Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000157.1

Orthogroup ID

OG0003223

Physical Location & Seq

Genomic Coordinates Reverse (-)

11248 .. 16399

Gene Structure 5152 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1743 bp

atggccgactacgaaggaaggtacgacggtaacggagaggacgctgacggctcctctccccaaccgcggagcactaaccatggcggtctcgacgattacagcgattccaaatctcagcattcccgtgattatgagagagaatcttcaaagagtagagaaaaggggcgtgataaggagagggacagggacagagatcgggagagagacagggatagggacagggacagggacagagggagaagcaaggataaagatagagagagggacagagacaggggtagggatagggaacgagaaagggacagagacagggatcatgatcgtcatcatagagaccgccacagggatcgtgaaaggagtgagcgaaggagagataaggatgatgatgatgatgaggatcactaccgtagtcgcgaccgtgataggcggagggattatgacagagacagggaggataggcataggcgcaggtctcgttccaggggtaggtctgagcataaatccagatcaaggtcgcgttcacgctcacgttccaaaagcaaaagaattagcggttttgacatggcacctcctgcttctgcactattacctggtgctgctgttcctgtgacaggccagattcctggagctactccaaccattcctgggatgttcccaaacatgtttcctttggcgactggccagcagtttggagcacttccagttatgcctgtgcaagcaatgactcaacaggctactaggaatgcccggagggtgtatgttggagggcttccccctacagcaaatgaacagtcggttgctacatttttcagccatgtaatgcatgctattggagggaacactgctggcccaggagatgctgttgttaatgtttacatcaaccatgaaaaaaaatttgcctttgtggagatgagatctgtggaagaggccagcaatgcaatggctttggatgggattattttcgagggtgcccctgttaaggttaggagacctagtgactacaacccatctcttgctgcaacacttggtccaagccagcccagtccaaatctgaacttggctaatgtcggcctgacaccaggttctgctggtggccttgagggacctgatcgcatttttgttggtggtctaccctattactttacagaagtacagatcaaggagttgctcgagtcttttggacccctccgtggttttgatctagtgaaagatagggaaacaggaaactcgaaaggatatgccttttgtgtttaccaagatctttcagttaccgacatagcctgtgcagcactgaatgggattaaaatgggagacaagaccctcacggtcaggcgtgctaatcaaggtgccaaccagccaaaacctgagcaagagagtgttttgttgcatgcacagcagcaaattgcattgcagaggttcctgttgttgcaacagcctgcttcggtggccaccaaagttgtatgcttaacacaagtagttacagaggatgagctgaaggatgatcttgagtatgaagacatagtggaagatatgaagcaagagggcgagaaatttggttcacttgtgagcgtcatcattccacgtccacgaccagatggtcaaccttcatgctctcgacttgtgactatattgttgactagagttaattgtcaatttcaggaggagatggggcagatgcagacaacgattcaactaccttttgtaactttaagtatgctaaagaacaacttgagtaattcatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000243 GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0003727 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0008187 GO:0008380 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016604 GO:0016607 GO:0030628 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0036002 GO:0042742 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0050896 GO:0051704 GO:0051707 GO:0070013 GO:0071004 GO:0071010 GO:0071704 GO:0089701 GO:0090304 GO:0097159 GO:0098542 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

RRM_1

Protein Analysis

580

Amino Acids

65.58

Weight (kDa)

8.43

Isoelectric Point (pI)

55.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	372 - 441	5.9e-17	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003223)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G60900 AT4G36690 AT4G36690 AT4G36690 AT4G36690
fragaria_vesca	FvH4_1g13680 FvH4_1g13680 FvH4_1g13680 FvH4_1g13680 FvH4_1g13680 FvH4_1g13680 FvH4_1g13680 FvH4_1g18180
malus_domestica	MD02G1151300.v1.1 MD15G1265800.v1.1
prunus_persica	Prupe.7G151700_v2.0.a1 Prupe.7G151700_v2.0.a1 Prupe.7G151700_v2.0.a1
pyrus_communis	pycom15g23150
rosa_chinensis	RchiOBHm_Chr2g0102011 RchiOBHm_Chr7g0198161
rosa_laevigata	RLG00000017126
rosa_multiflora	Rmu_co8319619.1_g000001 Rmu_sc0000157.1_g000005 Rmu_sc0001167.1_g000028
rosa_roxburghii	Rroxscaffold_2G00140830
rosa_rugosa	Rorug02G0103800 Rorug02G0103900 Rorug02G0104000
rosa_samantha	Rh2AG152000 Rh2BG157400 Rh2CG157400 Rh2DG157500
rosa_wichuraiana	Rw0G008320 Rw2G011870 Rw4G020950 Rw5G047310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1596
Acc36I	ACCTGC	1 cut(s)	459
AccB1I	GGYRCC	3 cut(s)	565, 968, 1346
AccI	GTMKAC	1 cut(s)	1129
AccII	CGCG	3 cut(s)	67, 414, 517
AciI	CCGC	6 cut(s)	65, 67, 84, 337, 427, 552
AclWI	GGATC	3 cut(s)	321, 354, 405
AcoI	YGGCCR	3 cut(s)	3, 679, 1446
AcsI	RAATTY	2 cut(s)	893, 1550
AcuI	CTGAAG	1 cut(s)	1514
AfaI	GTAC	2 cut(s)	23, 1152
AfiI	CCNNNNNNNGG	8 cut(s)	66, 343, 486, 510, 611, 645, 979, 1190
AflIII	ACRYGT	1 cut(s)	660
AgsI	TTSAA	2 cut(s)	147, 1691
AjiI	CACGTC	1 cut(s)	1583
AjnI	CCWGG	6 cut(s)	479, 589, 622, 643, 850, 1078
AluBI	AGCT	2 cut(s)	629, 1492
AluI	AGCT	2 cut(s)	629, 1492
Alw21I	GWGCWC	2 cut(s)	74, 697
Alw26I	GTCTC	9 cut(s)	92, 198, 264, 300, 327, 438, 477, 982, 1305
AlwI	GGATC	3 cut(s)	321, 354, 405
AlwNI	CAGNNNCTG	1 cut(s)	1085
Ama87I	CYCGRG	1 cut(s)	1169
AoxI	GGCC	8 cut(s)	3, 613, 679, 847, 927, 1069, 1093, 1446
ApeKI	GCWGC	4 cut(s)	596, 1016, 1286, 1396
ApoI	RAATTY	2 cut(s)	893, 1550
ArsI	GACNNNNNNTTYG	2 cut(s)	776, 808
AspLEI	GCGC	1 cut(s)	468
AspS9I	GGNCC	4 cut(s)	848, 1028, 1103, 1181
AsuC2I	CCSGG	1 cut(s)	748
AvaI	CYCGRG	1 cut(s)	1169
AvaII	GGWCC	3 cut(s)	1028, 1103, 1181
BaeGI	GKGCMC	1 cut(s)	973
BaeI	ACNNNNGTAYC	2 cut(s)	13, 46
BalI	TGGCCA	2 cut(s)	681, 1448
BanI	GGYRCC	3 cut(s)	565, 968, 1346
BbsI	GAAGAC	1 cut(s)	1521
Bbv12I	GWGCWC	2 cut(s)	74, 697
BbvI	GCAGC	4 cut(s)	583, 1003, 1298, 1408
BccI	CCATC	4 cut(s)	944, 1015, 1589, 1660
BceAI	ACGGC	1 cut(s)	64
BciT130I	CCWGG	6 cut(s)	481, 591, 624, 645, 852, 1080
BcnI	CCSGG	1 cut(s)	748
BcoDI	GTCTC	9 cut(s)	92, 198, 264, 300, 327, 438, 477, 982, 1305
BfaI	CTAG	4 cut(s)	738, 993, 1202, 1638
BfmI	CTRYAG	1 cut(s)	777
BfuAI	ACCTGC	1 cut(s)	459
BglII	AGATCT	2 cut(s)	914, 1258
BisI	GCNGC	4 cut(s)	597, 1017, 1287, 1397
BlsI	GCNGC	4 cut(s)	598, 1018, 1288, 1398
Bme1390I	CCNGG	7 cut(s)	481, 591, 624, 645, 748, 852, 1080
Bme18I	GGWCC	3 cut(s)	1028, 1103, 1181
BmeT110I	CYCGRG	1 cut(s)	1169
BmgBI	CACGTC	1 cut(s)	1583
BmgT120I	GGNCC	4 cut(s)	848, 1028, 1103, 1181
BmiI	GGNNCC	7 cut(s)	52, 567, 970, 1104, 1183, 1348, 1418
BmrFI	CCNGG	7 cut(s)	481, 591, 624, 645, 748, 852, 1080
BmrI	ACTGGG	1 cut(s)	1035
BmsI	GCATC	2 cut(s)	847, 1665
BmuI	ACTGGG	1 cut(s)	1035
BpiI	GAAGAC	1 cut(s)	1521
BpmI	CTGGAG	1 cut(s)	645
Bpu10I	CCTNAGC	1 cut(s)	1365
BpuEI	CTTGAG	2 cut(s)	1118, 1526
BpuMI	CCSGG	1 cut(s)	748
BsaBI	GATNNNNATC	3 cut(s)	318, 324, 396
BsaI	GGTCTC	4 cut(s)	92, 327, 477, 982
BsaJI	CCNNGG	6 cut(s)	65, 79, 480, 644, 850, 1189
BsaXI	ACNNNNNCTCC	4 cut(s)	846, 876, 979, 1009
Bsc4I	CCNNNNNNNGG	8 cut(s)	66, 343, 486, 510, 611, 645, 979, 1190
Bse1I	ACTGG	3 cut(s)	682, 701, 1041
Bse3DI	GCAATG	4 cut(s)	726, 940, 945, 1406
Bse8I	GATNNNNATC	3 cut(s)	318, 324, 396
BseBI	CCWGG	6 cut(s)	481, 591, 624, 645, 852, 1080
BseDI	CCNNGG	6 cut(s)	65, 79, 480, 644, 850, 1189
BseGI	GGATG	5 cut(s)	385, 654, 955, 1492, 1504
BseJI	GATNNNNATC	3 cut(s)	318, 324, 396
BseLI	CCNNNNNNNGG	8 cut(s)	66, 343, 486, 510, 611, 645, 979, 1190
BseMI	GCAATG	4 cut(s)	726, 940, 945, 1406
BseMII	CTCAG	3 cut(s)	128, 483, 1356
BseNI	ACTGG	3 cut(s)	682, 701, 1041
BseRI	GAGGAG	2 cut(s)	43, 1676
BseSI	GKGCMC	1 cut(s)	973
BseXI	GCAGC	4 cut(s)	583, 1003, 1298, 1408
BsgI	GTGCAG	2 cut(s)	564, 1305
Bsh1236I	CGCG	3 cut(s)	67, 414, 517
Bsh1285I	CGRYCG	1 cut(s)	418
BshFI	GGCC	8 cut(s)	5, 615, 681, 849, 929, 1071, 1095, 1448
BshNI	GGYRCC	3 cut(s)	565, 968, 1346
BsiEI	CGRYCG	1 cut(s)	418
BsiHKAI	GWGCWC	2 cut(s)	74, 697
BsiHKCI	CYCGRG	1 cut(s)	1169
BsiSI	CCGG	1 cut(s)	748
BslFI	GGGAC	8 cut(s)	194, 200, 230, 236, 242, 278, 314, 1116
BslI	CCNNNNNNNGG	8 cut(s)	66, 343, 486, 510, 611, 645, 979, 1190
BsmAI	GTCTC	9 cut(s)	92, 198, 264, 300, 327, 438, 477, 982, 1305
BsmFI	GGGAC	8 cut(s)	194, 200, 230, 236, 242, 278, 314, 1116
BsmI	GAATGC	2 cut(s)	118, 748
BsnI	GGCC	8 cut(s)	5, 615, 681, 849, 929, 1071, 1095, 1448
Bso31I	GGTCTC	4 cut(s)	92, 327, 477, 982
BsoBI	CYCGRG	1 cut(s)	1169
Bsp1286I	GDGCHC	3 cut(s)	74, 697, 973
Bsp19I	CCATGG	1 cut(s)	79
Bsp68I	TCGCGA	1 cut(s)	414
BspACI	CCGC	6 cut(s)	65, 67, 84, 337, 427, 552
BspANI	GGCC	8 cut(s)	5, 615, 681, 849, 929, 1071, 1095, 1448
BspCNI	CTCAG	3 cut(s)	127, 484, 1357
BspFNI	CGCG	3 cut(s)	67, 414, 517
BspHI	TCATGA	1 cut(s)	316
BspLI	GGNNCC	7 cut(s)	52, 567, 970, 1104, 1183, 1348, 1418
BspMI	ACCTGC	1 cut(s)	459
BspPI	GGATC	3 cut(s)	321, 354, 405
BspT107I	GGYRCC	3 cut(s)	565, 968, 1346
BspTNI	GGTCTC	4 cut(s)	92, 327, 477, 982
BsrDI	GCAATG	4 cut(s)	726, 940, 945, 1406
BsrI	ACTGG	3 cut(s)	682, 701, 1041
BssECI	CCNNGG	6 cut(s)	65, 79, 480, 644, 850, 1189
BssT1I	CCWWGG	1 cut(s)	79
Bst2UI	CCWGG	6 cut(s)	481, 591, 624, 645, 852, 1080
Bst4CI	ACNGT	5 cut(s)	29, 407, 419, 792, 1327
Bst6I	CTCTTC	1 cut(s)	918
BstAPI	GCANNNNNTGC	1 cut(s)	572
BstC8I	GCNNGC	9 cut(s)	683, 717, 825, 847, 931, 1037, 1335, 1389, 1437
BstDEI	CTNAG	3 cut(s)	114, 492, 1365
BstDSI	CCRYGG	3 cut(s)	65, 79, 1189
BstENI	CCTNNNNNAGG	1 cut(s)	609
BstF5I	GGATG	5 cut(s)	385, 654, 955, 1492, 1504
BstFNI	CGCG	3 cut(s)	67, 414, 517
BstHHI	GCGC	1 cut(s)	468
BstMAI	GTCTC	9 cut(s)	92, 198, 264, 300, 327, 438, 477, 982, 1305
BstMCI	CGRYCG	1 cut(s)	418
BstMWI	GCNNNNNNNGC	5 cut(s)	572, 935, 1286, 1393, 1445
BstNI	CCWGG	6 cut(s)	481, 591, 624, 645, 852, 1080
BstNSI	RCATGY	3 cut(s)	664, 827, 1391
BstSCI	CCNGG	7 cut(s)	479, 589, 622, 643, 746, 850, 1078
BstSFI	CTRYAG	1 cut(s)	777
BstSLI	GKGCMC	1 cut(s)	973
BstUI	CGCG	3 cut(s)	67, 414, 517
BstV1I	GCAGC	4 cut(s)	583, 1003, 1298, 1408
BstV2I	GAAGAC	1 cut(s)	1521
BstX2I	RGATCY	2 cut(s)	914, 1258
BstXI	CCANNNNNNTGG	2 cut(s)	623, 689
BstYI	RGATCY	2 cut(s)	914, 1258
BsuRI	GGCC	8 cut(s)	5, 615, 681, 849, 929, 1071, 1095, 1448
BtgI	CCRYGG	3 cut(s)	65, 79, 1189
BtrI	CACGTC	1 cut(s)	1583
BtsCI	GGATG	5 cut(s)	385, 654, 955, 1492, 1504
BtsI	GCAGTG	1 cut(s)	840
BtsIMutI	CAGTG	2 cut(s)	840, 1289
BtuMI	TCGCGA	1 cut(s)	414
BveI	ACCTGC	1 cut(s)	459
Cac8I	GCNNGC	9 cut(s)	683, 717, 825, 847, 931, 1037, 1335, 1389, 1437
CaiI	CAGNNNCTG	1 cut(s)	1085
CciI	TCATGA	1 cut(s)	316
CfoI	GCGC	1 cut(s)	468
Cfr13I	GGNCC	4 cut(s)	848, 1028, 1103, 1181
Cfr42I	CCGCGG	1 cut(s)	68
CseI	GACGC	2 cut(s)	50, 1558
CsiI	ACCWGGT	2 cut(s)	589, 1078
Csp6I	GTAC	2 cut(s)	22, 1151
CspCI	CAANNNNNGTGG	2 cut(s)	1438, 1473
CviAII	CATG	9 cut(s)	80, 317, 562, 661, 815, 824, 884, 1388, 1608
CviQI	GTAC	2 cut(s)	22, 1151
DdeI	CTNAG	3 cut(s)	114, 492, 1365
DrdI	GACNNNNNNGTC	1 cut(s)	1596
DseDI	GACNNNNNNGTC	1 cut(s)	1596
EaeI	YGGCCR	3 cut(s)	3, 679, 1446
Eam1104I	CTCTTC	1 cut(s)	918
EarI	CTCTTC	1 cut(s)	918
EciI	GGCGGA	1 cut(s)	442
Eco130I	CCWWGG	1 cut(s)	79
Eco31I	GGTCTC	4 cut(s)	92, 327, 477, 982
Eco47I	GGWCC	3 cut(s)	1028, 1103, 1181
Eco57I	CTGAAG	1 cut(s)	1514
Eco88I	CYCGRG	1 cut(s)	1169
EcoNI	CCTNNNNNAGG	1 cut(s)	609
EcoO109I	RGGNCCY	1 cut(s)	1103
EcoRII	CCWGG	6 cut(s)	479, 589, 622, 643, 850, 1078
EcoT14I	CCWWGG	1 cut(s)	79
EcoT22I	ATGCAT	1 cut(s)	825
ErhI	CCWWGG	1 cut(s)	79
FaeI	CATG	9 cut(s)	83, 320, 565, 664, 818, 827, 887, 1391, 1611
FalI	AAGNNNNNCTT	1 cut(s)	1712
FaqI	GGGAC	8 cut(s)	194, 200, 230, 236, 242, 278, 314, 1116
FatI	CATG	9 cut(s)	79, 316, 561, 660, 814, 823, 883, 1387, 1607
FblI	GTMKAC	1 cut(s)	1129
Fnu4HI	GCNGC	4 cut(s)	597, 1017, 1287, 1397
FokI	GGATG	5 cut(s)	392, 661, 962, 1499, 1511
Fsp4HI	GCNGC	4 cut(s)	597, 1017, 1287, 1397
FspBI	CTAG	4 cut(s)	738, 993, 1202, 1638
GlaI	GCGC	1 cut(s)	467
GluI	GCNGC	4 cut(s)	597, 1017, 1287, 1397
GsuI	CTGGAG	1 cut(s)	645
HaeIII	GGCC	8 cut(s)	5, 615, 681, 849, 929, 1071, 1095, 1448
HapII	CCGG	1 cut(s)	748
HgaI	GACGC	2 cut(s)	50, 1558
HhaI	GCGC	1 cut(s)	468
Hin1II	CATG	9 cut(s)	83, 320, 565, 664, 818, 827, 887, 1391, 1611
Hin6I	GCGC	1 cut(s)	466
HinP1I	GCGC	1 cut(s)	466
HincII	GTYRAC	2 cut(s)	1601, 1635
HindII	GTYRAC	2 cut(s)	1601, 1635
HinfI	GANTC	6 cut(s)	104, 140, 619, 724, 1172, 1687
HpaII	CCGG	1 cut(s)	748
Hpy166II	GTNNAC	8 cut(s)	521, 874, 1130, 1252, 1559, 1586, 1601, 1635
Hpy188I	TCNGA	2 cut(s)	493, 1053
Hpy188III	TCNNGA	9 cut(s)	89, 197, 317, 350, 413, 504, 1505, 1614, 1658
Hpy8I	GTNNAC	8 cut(s)	521, 874, 1130, 1252, 1559, 1586, 1601, 1635
Hpy99I	CGWCG	2 cut(s)	29, 95
HpyAV	CCTTC	5 cut(s)	8, 12, 360, 1489, 1614
HpyCH4III	ACNGT	5 cut(s)	29, 407, 419, 792, 1327
HpyCH4IV	ACGT	2 cut(s)	529, 1582
HpyF10VI	GCNNNNNNNGC	5 cut(s)	572, 935, 1286, 1393, 1445
HpyF3I	CTNAG	3 cut(s)	114, 492, 1365
HpySE526I	ACGT	2 cut(s)	529, 1582
Hsp92II	CATG	9 cut(s)	83, 320, 565, 664, 818, 827, 887, 1391, 1611
HspAI	GCGC	1 cut(s)	466
KspI	CCGCGG	1 cut(s)	68
LmnI	GCTCC	4 cut(s)	56, 69, 626, 692
Lsp1109I	GCAGC	4 cut(s)	583, 1003, 1298, 1408
LweI	GCATC	2 cut(s)	847, 1665
MabI	ACCWGGT	2 cut(s)	589, 1078
MaeI	CTAG	4 cut(s)	738, 993, 1202, 1638
MaeII	ACGT	2 cut(s)	529, 1582
MaeIII	GTNAC	7 cut(s)	29, 607, 995, 1267, 1477, 1621, 1702
MboII	GAAGA	4 cut(s)	135, 935, 1526, 1538
MflI	RGATCY	2 cut(s)	914, 1258
MhlI	GDGCHC	3 cut(s)	74, 697, 973
MlsI	TGGCCA	2 cut(s)	681, 1448
MluCI	AATT	7 cut(s)	546, 893, 1401, 1550, 1645, 1652, 1735
MluNI	TGGCCA	2 cut(s)	681, 1448
MlyI	GAGTC	2 cut(s)	718, 1181
MmeI	TCCRAC	2 cut(s)	659, 742
Mox20I	TGGCCA	2 cut(s)	681, 1448
Mph1103I	ATGCAT	1 cut(s)	825
MscI	TGGCCA	2 cut(s)	681, 1448
MseI	TTAA	6 cut(s)	867, 978, 1302, 1466, 1644, 1709
MslI	CAYNNNNRTG	1 cut(s)	123
Msp20I	TGGCCA	2 cut(s)	681, 1448
MspA1I	CMGCKG	1 cut(s)	67
MspI	CCGG	1 cut(s)	748
MspR9I	CCNGG	7 cut(s)	481, 591, 624, 645, 748, 852, 1080
Mva1269I	GAATGC	2 cut(s)	118, 748
MvaI	CCWGG	6 cut(s)	481, 591, 624, 645, 852, 1080
MvnI	CGCG	3 cut(s)	67, 414, 517
MwoI	GCNNNNNNNGC	5 cut(s)	572, 935, 1286, 1393, 1445
NciI	CCSGG	1 cut(s)	748
NcoI	CCATGG	1 cut(s)	79
NlaIII	CATG	9 cut(s)	83, 320, 565, 664, 818, 827, 887, 1391, 1611
NlaIV	GGNNCC	7 cut(s)	52, 567, 970, 1104, 1183, 1348, 1418
NmuCI	GTSAC	3 cut(s)	607, 995, 1621
NruI	TCGCGA	1 cut(s)	414
NsiI	ATGCAT	1 cut(s)	825
NspI	RCATGY	3 cut(s)	664, 827, 1391
PaeI	GCATGC	2 cut(s)	827, 1391
PaeR7I	CTCGAG	1 cut(s)	1169
PagI	TCATGA	1 cut(s)	316
PciI	ACATGT	1 cut(s)	660
PcsI	WCGNNNNNNNCGW	1 cut(s)	99
PctI	GAATGC	2 cut(s)	118, 748
PfeI	GAWTC	4 cut(s)	104, 140, 619, 1687
PfoI	TCCNGGA	1 cut(s)	622
PkrI	GCNGC	4 cut(s)	598, 1018, 1288, 1398
PleI	GAGTC	2 cut(s)	718, 1180
PpsI	GAGTC	2 cut(s)	718, 1180
PpuMI	RGGWCCY	1 cut(s)	1103
PscI	ACATGT	1 cut(s)	660
Psp5II	RGGWCCY	1 cut(s)	1103
Psp6I	CCWGG	6 cut(s)	479, 589, 622, 643, 850, 1078
PspGI	CCWGG	6 cut(s)	479, 589, 622, 643, 850, 1078
PspN4I	GGNNCC	7 cut(s)	52, 567, 970, 1104, 1183, 1348, 1418
PspPI	GGNCC	4 cut(s)	848, 1028, 1103, 1181
PspPPI	RGGWCCY	1 cut(s)	1103
PspXI	VCTCGAGB	1 cut(s)	1169
PstNI	CAGNNNCTG	1 cut(s)	1085
PsuI	RGATCY	2 cut(s)	914, 1258
RruI	TCGCGA	1 cut(s)	414
RsaI	GTAC	2 cut(s)	23, 1152
RsaNI	GTAC	2 cut(s)	22, 1151
RseI	CAYNNNNRTG	1 cut(s)	123
SacII	CCGCGG	1 cut(s)	68
SaqAI	TTAA	6 cut(s)	867, 978, 1302, 1466, 1644, 1709
SatI	GCNGC	4 cut(s)	597, 1017, 1287, 1397
Sau96I	GGNCC	4 cut(s)	848, 1028, 1103, 1181
SchI	GAGTC	2 cut(s)	718, 1181
ScrFI	CCNGG	7 cut(s)	481, 591, 624, 645, 748, 852, 1080
SduI	GDGCHC	3 cut(s)	74, 697, 973
SexAI	ACCWGGT	2 cut(s)	589, 1078
SfaNI	GCATC	2 cut(s)	847, 1665
SfcI	CTRYAG	1 cut(s)	777
Sfr274I	CTCGAG	1 cut(s)	1169
Sfr303I	CCGCGG	1 cut(s)	68
SgrBI	CCGCGG	1 cut(s)	68
SinI	GGWCC	3 cut(s)	1028, 1103, 1181
SlaI	CTCGAG	1 cut(s)	1169
SmiMI	CAYNNNNRTG	1 cut(s)	123
SmlI	CTYRAG	4 cut(s)	1097, 1169, 1505, 1729
SmoI	CTYRAG	4 cut(s)	1097, 1169, 1505, 1729
SphI	GCATGC	2 cut(s)	827, 1391
Sse9I	AATT	7 cut(s)	546, 893, 1401, 1550, 1645, 1652, 1735
SsiI	CCGC	6 cut(s)	65, 67, 84, 337, 427, 552
SspMI	CTAG	4 cut(s)	738, 993, 1202, 1638
StyD4I	CCNGG	7 cut(s)	479, 589, 622, 643, 746, 850, 1078
StyI	CCWWGG	1 cut(s)	79
TaaI	ACNGT	5 cut(s)	29, 407, 419, 792, 1327
TaiI	ACGT	2 cut(s)	532, 1585
TaqI	TCGA	5 cut(s)	90, 963, 1170, 1229, 1615
TasI	AATT	7 cut(s)	546, 893, 1401, 1550, 1645, 1652, 1735
TatI	WGTACW	1 cut(s)	1150
TfiI	GAWTC	4 cut(s)	104, 140, 619, 1687
Tru1I	TTAA	6 cut(s)	867, 978, 1302, 1466, 1644, 1709
Tru9I	TTAA	6 cut(s)	867, 978, 1302, 1466, 1644, 1709
TscAI	CASTG	2 cut(s)	847, 1296
TseFI	GTSAC	3 cut(s)	607, 995, 1621
TseI	GCWGC	4 cut(s)	596, 1016, 1286, 1396
Tsp45I	GTSAC	3 cut(s)	607, 995, 1621
TspDTI	ATGAA	6 cut(s)	801, 900, 1527, 1547, 1596, 1728
TspGWI	ACGGA	2 cut(s)	48, 1178
TspRI	CASTG	2 cut(s)	847, 1296
VpaK11BI	GGWCC	3 cut(s)	1028, 1103, 1181
XagI	CCTNNNNNAGG	1 cut(s)	609
XapI	RAATTY	2 cut(s)	893, 1550
XceI	RCATGY	3 cut(s)	664, 827, 1391
XcmI	CCANNNNNNNNNTGG	1 cut(s)	937
XhoI	CTCGAG	1 cut(s)	1169
XmiI	GTMKAC	1 cut(s)	1129
XspI	CTAG	4 cut(s)	738, 993, 1202, 1638
Zsp2I	ATGCAT	1 cut(s)	825

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.