Rmu_sc0000294.1_g000003

BSD domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000294.1
OG0010000
Physical Location & Seq
Forward (+)
6343 .. 14099
7757 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1704 bp
atgtcatggctcgcccactcgctctctaaatccctccgaatcgacggcgacgacggcgaaggccaagatcacgacgacgacgtcgtaccccaccaccacaccaacaatgaagctgacgtcccgcccaccgcctccaccaaaccccaagacaacgaaatccaatcggatgcagaagcagttgaagacgcccaaacgcgtggcgtgaaagaagacctatcggaattccagcaaaccctgacgcgccaattctggggcgtcgcctcgtttcttgcgccaccaccgccctctgatcgattagcttctccacccgattgcgatcgatccgagccggccgatcacccgcccggtcaatcgccgatggcgttgaatgaagacgaagaagaggaggaggaggaggaggagtgcgccgtcggtgtcactgacgaggtcttggccttcgctagaaacatcgcgatgcatccagagacctggttggactttcctcttgatgaagaagaagacttgggagattttgaaatgtctgatgcccagcaagagcatgctatgatgattgaacatcttgcgccgagattagctgctttgagaatcgagctttgtccgtgccatatgagcgagagttacttctggaaagtctattttgttcttctgcattcgaggctcaacaagcaggatgctgaggttttgtccacacctcaggtaatggaagccagagcaatgtggatgcaagagctacaatgtcagactccaacatcaatctctaaaatgtcagaacaggaatggtttggaagaagcacttcacatttaaaatacagttcaaatgcaatacatgaagattatgaagattactctccggtctcatcacatactcctcattatgaggatacacttcataagacgtatccttttgaatcaaccatgccttccacagccgatgagactgagaagcacccagttgagagtaatgagatgccattcattgataagtccgttatcgaagaaaagcccttcattaggactgaggataagaatgtgacagttggtccatcctctgagatactagttaatagctatgacgacgacgacgacgatgactggccagaggatgatggtgaattatatgggtgtagtggaacagctgttgctttgataaatgaagaagacatatcttttagtgatcttgaggatgatgatttccaggcaccctctaaattaaagttcatctcaaaggatgataaaaaatcttatggatctgtaggttatcctccacctggttatggtggatatccaccaccaccaaccggctatcctcagcctcctcagcctcaagttattgtccaacaaccaccaccacaacaatcgcaatccactggatgcatggaaggatgggaggggtccgagatccagtcgggttttttggcggaagttcttcatttgggggcaatttgtgcggtgtttgttccgggtccggtccaaaagctcttacctagatcgacaatggtggaggaccagggccagccgctagactgtcttcctcgtcgttcatcggaggtaaagatcaaggtggcgtgtgacttcacggtagtggcggctttgaggaagacatctttgattgaatccggcgagagcgcgccgtcttcaaggaagggaaggaggatgtggtgcagtaatccggcggatcaagatcccaacttcatcggattttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BSD

Protein Analysis

567

Amino Acids

63.31

Weight (kDa)

4.33

Isoelectric Point (pI)

72.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BSD PF03909 169 - 224 2.7e-13 BSD domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 80
AatII GACGTC 2 cut(s) 84, 120
AccB1I GGYRCC 1 cut(s) 1198
AccII CGCG 4 cut(s) 196, 241, 452, 1628
AciI CCGC 9 cut(s) 122, 129, 281, 341, 1418, 1448, 1517, 1586, 1673
AclWI GGATC 5 cut(s) 315, 1255, 1393, 1676, 1683
AcoI YGGCCR 2 cut(s) 330, 1094
AcsI RAATTY 1 cut(s) 221
AcyI GRCGYC 4 cut(s) 81, 117, 186, 255
AfaI GTAC 1 cut(s) 87
AfiI CCNNNNNNNGG 5 cut(s) 250, 1011, 1268, 1274, 1298
AflIII ACRYGT 1 cut(s) 194
AgsI TTSAA 8 cut(s) 182, 367, 515, 554, 816, 908, 1613, 1638
AhdI GACNNNNNGTC 1 cut(s) 1038
AhlI ACTAGT 1 cut(s) 1057
AjnI CCWGG 4 cut(s) 467, 1194, 1267, 1506
AleI CACNNNNGTG 1 cut(s) 1580
AluBI AGCT 8 cut(s) 113, 299, 575, 592, 730, 1068, 1136, 1477
AluI AGCT 8 cut(s) 113, 299, 575, 592, 730, 1068, 1136, 1477
Alw26I GTCTC 3 cut(s) 458, 859, 929
AlwI GGATC 5 cut(s) 315, 1255, 1393, 1676, 1683
AoxI GGCC 5 cut(s) 61, 330, 432, 1094, 1510
ApeKI GCWGC 1 cut(s) 575
ApoI RAATTY 1 cut(s) 221
Asp700I GAANNNNTTC 2 cut(s) 793, 1425
AspLEI GCGC 6 cut(s) 243, 274, 407, 565, 1628, 1630
AspS9I GGNCC 6 cut(s) 1040, 1392, 1463, 1468, 1504, 1510
AsuC2I CCSGG 2 cut(s) 345, 1461
AsuHPI GGTGA 2 cut(s) 329, 1121
AvaII GGWCC 5 cut(s) 1040, 1392, 1463, 1468, 1504
AxyI CCTNAGG 1 cut(s) 693
BalI TGGCCA 1 cut(s) 1096
BanI GGYRCC 1 cut(s) 1198
BbsI GAAGAC 8 cut(s) 189, 216, 378, 504, 1164, 1520, 1604, 1626
BbvCI CCTCAGC 3 cut(s) 675, 1308, 1317
BbvI GCAGC 1 cut(s) 562
BccI CCATC 4 cut(s) 352, 1051, 1100, 1377
BceAI ACGGC 4 cut(s) 61, 70, 392, 1615
BciT130I CCWGG 4 cut(s) 469, 1196, 1269, 1508
BciVI GTATCC 2 cut(s) 874, 909
BcnI CCSGG 2 cut(s) 345, 1461
BcoDI GTCTC 3 cut(s) 458, 859, 929
BcuI ACTAGT 1 cut(s) 1057
BfaI CTAG 4 cut(s) 441, 1058, 1485, 1520
BfmI CTRYAG 1 cut(s) 1251
BfuI GTATCC 2 cut(s) 874, 909
BisI GCNGC 3 cut(s) 576, 1517, 1587
BlsI GCNGC 3 cut(s) 577, 1518, 1588
Bme1390I CCNGG 6 cut(s) 345, 469, 1196, 1269, 1461, 1508
Bme18I GGWCC 5 cut(s) 1040, 1392, 1463, 1468, 1504
BmeRI GACNNNNNGTC 1 cut(s) 1038
BmgT120I GGNCC 6 cut(s) 1040, 1392, 1463, 1468, 1504, 1510
BmiI GGNNCC 3 cut(s) 1200, 1393, 1464
BmrFI CCNGG 6 cut(s) 345, 469, 1196, 1269, 1461, 1508
BmrI ACTGGG 1 cut(s) 944
BmsI GCATC 8 cut(s) 157, 444, 466, 514, 661, 711, 957, 1361
BmuI ACTGGG 1 cut(s) 944
BpiI GAAGAC 8 cut(s) 189, 216, 378, 504, 1164, 1520, 1604, 1626
Bpu10I CCTNAGC 3 cut(s) 675, 1308, 1317
BpuEI CTTGAG 2 cut(s) 1199, 1308
BpuMI CCSGG 2 cut(s) 345, 1461
Bsa29I ATCGAT 2 cut(s) 292, 319
BsaBI GATNNNNATC 2 cut(s) 315, 1680
BsaHI GRCGYC 4 cut(s) 81, 117, 186, 255
BsaI GGTCTC 2 cut(s) 458, 859
BsaJI CCNNGG 1 cut(s) 1507
BsaWI WCCGGW 2 cut(s) 850, 1465
BsaXI ACNNNNNCTCC 2 cut(s) 386, 416
Bsc4I CCNNNNNNNGG 5 cut(s) 250, 1011, 1268, 1274, 1298
Bse118I RCCGGY 2 cut(s) 328, 1298
Bse1I ACTGG 4 cut(s) 950, 1097, 1372, 1402
Bse21I CCTNAGG 1 cut(s) 693
Bse3DI GCAATG 1 cut(s) 720
Bse8I GATNNNNATC 2 cut(s) 315, 1680
BseBI CCWGG 4 cut(s) 469, 1196, 1269, 1508
BseCI ATCGAT 2 cut(s) 292, 319
BseDI CCNNGG 1 cut(s) 1507
BseJI GATNNNNATC 2 cut(s) 315, 1680
BseLI CCNNNNNNNGG 5 cut(s) 250, 1011, 1268, 1274, 1298
BseMI GCAATG 1 cut(s) 720
BseMII CTCAG 7 cut(s) 666, 707, 930, 1008, 1041, 1322, 1331
BseNI ACTGG 4 cut(s) 950, 1097, 1372, 1402
BsePI GCGCGC 1 cut(s) 1626
BseRI GAGGAG 8 cut(s) 398, 401, 404, 407, 410, 413, 858, 1305
BseX3I CGGCCG 1 cut(s) 330
BseXI GCAGC 1 cut(s) 562
BseYI CCCAGC 1 cut(s) 528
BsgI GTGCAG 1 cut(s) 1681
Bsh1236I CGCG 4 cut(s) 196, 241, 452, 1628
Bsh1285I CGRYCG 2 cut(s) 319, 333
BshFI GGCC 5 cut(s) 63, 332, 434, 1096, 1512
BshNI GGYRCC 1 cut(s) 1198
BshVI ATCGAT 2 cut(s) 292, 319
BsiEI CGRYCG 2 cut(s) 319, 333
BsiSI CCGG 8 cut(s) 329, 345, 851, 1299, 1460, 1466, 1617, 1670
BslFI GGGAC 1 cut(s) 104
BslI CCNNNNNNNGG 5 cut(s) 250, 1011, 1268, 1274, 1298
BsmAI GTCTC 3 cut(s) 458, 859, 929
BsmFI GGGAC 1 cut(s) 104
BsmI GAATGC 1 cut(s) 649
BsnI GGCC 5 cut(s) 63, 332, 434, 1096, 1512
Bso31I GGTCTC 2 cut(s) 458, 859
Bsp68I TCGCGA 1 cut(s) 452
BspACI CCGC 9 cut(s) 122, 129, 281, 341, 1418, 1448, 1517, 1586, 1673
BspANI GGCC 5 cut(s) 63, 332, 434, 1096, 1512
BspCNI CTCAG 7 cut(s) 667, 706, 931, 1009, 1042, 1321, 1330
BspDI ATCGAT 2 cut(s) 292, 319
BspFNI CGCG 4 cut(s) 196, 241, 452, 1628
BspLI GGNNCC 3 cut(s) 1200, 1393, 1464
BspPI GGATC 5 cut(s) 315, 1255, 1393, 1676, 1683
BspT107I GGYRCC 1 cut(s) 1198
BspTNI GGTCTC 2 cut(s) 458, 859
BsrDI GCAATG 1 cut(s) 720
BsrFI RCCGGY 2 cut(s) 328, 1298
BsrI ACTGG 4 cut(s) 950, 1097, 1372, 1402
BssAI RCCGGY 2 cut(s) 328, 1298
BssECI CCNNGG 1 cut(s) 1507
BssHII GCGCGC 1 cut(s) 1626
BssNI GRCGYC 4 cut(s) 81, 117, 186, 255
Bst2UI CCWGG 4 cut(s) 469, 1196, 1269, 1508
Bst4CI ACNGT 4 cut(s) 812, 1036, 1526, 1579
Bst6I CTCTTC 1 cut(s) 375
BstACI GRCGYC 4 cut(s) 81, 117, 186, 255
BstAPI GCANNNNNTGC 1 cut(s) 1445
BstC8I GCNNGC 5 cut(s) 12, 330, 540, 1514, 1628
BstDEI CTNAG 7 cut(s) 675, 693, 939, 1017, 1050, 1308, 1317
BstENI CCTNNNNNAGG 1 cut(s) 1009
BstFNI CGCG 4 cut(s) 196, 241, 452, 1628
BstHHI GCGC 6 cut(s) 243, 274, 407, 565, 1628, 1630
BstMAI GTCTC 3 cut(s) 458, 859, 929
BstMCI CGRYCG 2 cut(s) 319, 333
BstMWI GCNNNNNNNGC 7 cut(s) 54, 280, 609, 655, 664, 1318, 1445
BstNI CCWGG 4 cut(s) 469, 1196, 1269, 1508
BstNSI RCATGY 1 cut(s) 542
BstSCI CCNGG 6 cut(s) 343, 467, 1194, 1267, 1459, 1506
BstSFI CTRYAG 1 cut(s) 1251
BstUI CGCG 4 cut(s) 196, 241, 452, 1628
BstV1I GCAGC 1 cut(s) 562
BstV2I GAAGAC 8 cut(s) 189, 216, 378, 504, 1164, 1520, 1604, 1626
BstX2I RGATCY 3 cut(s) 1247, 1398, 1681
BstXI CCANNNNNNTGG 2 cut(s) 197, 468
BstYI RGATCY 3 cut(s) 1247, 1398, 1681
BstZI CGGCCG 1 cut(s) 330
Bsu15I ATCGAT 2 cut(s) 292, 319
Bsu36I CCTNAGG 1 cut(s) 693
BsuI GTATCC 2 cut(s) 874, 909
BsuRI GGCC 5 cut(s) 63, 332, 434, 1096, 1512
BsuTUI ATCGAT 2 cut(s) 292, 319
BtgZI GCGATG 2 cut(s) 433, 467
BtsIMutI CAGTG 2 cut(s) 417, 1365
BtuMI TCGCGA 1 cut(s) 452
Cac8I GCNNGC 5 cut(s) 12, 330, 540, 1514, 1628
CfoI GCGC 6 cut(s) 243, 274, 407, 565, 1628, 1630
Cfr10I RCCGGY 2 cut(s) 328, 1298
Cfr13I GGNCC 6 cut(s) 1040, 1392, 1463, 1468, 1504, 1510
ClaI ATCGAT 2 cut(s) 292, 319
CseI GACGC 3 cut(s) 194, 244, 247
CsiI ACCWGGT 2 cut(s) 467, 1267
Csp6I GTAC 1 cut(s) 86
CviAII CATG 5 cut(s) 6, 539, 827, 916, 1375
CviQI GTAC 1 cut(s) 86
DdeI CTNAG 7 cut(s) 675, 693, 939, 1017, 1050, 1308, 1317
DraI TTTAAA 1 cut(s) 804
DrdI GACNNNNNNGTC 1 cut(s) 80
DriI GACNNNNNGTC 1 cut(s) 1038
DseDI GACNNNNNNGTC 1 cut(s) 80
EaeI YGGCCR 2 cut(s) 330, 1094
EagI CGGCCG 1 cut(s) 330
Eam1104I CTCTTC 1 cut(s) 375
Eam1105I GACNNNNNGTC 1 cut(s) 1038
EarI CTCTTC 1 cut(s) 375
EciI GGCGGA 2 cut(s) 1433, 1688
EclXI CGGCCG 1 cut(s) 330
Eco31I GGTCTC 2 cut(s) 458, 859
Eco32I GATATC 1 cut(s) 1283
Eco47I GGWCC 5 cut(s) 1040, 1392, 1463, 1468, 1504
Eco52I CGGCCG 1 cut(s) 330
Eco81I CCTNAGG 1 cut(s) 693
EcoNI CCTNNNNNAGG 1 cut(s) 1009
EcoRI GAATTC 1 cut(s) 221
EcoRII CCWGG 4 cut(s) 467, 1194, 1267, 1506
EcoRV GATATC 1 cut(s) 1283
EcoT22I ATGCAT 2 cut(s) 459, 1376
FaeI CATG 5 cut(s) 9, 542, 830, 919, 1378
FalI AAGNNNNNCTT 2 cut(s) 778, 810
FaqI GGGAC 1 cut(s) 104
FatI CATG 5 cut(s) 5, 538, 826, 915, 1374
FauI CCCGC 2 cut(s) 129, 348
FauNDI CATATG 1 cut(s) 606
Fnu4HI GCNGC 3 cut(s) 576, 1517, 1587
Fsp4HI GCNGC 3 cut(s) 576, 1517, 1587
FspBI CTAG 4 cut(s) 441, 1058, 1485, 1520
GlaI GCGC 6 cut(s) 242, 273, 406, 564, 1627, 1629
GluI GCNGC 3 cut(s) 576, 1517, 1587
GsaI CCCAGC 1 cut(s) 532
HaeIII GGCC 5 cut(s) 63, 332, 434, 1096, 1512
HapII CCGG 8 cut(s) 329, 345, 851, 1299, 1460, 1466, 1617, 1670
HgaI GACGC 3 cut(s) 194, 244, 247
HhaI GCGC 6 cut(s) 243, 274, 407, 565, 1628, 1630
Hin1I GRCGYC 4 cut(s) 81, 117, 186, 255
Hin1II CATG 5 cut(s) 9, 542, 830, 919, 1378
Hin6I GCGC 6 cut(s) 241, 272, 405, 563, 1626, 1628
HinP1I GCGC 6 cut(s) 241, 272, 405, 563, 1626, 1628
HinfI GANTC 5 cut(s) 39, 585, 742, 908, 1613
HpaII CCGG 8 cut(s) 329, 345, 851, 1299, 1460, 1466, 1617, 1670
HphI GGTGA 2 cut(s) 329, 1121
Hpy166II GTNNAC 1 cut(s) 687
Hpy188III TCNNGA 7 cut(s) 71, 451, 461, 485, 625, 1178, 1679
Hpy8I GTNNAC 1 cut(s) 687
HpyAV CCTTC 7 cut(s) 53, 445, 930, 1015, 1373, 1636, 1641
HpyCH4III ACNGT 4 cut(s) 812, 1036, 1526, 1579
HpyCH4IV ACGT 3 cut(s) 81, 117, 896
HpyCH4V TGCA 7 cut(s) 170, 457, 649, 724, 821, 1374, 1662
HpyF10VI GCNNNNNNNGC 7 cut(s) 54, 280, 609, 655, 664, 1318, 1445
HpyF3I CTNAG 7 cut(s) 675, 693, 939, 1017, 1050, 1308, 1317
HpySE526I ACGT 3 cut(s) 81, 117, 896
Hsp92I GRCGYC 4 cut(s) 81, 117, 186, 255
Hsp92II CATG 5 cut(s) 9, 542, 830, 919, 1378
HspAI GCGC 6 cut(s) 241, 272, 405, 563, 1626, 1628
KroI GCCGGC 1 cut(s) 328
KroNI GCCGGC 1 cut(s) 330
Lsp1109I GCAGC 1 cut(s) 562
LweI GCATC 8 cut(s) 157, 444, 466, 514, 661, 711, 957, 1361
MabI ACCWGGT 2 cut(s) 467, 1267
MaeI CTAG 4 cut(s) 441, 1058, 1485, 1520
MaeII ACGT 3 cut(s) 81, 117, 896
MaeIII GTNAC 4 cut(s) 415, 617, 1030, 1568
MflI RGATCY 3 cut(s) 1247, 1398, 1681
MlsI TGGCCA 1 cut(s) 1096
MluCI AATT 5 cut(s) 221, 245, 1112, 1208, 1440
MluI ACGCGT 1 cut(s) 194
MluNI TGGCCA 1 cut(s) 1096
MlyI GAGTC 1 cut(s) 736
MmeI TCCRAC 3 cut(s) 453, 770, 1360
Mox20I TGGCCA 1 cut(s) 1096
Mph1103I ATGCAT 2 cut(s) 459, 1376
MroNI GCCGGC 1 cut(s) 328
MroXI GAANNNNTTC 2 cut(s) 793, 1425
MscI TGGCCA 1 cut(s) 1096
MseI TTAA 3 cut(s) 803, 1062, 1211
MslI CAYNNNNRTG 2 cut(s) 452, 1580
Msp20I TGGCCA 1 cut(s) 1096
MspA1I CMGCKG 1 cut(s) 1136
MspI CCGG 8 cut(s) 329, 345, 851, 1299, 1460, 1466, 1617, 1670
MspR9I CCNGG 6 cut(s) 345, 469, 1196, 1269, 1461, 1508
Mva1269I GAATGC 1 cut(s) 649
MvaI CCWGG 4 cut(s) 469, 1196, 1269, 1508
MvnI CGCG 4 cut(s) 196, 241, 452, 1628
MwoI GCNNNNNNNGC 7 cut(s) 54, 280, 609, 655, 664, 1318, 1445
NaeI GCCGGC 1 cut(s) 330
NciI CCSGG 2 cut(s) 345, 1461
NdeI CATATG 1 cut(s) 606
NgoMIV GCCGGC 1 cut(s) 328
NlaIII CATG 5 cut(s) 9, 542, 830, 919, 1378
NlaIV GGNNCC 3 cut(s) 1200, 1393, 1464
NmeAIII GCCGAG 1 cut(s) 591
NmuCI GTSAC 3 cut(s) 415, 1030, 1568
NruI TCGCGA 1 cut(s) 452
NsiI ATGCAT 2 cut(s) 459, 1376
NspI RCATGY 1 cut(s) 542
OliI CACNNNNGTG 1 cut(s) 1580
PaeI GCATGC 1 cut(s) 542
PauI GCGCGC 1 cut(s) 1626
PcsI WCGNNNNNNNCGW 6 cut(s) 48, 78, 81, 359, 1080, 1083
PctI GAATGC 1 cut(s) 649
PdiI GCCGGC 1 cut(s) 330
PdmI GAANNNNTTC 2 cut(s) 793, 1425
PfeI GAWTC 4 cut(s) 39, 585, 908, 1613
PflFI GACNNNGTC 2 cut(s) 80, 425
PkrI GCNGC 3 cut(s) 577, 1518, 1588
Ple19I CGATCG 1 cut(s) 319
PleI GAGTC 1 cut(s) 736
PpsI GAGTC 1 cut(s) 736
Psp6I CCWGG 4 cut(s) 467, 1194, 1267, 1506
PspFI CCCAGC 1 cut(s) 528
PspGI CCWGG 4 cut(s) 467, 1194, 1267, 1506
PspN4I GGNNCC 3 cut(s) 1200, 1393, 1464
PspPI GGNCC 6 cut(s) 1040, 1392, 1463, 1468, 1504, 1510
PsuI RGATCY 3 cut(s) 1247, 1398, 1681
PsyI GACNNNGTC 2 cut(s) 80, 425
PteI GCGCGC 1 cut(s) 1626
PvuI CGATCG 1 cut(s) 319
PvuII CAGCTG 1 cut(s) 1136
RruI TCGCGA 1 cut(s) 452
RsaI GTAC 1 cut(s) 87
RsaNI GTAC 1 cut(s) 86
RseI CAYNNNNRTG 2 cut(s) 452, 1580
SaqAI TTAA 3 cut(s) 803, 1062, 1211
SatI GCNGC 3 cut(s) 576, 1517, 1587
Sau96I GGNCC 6 cut(s) 1040, 1392, 1463, 1468, 1504, 1510
SchI GAGTC 1 cut(s) 736
ScrFI CCNGG 6 cut(s) 345, 469, 1196, 1269, 1461, 1508
SexAI ACCWGGT 2 cut(s) 467, 1267
SfaNI GCATC 8 cut(s) 157, 444, 466, 514, 661, 711, 957, 1361
SfcI CTRYAG 1 cut(s) 1251
SinI GGWCC 5 cut(s) 1040, 1392, 1463, 1468, 1504
SmiMI CAYNNNNRTG 2 cut(s) 452, 1580
SmlI CTYRAG 2 cut(s) 1178, 1323
SmoI CTYRAG 2 cut(s) 1178, 1323
SpeI ACTAGT 1 cut(s) 1057
SphI GCATGC 1 cut(s) 542
Sse9I AATT 5 cut(s) 221, 245, 1112, 1208, 1440
SsiI CCGC 9 cut(s) 122, 129, 281, 341, 1418, 1448, 1517, 1586, 1673
SspMI CTAG 4 cut(s) 441, 1058, 1485, 1520
StyD4I CCNGG 6 cut(s) 343, 467, 1194, 1267, 1459, 1506
TaaI ACNGT 4 cut(s) 812, 1036, 1526, 1579
TaiI ACGT 3 cut(s) 84, 120, 899
TaqI TCGA 7 cut(s) 42, 292, 319, 588, 653, 993, 1490
TasI AATT 5 cut(s) 221, 245, 1112, 1208, 1440
TauI GCSGC 2 cut(s) 1519, 1589
TfiI GAWTC 4 cut(s) 39, 585, 908, 1613
Tru1I TTAA 3 cut(s) 803, 1062, 1211
Tru9I TTAA 3 cut(s) 803, 1062, 1211
TscAI CASTG 2 cut(s) 424, 1372
TseFI GTSAC 3 cut(s) 415, 1030, 1568
TseI GCWGC 1 cut(s) 575
Tsp45I GTSAC 3 cut(s) 415, 1030, 1568
TspGWI ACGGA 2 cut(s) 588, 976
TspRI CASTG 2 cut(s) 424, 1372
Tth111I GACNNNGTC 2 cut(s) 80, 425
VpaK11BI GGWCC 5 cut(s) 1040, 1392, 1463, 1468, 1504
XagI CCTNNNNNAGG 1 cut(s) 1009
XapI RAATTY 1 cut(s) 221
XceI RCATGY 1 cut(s) 542
XcmI CCANNNNNNNNNTGG 1 cut(s) 1372
XmnI GAANNNNTTC 2 cut(s) 793, 1425
XspI CTAG 4 cut(s) 441, 1058, 1485, 1520
ZraI GACGTC 2 cut(s) 82, 118
Zsp2I ATGCAT 2 cut(s) 459, 1376
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.