(s)	11, 732, 801, 823, 1182
ApaI	GGGCCC	1 cut(s)	805
ApaLI	GTGCAC	1 cut(s)	609
ApeKI	GCWGC	6 cut(s)	169, 172, 321, 416, 502, 1175
ApoI	RAATTY	4 cut(s)	837, 1154, 1400, 1595
Asp700I	GAANNNNTTC	1 cut(s)	1221
AspLEI	GCGC	2 cut(s)	76, 123
AspS9I	GGNCC	4 cut(s)	801, 802, 824, 1182
AsuHPI	GGTGA	4 cut(s)	567, 581, 739, 1246
AsuNHI	GCTAGC	1 cut(s)	625
AvaI	CYCGRG	1 cut(s)	462
BaeGI	GKGCMC	2 cut(s)	613, 805
BanII	GRGCYC	2 cut(s)	553, 805
BarI	GAAGNNNNNNTAC	2 cut(s)	29, 61
Bbv12I	GWGCWC	2 cut(s)	20, 613
BbvCI	CCTCAGC	2 cut(s)	662, 1494
BbvI	GCAGC	6 cut(s)	181, 184, 333, 403, 514, 1162
BccI	CCATC	6 cut(s)	179, 815, 900, 904, 1193, 1400
BciT130I	CCWGG	2 cut(s)	1232, 1584
BclI	TGATCA	1 cut(s)	721
BcoDI	GTCTC	1 cut(s)	9
BfaI	CTAG	2 cut(s)	554, 626
BfmI	CTRYAG	1 cut(s)	1430
BfuAI	ACCTGC	2 cut(s)	241, 925
BglII	AGATCT	1 cut(s)	1473
BmcAI	AGTACT	1 cut(s)	990
Bme1390I	CCNGG	2 cut(s)	1232, 1584
BmeT110I	CYCGRG	1 cut(s)	462
BmgT120I	GGNCC	4 cut(s)	801, 802, 824, 1182
BmiI	GGNNCC	2 cut(s)	803, 1360
BmrFI	CCNGG	2 cut(s)	1232, 1584
BmrI	ACTGGG	1 cut(s)	625
BmsI	GCATC	6 cut(s)	449, 781, 1012, 1044, 1099, 1522
BmtI	GCTAGC	1 cut(s)	629
BmuI	ACTGGG	1 cut(s)	625
BpmI	CTGGAG	2 cut(s)	1224, 1502
Bpu10I	CCTNAGC	2 cut(s)	662, 1494
BpuEI	CTTGAG	3 cut(s)	122, 1224, 1337
BsaBI	GATNNNNATC	1 cut(s)	1536
BsaHI	GRCGYC	2 cut(s)	63, 861
BsaJI	CCNNGG	3 cut(s)	27, 1286, 1582
BsaXI	ACNNNNNCTCC	4 cut(s)	1125, 1155, 1500, 1530
Bsc4I	CCNNNNNNNGG	5 cut(s)	33, 663, 1368, 1586, 1587
Bse118I	RCCGGY	1 cut(s)	350
Bse1I	ACTGG	2 cut(s)	631, 743
Bse3DI	GCAATG	2 cut(s)	243, 620
Bse8I	GATNNNNATC	1 cut(s)	1536
BseBI	CCWGG	2 cut(s)	1232, 1584
BseDI	CCNNGG	3 cut(s)	27, 1286, 1582
BseGI	GGATG	2 cut(s)	892, 1537
BseJI	GATNNNNATC	1 cut(s)	1536
BseLI	CCNNNNNNNGG	5 cut(s)	33, 663, 1368, 1586, 1587
BseMI	GCAATG	2 cut(s)	243, 620
BseMII	CTCAG	6 cut(s)	305, 444, 653, 831, 980, 1485
BseNI	ACTGG	2 cut(s)	631, 743
BseRI	GAGGAG	2 cut(s)	97, 160
BseSI	GKGCMC	2 cut(s)	613, 805
BseX3I	CGGCCG	1 cut(s)	11
BseXI	GCAGC	6 cut(s)	181, 184, 333, 403, 514, 1162
BseYI	CCCAGC	2 cut(s)	798, 1076
BsgI	GTGCAG	3 cut(s)	375, 504, 521
Bsh1236I	CGCG	3 cut(s)	74, 76, 123
Bsh1285I	CGRYCG	1 cut(s)	14
BshFI	GGCC	5 cut(s)	13, 734, 803, 825, 1184
BsiEI	CGRYCG	1 cut(s)	14
BsiHKAI	GWGCWC	2 cut(s)	20, 613
BsiHKCI	CYCGRG	1 cut(s)	462
BsiSI	CCGG	1 cut(s)	351
BslFI	GGGAC	1 cut(s)	344
BslI	CCNNNNNNNGG	5 cut(s)	33, 663, 1368, 1586, 1587
BsmAI	GTCTC	1 cut(s)	9
BsmFI	GGGAC	1 cut(s)	344
BsmI	GAATGC	1 cut(s)	673
BsnI	GGCC	5 cut(s)	13, 734, 803, 825, 1184
BsoBI	CYCGRG	1 cut(s)	462
Bsp120I	GGGCCC	1 cut(s)	801
Bsp1286I	GDGCHC	4 cut(s)	20, 553, 613, 805
Bsp143I	GATC	8 cut(s)	105, 262, 589, 721, 1208, 1264, 1282, 1473
BspACI	CCGC	8 cut(s)	10, 34, 76, 79, 707, 735, 1256, 1575
BspANI	GGCC	5 cut(s)	13, 734, 803, 825, 1184
BspCNI	CTCAG	6 cut(s)	304, 445, 654, 830, 979, 1486
BspFNI	CGCG	3 cut(s)	74, 76, 123
BspHI	TCATGA	1 cut(s)	1213
BspLI	GGNNCC	2 cut(s)	803, 1360
BspMAI	CTGCAG	1 cut(s)	1434
BspMI	ACCTGC	2 cut(s)	241, 925
BspOI	GCTAGC	1 cut(s)	629
BspPI	GGATC	4 cut(s)	257, 597, 1216, 1277
BsrBI	CCGCTC	2 cut(s)	1258, 1577
BsrDI	GCAATG	2 cut(s)	243, 620
BsrFI	RCCGGY	1 cut(s)	350
BsrI	ACTGG	2 cut(s)	631, 743
BssAI	RCCGGY	1 cut(s)	350
BssECI	CCNNGG	3 cut(s)	27, 1286, 1582
BssMI	GATC	8 cut(s)	105, 262, 589, 721, 1208, 1264, 1282, 1473
BssNAI	GTATAC	1 cut(s)	230
BssNI	GRCGYC	2 cut(s)	63, 861
BssT1I	CCWWGG	1 cut(s)	1286
Bst1107I	GTATAC	1 cut(s)	230
Bst2UI	CCWGG	2 cut(s)	1232, 1584
Bst4CI	ACNGT	5 cut(s)	131, 717, 907, 931, 1300
Bst6I	CTCTTC	2 cut(s)	137, 771
BstACI	GRCGYC	2 cut(s)	63, 861
BstAPI	GCANNNNNTGC	2 cut(s)	178, 394
BstC8I	GCNNGC	6 cut(s)	540, 627, 704, 796, 859, 1001
BstDEI	CTNAG	7 cut(s)	291, 453, 509, 662, 817, 966, 1494
BstF5I	GGATG	2 cut(s)	892, 1537
BstFNI	CGCG	3 cut(s)	74, 76, 123
BstHHI	GCGC	2 cut(s)	76, 123
BstKTI	GATC	8 cut(s)	108, 265, 592, 724, 1211, 1267, 1285, 1476
BstMAI	GTCTC	1 cut(s)	9
BstMBI	GATC	8 cut(s)	105, 262, 589, 721, 1208, 1264, 1282, 1473
BstMCI	CGRYCG	1 cut(s)	14
BstMWI	GCNNNNNNNGC	8 cut(s)	71, 178, 394, 422, 548, 800, 1000, 1181
BstNI	CCWGG	2 cut(s)	1232, 1584
BstNSI	RCATGY	1 cut(s)	1151
BstSCI	CCNGG	2 cut(s)	1230, 1582
BstSFI	CTRYAG	1 cut(s)	1430
BstSLI	GKGCMC	2 cut(s)	613, 805
BstUI	CGCG	3 cut(s)	74, 76, 123
BstV1I	GCAGC	6 cut(s)	181, 184, 333, 403, 514, 1162
BstX2I	RGATCY	4 cut(s)	589, 1208, 1282, 1473
BstXI	CCANNNNNNTGG	1 cut(s)	1526
BstYI	RGATCY	4 cut(s)	589, 1208, 1282, 1473
BstZ17I	GTATAC	1 cut(s)	230
BstZI	CGGCCG	1 cut(s)	11
BsuRI	GGCC	5 cut(s)	13, 734, 803, 825, 1184
BtgZI	GCGATG	1 cut(s)	966
BtsCI	GGATG	2 cut(s)	892, 1537
BtsI	GCAGTG	1 cut(s)	526
BtsIMutI	CAGTG	3 cut(s)	526, 936, 1305
BveI	ACCTGC	2 cut(s)	241, 925
Cac8I	GCNNGC	6 cut(s)	540, 627, 704, 796, 859, 1001
CciI	TCATGA	1 cut(s)	1213
CfoI	GCGC	2 cut(s)	76, 123
Cfr10I	RCCGGY	1 cut(s)	350
Cfr13I	GGNCC	4 cut(s)	801, 802, 824, 1182
CseI	GACGC	4 cut(s)	71, 80, 850, 1444
Csp6I	GTAC	3 cut(s)	46, 989, 1133
CspCI	CAANNNNNGTGG	2 cut(s)	700, 735
CviAII	CATG	8 cut(s)	420, 479, 658, 675, 1148, 1179, 1214, 1544
CviQI	GTAC	3 cut(s)	46, 989, 1133
DdeI	CTNAG	7 cut(s)	291, 453, 509, 662, 817, 966, 1494
DpnI	GATC	8 cut(s)	107, 264, 591, 723, 1210, 1266, 1284, 1475
DpnII	GATC	8 cut(s)	105, 262, 589, 721, 1208, 1264, 1282, 1473
DraIII	CACNNNGTG	1 cut(s)	608
DrdI	GACNNNNNNGTC	1 cut(s)	98
DseDI	GACNNNNNNGTC	1 cut(s)	98
EaeI	YGGCCR	1 cut(s)	11
EagI	CGGCCG	1 cut(s)	11
Eam1104I	CTCTTC	2 cut(s)	137, 771
EarI	CTCTTC	2 cut(s)	137, 771
EciI	GGCGGA	1 cut(s)	94
EclXI	CGGCCG	1 cut(s)	11
Eco130I	CCWWGG	1 cut(s)	1286
Eco24I	GRGCYC	2 cut(s)	553, 805
Eco52I	CGGCCG	1 cut(s)	11
Eco57I	CTGAAG	1 cut(s)	1349
Eco88I	CYCGRG	1 cut(s)	462
EcoO109I	RGGNCCY	1 cut(s)	802
EcoRI	GAATTC	1 cut(s)	1154
EcoRII	CCWGG	2 cut(s)	1230, 1582
EcoT14I	CCWWGG	1 cut(s)	1286
EcoT38I	GRGCYC	2 cut(s)	553, 805
ErhI	CCWWGG	1 cut(s)	1286
FaeI	CATG	8 cut(s)	423, 482, 661, 678, 1151, 1182, 1217, 1547
FaqI	GGGAC	1 cut(s)	344
FatI	CATG	8 cut(s)	419, 478, 657, 674, 1147, 1178, 1213, 1543
FbaI	TGATCA	1 cut(s)	721
FblI	GTMKAC	1 cut(s)	229
FokI	GGATG	2 cut(s)	879, 1544
FriOI	GRGCYC	2 cut(s)	553, 805
FspBI	CTAG	2 cut(s)	554, 626
GlaI	GCGC	2 cut(s)	75, 122
GsaI	CCCAGC	2 cut(s)	802, 1080
GsuI	CTGGAG	2 cut(s)	1224, 1502
HaeIII	GGCC	5 cut(s)	13, 734, 803, 825, 1184
HapII	CCGG	1 cut(s)	351
HgaI	GACGC	4 cut(s)	71, 80, 850, 1444
HhaI	GCGC	2 cut(s)	76, 123
Hin1I	GRCGYC	2 cut(s)	63, 861
Hin1II	CATG	8 cut(s)	423, 482, 661, 678, 1151, 1182, 1217, 1547
Hin6I	GCGC	2 cut(s)	74, 121
HinP1I	GCGC	2 cut(s)	74, 121
HincII	GTYRAC	1 cut(s)	869
HindII	GTYRAC	1 cut(s)	869
HindIII	AAGCTT	1 cut(s)	1047
HinfI	GANTC	6 cut(s)	572, 956, 964, 1222, 1237, 1426
HpaII	CCGG	1 cut(s)	351
HphI	GGTGA	4 cut(s)	567, 581, 739, 1246
Hpy166II	GTNNAC	4 cut(s)	61, 230, 611, 869
Hpy188I	TCNGA	5 cut(s)	454, 533, 820, 927, 1329
Hpy8I	GTNNAC	4 cut(s)	61, 230, 611, 869
Hpy99I	CGWCG	3 cut(s)	71, 74, 212
HpyAV	CCTTC	5 cut(s)	724, 932, 1304, 1324, 1456
HpyCH4III	ACNGT	5 cut(s)	131, 717, 907, 931, 1300
HpyF10VI	GCNNNNNNNGC	8 cut(s)	71, 178, 394, 422, 548, 800, 1000, 1181
HpyF3I	CTNAG	7 cut(s)	291, 453, 509, 662, 817, 966, 1494
Hsp92I	GRCGYC	2 cut(s)	63, 861
Hsp92II	CATG	8 cut(s)	423, 482, 661, 678, 1151, 1182, 1217, 1547
HspAI	GCGC	2 cut(s)	74, 121
Ksp22I	TGATCA	1 cut(s)	721
Kzo9I	GATC	8 cut(s)	105, 262, 589, 721, 1208, 1264, 1282, 1473
LmnI	GCTCC	4 cut(s)	880, 894, 1358, 1582
Lsp1109I	GCAGC	6 cut(s)	181, 184, 333, 403, 514, 1162
LweI	GCATC	6 cut(s)	449, 781, 1012, 1044, 1099, 1522
MaeI	CTAG	2 cut(s)	554, 626
MaeIII	GTNAC	4 cut(s)	569, 943, 1234, 1294
MalI	GATC	8 cut(s)	107, 264, 591, 723, 1210, 1266, 1284, 1475
MbiI	CCGCTC	2 cut(s)	1258, 1577
MboI	GATC	8 cut(s)	105, 262, 589, 721, 1208, 1264, 1282, 1473
MboII	GAAGA	9 cut(s)	49, 124, 154, 740, 788, 1429, 1483, 1511, 1514
MfeI	CAATTG	4 cut(s)	176, 275, 312, 330
MflI	RGATCY	4 cut(s)	589, 1208, 1282, 1473
MhlI	GDGCHC	4 cut(s)	20, 553, 613, 805
MlyI	GAGTC	4 cut(s)	566, 950, 958, 1231
MmeI	TCCRAC	3 cut(s)	201, 1034, 1168
MroXI	GAANNNNTTC	1 cut(s)	1221
MseI	TTAA	2 cut(s)	635, 1251
MspA1I	CMGCKG	1 cut(s)	1076
MspI	CCGG	1 cut(s)	351
MspR9I	CCNGG	2 cut(s)	1232, 1584
MunI	CAATTG	4 cut(s)	176, 275, 312, 330
Mva1269I	GAATGC	1 cut(s)	673
MvaI	CCWGG	2 cut(s)	1232, 1584
MvnI	CGCG	3 cut(s)	74, 76, 123
MwoI	GCNNNNNNNGC	8 cut(s)	71, 178, 394, 422, 548, 800, 1000, 1181
NdeII	GATC	8 cut(s)	105, 262, 589, 721, 1208, 1264, 1282, 1473
NheI	GCTAGC	1 cut(s)	625
NlaIII	CATG	8 cut(s)	423, 482, 661, 678, 1151, 1182, 1217, 1547
NlaIV	GGNNCC	2 cut(s)	803, 1360
NmeAIII	GCCGAG	1 cut(s)	39
NmuCI	GTSAC	2 cut(s)	569, 1234
NspI	RCATGY	1 cut(s)	1151
PaeR7I	CTCGAG	1 cut(s)	462
PagI	TCATGA	1 cut(s)	1213
PctI	GAATGC	1 cut(s)	673
PdmI	GAANNNNTTC	1 cut(s)	1221
PfeI	GAWTC	2 cut(s)	1222, 1426
PleI	GAGTC	4 cut(s)	566, 950, 958, 1231
PpsI	GAGTC	4 cut(s)	566, 950, 958, 1231
Psp6I	CCWGG	2 cut(s)	1230, 1582
PspFI	CCCAGC	2 cut(s)	798, 1076
PspGI	CCWGG	2 cut(s)	1230, 1582
PspN4I	GGNNCC	2 cut(s)	803, 1360
PspOMI	GGGCCC	1 cut(s)	801
PspPI	GGNCC	4 cut(s)	801, 802, 824, 1182
PspXI	VCTCGAGB	1 cut(s)	462
PstI	CTGCAG	1 cut(s)	1434
PsuI	RGATCY	4 cut(s)	589, 1208, 1282, 1473
PvuII	CAGCTG	1 cut(s)	1076
RsaI	GTAC	3 cut(s)	47, 990, 1134
RsaNI	GTAC	3 cut(s)	46, 989, 1133
SaqAI	TTAA	2 cut(s)	635, 1251
Sau3AI	GATC	8 cut(s)	105, 262, 589, 721, 1208, 1264, 1282, 1473
Sau96I	GGNCC	4 cut(s)	801, 802, 824, 1182
ScaI	AGTACT	1 cut(s)	990
SchI	GAGTC	4 cut(s)	566, 950, 958, 1231
ScrFI	CCNGG	2 cut(s)	1232, 1584
SduI	GDGCHC	4 cut(s)	20, 553, 613, 805
SfaNI	GCATC	6 cut(s)	449, 781, 1012, 1044, 1099, 1522
SfcI	CTRYAG	1 cut(s)	1430
Sfr274I	CTCGAG	1 cut(s)	462
SlaI	CTCGAG	1 cut(s)	462
SmlI	CTYRAG	4 cut(s)	137, 462, 1239, 1316
SmoI	CTYRAG	4 cut(s)	137, 462, 1239, 1316
SsiI	CCGC	8 cut(s)	10, 34, 76, 79, 707, 735, 1256, 1575
SspI	AATATT	2 cut(s)	940, 1069
SspMI	CTAG	2 cut(s)	554, 626
StyD4I	CCNGG	2 cut(s)	1230, 1582
StyI	CCWWGG	1 cut(s)	1286
TaaI	ACNGT	5 cut(s)	131, 717, 907, 931, 1300
TaqI	TCGA	6 cut(s)	102, 183, 210, 364, 463, 1158
TatI	WGTACW	1 cut(s)	988
TauI	GCSGC	4 cut(s)	13, 79, 709, 737
TfiI	GAWTC	2 cut(s)	1222, 1426
Tru1I	TTAA	2 cut(s)	635, 1251
Tru9I	TTAA	2 cut(s)	635, 1251
TscAI	CASTG	3 cut(s)	526, 936, 1305
TseFI	GTSAC	2 cut(s)	569, 1234
TseI	GCWGC	6 cut(s)	169, 172, 321, 416, 502, 1175
Tsp45I	GTSAC	2 cut(s)	569, 1234
TspDTI	ATGAA	5 cut(s)	654, 789, 1230, 1413, 1521
TspRI	CASTG	3 cut(s)	526, 936, 1305
VneI	GTGCAC	1 cut(s)	609
XapI	RAATTY	4 cut(s)	837, 1154, 1400, 1595
XceI	RCATGY	1 cut(s)	1151
XhoI	CTCGAG	1 cut(s)	462
XmiI	GTMKAC	1 cut(s)	229
XmnI	GAANNNNTTC	1 cut(s)	1221
XspI	CTAG	2 cut(s)	554, 626
ZrmI	AGTACT	1 cut(s)	990

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.