Hypersensitive-induced response protein
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD09G1046700.v1.1 |
| pyrus_communis | pycom111g03710 |
| rosa_chinensis | RchiOBHm_Chr6g0247011 RchiOBHm_Chr6g0267921 RchiOBHm_Chr6g0283081 RchiOBHm_Chr7g0224431 |
| rosa_laevigata | RLG00000033406 |
| rosa_multiflora | Rmu_co8039672.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00052870 Rroxscaffold_1G00056630 Rroxscaffold_7G00200330 |
| rosa_rugosa | Rorug01G0308200 Rorug05G0026500 Rorug06G0035300 |
| rosa_samantha | Rh1CG188000 Rh1CG188100 Rh3BG368100 Rh3CG241300 Rh6AG192600 Rh6BG158200 Rh6BG158500 Rh6CG157800 Rh6CG158000 Rh6CG195900 Rh6DG143400 Rh6DG143500 Rh6DG143800 Rh6DG143900 Rh6DG144200 Rh6DG164200 Rh6DG220100 |
| rosa_wichuraiana | Rw3G019330 Rw6G013640 Rw6G013670 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 353 |
| AcsI | RAATTY | 1 cut(s) | 216 |
| AflII | CTTAAG | 1 cut(s) | 17 |
| AgsI | TTSAA | 2 cut(s) | 401, 508 |
| AjnI | CCWGG | 1 cut(s) | 339 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 488, 520 |
| AluBI | AGCT | 3 cut(s) | 16, 106, 446 |
| AluI | AGCT | 3 cut(s) | 16, 106, 446 |
| Alw21I | GWGCWC | 2 cut(s) | 88, 108 |
| Alw26I | GTCTC | 1 cut(s) | 282 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 446 |
| ApoI | RAATTY | 1 cut(s) | 216 |
| AspS9I | GGNCC | 2 cut(s) | 193, 346 |
| AvaII | GGWCC | 2 cut(s) | 193, 346 |
| BanII | GRGCYC | 1 cut(s) | 108 |
| Bbv12I | GWGCWC | 2 cut(s) | 88, 108 |
| BbvCI | CCTCAGC | 1 cut(s) | 262 |
| BccI | CCATC | 2 cut(s) | 100, 204 |
| BciT130I | CCWGG | 1 cut(s) | 341 |
| BciVI | GTATCC | 1 cut(s) | 347 |
| BcoDI | GTCTC | 1 cut(s) | 282 |
| BfrI | CTTAAG | 1 cut(s) | 17 |
| BfuI | GTATCC | 1 cut(s) | 347 |
| BglII | AGATCT | 1 cut(s) | 227 |
| BlpI | GCTNAGC | 1 cut(s) | 107 |
| Bme1390I | CCNGG | 1 cut(s) | 341 |
| Bme18I | GGWCC | 2 cut(s) | 193, 346 |
| BmgT120I | GGNCC | 2 cut(s) | 193, 346 |
| BmrFI | CCNGG | 1 cut(s) | 341 |
| BmsI | GCATC | 1 cut(s) | 303 |
| Bpu10I | CCTNAGC | 1 cut(s) | 262 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 107 |
| BsaJI | CCNNGG | 2 cut(s) | 328, 495 |
| Bse1I | ACTGG | 1 cut(s) | 349 |
| BseBI | CCWGG | 1 cut(s) | 341 |
| BseDI | CCNNGG | 2 cut(s) | 328, 495 |
| BseGI | GGATG | 2 cut(s) | 196, 485 |
| BseMII | CTCAG | 2 cut(s) | 121, 276 |
| BseNI | ACTGG | 1 cut(s) | 349 |
| BseRI | GAGGAG | 1 cut(s) | 78 |
| BsiHKAI | GWGCWC | 2 cut(s) | 88, 108 |
| BsmAI | GTCTC | 1 cut(s) | 282 |
| BsmI | GAATGC | 1 cut(s) | 266 |
| Bsp1286I | GDGCHC | 2 cut(s) | 88, 108 |
| Bsp143I | GATC | 1 cut(s) | 227 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 107 |
| BspCNI | CTCAG | 2 cut(s) | 120, 275 |
| BspTI | CTTAAG | 1 cut(s) | 17 |
| BsrI | ACTGG | 1 cut(s) | 349 |
| BssECI | CCNNGG | 2 cut(s) | 328, 495 |
| BssMI | GATC | 1 cut(s) | 227 |
| BssT1I | CCWWGG | 2 cut(s) | 328, 495 |
| Bst2UI | CCWGG | 1 cut(s) | 341 |
| Bst4CI | ACNGT | 5 cut(s) | 187, 289, 324, 358, 442 |
| BstAFI | CTTAAG | 1 cut(s) | 17 |
| BstC8I | GCNNGC | 2 cut(s) | 84, 142 |
| BstDEI | CTNAG | 3 cut(s) | 107, 262, 273 |
| BstF5I | GGATG | 2 cut(s) | 196, 485 |
| BstKTI | GATC | 1 cut(s) | 230 |
| BstMAI | GTCTC | 1 cut(s) | 282 |
| BstMBI | GATC | 1 cut(s) | 227 |
| BstNI | CCWGG | 1 cut(s) | 341 |
| BstSCI | CCNGG | 1 cut(s) | 339 |
| BstX2I | RGATCY | 1 cut(s) | 227 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 99 |
| BstYI | RGATCY | 1 cut(s) | 227 |
| BsuI | GTATCC | 1 cut(s) | 347 |
| BtgZI | GCGATG | 1 cut(s) | 280 |
| BtsCI | GGATG | 2 cut(s) | 196, 485 |
| BtsIMutI | CAGTG | 4 cut(s) | 33, 183, 285, 329 |
| Cac8I | GCNNGC | 2 cut(s) | 84, 142 |
| CaiI | CAGNNNCTG | 1 cut(s) | 446 |
| Cfr13I | GGNCC | 2 cut(s) | 193, 346 |
| CviAII | CATG | 1 cut(s) | 207 |
| CviJI | RGCY | 3 cut(s) | 16, 106, 446 |
| CviKI_1 | RGCY | 3 cut(s) | 16, 106, 446 |
| DdeI | CTNAG | 3 cut(s) | 107, 262, 273 |
| DpnI | GATC | 1 cut(s) | 229 |
| DpnII | GATC | 1 cut(s) | 227 |
| Ecl136II | GAGCTC | 1 cut(s) | 106 |
| Eco130I | CCWWGG | 2 cut(s) | 328, 495 |
| Eco24I | GRGCYC | 1 cut(s) | 108 |
| Eco47I | GGWCC | 2 cut(s) | 193, 346 |
| Eco53kI | GAGCTC | 1 cut(s) | 106 |
| EcoICRI | GAGCTC | 1 cut(s) | 106 |
| EcoRII | CCWGG | 1 cut(s) | 339 |
| EcoT14I | CCWWGG | 2 cut(s) | 328, 495 |
| EcoT38I | GRGCYC | 1 cut(s) | 108 |
| ErhI | CCWWGG | 2 cut(s) | 328, 495 |
| FaeI | CATG | 1 cut(s) | 210 |
| FatI | CATG | 1 cut(s) | 206 |
| FblI | GTMKAC | 1 cut(s) | 353 |
| FokI | GGATG | 2 cut(s) | 183, 492 |
| FriOI | GRGCYC | 1 cut(s) | 108 |
| Hin1II | CATG | 1 cut(s) | 210 |
| HinfI | GANTC | 3 cut(s) | 302, 308, 371 |
| Hpy166II | GTNNAC | 3 cut(s) | 132, 346, 354 |
| Hpy188I | TCNGA | 3 cut(s) | 307, 313, 368 |
| Hpy188III | TCNNGA | 1 cut(s) | 231 |
| Hpy8I | GTNNAC | 3 cut(s) | 132, 346, 354 |
| HpyAV | CCTTC | 1 cut(s) | 550 |
| HpyCH4III | ACNGT | 5 cut(s) | 187, 289, 324, 358, 442 |
| HpyCH4V | TGCA | 5 cut(s) | 163, 183, 362, 438, 469 |
| HpyF3I | CTNAG | 3 cut(s) | 107, 262, 273 |
| Hsp92II | CATG | 1 cut(s) | 210 |
| Kzo9I | GATC | 1 cut(s) | 227 |
| LmnI | GCTCC | 2 cut(s) | 91, 103 |
| LpnPI | CCDG | 9 cut(s) | 150, 176, 216, 238, 326, 353, 362, 417, 432 |
| LweI | GCATC | 1 cut(s) | 303 |
| MalI | GATC | 1 cut(s) | 229 |
| MboI | GATC | 1 cut(s) | 227 |
| MflI | RGATCY | 1 cut(s) | 227 |
| MhlI | GDGCHC | 2 cut(s) | 88, 108 |
| MluCI | AATT | 5 cut(s) | 146, 202, 216, 473, 508 |
| MnlI | CCTC | 2 cut(s) | 99, 271 |
| MseI | TTAA | 3 cut(s) | 18, 54, 149 |
| MspCI | CTTAAG | 1 cut(s) | 17 |
| MspR9I | CCNGG | 1 cut(s) | 341 |
| Mva1269I | GAATGC | 1 cut(s) | 266 |
| MvaI | CCWGG | 1 cut(s) | 341 |
| NdeII | GATC | 1 cut(s) | 227 |
| NlaIII | CATG | 1 cut(s) | 210 |
| PctI | GAATGC | 1 cut(s) | 266 |
| PfeI | GAWTC | 3 cut(s) | 302, 308, 371 |
| Psp124BI | GAGCTC | 1 cut(s) | 108 |
| Psp6I | CCWGG | 1 cut(s) | 339 |
| PspGI | CCWGG | 1 cut(s) | 339 |
| PspPI | GGNCC | 2 cut(s) | 193, 346 |
| PstNI | CAGNNNCTG | 1 cut(s) | 446 |
| PsuI | RGATCY | 1 cut(s) | 227 |
| SacI | GAGCTC | 1 cut(s) | 108 |
| SaqAI | TTAA | 3 cut(s) | 18, 54, 149 |
| Sau3AI | GATC | 1 cut(s) | 227 |
| Sau96I | GGNCC | 2 cut(s) | 193, 346 |
| ScrFI | CCNGG | 1 cut(s) | 341 |
| SduI | GDGCHC | 2 cut(s) | 88, 108 |
| SfaNI | GCATC | 1 cut(s) | 303 |
| SinI | GGWCC | 2 cut(s) | 193, 346 |
| SmlI | CTYRAG | 1 cut(s) | 17 |
| SmoI | CTYRAG | 1 cut(s) | 17 |
| Sse9I | AATT | 5 cut(s) | 146, 202, 216, 473, 508 |
| SstI | GAGCTC | 1 cut(s) | 108 |
| StyD4I | CCNGG | 1 cut(s) | 339 |
| StyI | CCWWGG | 2 cut(s) | 328, 495 |
| TaaI | ACNGT | 5 cut(s) | 187, 289, 324, 358, 442 |
| TaqI | TCGA | 1 cut(s) | 65 |
| TasI | AATT | 5 cut(s) | 146, 202, 216, 473, 508 |
| TfiI | GAWTC | 3 cut(s) | 302, 308, 371 |
| Tru1I | TTAA | 3 cut(s) | 18, 54, 149 |
| Tru9I | TTAA | 3 cut(s) | 18, 54, 149 |
| TscAI | CASTG | 4 cut(s) | 40, 190, 292, 329 |
| TspDTI | ATGAA | 3 cut(s) | 17, 195, 270 |
| TspRI | CASTG | 4 cut(s) | 40, 190, 292, 329 |
| Vha464I | CTTAAG | 1 cut(s) | 17 |
| VpaK11BI | GGWCC | 2 cut(s) | 193, 346 |
| XapI | RAATTY | 1 cut(s) | 216 |
| XmiI | GTMKAC | 1 cut(s) | 353 |