Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0002649

Physical Location & Seq

Genomic Coordinates Reverse (-)

38918994 .. 38924466

Gene Structure 5473 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000029452

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2370 bp

ATGGTTGCAGACTCGTGGTTTCGCAGTCTCTGGAGGACAAAAAAGAAGCACGAGGATGGTCCTGAGAAAGCAGTGATTGGAGTTTTGGCCTTTGAAGTAGCAAGCTTGATGTCTAAGCTAGTCCAGTTATGGCAATTTCTGGGTGATAAACAAGTGGCTAGGGTCAGAGAGGAAATTTCAAATTCGGTGGGTATAAGAAAGCTGGTGTCAGATGATGATGATTATATTGGAGGTTTAATATGCATCGAGTTGTTCGAGAATATGGTCCGTGTGGCAAAATCTGTGGACAGGCTTGGGAAGAATTGTACTGATCCTGGTTTGAAGGGTTTTGAGACTGCTATTAGTGATTTGATCAATTACAGTGTTGACACTTATGGATGGCAATTATCATGGAAAAAGATGGAGAGGAAGGCCAAGAAGATGGAGAGGTTCATTTCAATAAATGCAAATTTGTATGAAGAGATGGAAGTTCTTTCAGAGCTTGAACAGACGTTGAAGAGAATGAAAGGCAGTGGTGACTTAGATGGTGTTGATTTGCCGGAGTTTCAAAAGAAGGTAGTGTGGAAGCGGCAGGAGGTGAAGAATTTGAAAGAGGCCTCTCTGTGGAACAGAACTTATGACTATACAGTCCTCCTTTTAGCAAGATCTCTGTTCACAATATTCGGTAGGATCAAGCATGTCTTTGGAGTTCAACAGATGGTAGATGGTGGATCCAAAGATTCTGATCACATTAGTCGTAGTCATTCAGTGTCTGCAATAATACAGCCTTCAGTCCAACCATCTGAGAACAGTCTTCCAAGATTTGCCTCAGGTCCCCTTGGGAGGTTTGCTGCTACATCAGGGCCAATTTCGAAAACACACAAAACCAACAATTTCTTTTCAGGCCCTCTTGGTGGCTCAAGCACAAAATCAGGCCCTATTTCAGCAAAAAAGAAAGACGTCAACTTCTTTTCAGGTCCTCTTGGGAAGTCAACAAAATCAGGCCCAATTGCTGCAACTAATAGAACCTTCAGGAAGTTCTGGAAGTCTCGTGATCACTCAGTCACTAATGGTGAGAAGAAACCACCTACAAAGCCCAACAGGTTGACTCAAGTTGGACCTTTTAAAGGATGCATGATAAGCAATTCACCTGTCACCAATTGCTACTTGAATTCAGATGGTGTTCGTTCAGCAATTCTCAATGTAGCCAGAGATGCCAATGGAGACATTTTGGCTTCTGGCAGCAAACTTCATCCTAGTTCATCAGTCTTCAGTTCCAAATACAAATTGTTGGATGCTCCACCTGAAACCCTTGGTGCTGCTGCCTTAGCACTGCACTATGCAAATGTTGTTATTGTAATTGAGAAGTTAGTTGCATCTCCTCACTTGATTGGTCTTGATGCGAGAGATGACCTGTACAATATGTTGCCTGCAAGTGTGAGAGCTGCACTAAGGGCAAGGCTAAAGCCATACAGTAAGAGCTTAACTTCATCAGTTTACGATACAGTTCTTGCAGGAGAGTGGAATGAGGCAATGGCGGGGATATTAGAATGGTTGGCACCACTTGCTCATAACATGATAAGATGGCAGTCCGAAAGGAGCTTTGAACAGCAAACCTTGGTTTCCAGGACACATGTTCTTCTGGTTCAAACCCTCTACTTTGCAAATCAACAGAAAACAGAAGCAACAATTACAGAGCTTCTTGTTGGTTTGAATTACATCTGGAGGTTTGGCAGAGAAGTCAATGCAAAAGCGCTGTTAGATTGTGATAATCTCAAGACTACCCGCATTGAGCCAATGCTCTTACCTGGCTTGTCGATGAGGTTGCTGGATGCTGCTGGACAGATTGATAATTGCATGGTCCAGGAGAGACAATCAGCTATTTTTAATATCGTTGTATTAAAAGGCATCCTTGCCCAGCGAGCACCTGCCGAGAGCTGCCGAGCATCGGCCGAGCCCCTGCCGAGCAGCTGCCGACACCTGCCGAGCATCTGCCGAGCACCTGCCGACACCTGCCGAGCACCTGCCGACACCTGCCGACACCTGCCGACACCTGCCGAGCATCTGCCGACACCTGCCGAGCATCTGCCGACACCTGCCGACACCTGCCGAGACCCTGCCGAGCAGCTGCCGAGACCTGCCGAGCACCTGCCGACACCTGCCGACACCTGCCGATACCTGCCGAGCAGCTGCCGAGACCTGCCGAGCACCTGCCGACACCTGCCGAGCACCTGCCCGACACCTGCCGACACCTGCCGAGCACCTGCCGAGCACCTGCCGAGACCTGTCGACACCTGCCGAGCACCTGCCGATAGCTGCCTAGCACCTGCCGACACCTGCCGAGGCCCCTGCCGAGAAGCTGCCGACAGCCCTGCATACACCTGCCGATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3475 DUF668

Protein Analysis

790

Amino Acids

86.99

Weight (kDa)

8.97

Isoelectric Point (pI)

42.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF3475	PF11961	28 - 83	7.2e-24	Domain of unknown function (DUF3475)
DUF668	PF05003	430 - 521	3.4e-35	Protein of unknown function (DUF668)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002649)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G04550 AT5G04550
fragaria_vesca	FvH4_3g07590 FvH4_7g06360 FvH4_7g06360 FvH4_7g06360 FvH4_7g06360 FvH4_7g06360 FvH4_7g06360 FvH4_7g06360
malus_domestica	MD02G1244700.v1.1 MD07G1072400.v1.1
prunus_persica	Prupe.2G090600_v2.0.a1
pyrus_communis	pycom02g21060 pycom07g05560
rosa_chinensis	RchiOBHm_Chr1g0334451 RchiOBHm_Chr5g0011101 RchiOBHm_Chr5g0011111
rosa_laevigata	RLG00000029452 RLG00000031810 RLG00000031811
rosa_multiflora	Rmu_ssc0000404.1_g000013
rosa_roxburghii	Rroxscaffold_1G00065290 Rroxscaffold_1G00065300 Rroxscaffold_1G00065310 Rroxscaffold_4G00316830
rosa_rugosa	Rorug01G0113900 Rorug01G0114000 Rorug04G0455200
rosa_samantha	Rh1AG139100 Rh1BG105400 Rh1CG131100 Rh1DG143000 Rh5AG087500 Rh5CG095100 Rh5CG095200 Rh5DG081900
rosa_wichuraiana	Rw0G000190 Rw0G017760 Rw1G011470

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	626
AatII	GACGTC	1 cut(s)	942
AccB1I	GGYRCC	1 cut(s)	1537
AccI	GTMKAC	1 cut(s)	2268
AciI	CCGC	3 cut(s)	568, 1517, 1765
AclWI	GGATC	4 cut(s)	305, 677, 705, 718
AcoI	YGGCCR	1 cut(s)	1929
AcsI	RAATTY	5 cut(s)	174, 181, 448, 583, 1150
AcuI	CTGAAG	3 cut(s)	753, 994, 1234
AcyI	GRCGYC	1 cut(s)	939
AfaI	GTAC	2 cut(s)	307, 1397
AfeI	AGCGCT	1 cut(s)	1734
AfiI	CCNNNNNNNGG	5 cut(s)	603, 822, 893, 1106, 1927
AflIII	ACRYGT	1 cut(s)	1612
AjnI	CCWGG	4 cut(s)	313, 1604, 1786, 1842
Alw21I	GWGCWC	9 cut(s)	1906, 1981, 2002, 2127, 2189, 2210, 2242, 2253, 2284
Alw26I	GTCTC	9 cut(s)	32, 326, 1032, 1197, 1843, 2085, 2107, 2169, 2254
AlwI	GGATC	4 cut(s)	305, 677, 705, 718
AlwNI	CAGNNNCTG	2 cut(s)	30, 752
Aor51HI	AGCGCT	1 cut(s)	1734
AoxI	GGCC	9 cut(s)	87, 411, 594, 842, 883, 913, 982, 1929, 2323
ApoI	RAATTY	5 cut(s)	174, 181, 448, 583, 1150
AspLEI	GCGC	1 cut(s)	1735
AsuHPI	GGTGA	6 cut(s)	155, 527, 589, 1064, 1119, 1126
AsuII	TTCGAA	1 cut(s)	851
AvaII	GGWCC	6 cut(s)	59, 265, 812, 956, 1097, 1840
AxyI	CCTNAGG	1 cut(s)	808
BamHI	GGATCC	1 cut(s)	710
BanI	GGYRCC	1 cut(s)	1537
BanII	GRGCYC	1 cut(s)	1938
BauI	CACGAG	3 cut(s)	13, 50, 1029
BbsI	GAAGAC	2 cut(s)	785, 1240
Bbv12I	GWGCWC	9 cut(s)	1906, 1981, 2002, 2127, 2189, 2210, 2242, 2253, 2284
BcgI	CGANNNNNNTGC	6 cut(s)	1786, 1820, 2310, 2333, 2344, 2367
BciT130I	CCWGG	4 cut(s)	315, 1606, 1788, 1844
BclI	TGATCA	3 cut(s)	351, 724, 1033
BcoDI	GTCTC	9 cut(s)	32, 326, 1032, 1197, 1843, 2085, 2107, 2169, 2254
BfaI	CTAG	4 cut(s)	119, 159, 1236, 2300
BfoI	RGCGCY	1 cut(s)	1736
BglII	AGATCT	1 cut(s)	644
Bme1390I	CCNGG	4 cut(s)	315, 1606, 1788, 1844
Bme18I	GGWCC	6 cut(s)	59, 265, 812, 956, 1097, 1840
BmiI	GGNNCC	4 cut(s)	712, 814, 1539, 2326
BmrFI	CCNGG	4 cut(s)	315, 1606, 1788, 1844
BpiI	GAAGAC	2 cut(s)	785, 1240
BpmI	CTGGAG	2 cut(s)	52, 1723
Bpu10I	CCTNAGC	1 cut(s)	1306
Bpu14I	TTCGAA	1 cut(s)	851
BpuEI	CTTGAG	3 cut(s)	883, 1074, 1739
BsaBI	GATNNNNATC	1 cut(s)	723
BsaHI	GRCGYC	1 cut(s)	939
BsaI	GGTCTC	4 cut(s)	2085, 2107, 2169, 2254
BsaJI	CCNNGG	4 cut(s)	817, 1291, 1596, 2320
Bsc4I	CCNNNNNNNGG	5 cut(s)	603, 822, 893, 1106, 1927
Bse1I	ACTGG	1 cut(s)	124
Bse21I	CCTNAGG	1 cut(s)	808
Bse3DI	GCAATG	1 cut(s)	1518
Bse8I	GATNNNNATC	1 cut(s)	723
BseBI	CCWGG	4 cut(s)	315, 1606, 1788, 1844
BseDI	CCNNGG	4 cut(s)	817, 1291, 1596, 2320
BseGI	GGATG	7 cut(s)	61, 383, 1115, 1231, 1279, 1816, 1887
BseJI	GATNNNNATC	1 cut(s)	723
BseLI	CCNNNNNNNGG	5 cut(s)	603, 822, 893, 1106, 1927
BseMI	GCAATG	1 cut(s)	1518
BseMII	CTCAG	4 cut(s)	54, 774, 822, 1053
BseNI	ACTGG	1 cut(s)	124
BseRI	GAGGAG	1 cut(s)	1350
BseX3I	CGGCCG	1 cut(s)	1929
BseYI	CCCAGC	1 cut(s)	1896
BsgI	GTGCAG	2 cut(s)	1298, 1410
Bsh1285I	CGRYCG	1 cut(s)	1932
BshFI	GGCC	9 cut(s)	89, 413, 596, 844, 885, 915, 984, 1931, 2325
BshNI	GGYRCC	1 cut(s)	1537
BsiEI	CGRYCG	1 cut(s)	1932
BsiHKAI	GWGCWC	9 cut(s)	1906, 1981, 2002, 2127, 2189, 2210, 2242, 2253, 2284
BsiSI	CCGG	1 cut(s)	539
BslFI	GGGAC	1 cut(s)	798
BslI	CCNNNNNNNGG	5 cut(s)	603, 822, 893, 1106, 1927
BsmAI	GTCTC	9 cut(s)	32, 326, 1032, 1197, 1843, 2085, 2107, 2169, 2254
BsmFI	GGGAC	1 cut(s)	798
BsnI	GGCC	9 cut(s)	89, 413, 596, 844, 885, 915, 984, 1931, 2325
Bso31I	GGTCTC	4 cut(s)	2085, 2107, 2169, 2254
Bsp119I	TTCGAA	1 cut(s)	851
Bsp1407I	TGTACA	1 cut(s)	1395
Bsp143I	GATC	7 cut(s)	310, 351, 644, 669, 710, 724, 1033
BspACI	CCGC	3 cut(s)	568, 1517, 1765
BspANI	GGCC	9 cut(s)	89, 413, 596, 844, 885, 915, 984, 1931, 2325
BspCNI	CTCAG	4 cut(s)	55, 775, 821, 1052
BspLI	GGNNCC	4 cut(s)	712, 814, 1539, 2326
BspPI	GGATC	4 cut(s)	305, 677, 705, 718
BspT104I	TTCGAA	1 cut(s)	851
BspT107I	GGYRCC	1 cut(s)	1537
BspTNI	GGTCTC	4 cut(s)	2085, 2107, 2169, 2254
BsrDI	GCAATG	1 cut(s)	1518
BsrGI	TGTACA	1 cut(s)	1395
BsrI	ACTGG	1 cut(s)	124
BssECI	CCNNGG	4 cut(s)	817, 1291, 1596, 2320
BssMI	GATC	7 cut(s)	310, 351, 644, 669, 710, 724, 1033
BssNI	GRCGYC	1 cut(s)	939
BssSI	CACGAG	3 cut(s)	13, 50, 1029
BssT1I	CCWWGG	3 cut(s)	817, 1291, 1596
Bst2BI	CACGAG	3 cut(s)	13, 50, 1029
Bst2UI	CCWGG	4 cut(s)	315, 1606, 1788, 1844
Bst4CI	ACNGT	5 cut(s)	362, 628, 791, 1454, 1486
Bst6I	CTCTTC	2 cut(s)	453, 491
BstACI	GRCGYC	1 cut(s)	939
BstAPI	GCANNNNNTGC	1 cut(s)	1544
BstAUI	TGTACA	1 cut(s)	1395
BstBI	TTCGAA	1 cut(s)	851
BstC8I	GCNNGC	3 cut(s)	103, 1410, 1902
BstDEI	CTNAG	8 cut(s)	63, 114, 520, 783, 808, 1039, 1306, 1430
BstENI	CCTNNNNNAGG	1 cut(s)	1104
BstF5I	GGATG	7 cut(s)	61, 383, 1115, 1231, 1279, 1816, 1887
BstH2I	RGCGCY	1 cut(s)	1736
BstHHI	GCGC	1 cut(s)	1735
BstKTI	GATC	7 cut(s)	313, 354, 647, 672, 713, 727, 1036
BstMAI	GTCTC	9 cut(s)	32, 326, 1032, 1197, 1843, 2085, 2107, 2169, 2254
BstMBI	GATC	7 cut(s)	310, 351, 644, 669, 710, 724, 1033
BstMCI	CGRYCG	1 cut(s)	1932
BstMWI	GCNNNNNNNGC	6 cut(s)	1119, 1193, 1307, 1433, 1544, 1901
BstNI	CCWGG	4 cut(s)	315, 1606, 1788, 1844
BstNSI	RCATGY	2 cut(s)	680, 1616
BstSCI	CCNGG	4 cut(s)	313, 1604, 1786, 1842
BstV2I	GAAGAC	2 cut(s)	785, 1240
BstX2I	RGATCY	2 cut(s)	644, 710
BstXI	CCANNNNNNTGG	1 cut(s)	421
BstYI	RGATCY	2 cut(s)	644, 710
BstZI	CGGCCG	1 cut(s)	1929
Bsu36I	CCTNAGG	1 cut(s)	808
BsuRI	GGCC	9 cut(s)	89, 413, 596, 844, 885, 915, 984, 1931, 2325
BtsCI	GGATG	7 cut(s)	61, 383, 1115, 1231, 1279, 1816, 1887
BtsI	GCAGTG	3 cut(s)	78, 517, 1310
BtsIMutI	CAGTG	5 cut(s)	78, 367, 517, 753, 1310
Cac8I	GCNNGC	3 cut(s)	103, 1410, 1902
CaiI	CAGNNNCTG	2 cut(s)	30, 752
CfoI	GCGC	1 cut(s)	1735
Csp6I	GTAC	2 cut(s)	306, 1396
CspCI	CAANNNNNGTGG	4 cut(s)	168, 203, 264, 299
CviAII	CATG	6 cut(s)	390, 677, 1114, 1555, 1613, 1837
CviQI	GTAC	2 cut(s)	306, 1396
DdeI	CTNAG	8 cut(s)	63, 114, 520, 783, 808, 1039, 1306, 1430
DpnI	GATC	7 cut(s)	312, 353, 646, 671, 712, 726, 1035
DpnII	GATC	7 cut(s)	310, 351, 644, 669, 710, 724, 1033
DraI	TTTAAA	1 cut(s)	1105
DrdI	GACNNNNNNGTC	1 cut(s)	626
DseDI	GACNNNNNNGTC	1 cut(s)	626
EaeI	YGGCCR	1 cut(s)	1929
EagI	CGGCCG	1 cut(s)	1929
Eam1104I	CTCTTC	2 cut(s)	453, 491
EarI	CTCTTC	2 cut(s)	453, 491
EclXI	CGGCCG	1 cut(s)	1929
Eco130I	CCWWGG	3 cut(s)	817, 1291, 1596
Eco147I	AGGCCT	1 cut(s)	596
Eco24I	GRGCYC	1 cut(s)	1938
Eco31I	GGTCTC	4 cut(s)	2085, 2107, 2169, 2254
Eco47I	GGWCC	6 cut(s)	59, 265, 812, 956, 1097, 1840
Eco47III	AGCGCT	1 cut(s)	1734
Eco52I	CGGCCG	1 cut(s)	1929
Eco57I	CTGAAG	3 cut(s)	753, 994, 1234
Eco81I	CCTNAGG	1 cut(s)	808
EcoNI	CCTNNNNNAGG	1 cut(s)	1104
EcoO109I	RGGNCCY	5 cut(s)	812, 884, 914, 956, 2324
EcoRI	GAATTC	1 cut(s)	1150
EcoRII	CCWGG	4 cut(s)	313, 1604, 1786, 1842
EcoT14I	CCWWGG	3 cut(s)	817, 1291, 1596
EcoT22I	ATGCAT	2 cut(s)	245, 1115
EcoT38I	GRGCYC	1 cut(s)	1938
ErhI	CCWWGG	3 cut(s)	817, 1291, 1596
FaeI	CATG	6 cut(s)	393, 680, 1117, 1558, 1616, 1840
FalI	AAGNNNNNCTT	4 cut(s)	665, 697, 1875, 1907
FaqI	GGGAC	1 cut(s)	798
FatI	CATG	6 cut(s)	389, 676, 1113, 1554, 1612, 1836
FauI	CCCGC	2 cut(s)	1510, 1772
FbaI	TGATCA	3 cut(s)	351, 724, 1033
FblI	GTMKAC	1 cut(s)	2268
FokI	GGATG	7 cut(s)	68, 390, 1122, 1218, 1286, 1823, 1874
FriOI	GRGCYC	1 cut(s)	1938
FspBI	CTAG	4 cut(s)	119, 159, 1236, 2300
GlaI	GCGC	1 cut(s)	1734
GsaI	CCCAGC	1 cut(s)	1900
GsuI	CTGGAG	2 cut(s)	52, 1723
HaeII	RGCGCY	1 cut(s)	1736
HaeIII	GGCC	9 cut(s)	89, 413, 596, 844, 885, 915, 984, 1931, 2325
HapII	CCGG	1 cut(s)	539
HhaI	GCGC	1 cut(s)	1735
Hin1I	GRCGYC	1 cut(s)	939
Hin1II	CATG	6 cut(s)	393, 680, 1117, 1558, 1616, 1840
Hin6I	GCGC	1 cut(s)	1733
HinP1I	GCGC	1 cut(s)	1733
HincII	GTYRAC	5 cut(s)	367, 943, 972, 1086, 2269
HindII	GTYRAC	5 cut(s)	367, 943, 972, 1086, 2269
HindIII	AAGCTT	1 cut(s)	103
HinfI	GANTC	3 cut(s)	11, 719, 1087
HpaII	CCGG	1 cut(s)	539
HphI	GGTGA	6 cut(s)	155, 527, 589, 1064, 1119, 1126
Hpy166II	GTNNAC	8 cut(s)	286, 367, 654, 943, 972, 1086, 1477, 2269
Hpy188I	TCNGA	7 cut(s)	167, 211, 478, 724, 784, 1156, 1573
Hpy188III	TCNNGA	9 cut(s)	31, 62, 256, 1012, 1021, 1031, 1376, 1702, 1756
Hpy8I	GTNNAC	8 cut(s)	286, 367, 654, 943, 972, 1086, 1477, 2269
HpyAV	CCTTC	5 cut(s)	316, 403, 547, 777, 1018
HpyCH4III	ACNGT	5 cut(s)	362, 628, 791, 1454, 1486
HpyCH4IV	ACGT	2 cut(s)	491, 939
HpyF10VI	GCNNNNNNNGC	6 cut(s)	1119, 1193, 1307, 1433, 1544, 1901
HpyF3I	CTNAG	8 cut(s)	63, 114, 520, 783, 808, 1039, 1306, 1430
HpySE526I	ACGT	2 cut(s)	491, 939
Hsp92I	GRCGYC	1 cut(s)	939
Hsp92II	CATG	6 cut(s)	393, 680, 1117, 1558, 1616, 1840
HspAI	GCGC	1 cut(s)	1733
Ksp22I	TGATCA	3 cut(s)	351, 724, 1033
Kzo9I	GATC	7 cut(s)	310, 351, 644, 669, 710, 724, 1033
LmnI	GCTCC	2 cut(s)	1282, 1578
MaeI	CTAG	4 cut(s)	119, 159, 1236, 2300
MaeII	ACGT	2 cut(s)	491, 939
MaeIII	GTNAC	3 cut(s)	515, 1042, 1132
MalI	GATC	7 cut(s)	312, 353, 646, 671, 712, 726, 1035
MboI	GATC	7 cut(s)	310, 351, 644, 669, 710, 724, 1033
MboII	GAAGA	9 cut(s)	310, 430, 470, 508, 592, 785, 1069, 1240, 1610
MfeI	CAATTG	2 cut(s)	987, 1138
MflI	RGATCY	2 cut(s)	644, 710
MlyI	GAGTC	2 cut(s)	5, 1081
MmeI	TCCRAC	3 cut(s)	799, 1075, 1251
Mph1103I	ATGCAT	2 cut(s)	245, 1115
MseI	TTAA	5 cut(s)	236, 1104, 1463, 1866, 1880
MslI	CAYNNNNRTG	1 cut(s)	54
MspA1I	CMGCKG	3 cut(s)	1950, 2107, 2169
MspI	CCGG	1 cut(s)	539
MspR9I	CCNGG	4 cut(s)	315, 1606, 1788, 1844
MunI	CAATTG	2 cut(s)	987, 1138
MvaI	CCWGG	4 cut(s)	315, 1606, 1788, 1844
MwoI	GCNNNNNNNGC	6 cut(s)	1119, 1193, 1307, 1433, 1544, 1901
NdeII	GATC	7 cut(s)	310, 351, 644, 669, 710, 724, 1033
NlaIII	CATG	6 cut(s)	393, 680, 1117, 1558, 1616, 1840
NlaIV	GGNNCC	4 cut(s)	712, 814, 1539, 2326
NmuCI	GTSAC	3 cut(s)	515, 1042, 1132
NsiI	ATGCAT	2 cut(s)	245, 1115
NspI	RCATGY	2 cut(s)	680, 1616
NspV	TTCGAA	1 cut(s)	851
PceI	AGGCCT	1 cut(s)	596
PciI	ACATGT	1 cut(s)	1612
PcsI	WCGNNNNNNNCGW	1 cut(s)	252
PfeI	GAWTC	1 cut(s)	719
PfoI	TCCNGGA	2 cut(s)	1604, 1842
PleI	GAGTC	2 cut(s)	5, 1081
PpsI	GAGTC	2 cut(s)	5, 1081
PpuMI	RGGWCCY	2 cut(s)	812, 956
PscI	ACATGT	1 cut(s)	1612
Psp5II	RGGWCCY	2 cut(s)	812, 956
Psp6I	CCWGG	4 cut(s)	313, 1604, 1786, 1842
PspFI	CCCAGC	1 cut(s)	1896
PspGI	CCWGG	4 cut(s)	313, 1604, 1786, 1842
PspN4I	GGNNCC	4 cut(s)	712, 814, 1539, 2326
PspPPI	RGGWCCY	2 cut(s)	812, 956
PstNI	CAGNNNCTG	2 cut(s)	30, 752
PsuI	RGATCY	2 cut(s)	644, 710
PvuII	CAGCTG	3 cut(s)	1950, 2107, 2169
RsaI	GTAC	2 cut(s)	307, 1397
RsaNI	GTAC	2 cut(s)	306, 1396
RseI	CAYNNNNRTG	1 cut(s)	54
SalI	GTCGAC	1 cut(s)	2267
SaqAI	TTAA	5 cut(s)	236, 1104, 1463, 1866, 1880
Sau3AI	GATC	7 cut(s)	310, 351, 644, 669, 710, 724, 1033
SchI	GAGTC	2 cut(s)	5, 1081
ScrFI	CCNGG	4 cut(s)	315, 1606, 1788, 1844
SfuI	TTCGAA	1 cut(s)	851
SinI	GGWCC	6 cut(s)	59, 265, 812, 956, 1097, 1840
SmiMI	CAYNNNNRTG	1 cut(s)	54
SmlI	CTYRAG	3 cut(s)	898, 1089, 1754
SmoI	CTYRAG	3 cut(s)	898, 1089, 1754
SseBI	AGGCCT	1 cut(s)	596
SsiI	CCGC	3 cut(s)	568, 1517, 1765
SspI	AATATT	1 cut(s)	660
SspMI	CTAG	4 cut(s)	119, 159, 1236, 2300
StuI	AGGCCT	1 cut(s)	596
StyD4I	CCNGG	4 cut(s)	313, 1604, 1786, 1842
StyI	CCWWGG	3 cut(s)	817, 1291, 1596
TaaI	ACNGT	5 cut(s)	362, 628, 791, 1454, 1486
TaiI	ACGT	2 cut(s)	494, 942
TaqI	TCGA	5 cut(s)	246, 255, 851, 1796, 2268
TatI	WGTACW	2 cut(s)	305, 1395
TauI	GCSGC	1 cut(s)	571
TfiI	GAWTC	1 cut(s)	719
Tru1I	TTAA	5 cut(s)	236, 1104, 1463, 1866, 1880
Tru9I	TTAA	5 cut(s)	236, 1104, 1463, 1866, 1880
TscAI	CASTG	5 cut(s)	78, 367, 517, 753, 1317
TseFI	GTSAC	3 cut(s)	515, 1042, 1132
Tsp45I	GTSAC	3 cut(s)	515, 1042, 1132
TspDTI	ATGAA	6 cut(s)	421, 471, 518, 1220, 1230, 1458
TspGWI	ACGGA	1 cut(s)	257
TspRI	CASTG	5 cut(s)	78, 367, 517, 753, 1317
VpaK11BI	GGWCC	6 cut(s)	59, 265, 812, 956, 1097, 1840
XagI	CCTNNNNNAGG	1 cut(s)	1104
XapI	RAATTY	5 cut(s)	174, 181, 448, 583, 1150
XceI	RCATGY	2 cut(s)	680, 1616
XmiI	GTMKAC	1 cut(s)	2268
XspI	CTAG	4 cut(s)	119, 159, 1236, 2300
ZraI	GACGTC	1 cut(s)	940
Zsp2I	ATGCAT	2 cut(s)	245, 1115

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.