Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0002843

Physical Location & Seq

Genomic Coordinates Forward (+)

41774999 .. 41776777

Gene Structure 1779 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0335800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1779 bp

ATGGGAGGGTGCTTTTCGGACGTCAGAGGAGGGAAGCAGGCAGTAGGGGGAGCGCAACAAAGGCCAATTAACTACGATGAGGATTGCAACGACGCCGTCGACTGCTTTAACAAGTCTCAGGGAGCTGTCCCACTATTCACTCCACTCGAGCTATCCTTCTCCGCCTCTAACTTACTTGATCGTGATTTCACTTCGAAGAGTGATCCCATGGTTGTCGTGTATGCAAACAAAGGATATGGAGATCACGAGGAATTAGGGAGAACTGAAGTAGTACTGAATAATCTGAATCCCTCTTGGATAGAGAAAGTTAGAGCTGCATATCATTTCGAGTTTGTACAGCCGTTGCTATTCCGTGTGTATGATGTCGACGCAAAATATCACAATGTAAATGTGAAGACACTGGATTTGAAGAATCAAGAATTTCTAGGGGAAGGCACTTGTGCGCTTTCGGAGATAGTGACTAAACGAAGTCGAAGTCTTACCCTAAATCTCAATGATGACTCTGGACGTCTTGGAGGCCGGAGAAACTTAGGAACTCTCACTGTACATGCTGAGGAATTTAGTGCTTCTAAGAGTGTTGTTGAGATAAAATTTCGTTGTTCCCGCTTGGAAAACAAAGACCTGTTTTCTAAAAGCGATCCTTTCTTAAGAATATCGAGGATGGTTGAGACCGGTGGTTGTGTTCCAATTTGCAAGACAGAAGTGGTGGACAACAATTTAAATCCAACTTGGAAATCACTGTGCCTGAGTATGCAGCAGATTGGAAGCAAGGATAATCCCTTAGTTATTGAATGCTTTGATTTCAACAGCAATGGCGAACATGTTCTTATTGGAAAACTCCAAAAGTCGGTGGCAGACCTCGAGAAACTCTACAAAGAGAAAAGCTGCATCAACTTTGTCATTCCGCCATCTTCTCGTCATAGTCATGAAAAGCTCTCCAAGGGTCTGCTTTTTGTGGATCATTTTTGCGAGAAGGAACAACCAAGCTTTATTGATTACATATCTAGTGGTTTTGAGCTCAACTTTATGGTTGCCGTTGATTTTACAGCTTCAAATCTAGATCCTAGCCGAACCGATTCTTTGCACTATATTGATCCTTCTGGCCGGTTGAATTCTTACCAGCAGGCAATAATGCAAGTAGGGGAAGTCATTCAATTTTACGACACTGATAAACGCTTTCCTGCTTGGGGATTTGGAGCACGGATATATGGTGGTGACCGTGGTGCCGTTACTGCCGTATCCCATTGTTTCAACATGGATGAAACCCCAACTGGCTTTGAGGTTCAAGGAGTTGAAGGCATCATGTCTGCTTATTCCAGTGCTCTACGCAAGGTTTCTCTATTTGGACCGACTTTGTTTGGCAAAGTGGTTAACAGGGCTGCAGAAATGGCTTCACAATCCCTCTCGGAACACAACAACAAGTACTTTGTGTTACTTATTATTACAGACGGTATCCTTTCGGACCTTCAAGAAACAATAGATGCTTTGGTTAGGGCATCTGATCTTCCCCTCTCCATTATGATAGTTGGAGTCGGAAATGCAGATTTCAAACAAATGGAGATCCTTGATGCTGACAATGGACATCCATTGCGGAGTTCGACAGGTTGTTTAGCTGCAAGAGACATTGTTCAGTTTGTTCCCATGAGGGAAATGAATGGTCAGCGGATTTCTGTTGTTCAATCGCTTCTGGAGGAGCTGCCTGGACAGTTTTTGAGTTACATGCGGAACAAGGGCATCAAGCCACTCTCACCTTTCCATTCCAAGCCCCATGCCTTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BAH RRM_1

Protein Analysis

592

Amino Acids

65.83

Weight (kDa)

5.69

Isoelectric Point (pI)

35.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	54 - 159	2.9e-12	C2 domain
C2	PF00168	199 - 289	1.7e-12	C2 domain
Copine	PF07002	360 - 581	4.8e-77	Copine

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002843)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G15605 AT3G15605 AT3G15605 AT3G15605
fragaria_vesca	FvH4_6g30540 FvH4_6g30540 FvH4_6g30540 FvH4_6g30540 FvH4_6g30540 FvH4_6g30540 FvH4_6g30540 FvH4_6g30540 FvH4_6g30540 FvH4_6g30540
malus_domestica	MD09G1219000.v1.1
prunus_persica	Prupe.3G077800_v2.0.a1 Prupe.3G077800_v2.0.a1 Prupe.3G077800_v2.0.a1 Prupe.3G077800_v2.0.a1 Prupe.3G077800_v2.0.a1
pyrus_communis	pycom09g13690
rosa_chinensis	RchiOBHm_Chr2g0136961
rosa_laevigata	RLG00000019591
rosa_multiflora	Rmu_co8420089.1_g000001 Rmu_sc0001374.1_g000069
rosa_roxburghii	Rroxscaffold_2G00107840 Rroxscaffold_2G00107850
rosa_rugosa	Rorug02G0335700 Rorug02G0335800 Rorug02G0335900 Rorug02G0336000 Rorug02G0336100 Rorug02G0336200
rosa_samantha	Rh2AG385600 Rh2BG392600 Rh2CG372800 Rh2DG408700
rosa_wichuraiana	Rw2G031540 Rw2G031550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	24, 511
AccB1I	GGYRCC	1 cut(s)	1223
AccI	GTMKAC	2 cut(s)	99, 366
AciI	CCGC	6 cut(s)	162, 604, 905, 1591, 1663, 1723
AclWI	GGATC	6 cut(s)	197, 632, 966, 1055, 1088, 1555
AcoI	YGGCCR	1 cut(s)	1102
AcsI	RAATTY	4 cut(s)	419, 557, 590, 1111
AcuI	CTGAAG	1 cut(s)	285
AcyI	GRCGYC	3 cut(s)	21, 93, 508
AfaI	GTAC	4 cut(s)	273, 336, 546, 1424
AfiI	CCNNNNNNNGG	2 cut(s)	847, 1187
AflII	CTTAAG	1 cut(s)	646
AflIII	ACRYGT	1 cut(s)	820
AgeI	ACCGGT	1 cut(s)	671
AjnI	CCWGG	1 cut(s)	1699
Alw21I	GWGCWC	3 cut(s)	1020, 1201, 1324
Alw26I	GTCTC	3 cut(s)	120, 662, 1614
AlwI	GGATC	6 cut(s)	197, 632, 966, 1055, 1088, 1555
Ama87I	CYCGRG	2 cut(s)	146, 860
AoxI	GGCC	3 cut(s)	62, 517, 1102
ApeKI	GCWGC	6 cut(s)	314, 754, 885, 1379, 1613, 1696
ApoI	RAATTY	4 cut(s)	419, 557, 590, 1111
ArsI	GACNNNNNNTTYG	4 cut(s)	388, 420, 460, 492
AsiGI	ACCGGT	1 cut(s)	671
Asp700I	GAANNNNTTC	3 cut(s)	822, 1075, 1149
AspLEI	GCGC	2 cut(s)	55, 445
AspS9I	GGNCC	2 cut(s)	1346, 1462
AsuHPI	GGTGA	2 cut(s)	1226, 1740
AsuII	TTCGAA	1 cut(s)	194
AvaI	CYCGRG	2 cut(s)	146, 860
AvaII	GGWCC	2 cut(s)	1346, 1462
BaeI	ACNNNNGTAYC	2 cut(s)	1221, 1254
BanI	GGYRCC	1 cut(s)	1223
BanII	GRGCYC	1 cut(s)	1020
BauI	CACGAG	1 cut(s)	245
BbsI	GAAGAC	1 cut(s)	401
Bbv12I	GWGCWC	3 cut(s)	1020, 1201, 1324
BbvCI	CCTCAGC	1 cut(s)	552
BbvI	GCAGC	6 cut(s)	301, 766, 872, 1366, 1600, 1683
BccI	CCATC	2 cut(s)	655, 916
BceAI	ACGGC	5 cut(s)	80, 325, 1019, 1211, 1220
BciT130I	CCWGG	1 cut(s)	1701
BciVI	GTATCC	2 cut(s)	1249, 1463
BcoDI	GTCTC	3 cut(s)	120, 662, 1614
BfaI	CTAG	5 cut(s)	425, 1005, 1058, 1065, 1777
BfmI	CTRYAG	1 cut(s)	1380
BfrI	CTTAAG	1 cut(s)	646
BfuI	GTATCC	2 cut(s)	1249, 1463
BisI	GCNGC	6 cut(s)	315, 755, 886, 1380, 1614, 1697
BlsI	GCNGC	6 cut(s)	316, 756, 887, 1381, 1615, 1698
BmcAI	AGTACT	2 cut(s)	273, 1424
Bme1390I	CCNGG	1 cut(s)	1701
Bme18I	GGWCC	2 cut(s)	1346, 1462
BmeT110I	CYCGRG	2 cut(s)	146, 860
BmgT120I	GGNCC	2 cut(s)	1346, 1462
BmiI	GGNNCC	1 cut(s)	1225
BmrFI	CCNGG	1 cut(s)	1701
BmsI	GCATC	6 cut(s)	897, 1308, 1471, 1505, 1558, 1743
BpiI	GAAGAC	1 cut(s)	401
BpmI	CTGGAG	1 cut(s)	1709
Bpu10I	CCTNAGC	1 cut(s)	552
Bpu14I	TTCGAA	1 cut(s)	194
BsaHI	GRCGYC	3 cut(s)	21, 93, 508
BsaI	GGTCTC	1 cut(s)	662
BsaJI	CCNNGG	3 cut(s)	207, 939, 1219
BsaWI	WCCGGW	1 cut(s)	671
Bsc4I	CCNNNNNNNGG	2 cut(s)	847, 1187
Bse118I	RCCGGY	2 cut(s)	671, 1104
Bse1I	ACTGG	3 cut(s)	405, 1276, 1317
Bse3DI	GCAATG	2 cut(s)	817, 1586
BseBI	CCWGG	1 cut(s)	1701
BseDI	CCNNGG	3 cut(s)	207, 939, 1219
BseGI	GGATG	3 cut(s)	666, 1264, 1582
BseLI	CCNNNNNNNGG	2 cut(s)	847, 1187
BseMI	GCAATG	2 cut(s)	817, 1586
BseMII	CTCAG	3 cut(s)	131, 543, 737
BseNI	ACTGG	3 cut(s)	405, 1276, 1317
BseRI	GAGGAG	2 cut(s)	42, 1706
BseXI	GCAGC	6 cut(s)	301, 766, 872, 1366, 1600, 1683
BshFI	GGCC	3 cut(s)	64, 519, 1104
BshNI	GGYRCC	1 cut(s)	1223
BshTI	ACCGGT	1 cut(s)	671
BsiHKAI	GWGCWC	3 cut(s)	1020, 1201, 1324
BsiHKCI	CYCGRG	2 cut(s)	146, 860
BsiSI	CCGG	3 cut(s)	520, 672, 1105
BslFI	GGGAC	1 cut(s)	113
BslI	CCNNNNNNNGG	2 cut(s)	847, 1187
BsmAI	GTCTC	3 cut(s)	120, 662, 1614
BsmFI	GGGAC	1 cut(s)	113
BsmI	GAATGC	1 cut(s)	797
BsnI	GGCC	3 cut(s)	64, 519, 1104
Bso31I	GGTCTC	1 cut(s)	662
BsoBI	CYCGRG	2 cut(s)	146, 860
Bsp119I	TTCGAA	1 cut(s)	194
Bsp1286I	GDGCHC	3 cut(s)	1020, 1201, 1324
Bsp1407I	TGTACA	2 cut(s)	334, 544
Bsp143I	GATC	9 cut(s)	178, 202, 241, 637, 958, 1060, 1093, 1501, 1560
Bsp19I	CCATGG	1 cut(s)	207
BspACI	CCGC	6 cut(s)	162, 604, 905, 1591, 1663, 1723
BspANI	GGCC	3 cut(s)	64, 519, 1104
BspCNI	CTCAG	3 cut(s)	130, 544, 738
BspHI	TCATGA	1 cut(s)	925
BspLI	GGNNCC	1 cut(s)	1225
BspMAI	CTGCAG	1 cut(s)	1384
BspPI	GGATC	6 cut(s)	197, 632, 966, 1055, 1088, 1555
BspT104I	TTCGAA	1 cut(s)	194
BspT107I	GGYRCC	1 cut(s)	1223
BspTI	CTTAAG	1 cut(s)	646
BspTNI	GGTCTC	1 cut(s)	662
BsrDI	GCAATG	2 cut(s)	817, 1586
BsrFI	RCCGGY	2 cut(s)	671, 1104
BsrGI	TGTACA	2 cut(s)	334, 544
BsrI	ACTGG	3 cut(s)	405, 1276, 1317
BssAI	RCCGGY	2 cut(s)	671, 1104
BssECI	CCNNGG	3 cut(s)	207, 939, 1219
BssMI	GATC	9 cut(s)	178, 202, 241, 637, 958, 1060, 1093, 1501, 1560
BssNI	GRCGYC	3 cut(s)	21, 93, 508
BssSI	CACGAG	1 cut(s)	245
BssT1I	CCWWGG	2 cut(s)	207, 939
Bst2BI	CACGAG	1 cut(s)	245
Bst2UI	CCWGG	1 cut(s)	1701
Bst4CI	ACNGT	5 cut(s)	544, 741, 1220, 1451, 1707
Bst6I	CTCTTC	1 cut(s)	191
BstACI	GRCGYC	3 cut(s)	21, 93, 508
BstAFI	CTTAAG	1 cut(s)	646
BstAUI	TGTACA	2 cut(s)	334, 544
BstBI	TTCGAA	1 cut(s)	194
BstC8I	GCNNGC	2 cut(s)	39, 1125
BstDEI	CTNAG	6 cut(s)	117, 529, 552, 570, 746, 781
BstDSI	CCRYGG	2 cut(s)	207, 1219
BstEII	GGTNACC	1 cut(s)	1214
BstF5I	GGATG	3 cut(s)	666, 1264, 1582
BstHHI	GCGC	2 cut(s)	55, 445
BstKTI	GATC	9 cut(s)	181, 205, 244, 640, 961, 1063, 1096, 1504, 1563
BstMAI	GTCTC	3 cut(s)	120, 662, 1614
BstMBI	GATC	9 cut(s)	178, 202, 241, 637, 958, 1060, 1093, 1501, 1560
BstMWI	GCNNNNNNNGC	3 cut(s)	61, 1232, 1388
BstNI	CCWGG	1 cut(s)	1701
BstNSI	RCATGY	3 cut(s)	551, 824, 1723
BstPI	GGTNACC	1 cut(s)	1214
BstSCI	CCNGG	1 cut(s)	1699
BstSFI	CTRYAG	1 cut(s)	1380
BstV1I	GCAGC	6 cut(s)	301, 766, 872, 1366, 1600, 1683
BstV2I	GAAGAC	1 cut(s)	401
BstX2I	RGATCY	2 cut(s)	1060, 1560
BstYI	RGATCY	2 cut(s)	1060, 1560
BsuI	GTATCC	2 cut(s)	1249, 1463
BsuRI	GGCC	3 cut(s)	64, 519, 1104
BtgI	CCRYGG	2 cut(s)	207, 1219
BtsCI	GGATG	3 cut(s)	666, 1264, 1582
BtsIMutI	CAGTG	5 cut(s)	398, 540, 737, 1164, 1324
Cac8I	GCNNGC	2 cut(s)	39, 1125
CciI	TCATGA	1 cut(s)	925
CfoI	GCGC	2 cut(s)	55, 445
Cfr10I	RCCGGY	2 cut(s)	671, 1104
Cfr13I	GGNCC	2 cut(s)	1346, 1462
CseI	GACGC	2 cut(s)	101, 377
Csp6I	GTAC	4 cut(s)	272, 335, 545, 1423
CspAI	ACCGGT	1 cut(s)	671
CviAII	CATG	9 cut(s)	208, 548, 821, 926, 1255, 1303, 1642, 1720, 1769
CviQI	GTAC	4 cut(s)	272, 335, 545, 1423
DdeI	CTNAG	6 cut(s)	117, 529, 552, 570, 746, 781
DpnI	GATC	9 cut(s)	180, 204, 243, 639, 960, 1062, 1095, 1503, 1562
DpnII	GATC	9 cut(s)	178, 202, 241, 637, 958, 1060, 1093, 1501, 1560
DraI	TTTAAA	1 cut(s)	720
EaeI	YGGCCR	1 cut(s)	1102
Eam1104I	CTCTTC	1 cut(s)	191
EarI	CTCTTC	1 cut(s)	191
EciI	GGCGGA	2 cut(s)	151, 894
Ecl136II	GAGCTC	1 cut(s)	1018
Eco130I	CCWWGG	2 cut(s)	207, 939
Eco24I	GRGCYC	1 cut(s)	1020
Eco31I	GGTCTC	1 cut(s)	662
Eco47I	GGWCC	2 cut(s)	1346, 1462
Eco53kI	GAGCTC	1 cut(s)	1018
Eco57I	CTGAAG	1 cut(s)	285
Eco88I	CYCGRG	2 cut(s)	146, 860
Eco91I	GGTNACC	1 cut(s)	1214
EcoICRI	GAGCTC	1 cut(s)	1018
EcoO65I	GGTNACC	1 cut(s)	1214
EcoRI	GAATTC	1 cut(s)	1111
EcoRII	CCWGG	1 cut(s)	1699
EcoT14I	CCWWGG	2 cut(s)	207, 939
EcoT38I	GRGCYC	1 cut(s)	1020
ErhI	CCWWGG	2 cut(s)	207, 939
FaeI	CATG	9 cut(s)	211, 551, 824, 929, 1258, 1306, 1645, 1723, 1772
FalI	AAGNNNNNCTT	2 cut(s)	625, 657
FaqI	GGGAC	1 cut(s)	113
FatI	CATG	9 cut(s)	207, 547, 820, 925, 1254, 1302, 1641, 1719, 1768
FauI	CCCGC	1 cut(s)	611
FblI	GTMKAC	2 cut(s)	99, 366
Fnu4HI	GCNGC	6 cut(s)	315, 755, 886, 1380, 1614, 1697
FokI	GGATG	3 cut(s)	673, 1271, 1569
FriOI	GRGCYC	1 cut(s)	1020
Fsp4HI	GCNGC	6 cut(s)	315, 755, 886, 1380, 1614, 1697
FspBI	CTAG	5 cut(s)	425, 1005, 1058, 1065, 1777
GlaI	GCGC	2 cut(s)	54, 444
GluI	GCNGC	6 cut(s)	315, 755, 886, 1380, 1614, 1697
GsuI	CTGGAG	1 cut(s)	1709
HaeIII	GGCC	3 cut(s)	64, 519, 1104
HapII	CCGG	3 cut(s)	520, 672, 1105
HgaI	GACGC	2 cut(s)	101, 377
HhaI	GCGC	2 cut(s)	55, 445
Hin1I	GRCGYC	3 cut(s)	21, 93, 508
Hin1II	CATG	9 cut(s)	211, 551, 824, 929, 1258, 1306, 1645, 1723, 1772
Hin6I	GCGC	2 cut(s)	53, 443
HinP1I	GCGC	2 cut(s)	53, 443
HincII	GTYRAC	3 cut(s)	100, 367, 1372
HindII	GTYRAC	3 cut(s)	100, 367, 1372
HindIII	AAGCTT	1 cut(s)	985
HinfI	GANTC	5 cut(s)	286, 412, 500, 1076, 1530
HpaI	GTTAAC	1 cut(s)	1372
HpaII	CCGG	3 cut(s)	520, 672, 1105
HphI	GGTGA	2 cut(s)	1226, 1740
Hpy166II	GTNNAC	4 cut(s)	100, 367, 709, 1372
Hpy188I	TCNGA	8 cut(s)	19, 26, 285, 451, 1408, 1462, 1501, 1535
Hpy188III	TCNNGA	9 cut(s)	182, 245, 416, 504, 862, 926, 1058, 1469, 1688
Hpy8I	GTNNAC	4 cut(s)	100, 367, 709, 1372
Hpy99I	CGWCG	3 cut(s)	95, 101, 371
HpyAV	CCTTC	6 cut(s)	166, 425, 967, 1107, 1289, 1475
HpyCH4III	ACNGT	5 cut(s)	544, 741, 1220, 1451, 1707
HpyCH4IV	ACGT	2 cut(s)	21, 508
HpyF10VI	GCNNNNNNNGC	3 cut(s)	61, 1232, 1388
HpyF3I	CTNAG	6 cut(s)	117, 529, 552, 570, 746, 781
HpySE526I	ACGT	2 cut(s)	21, 508
Hsp92I	GRCGYC	3 cut(s)	21, 93, 508
Hsp92II	CATG	9 cut(s)	211, 551, 824, 929, 1258, 1306, 1645, 1723, 1772
HspAI	GCGC	2 cut(s)	53, 443
KspAI	GTTAAC	1 cut(s)	1372
Kzo9I	GATC	9 cut(s)	178, 202, 241, 637, 958, 1060, 1093, 1501, 1560
LmnI	GCTCC	4 cut(s)	50, 122, 1196, 1693
Lsp1109I	GCAGC	6 cut(s)	301, 766, 872, 1366, 1600, 1683
LweI	GCATC	6 cut(s)	897, 1308, 1471, 1505, 1558, 1743
MaeI	CTAG	5 cut(s)	425, 1005, 1058, 1065, 1777
MaeII	ACGT	2 cut(s)	21, 508
MaeIII	GTNAC	5 cut(s)	457, 1214, 1228, 1431, 1715
MalI	GATC	9 cut(s)	180, 204, 243, 639, 960, 1062, 1095, 1503, 1562
MboI	GATC	9 cut(s)	178, 202, 241, 637, 958, 1060, 1093, 1501, 1560
MboII	GAAGA	5 cut(s)	208, 406, 421, 903, 1496
MflI	RGATCY	2 cut(s)	1060, 1560
MhlI	GDGCHC	3 cut(s)	1020, 1201, 1324
MluCI	AATT	9 cut(s)	66, 251, 419, 557, 590, 687, 715, 1111, 1154
MlyI	GAGTC	2 cut(s)	494, 1539
MmeI	TCCRAC	3 cut(s)	749, 1507, 1513
MroXI	GAANNNNTTC	3 cut(s)	822, 1075, 1149
MseI	TTAA	5 cut(s)	69, 108, 647, 719, 1371
MslI	CAYNNNNRTG	1 cut(s)	924
MspA1I	CMGCKG	1 cut(s)	1663
MspCI	CTTAAG	1 cut(s)	646
MspI	CCGG	3 cut(s)	520, 672, 1105
MspR9I	CCNGG	1 cut(s)	1701
Mva1269I	GAATGC	1 cut(s)	797
MvaI	CCWGG	1 cut(s)	1701
MwoI	GCNNNNNNNGC	3 cut(s)	61, 1232, 1388
NcoI	CCATGG	1 cut(s)	207
NdeII	GATC	9 cut(s)	178, 202, 241, 637, 958, 1060, 1093, 1501, 1560
NlaIII	CATG	9 cut(s)	211, 551, 824, 929, 1258, 1306, 1645, 1723, 1772
NlaIV	GGNNCC	1 cut(s)	1225
NmuCI	GTSAC	2 cut(s)	457, 1214
NspI	RCATGY	3 cut(s)	551, 824, 1723
NspV	TTCGAA	1 cut(s)	194
PaeR7I	CTCGAG	2 cut(s)	146, 860
PagI	TCATGA	1 cut(s)	925
PciI	ACATGT	1 cut(s)	820
PcsI	WCGNNNNNNNCGW	1 cut(s)	96
PctI	GAATGC	1 cut(s)	797
PdmI	GAANNNNTTC	3 cut(s)	822, 1075, 1149
PfeI	GAWTC	3 cut(s)	286, 412, 1076
PflFI	GACNNNGTC	1 cut(s)	95
PinAI	ACCGGT	1 cut(s)	671
PkrI	GCNGC	6 cut(s)	316, 756, 887, 1381, 1615, 1698
PleI	GAGTC	2 cut(s)	494, 1538
PpsI	GAGTC	2 cut(s)	494, 1538
PscI	ACATGT	1 cut(s)	820
Psp124BI	GAGCTC	1 cut(s)	1020
Psp6I	CCWGG	1 cut(s)	1699
PspEI	GGTNACC	1 cut(s)	1214
PspGI	CCWGG	1 cut(s)	1699
PspN4I	GGNNCC	1 cut(s)	1225
PspPI	GGNCC	2 cut(s)	1346, 1462
PspXI	VCTCGAGB	1 cut(s)	146
PstI	CTGCAG	1 cut(s)	1384
PsuI	RGATCY	2 cut(s)	1060, 1560
PsyI	GACNNNGTC	1 cut(s)	95
RsaI	GTAC	4 cut(s)	273, 336, 546, 1424
RsaNI	GTAC	4 cut(s)	272, 335, 545, 1423
RseI	CAYNNNNRTG	1 cut(s)	924
SacI	GAGCTC	1 cut(s)	1020
SalI	GTCGAC	2 cut(s)	98, 365
SaqAI	TTAA	5 cut(s)	69, 108, 647, 719, 1371
SatI	GCNGC	6 cut(s)	315, 755, 886, 1380, 1614, 1697
Sau3AI	GATC	9 cut(s)	178, 202, 241, 637, 958, 1060, 1093, 1501, 1560
Sau96I	GGNCC	2 cut(s)	1346, 1462
ScaI	AGTACT	2 cut(s)	273, 1424
SchI	GAGTC	2 cut(s)	494, 1539
ScrFI	CCNGG	1 cut(s)	1701
SduI	GDGCHC	3 cut(s)	1020, 1201, 1324
SfaNI	GCATC	6 cut(s)	897, 1308, 1471, 1505, 1558, 1743
SfcI	CTRYAG	1 cut(s)	1380
Sfr274I	CTCGAG	2 cut(s)	146, 860
SfuI	TTCGAA	1 cut(s)	194
SinI	GGWCC	2 cut(s)	1346, 1462
SlaI	CTCGAG	2 cut(s)	146, 860
SmiI	ATTTAAAT	1 cut(s)	720
SmiMI	CAYNNNNRTG	1 cut(s)	924
SmlI	CTYRAG	3 cut(s)	146, 646, 860
SmoI	CTYRAG	3 cut(s)	146, 646, 860
Sse9I	AATT	9 cut(s)	66, 251, 419, 557, 590, 687, 715, 1111, 1154
SsiI	CCGC	6 cut(s)	162, 604, 905, 1591, 1663, 1723
SspMI	CTAG	5 cut(s)	425, 1005, 1058, 1065, 1777
SstI	GAGCTC	1 cut(s)	1020
StyD4I	CCNGG	1 cut(s)	1699
StyI	CCWWGG	2 cut(s)	207, 939
SwaI	ATTTAAAT	1 cut(s)	720
TaaI	ACNGT	5 cut(s)	544, 741, 1220, 1451, 1707
TaiI	ACGT	2 cut(s)	24, 511
TaqI	TCGA	9 cut(s)	99, 147, 194, 327, 366, 472, 656, 861, 1598
TaqII	GACCGA	1 cut(s)	1363
TasI	AATT	9 cut(s)	66, 251, 419, 557, 590, 687, 715, 1111, 1154
TatI	WGTACW	4 cut(s)	271, 334, 544, 1422
TfiI	GAWTC	3 cut(s)	286, 412, 1076
Tru1I	TTAA	5 cut(s)	69, 108, 647, 719, 1371
Tru9I	TTAA	5 cut(s)	69, 108, 647, 719, 1371
TscAI	CASTG	5 cut(s)	405, 547, 744, 1171, 1324
TseFI	GTSAC	2 cut(s)	457, 1214
TseI	GCWGC	6 cut(s)	314, 754, 885, 1379, 1613, 1696
Tsp45I	GTSAC	2 cut(s)	457, 1214
TspDTI	ATGAA	3 cut(s)	942, 1275, 1667
TspGWI	ACGGA	2 cut(s)	341, 1216
TspRI	CASTG	5 cut(s)	405, 547, 744, 1171, 1324
Tth111I	GACNNNGTC	1 cut(s)	95
Vha464I	CTTAAG	1 cut(s)	646
VpaK11BI	GGWCC	2 cut(s)	1346, 1462
XapI	RAATTY	4 cut(s)	419, 557, 590, 1111
XbaI	TCTAGA	1 cut(s)	1057
XceI	RCATGY	3 cut(s)	551, 824, 1723
XhoI	CTCGAG	2 cut(s)	146, 860
XmiI	GTMKAC	2 cut(s)	99, 366
XmnI	GAANNNNTTC	3 cut(s)	822, 1075, 1149
XspI	CTAG	5 cut(s)	425, 1005, 1058, 1065, 1777
ZraI	GACGTC	2 cut(s)	22, 509
ZrmI	AGTACT	2 cut(s)	273, 1424

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.