Contains the following InterPro domains WD40 repeat 2 (InterPro IPR019782), WD40 repeat-like-containing domain (InterPro IPR011046), WD40 repeat, conserved site (InterPro IPR019775), WD40-repeat-containing domain (InterPro IPR017986), WD40 YVTN repeat-like-containing domain (InterPro IPR015943), WD40 repeat (InterPro IPR001680), WD40 repeat, subgroup (InterPro IPR019781)
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0013651 RchiOBHm_Chr7g0197761 |
| rosa_laevigata | RLG00000032036 |
| rosa_roxburghii | Rroxscaffold_1G00062960 Rroxscaffold_2G00125920 |
| rosa_rugosa | Rorug02G0448100 Rorug04G0327200 Rorug05G0011500 |
| rosa_samantha | Rh1CG069900 Rh1DG074500 Rh2DG534400 Rh3AG163500 Rh3AG171800 Rh3BG189000 Rh3BG197200 Rh3BG240300 Rh3CG179000 Rh3CG188200 Rh4DG175900 Rh5CG114300 Rh5DG101000 Rh6DG325400 Rh7AG273400 Rh7CG176000 Rh7CG292500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 397 |
| AclWI | GGATC | 3 cut(s) | 113, 167, 501 |
| AfaI | GTAC | 1 cut(s) | 418 |
| AgsI | TTSAA | 1 cut(s) | 224 |
| AluBI | AGCT | 3 cut(s) | 47, 310, 474 |
| AluI | AGCT | 3 cut(s) | 47, 310, 474 |
| Alw26I | GTCTC | 3 cut(s) | 258, 461, 507 |
| AlwI | GGATC | 3 cut(s) | 113, 167, 501 |
| Ama87I | CYCGRG | 1 cut(s) | 510 |
| ApeKI | GCWGC | 1 cut(s) | 500 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 476, 508 |
| AspS9I | GGNCC | 1 cut(s) | 229 |
| AvaI | CYCGRG | 1 cut(s) | 510 |
| AvaII | GGWCC | 1 cut(s) | 229 |
| BbvI | GCAGC | 1 cut(s) | 512 |
| BciVI | GTATCC | 1 cut(s) | 177 |
| BcoDI | GTCTC | 3 cut(s) | 258, 461, 507 |
| BfmI | CTRYAG | 1 cut(s) | 115 |
| BfuI | GTATCC | 1 cut(s) | 177 |
| BisI | GCNGC | 1 cut(s) | 501 |
| BlsI | GCNGC | 1 cut(s) | 502 |
| Bme18I | GGWCC | 1 cut(s) | 229 |
| BmeT110I | CYCGRG | 1 cut(s) | 510 |
| BmgT120I | GGNCC | 1 cut(s) | 229 |
| BmiI | GGNNCC | 1 cut(s) | 284 |
| BmsI | GCATC | 2 cut(s) | 49, 70 |
| BplI | GAGNNNNNCTC | 1 cut(s) | 38 |
| BpmI | CTGGAG | 1 cut(s) | 393 |
| BsaI | GGTCTC | 1 cut(s) | 461 |
| BsaJI | CCNNGG | 1 cut(s) | 101 |
| Bse1I | ACTGG | 2 cut(s) | 231, 393 |
| Bse3DI | GCAATG | 1 cut(s) | 445 |
| BseDI | CCNNGG | 1 cut(s) | 101 |
| BseMI | GCAATG | 1 cut(s) | 445 |
| BseMII | CTCAG | 1 cut(s) | 411 |
| BseNI | ACTGG | 2 cut(s) | 231, 393 |
| BseRI | GAGGAG | 1 cut(s) | 390 |
| BseXI | GCAGC | 1 cut(s) | 512 |
| BsiHKCI | CYCGRG | 1 cut(s) | 510 |
| BsmAI | GTCTC | 3 cut(s) | 258, 461, 507 |
| BsmBI | CGTCTC | 1 cut(s) | 507 |
| Bso31I | GGTCTC | 1 cut(s) | 461 |
| BsoBI | CYCGRG | 1 cut(s) | 510 |
| Bsp143I | GATC | 4 cut(s) | 105, 172, 412, 506 |
| Bsp19I | CCATGG | 1 cut(s) | 101 |
| BspCNI | CTCAG | 1 cut(s) | 412 |
| BspLI | GGNNCC | 1 cut(s) | 284 |
| BspPI | GGATC | 3 cut(s) | 113, 167, 501 |
| BspTNI | GGTCTC | 1 cut(s) | 461 |
| BsrDI | GCAATG | 1 cut(s) | 445 |
| BsrI | ACTGG | 2 cut(s) | 231, 393 |
| BssECI | CCNNGG | 1 cut(s) | 101 |
| BssMI | GATC | 4 cut(s) | 105, 172, 412, 506 |
| BssNAI | GTATAC | 1 cut(s) | 398 |
| BssT1I | CCWWGG | 1 cut(s) | 101 |
| Bst1107I | GTATAC | 1 cut(s) | 398 |
| BstC8I | GCNNGC | 1 cut(s) | 85 |
| BstDEI | CTNAG | 1 cut(s) | 420 |
| BstDSI | CCRYGG | 1 cut(s) | 101 |
| BstKTI | GATC | 4 cut(s) | 108, 175, 415, 509 |
| BstMAI | GTCTC | 3 cut(s) | 258, 461, 507 |
| BstMBI | GATC | 4 cut(s) | 105, 172, 412, 506 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 316 |
| BstNSI | RCATGY | 1 cut(s) | 87 |
| BstSFI | CTRYAG | 1 cut(s) | 115 |
| BstV1I | GCAGC | 1 cut(s) | 512 |
| BstX2I | RGATCY | 2 cut(s) | 172, 506 |
| BstYI | RGATCY | 2 cut(s) | 172, 506 |
| BstZ17I | GTATAC | 1 cut(s) | 398 |
| BsuI | GTATCC | 1 cut(s) | 177 |
| BtgI | CCRYGG | 1 cut(s) | 101 |
| BtsI | GCAGTG | 1 cut(s) | 267 |
| BtsIMutI | CAGTG | 2 cut(s) | 267, 470 |
| Cac8I | GCNNGC | 1 cut(s) | 85 |
| Cfr13I | GGNCC | 1 cut(s) | 229 |
| Csp6I | GTAC | 1 cut(s) | 417 |
| CviAII | CATG | 3 cut(s) | 84, 102, 451 |
| CviJI | RGCY | 4 cut(s) | 47, 310, 338, 474 |
| CviKI_1 | RGCY | 4 cut(s) | 47, 310, 338, 474 |
| CviQI | GTAC | 1 cut(s) | 417 |
| DdeI | CTNAG | 1 cut(s) | 420 |
| DpnI | GATC | 4 cut(s) | 107, 174, 414, 508 |
| DpnII | GATC | 4 cut(s) | 105, 172, 412, 506 |
| Eco130I | CCWWGG | 1 cut(s) | 101 |
| Eco31I | GGTCTC | 1 cut(s) | 461 |
| Eco47I | GGWCC | 1 cut(s) | 229 |
| Eco88I | CYCGRG | 1 cut(s) | 510 |
| EcoT14I | CCWWGG | 1 cut(s) | 101 |
| EcoT22I | ATGCAT | 1 cut(s) | 85 |
| ErhI | CCWWGG | 1 cut(s) | 101 |
| Esp3I | CGTCTC | 1 cut(s) | 507 |
| FaeI | CATG | 3 cut(s) | 87, 105, 454 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 160, 192 |
| FatI | CATG | 3 cut(s) | 83, 101, 450 |
| FauNDI | CATATG | 1 cut(s) | 496 |
| FblI | GTMKAC | 1 cut(s) | 397 |
| Fnu4HI | GCNGC | 1 cut(s) | 501 |
| Fsp4HI | GCNGC | 1 cut(s) | 501 |
| GluI | GCNGC | 1 cut(s) | 501 |
| GsuI | CTGGAG | 1 cut(s) | 393 |
| Hin1II | CATG | 3 cut(s) | 87, 105, 454 |
| HinfI | GANTC | 3 cut(s) | 193, 199, 332 |
| Hpy166II | GTNNAC | 1 cut(s) | 398 |
| Hpy188I | TCNGA | 4 cut(s) | 57, 198, 331, 347 |
| Hpy188III | TCNNGA | 1 cut(s) | 510 |
| Hpy8I | GTNNAC | 1 cut(s) | 398 |
| HpyAV | CCTTC | 1 cut(s) | 186 |
| HpyCH4IV | ACGT | 1 cut(s) | 246 |
| HpyCH4V | TGCA | 4 cut(s) | 40, 71, 83, 500 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 316 |
| HpyF3I | CTNAG | 1 cut(s) | 420 |
| HpySE526I | ACGT | 1 cut(s) | 246 |
| Hsp92II | CATG | 3 cut(s) | 87, 105, 454 |
| Kzo9I | GATC | 4 cut(s) | 105, 172, 412, 506 |
| LpnPI | CCDG | 4 cut(s) | 212, 312, 357, 374 |
| Lsp1109I | GCAGC | 1 cut(s) | 512 |
| LweI | GCATC | 2 cut(s) | 49, 70 |
| MaeII | ACGT | 1 cut(s) | 246 |
| MaeIII | GTNAC | 3 cut(s) | 88, 211, 247 |
| MalI | GATC | 4 cut(s) | 107, 174, 414, 508 |
| MboI | GATC | 4 cut(s) | 105, 172, 412, 506 |
| MboII | GAAGA | 1 cut(s) | 531 |
| MflI | RGATCY | 2 cut(s) | 172, 506 |
| MluCI | AATT | 4 cut(s) | 26, 66, 241, 528 |
| MlyI | GAGTC | 1 cut(s) | 193 |
| MnlI | CCTC | 1 cut(s) | 368 |
| Mph1103I | ATGCAT | 1 cut(s) | 85 |
| MseI | TTAA | 1 cut(s) | 294 |
| MslI | CAYNNNNRTG | 1 cut(s) | 254 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 316 |
| NcoI | CCATGG | 1 cut(s) | 101 |
| NdeI | CATATG | 1 cut(s) | 496 |
| NdeII | GATC | 4 cut(s) | 105, 172, 412, 506 |
| NlaIII | CATG | 3 cut(s) | 87, 105, 454 |
| NlaIV | GGNNCC | 1 cut(s) | 284 |
| NmuCI | GTSAC | 2 cut(s) | 211, 247 |
| NsiI | ATGCAT | 1 cut(s) | 85 |
| NspI | RCATGY | 1 cut(s) | 87 |
| PaeI | GCATGC | 1 cut(s) | 87 |
| PfeI | GAWTC | 2 cut(s) | 193, 332 |
| PkrI | GCNGC | 1 cut(s) | 502 |
| PleI | GAGTC | 1 cut(s) | 193 |
| PpsI | GAGTC | 1 cut(s) | 193 |
| PspN4I | GGNNCC | 1 cut(s) | 284 |
| PspPI | GGNCC | 1 cut(s) | 229 |
| PsuI | RGATCY | 2 cut(s) | 172, 506 |
| RsaI | GTAC | 1 cut(s) | 418 |
| RsaNI | GTAC | 1 cut(s) | 417 |
| RseI | CAYNNNNRTG | 1 cut(s) | 254 |
| SaqAI | TTAA | 1 cut(s) | 294 |
| SatI | GCNGC | 1 cut(s) | 501 |
| Sau3AI | GATC | 4 cut(s) | 105, 172, 412, 506 |
| Sau96I | GGNCC | 1 cut(s) | 229 |
| SchI | GAGTC | 1 cut(s) | 193 |
| SetI | ASST | 5 cut(s) | 49, 249, 288, 312, 476 |
| SfaNI | GCATC | 2 cut(s) | 49, 70 |
| SfcI | CTRYAG | 1 cut(s) | 115 |
| SinI | GGWCC | 1 cut(s) | 229 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 254 |
| SphI | GCATGC | 1 cut(s) | 87 |
| Sse9I | AATT | 4 cut(s) | 26, 66, 241, 528 |
| StyI | CCWWGG | 1 cut(s) | 101 |
| TaiI | ACGT | 1 cut(s) | 249 |
| TaqI | TCGA | 1 cut(s) | 108 |
| TasI | AATT | 4 cut(s) | 26, 66, 241, 528 |
| TfiI | GAWTC | 2 cut(s) | 193, 332 |
| Tru1I | TTAA | 1 cut(s) | 294 |
| Tru9I | TTAA | 1 cut(s) | 294 |
| TscAI | CASTG | 2 cut(s) | 274, 470 |
| TseFI | GTSAC | 2 cut(s) | 211, 247 |
| TseI | GCWGC | 1 cut(s) | 500 |
| Tsp45I | GTSAC | 2 cut(s) | 211, 247 |
| TspDTI | ATGAA | 3 cut(s) | 156, 195, 272 |
| TspGWI | ACGGA | 1 cut(s) | 531 |
| TspRI | CASTG | 2 cut(s) | 274, 470 |
| VpaK11BI | GGWCC | 1 cut(s) | 229 |
| XceI | RCATGY | 1 cut(s) | 87 |
| XmiI | GTMKAC | 1 cut(s) | 397 |
| Zsp2I | ATGCAT | 1 cut(s) | 85 |