Rmu_co8420089.1_g000001

BAH domain

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8420089.1
Physical Location & Seq
Forward (+)
298 .. 672
375 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8420089.1_g000001.1.cds

Sequence Viewer

Length: 375 bp
atgttgcatcctgaaaagatgaatatggaacaagattctgaatttaagtggggtgaaagacttggagttggtaggacaaacaaggatgttcggttctaccggtctttcacatttcagggcgtggagtactccctgtatgattccgtacacctctacaagactggcgctttggaaacagatattggtaagattatcaaaatttattccacagcaactgaaaagaaggttaggattgtgtggtttcttcggccagctgaaatatgcaactttttgggtgattatcaaccacactggaaagagatttttttagcttctggcgagggtacaggcctctccaatctgaatcctctggtaagtcaaatttcaattgaataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

124

Amino Acids

14.36

Weight (kDa)

6.3

Isoelectric Point (pI)

33.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 248
AcsI RAATTY 3 cut(s) 41, 198, 360
AfaI GTAC 3 cut(s) 128, 147, 325
AgeI ACCGGT 1 cut(s) 99
AgsI TTSAA 2 cut(s) 366, 371
AjuI GAANNNNNNNTTGG 2 cut(s) 165, 197
AloI GAACNNNNNNTCC 2 cut(s) 77, 109
AluBI AGCT 2 cut(s) 254, 311
AluI AGCT 2 cut(s) 254, 311
AlwNI CAGNNNCTG 1 cut(s) 215
AoxI GGCC 2 cut(s) 248, 328
ApoI RAATTY 3 cut(s) 41, 198, 360
ArsI GACNNNNNNTTYG 2 cut(s) 151, 183
AsiGI ACCGGT 1 cut(s) 99
AspLEI GCGC 1 cut(s) 167
AsuHPI GGTGA 2 cut(s) 65, 287
BfoI RGCGCY 1 cut(s) 168
BmcAI AGTACT 1 cut(s) 128
BmsI GCATC 1 cut(s) 16
BsaWI WCCGGW 1 cut(s) 99
Bse118I RCCGGY 1 cut(s) 99
Bse1I ACTGG 2 cut(s) 166, 296
BseGI GGATG 2 cut(s) 7, 91
BseNI ACTGG 2 cut(s) 166, 296
BshFI GGCC 2 cut(s) 250, 330
BshTI ACCGGT 1 cut(s) 99
BsiSI CCGG 1 cut(s) 100
BsnI GGCC 2 cut(s) 250, 330
BspANI GGCC 2 cut(s) 250, 330
BsrFI RCCGGY 1 cut(s) 99
BsrI ACTGG 2 cut(s) 166, 296
BssAI RCCGGY 1 cut(s) 99
BstC8I GCNNGC 1 cut(s) 252
BstF5I GGATG 2 cut(s) 7, 91
BstH2I RGCGCY 1 cut(s) 168
BstHHI GCGC 1 cut(s) 167
BsuRI GGCC 2 cut(s) 250, 330
BtsCI GGATG 2 cut(s) 7, 91
BtsIMutI CAGTG 1 cut(s) 289
Cac8I GCNNGC 1 cut(s) 252
CaiI CAGNNNCTG 1 cut(s) 215
CfoI GCGC 1 cut(s) 167
Cfr10I RCCGGY 1 cut(s) 99
Csp6I GTAC 3 cut(s) 127, 146, 324
CspAI ACCGGT 1 cut(s) 99
CviJI RGCY 4 cut(s) 250, 254, 311, 330
CviKI_1 RGCY 4 cut(s) 250, 254, 311, 330
CviQI GTAC 3 cut(s) 127, 146, 324
EaeI YGGCCR 1 cut(s) 248
Eco147I AGGCCT 1 cut(s) 330
FaiI YATR 3 cut(s) 26, 138, 262
FokI GGATG 1 cut(s) 98
GlaI GCGC 1 cut(s) 166
HaeII RGCGCY 1 cut(s) 168
HaeIII GGCC 2 cut(s) 250, 330
HapII CCGG 1 cut(s) 100
HhaI GCGC 1 cut(s) 167
Hin6I GCGC 1 cut(s) 165
HinP1I GCGC 1 cut(s) 165
HinfI GANTC 3 cut(s) 35, 140, 343
HpaII CCGG 1 cut(s) 100
HphI GGTGA 2 cut(s) 65, 287
Hpy166II GTNNAC 1 cut(s) 148
Hpy188I TCNGA 2 cut(s) 40, 342
Hpy188III TCNNGA 1 cut(s) 11
Hpy8I GTNNAC 1 cut(s) 148
HpyAV CCTTC 1 cut(s) 217
HpyCH4V TGCA 2 cut(s) 7, 264
HspAI GCGC 1 cut(s) 165
LweI GCATC 1 cut(s) 16
MboII GAAGA 1 cut(s) 236
MfeI CAATTG 1 cut(s) 366
MluCI AATT 4 cut(s) 41, 198, 360, 366
MnlI CCTC 4 cut(s) 161, 313, 341, 357
MseI TTAA 1 cut(s) 45
MspA1I CMGCKG 1 cut(s) 254
MspI CCGG 1 cut(s) 100
MunI CAATTG 1 cut(s) 366
PceI AGGCCT 1 cut(s) 330
PfeI GAWTC 3 cut(s) 35, 140, 343
PinAI ACCGGT 1 cut(s) 99
PstNI CAGNNNCTG 1 cut(s) 215
PvuII CAGCTG 1 cut(s) 254
RsaI GTAC 3 cut(s) 128, 147, 325
RsaNI GTAC 3 cut(s) 127, 146, 324
SaqAI TTAA 1 cut(s) 45
ScaI AGTACT 1 cut(s) 128
SetI ASST 4 cut(s) 153, 228, 256, 313
SfaNI GCATC 1 cut(s) 16
Sse9I AATT 4 cut(s) 41, 198, 360, 366
SseBI AGGCCT 1 cut(s) 330
StuI AGGCCT 1 cut(s) 330
TasI AATT 4 cut(s) 41, 198, 360, 366
TatI WGTACW 1 cut(s) 126
TfiI GAWTC 3 cut(s) 35, 140, 343
Tru1I TTAA 1 cut(s) 45
Tru9I TTAA 1 cut(s) 45
TscAI CASTG 1 cut(s) 296
TspDTI ATGAA 1 cut(s) 35
TspGWI ACGGA 1 cut(s) 133
TspRI CASTG 1 cut(s) 296
XapI RAATTY 3 cut(s) 41, 198, 360
ZrmI AGTACT 1 cut(s) 128
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.