Auxin responsive protein
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD09G1046700.v1.1 |
| pyrus_communis | pycom111g03710 |
| rosa_chinensis | RchiOBHm_Chr6g0247011 RchiOBHm_Chr6g0267921 RchiOBHm_Chr6g0283081 RchiOBHm_Chr7g0224431 |
| rosa_laevigata | RLG00000033406 |
| rosa_multiflora | Rmu_co8039672.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00052870 Rroxscaffold_1G00056630 Rroxscaffold_7G00200330 |
| rosa_rugosa | Rorug01G0308200 Rorug05G0026500 Rorug06G0035300 |
| rosa_samantha | Rh1CG188000 Rh1CG188100 Rh3BG368100 Rh3CG241300 Rh6AG192600 Rh6BG158200 Rh6BG158500 Rh6CG157800 Rh6CG158000 Rh6CG195900 Rh6DG143400 Rh6DG143500 Rh6DG143800 Rh6DG143900 Rh6DG144200 Rh6DG164200 Rh6DG220100 |
| rosa_wichuraiana | Rw3G019330 Rw6G013640 Rw6G013670 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 324 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 352 |
| Acc36I | ACCTGC | 1 cut(s) | 324 |
| AccII | CGCG | 2 cut(s) | 145, 147 |
| AciI | CCGC | 2 cut(s) | 108, 120 |
| AfaI | GTAC | 1 cut(s) | 132 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 87 |
| AgsI | TTSAA | 1 cut(s) | 22 |
| AjnI | CCWGG | 1 cut(s) | 298 |
| AluBI | AGCT | 5 cut(s) | 25, 152, 276, 285, 316 |
| AluI | AGCT | 5 cut(s) | 25, 152, 276, 285, 316 |
| ApeKI | GCWGC | 2 cut(s) | 264, 273 |
| AspLEI | GCGC | 1 cut(s) | 147 |
| AsuHPI | GGTGA | 1 cut(s) | 40 |
| BbvI | GCAGC | 2 cut(s) | 251, 285 |
| BccI | CCATC | 2 cut(s) | 48, 178 |
| BciT130I | CCWGG | 1 cut(s) | 300 |
| BciVI | GTATCC | 1 cut(s) | 84 |
| BfmI | CTRYAG | 3 cut(s) | 235, 271, 292 |
| BfuAI | ACCTGC | 1 cut(s) | 324 |
| BfuI | GTATCC | 1 cut(s) | 84 |
| BisI | GCNGC | 2 cut(s) | 265, 274 |
| BlsI | GCNGC | 2 cut(s) | 266, 275 |
| Bme1390I | CCNGG | 1 cut(s) | 300 |
| BmrFI | CCNGG | 1 cut(s) | 300 |
| BmsI | GCATC | 1 cut(s) | 276 |
| BpuEI | CTTGAG | 1 cut(s) | 181 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 87 |
| Bse118I | RCCGGY | 1 cut(s) | 97 |
| BseBI | CCWGG | 1 cut(s) | 300 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 87 |
| BseMII | CTCAG | 1 cut(s) | 194 |
| BseXI | GCAGC | 2 cut(s) | 251, 285 |
| Bsh1236I | CGCG | 2 cut(s) | 145, 147 |
| BsiSI | CCGG | 1 cut(s) | 98 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 87 |
| Bsp143I | GATC | 1 cut(s) | 9 |
| BspACI | CCGC | 2 cut(s) | 108, 120 |
| BspCNI | CTCAG | 1 cut(s) | 193 |
| BspFNI | CGCG | 2 cut(s) | 145, 147 |
| BspMAI | CTGCAG | 1 cut(s) | 275 |
| BspMI | ACCTGC | 1 cut(s) | 324 |
| BsrFI | RCCGGY | 1 cut(s) | 97 |
| BssAI | RCCGGY | 1 cut(s) | 97 |
| BssMI | GATC | 1 cut(s) | 9 |
| Bst2UI | CCWGG | 1 cut(s) | 300 |
| Bst4CI | ACNGT | 1 cut(s) | 293 |
| BstC8I | GCNNGC | 2 cut(s) | 108, 305 |
| BstDEI | CTNAG | 2 cut(s) | 180, 324 |
| BstEII | GGTNACC | 1 cut(s) | 46 |
| BstFNI | CGCG | 2 cut(s) | 145, 147 |
| BstHHI | GCGC | 1 cut(s) | 147 |
| BstKTI | GATC | 1 cut(s) | 12 |
| BstMBI | GATC | 1 cut(s) | 9 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 107, 270, 273, 282, 313 |
| BstNI | CCWGG | 1 cut(s) | 300 |
| BstNSI | RCATGY | 1 cut(s) | 210 |
| BstPI | GGTNACC | 1 cut(s) | 46 |
| BstSCI | CCNGG | 1 cut(s) | 298 |
| BstSFI | CTRYAG | 3 cut(s) | 235, 271, 292 |
| BstUI | CGCG | 2 cut(s) | 145, 147 |
| BstV1I | GCAGC | 2 cut(s) | 251, 285 |
| BsuI | GTATCC | 1 cut(s) | 84 |
| BveI | ACCTGC | 1 cut(s) | 324 |
| Cac8I | GCNNGC | 2 cut(s) | 108, 305 |
| CfoI | GCGC | 1 cut(s) | 147 |
| Cfr10I | RCCGGY | 1 cut(s) | 97 |
| Csp6I | GTAC | 1 cut(s) | 131 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 84, 119 |
| CviAII | CATG | 2 cut(s) | 124, 207 |
| CviQI | GTAC | 1 cut(s) | 131 |
| DdeI | CTNAG | 2 cut(s) | 180, 324 |
| DpnI | GATC | 1 cut(s) | 11 |
| DpnII | GATC | 1 cut(s) | 9 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 352 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 352 |
| EciI | GGCGGA | 1 cut(s) | 109 |
| Eco91I | GGTNACC | 1 cut(s) | 46 |
| EcoO65I | GGTNACC | 1 cut(s) | 46 |
| EcoRII | CCWGG | 1 cut(s) | 298 |
| EcoT22I | ATGCAT | 1 cut(s) | 212 |
| FaeI | CATG | 2 cut(s) | 127, 210 |
| FaiI | YATR | 5 cut(s) | 68, 125, 208, 212, 237 |
| FatI | CATG | 2 cut(s) | 123, 206 |
| FauI | CCCGC | 1 cut(s) | 115 |
| Fnu4HI | GCNGC | 2 cut(s) | 265, 274 |
| Fsp4HI | GCNGC | 2 cut(s) | 265, 274 |
| GlaI | GCGC | 1 cut(s) | 146 |
| GluI | GCNGC | 2 cut(s) | 265, 274 |
| HapII | CCGG | 1 cut(s) | 98 |
| HhaI | GCGC | 1 cut(s) | 147 |
| Hin1II | CATG | 2 cut(s) | 127, 210 |
| Hin6I | GCGC | 1 cut(s) | 145 |
| HinP1I | GCGC | 1 cut(s) | 145 |
| HindIII | AAGCTT | 1 cut(s) | 314 |
| HinfI | GANTC | 1 cut(s) | 36 |
| HpaII | CCGG | 1 cut(s) | 98 |
| HphI | GGTGA | 1 cut(s) | 40 |
| Hpy188I | TCNGA | 3 cut(s) | 14, 29, 183 |
| Hpy188III | TCNNGA | 1 cut(s) | 374 |
| HpyAV | CCTTC | 1 cut(s) | 121 |
| HpyCH4III | ACNGT | 1 cut(s) | 293 |
| HpyCH4V | TGCA | 5 cut(s) | 127, 210, 267, 273, 333 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 107, 270, 273, 282, 313 |
| HpyF3I | CTNAG | 2 cut(s) | 180, 324 |
| Hsp92II | CATG | 2 cut(s) | 127, 210 |
| HspAI | GCGC | 1 cut(s) | 145 |
| Kzo9I | GATC | 1 cut(s) | 9 |
| LpnPI | CCDG | 6 cut(s) | 111, 285, 289, 312, 319, 359 |
| Lsp1109I | GCAGC | 2 cut(s) | 251, 285 |
| LweI | GCATC | 1 cut(s) | 276 |
| MaeIII | GTNAC | 2 cut(s) | 46, 287 |
| MalI | GATC | 1 cut(s) | 11 |
| MboI | GATC | 1 cut(s) | 9 |
| MboII | GAAGA | 1 cut(s) | 52 |
| MluCI | AATT | 1 cut(s) | 242 |
| MlyI | GAGTC | 1 cut(s) | 30 |
| MnlI | CCTC | 5 cut(s) | 8, 74, 156, 331, 344 |
| Mph1103I | ATGCAT | 1 cut(s) | 212 |
| MspA1I | CMGCKG | 1 cut(s) | 285 |
| MspI | CCGG | 1 cut(s) | 98 |
| MspR9I | CCNGG | 1 cut(s) | 300 |
| MvaI | CCWGG | 1 cut(s) | 300 |
| MvnI | CGCG | 2 cut(s) | 145, 147 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 107, 270, 273, 282, 313 |
| NdeII | GATC | 1 cut(s) | 9 |
| NlaIII | CATG | 2 cut(s) | 127, 210 |
| NmuCI | GTSAC | 1 cut(s) | 46 |
| NsiI | ATGCAT | 1 cut(s) | 212 |
| NspI | RCATGY | 1 cut(s) | 210 |
| PaqCI | CACCTGC | 1 cut(s) | 324 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 49, 144 |
| PflFI | GACNNNGTC | 1 cut(s) | 39 |
| PkrI | GCNGC | 2 cut(s) | 266, 275 |
| PleI | GAGTC | 1 cut(s) | 30 |
| PpsI | GAGTC | 1 cut(s) | 30 |
| Psp6I | CCWGG | 1 cut(s) | 298 |
| PspEI | GGTNACC | 1 cut(s) | 46 |
| PspGI | CCWGG | 1 cut(s) | 298 |
| PstI | CTGCAG | 1 cut(s) | 275 |
| PsyI | GACNNNGTC | 1 cut(s) | 39 |
| PvuII | CAGCTG | 1 cut(s) | 285 |
| RsaI | GTAC | 1 cut(s) | 132 |
| RsaNI | GTAC | 1 cut(s) | 131 |
| SatI | GCNGC | 2 cut(s) | 265, 274 |
| Sau3AI | GATC | 1 cut(s) | 9 |
| SchI | GAGTC | 1 cut(s) | 30 |
| ScrFI | CCNGG | 1 cut(s) | 300 |
| SetI | ASST | 9 cut(s) | 19, 27, 154, 167, 278, 287, 318, 323, 338 |
| SfaNI | GCATC | 1 cut(s) | 276 |
| SfcI | CTRYAG | 3 cut(s) | 235, 271, 292 |
| SmlI | CTYRAG | 1 cut(s) | 160 |
| SmoI | CTYRAG | 1 cut(s) | 160 |
| Sse9I | AATT | 1 cut(s) | 242 |
| SsiI | CCGC | 2 cut(s) | 108, 120 |
| StyD4I | CCNGG | 1 cut(s) | 298 |
| TaaI | ACNGT | 1 cut(s) | 293 |
| TasI | AATT | 1 cut(s) | 242 |
| TatI | WGTACW | 1 cut(s) | 130 |
| TseFI | GTSAC | 1 cut(s) | 46 |
| TseI | GCWGC | 2 cut(s) | 264, 273 |
| Tsp45I | GTSAC | 1 cut(s) | 46 |
| TspDTI | ATGAA | 2 cut(s) | 103, 211 |
| TspGWI | ACGGA | 1 cut(s) | 103 |
| Tth111I | GACNNNGTC | 1 cut(s) | 39 |
| XceI | RCATGY | 1 cut(s) | 210 |
| Zsp2I | ATGCAT | 1 cut(s) | 212 |