Rmu_sc0000838.1_g000003

ATP-dependent DNA helicase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000838.1
OG0003343
Physical Location & Seq
Reverse (-)
19954 .. 31731
11778 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3747 bp
atggctcgaatgatgatcactcgaaaaacagtatcagcagtagcacttatgggatggacagtgttcattagcctcctaatgataagtgaagttgtgaatgcagaaaggcccctaaaagatgagcagaagccaagaaattttgttgaagaagatgtaaagcaaggagtctttgtgagaatgatgaagcttctctggcagactggagggtcttcttatcaacctgtttggcctgagatgaagtttggttggaaaattgtagtgggaacaatagttgggttctttggtgctgcattgggtagtgttggaggtgttggtggtggaggaatttttgttccgatgctcgcgttgatcgttggtttcgatcccaagtcttccaccgccatttccaagtgtatgataatgggagctgcaggctcaacagtgtacttcaatttgagacttaggcacccaacactggacatgccccttatagattatgatctggctttgctctttcagccaatgcttatgctaggaatcagcattggagttgccttcaacgtcatgtttgccgattggatggtcacagttctactcatcattcttttcctagggacagcagcaaaagctttaatgaaaggcatacaaacatggaagaaagaaacaatgatgaagaaggaagccgaaaagcagttggaatcggagtccaaacccggtgatggttctggagaagactacaaaccattacctagcggtccagtttcattgcaagatgacgaagtacctatctcgcgcaacgtttactggaaagagttgttattgcttgtgtttgtgtgggtggctttccttattgttcagattgtcaagacatataccgagacttgctccaccatgttctgggtcctgaattccttgcaggtaccaattgctgcctcagtaacagtttttgaagcgatatgcttgtggaaaggcaccagggtaattgcatcaaaaggaaaggaaatcacaaactggaagttgcatcagctatttctttactgctgctgtgggattgtagctggtatggttggtggactacttggcctcggaggcggtttcatcttgggacccctatttcttgaacttggaattcctcctcaggtagcaagtgctacatcaacctttgctatgctattctcatcctccatgtcagttgtacaatattaccttctcaaccgtttcccagttccatatgctgcttattttgttttggttgctacaattgctgcctttactggtcaacatgtcgtgagaaagatcattgcagtgctcggaagagcctccattgtcatcttcatactagcgatgacgattttcgtcagtgcaatcagcttagggggggtcggaatagcaaacatggttgagaagatggagaatcaagagtacatgggtggccagtggtggccgggggcctttgtgcctgttggtgggtcccgcattggagagaattgcaactttgttgggataccctccgtggaccctctcctacgcctagtggccagtggtggccgggggcctttgtgcctgttggtttttgaaatggcgacgaaggccgagccgtcggcggagtctccgacttcggttctcaaggaagaggatgtatgtggggagattgatgtcaaattagaggagattgatgtcaaattagagaaggaggaggagaagctcctcgaagctcgggttaaggaagaggaggcagaaacagaaaaggagcccccccacttgaatgacactcagtttagcaagttggatgagcttctaacaaagactcagctttactccgattttttgctcgagaaaatggatgacatcacgcttgatgttcccgagcagccgtgtgaacctgttgagaaaaagagaggtcgtggtttcaaaagaaaggctacttacaataatacaaaggccaagagggcagttgcagctatgcttacaaggtctaaagagggtgagaaaattgaagatgtgaacctaaccgaggaagaaagagttgagaaacagcaacaggaacttgtacctctactgactggtggaaaattgaagtcttatcaactcaaaggtgtaaagtggttgatctctttatggcaaaatgggttgaatgggatccttgcagaccaaatgggacttggaaagactatccaaaccataggttttctttctcatcttaaatctatgggactggatgggccatacttggtgattgcacctctttctaccctttccaactggattaatgaaatttcaaggtttacgccttcaatgaaggctataatctatcatggtaacaagaaagaaagggatgacatacgaaggaagcacatgcccaaatcagttggccctaacttcccaataattgttacctcatatgaagttgcgttggctgatgcaagaaaatgtttaaggcactacaactggaaatatcttgtggttgatgaaggacacagattgaaaaactccaagtgcaaattagtgcagcagttgaagtacatacctgtagagaataagattctgttgactggaacacctctgcagaataatttggctgagctttggtcattgttgaactttattttgccggatatattctcatcccatgaagaatttgagtcatggtttgacctaggaggaaagtgcaatagtgaagcaatgaaggaagaattggaagagaagagaagggctcaagtgctaccgaaactccatgccatactgcgtccctttcttctccgaagaatgaagatagatgttgagctgatgcttcctaggaaaaaggaaatcatattatatgcaaccatgacagagcatcaaaagaagtttcaggaacatctgatcaataagacactggagaaacatctaatgcttgaaaatggaagccatgtaaatggcctgaaagggaagcttaacaatttgatgatccaacttcggaagaactgcaatcatcctgaccttttagagtcggcatttgatggatcatatttctacccccctgttgaccagatagttgagcaatgtgggaaatttagcttgcttgaacgactgttgaagcggctgcttgcctgcaaacacaaggttctgatattctcacagtggactaagattttggatataatggattactattttagcgaaaaaggatttgaagtttgtagaatcgatggcaatgtgaaactagatgagcggagaagacagattgcttctttcaatgatttagacagcacttgtagaatattccttctgagcactagagctggtggactgggtatcaaccttactgcagctgatacttgtatactgtatgacagtgattggaaccctcaaatggatttgcaagccatggatagatgtcacaggattgggcaaaccaagccggttcatgtttaccggttggcaacagcacaatctgtggagggtcggatgttgaaaagagcttttagtaagttgaagcttgaacatgtagtcattggaaaaggaaagttccatcaggaaagagccaagcctgaggcagaattcttggaggaagaggatctcatagcagttctccgagaagaagaatctgctgaggacaagatgatacagacagaaatcagtgacgaagaactggagaaggtcttggatcgcagtgatctcgtggggactcctactgatgctgctgctgcacttcccctaaaggggcctggctgggaagtggtggttcctaccgctggtgggggcatgctctccacccttaatagttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000785 GO:0000786 GO:0003674 GO:0003678 GO:0003824 GO:0004003 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005694 GO:0006139 GO:0006259 GO:0006325 GO:0006342 GO:0006344 GO:0006346 GO:0006349 GO:0006355 GO:0006725 GO:0006807 GO:0006996 GO:0008026 GO:0008094 GO:0008150 GO:0008152 GO:0009292 GO:0009294 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010629 GO:0010638 GO:0010639 GO:0016043 GO:0016458 GO:0016462 GO:0016569 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019219 GO:0019222 GO:0031056 GO:0031057 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031399 GO:0031400 GO:0031401 GO:0032196 GO:0032197 GO:0032268 GO:0032269 GO:0032270 GO:0032392 GO:0032508 GO:0032991 GO:0032993 GO:0033043 GO:0033044 GO:0034641 GO:0035065 GO:0035067 GO:0040029 GO:0042623 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043412 GO:0044030 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0044764 GO:0044815 GO:0045814 GO:0045892 GO:0045934 GO:0046483 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050794 GO:0051052 GO:0051128 GO:0051129 GO:0051130 GO:0051171 GO:0051172 GO:0051173 GO:0051246 GO:0051247 GO:0051248 GO:0051252 GO:0051253 GO:0051276 GO:0051570 GO:0051574 GO:0051704 GO:0060255 GO:0065007 GO:0070035 GO:0071103 GO:0071514 GO:0071704 GO:0071840 GO:0080090 GO:0090239 GO:0090241 GO:0090304 GO:0140097 GO:1901360 GO:1901983 GO:1901984 GO:1902275 GO:1902679 GO:1903506 GO:1903507 GO:1905268 GO:1905269 GO:2000112 GO:2000113 GO:2000756 GO:2000757 GO:2001141 GO:2001251 GO:2001252
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Helicase_C SNF2_N

Protein Analysis

1248

Amino Acids

139.88

Weight (kDa)

7.06

Isoelectric Point (pI)

36.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TauE PF01925 90 - 209 6.2e-11 Sulfite exporter TauE/SafE
TauE PF01925 340 - 473 1.1e-14 Sulfite exporter TauE/SafE
ResIII PF04851 684 - 847 2.9e-09 Type III restriction enzyme, res subunit
SNF2-rel_dom PF00176 688 - 987 2.9e-81 SNF2-related domain
DEAD PF00270 702 - 850 8e-06 DEAD/DEAH box helicase
Helicase_C PF00271 1010 - 1123 3.4e-26 Helicase conserved C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 205
Acc36I ACCTGC 1 cut(s) 886
Acc65I GGTACC 1 cut(s) 898
AccB1I GGYRCC 3 cut(s) 444, 898, 950
AccB7I CCANNNNNTGG 1 cut(s) 876
AccBSI CCGCTC 1 cut(s) 3190
AccI GTMKAC 1 cut(s) 3301
AccII CGCG 2 cut(s) 344, 772
AciI CCGC 8 cut(s) 378, 732, 1071, 1453, 1583, 3058, 3190, 3711
AclI AACGTT 1 cut(s) 777
AclWI GGATC 7 cut(s) 356, 2113, 2126, 2920, 2989, 3543, 3633
AcoI YGGCCR 4 cut(s) 1411, 1421, 1515, 1525
AcsI RAATTY 8 cut(s) 136, 324, 886, 1107, 2253, 2615, 3029, 3518
AfaI GTAC 7 cut(s) 425, 762, 900, 1176, 1403, 2031, 2501
AflIII ACRYGT 2 cut(s) 1261, 3463
AgeI ACCGGT 1 cut(s) 3393
AjnI CCWGG 2 cut(s) 953, 3685
AjuI GAANNNNNNNTTGG 2 cut(s) 2657, 2689
AloI GAACNNNNNNTCC 2 cut(s) 315, 347
Alw21I GWGCWC 2 cut(s) 1290, 3254
Alw26I GTCTC 3 cut(s) 430, 851, 1593
AlwI GGATC 7 cut(s) 356, 2113, 2126, 2920, 2989, 3543, 3633
Ama87I CYCGRG 3 cut(s) 1695, 1811, 1844
ApoI RAATTY 8 cut(s) 136, 324, 886, 1107, 2253, 2615, 3029, 3518
ArsI GACNNNNNNTTYG 2 cut(s) 3094, 3126
AseI ATTAAT 1 cut(s) 2247
AsiGI ACCGGT 1 cut(s) 3393
Asp718I GGTACC 1 cut(s) 898
AspA2I CCTAGG 3 cut(s) 589, 2635, 2774
AspLEI GCGC 1 cut(s) 774
AsuC2I CCSGG 3 cut(s) 693, 1425, 1529
AsuHPI GGTGA 3 cut(s) 707, 1976, 2224
AvaI CYCGRG 3 cut(s) 1695, 1811, 1844
AvaII GGWCC 5 cut(s) 734, 880, 1085, 1449, 1495
AvrII CCTAGG 3 cut(s) 589, 2635, 2774
AxyI CCTNAGG 2 cut(s) 1116, 3510
BalI TGGCCA 2 cut(s) 1413, 1517
BamHI GGATCC 1 cut(s) 2118
BanI GGYRCC 3 cut(s) 444, 898, 950
BanII GRGCYC 2 cut(s) 1734, 2695
BauI CACGAG 1 cut(s) 3638
BbsI GAAGAC 4 cut(s) 201, 363, 717, 3202
Bbv12I GWGCWC 2 cut(s) 1290, 3254
BbvCI CCTCAGC 1 cut(s) 3570
BccI CCATC 8 cut(s) 48, 553, 692, 1381, 2192, 2972, 3161, 3498
BceAI ACGGC 2 cut(s) 1561, 1837
BcgI CGANNNNNNTGC 2 cut(s) 3619, 3653
BciT130I CCWGG 2 cut(s) 955, 3687
BciVI GTATCC 1 cut(s) 1476
BclI TGATCA 2 cut(s) 15, 2841
BcnI CCSGG 3 cut(s) 693, 1425, 1529
BcoDI GTCTC 3 cut(s) 430, 851, 1593
BfaI CTAG 9 cut(s) 512, 590, 729, 1319, 1511, 2636, 2775, 3182, 3255
BfmI CTRYAG 4 cut(s) 408, 2508, 2543, 3285
BfuAI ACCTGC 1 cut(s) 886
BfuI GTATCC 1 cut(s) 1476
BglI GCCNNNNNGGC 2 cut(s) 1068, 1928
BlnI CCTAGG 3 cut(s) 589, 2635, 2774
BlpI GCTNAGC 1 cut(s) 2559
Bme1390I CCNGG 5 cut(s) 693, 955, 1425, 1529, 3687
Bme18I GGWCC 5 cut(s) 734, 880, 1085, 1449, 1495
BmeT110I CYCGRG 3 cut(s) 1695, 1811, 1844
BmrFI CCNGG 5 cut(s) 693, 955, 1425, 1529, 3687
BmrI ACTGGG 2 cut(s) 1196, 3278
BmsI GCATC 7 cut(s) 327, 974, 1009, 2389, 2757, 2824, 3646
BmuI ACTGGG 2 cut(s) 1196, 3278
BpiI GAAGAC 4 cut(s) 201, 363, 717, 3202
BplI GAGNNNNNCTC 4 cut(s) 848, 880, 2677, 2709
BpmI CTGGAG 4 cut(s) 222, 726, 2876, 3632
Bpu10I CCTNAGC 2 cut(s) 1351, 3570
Bpu1102I GCTNAGC 1 cut(s) 2559
BpuEI CTTGAG 2 cut(s) 1589, 2679
BpuMI CCSGG 3 cut(s) 693, 1425, 1529
Bsa29I ATCGAT 1 cut(s) 3165
BsaBI GATNNNNATC 1 cut(s) 477
BsaWI WCCGGW 1 cut(s) 3393
BsaXI ACNNNNNCTCC 4 cut(s) 156, 186, 2694, 2724
Bse118I RCCGGY 2 cut(s) 3379, 3393
Bse21I CCTNAGG 2 cut(s) 1116, 3510
Bse3DI GCAATG 5 cut(s) 743, 1278, 2667, 3026, 3178
Bse8I GATNNNNATC 1 cut(s) 477
BseBI CCWGG 2 cut(s) 955, 3687
BseCI ATCGAT 1 cut(s) 3165
BseJI GATNNNNATC 1 cut(s) 477
BseMI GCAATG 5 cut(s) 743, 1278, 2667, 3026, 3178
BseMII CTCAG 9 cut(s) 222, 927, 1130, 1766, 1802, 2550, 3239, 3501, 3561
BseRI GAGGAG 6 cut(s) 1104, 1661, 1676, 1688, 1691, 1724
BseYI CCCAGC 1 cut(s) 3690
BsgI GTGCAG 2 cut(s) 2507, 3651
Bsh1236I CGCG 2 cut(s) 344, 772
BshNI GGYRCC 3 cut(s) 444, 898, 950
BshTI ACCGGT 1 cut(s) 3393
BshVI ATCGAT 1 cut(s) 3165
BsiHKAI GWGCWC 2 cut(s) 1290, 3254
BsiHKCI CYCGRG 3 cut(s) 1695, 1811, 1844
BsiSI CCGG 6 cut(s) 693, 1424, 1528, 2591, 3380, 3394
BslFI GGGAC 7 cut(s) 607, 1098, 1435, 2151, 2205, 2712, 3658
BsmAI GTCTC 3 cut(s) 430, 851, 1593
BsmFI GGGAC 7 cut(s) 607, 1098, 1435, 2151, 2205, 2712, 3658
BsmI GAATGC 1 cut(s) 103
BsoBI CYCGRG 3 cut(s) 1695, 1811, 1844
Bsp1286I GDGCHC 4 cut(s) 1290, 1734, 2695, 3254
Bsp1407I TGTACA 1 cut(s) 1174
Bsp1720I GCTNAGC 1 cut(s) 2559
Bsp19I CCATGG 1 cut(s) 3345
BspACI CCGC 8 cut(s) 378, 732, 1071, 1453, 1583, 3058, 3190, 3711
BspCNI CTCAG 9 cut(s) 223, 926, 1129, 1765, 1801, 2551, 3240, 3502, 3562
BspDI ATCGAT 1 cut(s) 3165
BspFNI CGCG 2 cut(s) 344, 772
BspMAI CTGCAG 3 cut(s) 412, 2547, 3289
BspMI ACCTGC 1 cut(s) 886
BspPI GGATC 7 cut(s) 356, 2113, 2126, 2920, 2989, 3543, 3633
BspQI GCTCTTC 1 cut(s) 1288
BspT107I GGYRCC 3 cut(s) 444, 898, 950
BsrBI CCGCTC 1 cut(s) 3190
BsrDI GCAATG 5 cut(s) 743, 1278, 2667, 3026, 3178
BsrFI RCCGGY 2 cut(s) 3379, 3393
BsrGI TGTACA 1 cut(s) 1174
BssAI RCCGGY 2 cut(s) 3379, 3393
BssNAI GTATAC 1 cut(s) 3302
BssSI CACGAG 1 cut(s) 3638
BssT1I CCWWGG 4 cut(s) 589, 2635, 2774, 3345
Bst1107I GTATAC 1 cut(s) 3302
Bst2BI CACGAG 1 cut(s) 3638
Bst2UI CCWGG 2 cut(s) 955, 3687
Bst6I CTCTTC 6 cut(s) 1288, 1605, 1701, 2673, 2678, 3525
BstAUI TGTACA 1 cut(s) 1174
BstC8I GCNNGC 7 cut(s) 342, 412, 3038, 3066, 3070, 3342, 3725
BstDSI CCRYGG 2 cut(s) 1491, 3345
BstENI CCTNNNNNAGG 1 cut(s) 1991
BstFNI CGCG 2 cut(s) 344, 772
BstHHI GCGC 1 cut(s) 774
BstMAI GTCTC 3 cut(s) 430, 851, 1593
BstNI CCWGG 2 cut(s) 955, 3687
BstNSI RCATGY 5 cut(s) 463, 1265, 2338, 3467, 3727
BstSCI CCNGG 5 cut(s) 691, 953, 1423, 1527, 3685
BstSFI CTRYAG 4 cut(s) 408, 2508, 2543, 3285
BstUI CGCG 2 cut(s) 344, 772
BstV2I GAAGAC 4 cut(s) 201, 363, 717, 3202
BstX2I RGATCY 2 cut(s) 2118, 3535
BstXI CCANNNNNNTGG 1 cut(s) 2894
BstYI RGATCY 2 cut(s) 2118, 3535
BstZ17I GTATAC 1 cut(s) 3302
Bsu15I ATCGAT 1 cut(s) 3165
Bsu36I CCTNAGG 2 cut(s) 1116, 3510
BsuI GTATCC 1 cut(s) 1476
BsuTUI ATCGAT 1 cut(s) 3165
BtgI CCRYGG 2 cut(s) 1491, 3345
BtgZI GCGATG 1 cut(s) 1337
BtsI GCAGTG 2 cut(s) 1290, 3637
BveI ACCTGC 1 cut(s) 886
Cac8I GCNNGC 7 cut(s) 342, 412, 3038, 3066, 3070, 3342, 3725
CfoI GCGC 1 cut(s) 774
Cfr10I RCCGGY 2 cut(s) 3379, 3393
ClaI ATCGAT 1 cut(s) 3165
CseI GACGC 1 cut(s) 2714
Csp6I GTAC 7 cut(s) 424, 761, 899, 1175, 1402, 2030, 2500
CspAI ACCGGT 1 cut(s) 3393
CviQI GTAC 7 cut(s) 424, 761, 899, 1175, 1402, 2030, 2500
DrdI GACNNNNNNGTC 1 cut(s) 205
DseDI GACNNNNNNGTC 1 cut(s) 205
EaeI YGGCCR 4 cut(s) 1411, 1421, 1515, 1525
Eam1104I CTCTTC 6 cut(s) 1288, 1605, 1701, 2673, 2678, 3525
EarI CTCTTC 6 cut(s) 1288, 1605, 1701, 2673, 2678, 3525
EciI GGCGGA 1 cut(s) 1598
Eco130I CCWWGG 4 cut(s) 589, 2635, 2774, 3345
Eco24I GRGCYC 2 cut(s) 1734, 2695
Eco47I GGWCC 5 cut(s) 734, 880, 1085, 1449, 1495
Eco81I CCTNAGG 2 cut(s) 1116, 3510
Eco88I CYCGRG 3 cut(s) 1695, 1811, 1844
EcoNI CCTNNNNNAGG 1 cut(s) 1991
EcoO109I RGGNCCY 7 cut(s) 108, 880, 1085, 1428, 1449, 1532, 3683
EcoRI GAATTC 3 cut(s) 886, 1107, 3518
EcoRII CCWGG 2 cut(s) 953, 3685
EcoT14I CCWWGG 4 cut(s) 589, 2635, 2774, 3345
EcoT38I GRGCYC 2 cut(s) 1734, 2695
ErhI CCWWGG 4 cut(s) 589, 2635, 2774, 3345
FalI AAGNNNNNCTT 2 cut(s) 2895, 2927
FaqI GGGAC 7 cut(s) 607, 1098, 1435, 2151, 2205, 2712, 3658
FauI CCCGC 1 cut(s) 1460
FauNDI CATATG 2 cut(s) 1210, 2380
FbaI TGATCA 2 cut(s) 15, 2841
FblI GTMKAC 1 cut(s) 3301
FriOI GRGCYC 2 cut(s) 1734, 2695
FspBI CTAG 9 cut(s) 512, 590, 729, 1319, 1511, 2636, 2775, 3182, 3255
GlaI GCGC 1 cut(s) 773
GsaI CCCAGC 1 cut(s) 3694
GsuI CTGGAG 4 cut(s) 222, 726, 2876, 3632
HapII CCGG 6 cut(s) 693, 1424, 1528, 2591, 3380, 3394
HgaI GACGC 1 cut(s) 2714
HhaI GCGC 1 cut(s) 774
Hin6I GCGC 1 cut(s) 772
HinP1I GCGC 1 cut(s) 772
HincII GTYRAC 3 cut(s) 1259, 2529, 3004
HindII GTYRAC 3 cut(s) 1259, 2529, 3004
HindIII AAGCTT 4 cut(s) 185, 606, 2909, 3455
HpaII CCGG 6 cut(s) 693, 1424, 1528, 2591, 3380, 3394
HphI GGTGA 3 cut(s) 707, 1976, 2224
Hpy99I CGWCG 2 cut(s) 1567, 1582
HpyCH4IV ACGT 2 cut(s) 540, 777
HpySE526I ACGT 2 cut(s) 540, 777
HspAI GCGC 1 cut(s) 772
KflI GGGWCCC 2 cut(s) 1085, 1449
KpnI GGTACC 1 cut(s) 902
Ksp22I TGATCA 2 cut(s) 15, 2841
LguI GCTCTTC 1 cut(s) 1288
LmnI GCTCC 4 cut(s) 404, 869, 1689, 1729
LweI GCATC 7 cut(s) 327, 974, 1009, 2389, 2757, 2824, 3646
MaeI CTAG 9 cut(s) 512, 590, 729, 1319, 1511, 2636, 2775, 3182, 3255
MaeII ACGT 2 cut(s) 540, 777
MaeIII GTNAC 6 cut(s) 562, 916, 2297, 2371, 3356, 3599
MbiI CCGCTC 1 cut(s) 3190
MfeI CAATTG 2 cut(s) 903, 1239
MflI RGATCY 2 cut(s) 2118, 3535
MhlI GDGCHC 4 cut(s) 1290, 1734, 2695, 3254
MlsI TGGCCA 2 cut(s) 1413, 1517
MluNI TGGCCA 2 cut(s) 1413, 1517
MlyI GAGTC 7 cut(s) 174, 692, 1595, 1780, 2630, 2975, 3640
MmeI TCCRAC 9 cut(s) 227, 283, 654, 1342, 1616, 1746, 2262, 2953, 3404
Mox20I TGGCCA 2 cut(s) 1413, 1517
MscI TGGCCA 2 cut(s) 1413, 1517
MseI TTAA 7 cut(s) 611, 1701, 2181, 2247, 2414, 2913, 3738
MslI CAYNNNNRTG 3 cut(s) 1283, 1743, 2892
Msp20I TGGCCA 2 cut(s) 1413, 1517
MspA1I CMGCKG 2 cut(s) 3290, 3713
MspI CCGG 6 cut(s) 693, 1424, 1528, 2591, 3380, 3394
MspR9I CCNGG 5 cut(s) 693, 955, 1425, 1529, 3687
MunI CAATTG 2 cut(s) 903, 1239
Mva1269I GAATGC 1 cut(s) 103
MvaI CCWGG 2 cut(s) 955, 3687
MvnI CGCG 2 cut(s) 344, 772
NciI CCSGG 3 cut(s) 693, 1425, 1529
NcoI CCATGG 1 cut(s) 3345
NdeI CATATG 2 cut(s) 1210, 2380
NmeAIII GCCGAG 1 cut(s) 1597
NmuCI GTSAC 3 cut(s) 562, 3356, 3599
NspI RCATGY 5 cut(s) 463, 1265, 2338, 3467, 3727
PaeI GCATGC 1 cut(s) 3727
PaeR7I CTCGAG 1 cut(s) 1811
PciI ACATGT 2 cut(s) 1261, 3463
PciSI GCTCTTC 1 cut(s) 1288
PcsI WCGNNNNNNNCGW 2 cut(s) 348, 357
PctI GAATGC 1 cut(s) 103
PfeI GAWTC 6 cut(s) 516, 677, 1393, 2521, 3162, 3563
PflMI CCANNNNNTGG 1 cut(s) 876
PinAI ACCGGT 1 cut(s) 3393
PleI GAGTC 7 cut(s) 173, 691, 1594, 1780, 2629, 2974, 3640
PpsI GAGTC 7 cut(s) 173, 691, 1594, 1780, 2629, 2974, 3640
PpuMI RGGWCCY 3 cut(s) 880, 1085, 1449
PscI ACATGT 2 cut(s) 1261, 3463
PshBI ATTAAT 1 cut(s) 2247
Psp1406I AACGTT 1 cut(s) 777
Psp5II RGGWCCY 3 cut(s) 880, 1085, 1449
Psp6I CCWGG 2 cut(s) 953, 3685
PspFI CCCAGC 1 cut(s) 3690
PspGI CCWGG 2 cut(s) 953, 3685
PspPPI RGGWCCY 3 cut(s) 880, 1085, 1449
PstI CTGCAG 3 cut(s) 412, 2547, 3289
PsuI RGATCY 2 cut(s) 2118, 3535
PvuII CAGCTG 1 cut(s) 3290
RsaI GTAC 7 cut(s) 425, 762, 900, 1176, 1403, 2031, 2501
RsaNI GTAC 7 cut(s) 424, 761, 899, 1175, 1402, 2030, 2500
RseI CAYNNNNRTG 3 cut(s) 1283, 1743, 2892
SapI GCTCTTC 1 cut(s) 1288
SaqAI TTAA 7 cut(s) 611, 1701, 2181, 2247, 2414, 2913, 3738
SchI GAGTC 7 cut(s) 174, 692, 1595, 1780, 2630, 2975, 3640
ScrFI CCNGG 5 cut(s) 693, 955, 1425, 1529, 3687
SduI GDGCHC 4 cut(s) 1290, 1734, 2695, 3254
SfaNI GCATC 7 cut(s) 327, 974, 1009, 2389, 2757, 2824, 3646
SfcI CTRYAG 4 cut(s) 408, 2508, 2543, 3285
Sfr274I CTCGAG 1 cut(s) 1811
SinI GGWCC 5 cut(s) 734, 880, 1085, 1449, 1495
SlaI CTCGAG 1 cut(s) 1811
SmiMI CAYNNNNRTG 3 cut(s) 1283, 1743, 2892
SmlI CTYRAG 3 cut(s) 1604, 1811, 2694
SmoI CTYRAG 3 cut(s) 1604, 1811, 2694
SphI GCATGC 1 cut(s) 3727
SsiI CCGC 8 cut(s) 378, 732, 1071, 1453, 1583, 3058, 3190, 3711
SspI AATATT 2 cut(s) 1181, 3240
SspMI CTAG 9 cut(s) 512, 590, 729, 1319, 1511, 2636, 2775, 3182, 3255
StyD4I CCNGG 5 cut(s) 691, 953, 1423, 1527, 3685
StyI CCWWGG 4 cut(s) 589, 2635, 2774, 3345
TaiI ACGT 2 cut(s) 543, 780
TaqI TCGA 6 cut(s) 7, 22, 360, 1689, 1812, 3165
TatI WGTACW 4 cut(s) 423, 1174, 1401, 2499
TauI GCSGC 1 cut(s) 3061
TfiI GAWTC 6 cut(s) 516, 677, 1393, 2521, 3162, 3563
Tru1I TTAA 7 cut(s) 611, 1701, 2181, 2247, 2414, 2913, 3738
Tru9I TTAA 7 cut(s) 611, 1701, 2181, 2247, 2414, 2913, 3738
TseFI GTSAC 3 cut(s) 562, 3356, 3599
Tsp45I GTSAC 3 cut(s) 562, 3356, 3599
TspGWI ACGGA 1 cut(s) 1480
Van91I CCANNNNNTGG 1 cut(s) 876
VpaK11BI GGWCC 5 cut(s) 734, 880, 1085, 1449, 1495
VspI ATTAAT 1 cut(s) 2247
XagI CCTNNNNNAGG 1 cut(s) 1991
XapI RAATTY 8 cut(s) 136, 324, 886, 1107, 2253, 2615, 3029, 3518
XceI RCATGY 5 cut(s) 463, 1265, 2338, 3467, 3727
XcmI CCANNNNNNNNNTGG 1 cut(s) 2138
XhoI CTCGAG 1 cut(s) 1811
XmaJI CCTAGG 3 cut(s) 589, 2635, 2774
XmiI GTMKAC 1 cut(s) 3301
XspI CTAG 9 cut(s) 512, 590, 729, 1319, 1511, 2636, 2775, 3182, 3255
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.