Rmu_sc0001301.1_g000023

Plant calmodulin-binding domain

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001301.1
Physical Location & Seq
Forward (+)
100916 .. 102996
2081 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001301.1_g000023.1.cds

Sequence Viewer

Length: 1653 bp
atgtgggtggcgcggcctgaggtggccggaaaaccgaaatttggctggaaaactcaaaaatgcgtcggccggaattcttacttgctgcgccttccaccaccacgatcgccatacgctgccaccgcagggagggagaggaagacgagacagtccaaatgggaccggtttcacggccggaggtggccggaaaagtcgtcggcgaagccgagaaggcaaatgttgtgtgatgacaatgaaacgcctgctcaacaagaagtggggatcaatttctttgtggaaatatttgctaaaaggaaggaagacgatgctcagacatttgttgaggatatacctgaagcagaaatcatagattgctttactgaagaggagcaaaaagaagatgtggcggataaagaataccaacctcctatggatcaagaagaacctgccatgagaagctgttcgagtgagagtgactctgatggactttcgagcattgaagtagattatgccaattctgaagcaactgacatggagtgggaggaagggcaattttcgcttgcagtgctgtatgatgatgatgatgatgaatcaagttcaaatgctgggttttcatcaattcaagatggtgatatgcatgaagaacctgtgatcaagtctgatgccattgtttccgactgcaatgacatcattcatgattactatgaagattcatttgaagaagacagtgaactatcagacacagaaatagagatatcttcatcttcaatacaagagccaactgagcgcctaacagcaactagtgaggaagttcaagagaaaaccagagtttttgtagcagaggatcatgaaatggagtctcatcttggagatgttgaaagccactacactgctgcttgtgagacgaatgaagcttcagatagccaaccaaggaatggatttcaagataatggaacaactatgtcgacaagtaaccacatttccaatgctgctcaggatatcagcacaacatatgaagctgaaacaaacgcagagaaagaggattcagaaacagataaaagtgttgtcactgttgtttctggaaatcaaatggaagagacacagaaagttgaagacaccaaatcctcagcagatatccagatttctgattcagcaaaaactatggttgtacatgatgaagatgatagccaaggtattgttgatgaaaacacttttgttgacagtaaagataacctggccaatggggagtacacagataatgctaaagctgaatatgaatatcatatcttcacagagaaggatcaaagtgaatttaagaaggaaaagatctcaagttctagtgaaggtgaggatcagagtgatctaaagctgaagcaaatagatgtagcagaaaacagtggtggagacattgatagaatggaagtggacaacacttcagagccagaagcagcagaaactttcctcatggccaatagtagcatcagtccagggatgaagagaaattttcccatcaagaaagcaattcggatgaagaactgcaatacacaaaccggaaatggaaaatcaattgcacgagaagtatcaaggatgaggaagaacaatggaaatataatcaaagaaaacccaattacctgccgttggttcctggccctgaagcagagaaggttgacttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

550

Amino Acids

62.0

Weight (kDa)

4.43

Isoelectric Point (pI)

56.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 148
Acc36I ACCTGC 2 cut(s) 433, 1619
AccB7I CCANNNNNTGG 1 cut(s) 914
AccI GTMKAC 1 cut(s) 944
AccII CGCG 1 cut(s) 13
AciI CCGC 3 cut(s) 13, 123, 386
AclWI GGATC 5 cut(s) 269, 420, 831, 1287, 1338
AcoI YGGCCR 6 cut(s) 24, 67, 172, 182, 1215, 1446
AcsI RAATTY 4 cut(s) 38, 73, 1289, 1480
AcuI CTGAAG 7 cut(s) 354, 381, 519, 879, 1370, 1398, 1652
AfaI GTAC 2 cut(s) 1149, 1229
AfiI CCNNNNNNNGG 5 cut(s) 41, 126, 129, 914, 1617
AgeI ACCGGT 1 cut(s) 162
AgsI TTSAA 9 cut(s) 479, 579, 602, 698, 747, 794, 857, 923, 1091
AhlI ACTAGT 1 cut(s) 779
AjnI CCWGG 3 cut(s) 1212, 1465, 1623
AluBI AGCT 5 cut(s) 438, 893, 998, 1247, 1348
AluI AGCT 5 cut(s) 438, 893, 998, 1247, 1348
Alw26I GTCTC 5 cut(s) 139, 843, 875, 1070, 1377
AlwI GGATC 5 cut(s) 269, 420, 831, 1287, 1338
AoxI GGCC 8 cut(s) 14, 24, 67, 172, 182, 1215, 1446, 1626
ApeKI GCWGC 5 cut(s) 85, 116, 872, 968, 1427
ApoI RAATTY 4 cut(s) 38, 73, 1289, 1480
AsiGI ACCGGT 1 cut(s) 162
Asp700I GAANNNNTTC 1 cut(s) 439
AspLEI GCGC 3 cut(s) 13, 90, 768
AspS9I GGNCC 2 cut(s) 160, 1627
AsuHPI GGTGA 2 cut(s) 620, 1337
AvaII GGWCC 1 cut(s) 160
AxyI CCTNAGG 1 cut(s) 18
BalI TGGCCA 2 cut(s) 1217, 1448
BauI CACGAG 1 cut(s) 1551
BbsI GAAGAC 4 cut(s) 146, 306, 708, 1098
BbvCI CCTCAGC 1 cut(s) 1105
BbvI GCAGC 5 cut(s) 72, 103, 859, 955, 1439
BccI CCATC 3 cut(s) 455, 599, 1496
BceAI ACGGC 2 cut(s) 187, 1599
BciT130I CCWGG 3 cut(s) 1214, 1467, 1625
BclI TGATCA 1 cut(s) 630
BcoDI GTCTC 5 cut(s) 139, 843, 875, 1070, 1377
BcuI ACTAGT 1 cut(s) 779
BfaI CTAG 2 cut(s) 780, 1317
BfoI RGCGCY 1 cut(s) 769
BfuAI ACCTGC 2 cut(s) 433, 1619
BglI GCCNNNNNGGC 1 cut(s) 211
BglII AGATCT 1 cut(s) 1305
BisI GCNGC 6 cut(s) 14, 86, 117, 873, 969, 1428
BlsI GCNGC 6 cut(s) 15, 87, 118, 874, 970, 1429
Bme1390I CCNGG 3 cut(s) 1214, 1467, 1625
Bme18I GGWCC 1 cut(s) 160
BmgT120I GGNCC 2 cut(s) 160, 1627
BmiI GGNNCC 2 cut(s) 161, 1622
BmrFI CCNGG 3 cut(s) 1214, 1467, 1625
BmsI GCATC 3 cut(s) 295, 631, 1467
BpiI GAAGAC 4 cut(s) 146, 306, 708, 1098
BplI GAGNNNNNCTC 2 cut(s) 440, 472
Bpu10I CCTNAGC 2 cut(s) 972, 1105
BpuEI CTTGAG 1 cut(s) 1294
BsaJI CCNNGG 3 cut(s) 908, 1168, 1466
BsaWI WCCGGW 2 cut(s) 162, 1529
Bsc4I CCNNNNNNNGG 5 cut(s) 41, 126, 129, 914, 1617
Bse118I RCCGGY 1 cut(s) 162
Bse21I CCTNAGG 1 cut(s) 18
Bse3DI GCAATG 1 cut(s) 667
BseBI CCWGG 3 cut(s) 1214, 1467, 1625
BseDI CCNNGG 3 cut(s) 908, 1168, 1466
BseGI GGATG 3 cut(s) 1476, 1512, 1572
BseLI CCNNNNNNNGG 5 cut(s) 41, 126, 129, 914, 1617
BseMI GCAATG 1 cut(s) 667
BseMII CTCAG 5 cut(s) 9, 323, 753, 986, 1119
BseRI GAGGAG 1 cut(s) 380
BseX3I CGGCCG 2 cut(s) 67, 172
BseXI GCAGC 5 cut(s) 72, 103, 859, 955, 1439
BseYI CCCAGC 1 cut(s) 584
Bsh1236I CGCG 1 cut(s) 13
Bsh1285I CGRYCG 3 cut(s) 70, 107, 175
BshFI GGCC 8 cut(s) 16, 26, 69, 174, 184, 1217, 1448, 1628
BshTI ACCGGT 1 cut(s) 162
BsiEI CGRYCG 3 cut(s) 70, 107, 175
BsiSI CCGG 6 cut(s) 27, 70, 163, 175, 185, 1530
BslFI GGGAC 1 cut(s) 173
BslI CCNNNNNNNGG 5 cut(s) 41, 126, 129, 914, 1617
BsmAI GTCTC 5 cut(s) 139, 843, 875, 1070, 1377
BsmBI CGTCTC 1 cut(s) 875
BsmFI GGGAC 1 cut(s) 173
BsnI GGCC 8 cut(s) 16, 26, 69, 174, 184, 1217, 1448, 1628
Bsp1407I TGTACA 1 cut(s) 1147
Bsp143I GATC 9 cut(s) 104, 261, 412, 630, 823, 1279, 1305, 1330, 1339
BspACI CCGC 3 cut(s) 13, 123, 386
BspANI GGCC 8 cut(s) 16, 26, 69, 174, 184, 1217, 1448, 1628
BspCNI CTCAG 5 cut(s) 10, 322, 754, 985, 1118
BspFNI CGCG 1 cut(s) 13
BspHI TCATGA 2 cut(s) 673, 826
BspLI GGNNCC 2 cut(s) 161, 1622
BspMI ACCTGC 2 cut(s) 433, 1619
BspPI GGATC 5 cut(s) 269, 420, 831, 1287, 1338
BsrDI GCAATG 1 cut(s) 667
BsrFI RCCGGY 1 cut(s) 162
BsrGI TGTACA 1 cut(s) 1147
BssAI RCCGGY 1 cut(s) 162
BssECI CCNNGG 3 cut(s) 908, 1168, 1466
BssMI GATC 9 cut(s) 104, 261, 412, 630, 823, 1279, 1305, 1330, 1339
BssSI CACGAG 1 cut(s) 1551
BssT1I CCWWGG 2 cut(s) 908, 1168
Bst2BI CACGAG 1 cut(s) 1551
Bst2UI CCWGG 3 cut(s) 1214, 1467, 1625
Bst4CI ACNGT 5 cut(s) 150, 707, 1051, 1202, 1376
Bst6I CTCTTC 3 cut(s) 357, 1068, 1469
BstAUI TGTACA 1 cut(s) 1147
BstC8I GCNNGC 2 cut(s) 243, 540
BstDEI CTNAG 5 cut(s) 18, 309, 762, 972, 1105
BstF5I GGATG 3 cut(s) 1476, 1512, 1572
BstFNI CGCG 1 cut(s) 13
BstH2I RGCGCY 1 cut(s) 769
BstHHI GCGC 3 cut(s) 13, 90, 768
BstKTI GATC 9 cut(s) 107, 264, 415, 633, 826, 1282, 1308, 1333, 1342
BstMAI GTCTC 5 cut(s) 139, 843, 875, 1070, 1377
BstMBI GATC 9 cut(s) 104, 261, 412, 630, 823, 1279, 1305, 1330, 1339
BstMCI CGRYCG 3 cut(s) 70, 107, 175
BstMWI GCNNNNNNNGC 5 cut(s) 122, 211, 535, 544, 763
BstNI CCWGG 3 cut(s) 1214, 1467, 1625
BstSCI CCNGG 3 cut(s) 1212, 1465, 1623
BstUI CGCG 1 cut(s) 13
BstV1I GCAGC 5 cut(s) 72, 103, 859, 955, 1439
BstV2I GAAGAC 4 cut(s) 146, 306, 708, 1098
BstX2I RGATCY 1 cut(s) 1305
BstYI RGATCY 1 cut(s) 1305
BstZI CGGCCG 2 cut(s) 67, 172
Bsu36I CCTNAGG 1 cut(s) 18
BsuRI GGCC 8 cut(s) 16, 26, 69, 174, 184, 1217, 1448, 1628
BtsCI GGATG 3 cut(s) 1476, 1512, 1572
BtsI GCAGTG 2 cut(s) 549, 867
BtsIMutI CAGTG 5 cut(s) 549, 712, 867, 1047, 1381
BveI ACCTGC 2 cut(s) 433, 1619
Cac8I GCNNGC 2 cut(s) 243, 540
CciI TCATGA 2 cut(s) 673, 826
CfoI GCGC 3 cut(s) 13, 90, 768
Cfr10I RCCGGY 1 cut(s) 162
Cfr13I GGNCC 2 cut(s) 160, 1627
CseI GACGC 1 cut(s) 52
Csp6I GTAC 2 cut(s) 1148, 1228
CspAI ACCGGT 1 cut(s) 162
CviAII CATG 7 cut(s) 430, 511, 617, 674, 827, 1151, 1444
CviQI GTAC 2 cut(s) 1148, 1228
DdeI CTNAG 5 cut(s) 18, 309, 762, 972, 1105
DpnI GATC 9 cut(s) 106, 263, 414, 632, 825, 1281, 1307, 1332, 1341
DpnII GATC 9 cut(s) 104, 261, 412, 630, 823, 1279, 1305, 1330, 1339
DrdI GACNNNNNNGTC 1 cut(s) 148
DseDI GACNNNNNNGTC 1 cut(s) 148
EaeI YGGCCR 6 cut(s) 24, 67, 172, 182, 1215, 1446
EagI CGGCCG 2 cut(s) 67, 172
Eam1104I CTCTTC 3 cut(s) 357, 1068, 1469
EarI CTCTTC 3 cut(s) 357, 1068, 1469
EciI GGCGGA 1 cut(s) 401
EclXI CGGCCG 2 cut(s) 67, 172
Eco130I CCWWGG 2 cut(s) 908, 1168
Eco32I GATATC 3 cut(s) 735, 979, 1114
Eco47I GGWCC 1 cut(s) 160
Eco52I CGGCCG 2 cut(s) 67, 172
Eco57I CTGAAG 7 cut(s) 354, 381, 519, 879, 1370, 1398, 1652
Eco81I CCTNAGG 1 cut(s) 18
EcoRI GAATTC 1 cut(s) 73
EcoRII CCWGG 3 cut(s) 1212, 1465, 1623
EcoRV GATATC 3 cut(s) 735, 979, 1114
EcoT14I CCWWGG 2 cut(s) 908, 1168
EcoT22I ATGCAT 1 cut(s) 618
ErhI CCWWGG 2 cut(s) 908, 1168
Esp3I CGTCTC 1 cut(s) 875
FaeI CATG 7 cut(s) 433, 514, 620, 677, 830, 1154, 1447
FalI AAGNNNNNCTT 1 cut(s) 1633
FaqI GGGAC 1 cut(s) 173
FatI CATG 7 cut(s) 429, 510, 616, 673, 826, 1150, 1443
FauNDI CATATG 1 cut(s) 991
FbaI TGATCA 1 cut(s) 630
FblI GTMKAC 1 cut(s) 944
Fnu4HI GCNGC 6 cut(s) 14, 86, 117, 873, 969, 1428
FokI GGATG 3 cut(s) 1483, 1519, 1579
Fsp4HI GCNGC 6 cut(s) 14, 86, 117, 873, 969, 1428
FspBI CTAG 2 cut(s) 780, 1317
GlaI GCGC 3 cut(s) 12, 89, 767
GluI GCNGC 6 cut(s) 14, 86, 117, 873, 969, 1428
GsaI CCCAGC 1 cut(s) 588
HaeII RGCGCY 1 cut(s) 769
HaeIII GGCC 8 cut(s) 16, 26, 69, 174, 184, 1217, 1448, 1628
HapII CCGG 6 cut(s) 27, 70, 163, 175, 185, 1530
HgaI GACGC 1 cut(s) 52
HhaI GCGC 3 cut(s) 13, 90, 768
Hin1II CATG 7 cut(s) 433, 514, 620, 677, 830, 1154, 1447
Hin6I GCGC 3 cut(s) 11, 88, 766
HinP1I GCGC 3 cut(s) 11, 88, 766
HincII GTYRAC 3 cut(s) 945, 1198, 1647
HindII GTYRAC 3 cut(s) 945, 1198, 1647
HindIII AAGCTT 1 cut(s) 891
HinfI GANTC 6 cut(s) 455, 569, 689, 836, 1022, 1127
HpaII CCGG 6 cut(s) 27, 70, 163, 175, 185, 1530
HphI GGTGA 2 cut(s) 620, 1337
Hpy166II GTNNAC 6 cut(s) 710, 945, 1198, 1230, 1405, 1647
Hpy8I GTNNAC 6 cut(s) 710, 945, 1198, 1230, 1405, 1647
Hpy99I CGWCG 2 cut(s) 68, 199
HpyAV CCTTC 8 cut(s) 101, 204, 289, 518, 1270, 1291, 1316, 1635
HpyCH4III ACNGT 5 cut(s) 150, 707, 1051, 1202, 1376
HpyCH4V TGCA 5 cut(s) 542, 616, 660, 1518, 1550
HpyF10VI GCNNNNNNNGC 5 cut(s) 122, 211, 535, 544, 763
HpyF3I CTNAG 5 cut(s) 18, 309, 762, 972, 1105
Hsp92II CATG 7 cut(s) 433, 514, 620, 677, 830, 1154, 1447
HspAI GCGC 3 cut(s) 11, 88, 766
Ksp22I TGATCA 1 cut(s) 630
Kzo9I GATC 9 cut(s) 104, 261, 412, 630, 823, 1279, 1305, 1330, 1339
LmnI GCTCC 1 cut(s) 367
Lsp1109I GCAGC 5 cut(s) 72, 103, 859, 955, 1439
LweI GCATC 3 cut(s) 295, 631, 1467
MaeI CTAG 2 cut(s) 780, 1317
MaeIII GTNAC 3 cut(s) 452, 950, 1045
MalI GATC 9 cut(s) 106, 263, 414, 632, 825, 1281, 1307, 1332, 1341
MboI GATC 9 cut(s) 104, 261, 412, 630, 823, 1279, 1305, 1330, 1339
MfeI CAATTG 1 cut(s) 1545
MflI RGATCY 1 cut(s) 1305
MlsI TGGCCA 2 cut(s) 1217, 1448
MluNI TGGCCA 2 cut(s) 1217, 1448
MlyI GAGTC 2 cut(s) 449, 845
MmeI TCCRAC 1 cut(s) 678
Mox20I TGGCCA 2 cut(s) 1217, 1448
Mph1103I ATGCAT 1 cut(s) 618
MroXI GAANNNNTTC 1 cut(s) 439
MscI TGGCCA 2 cut(s) 1217, 1448
MseI TTAA 1 cut(s) 1293
Msp20I TGGCCA 2 cut(s) 1217, 1448
MspI CCGG 6 cut(s) 27, 70, 163, 175, 185, 1530
MspR9I CCNGG 3 cut(s) 1214, 1467, 1625
MunI CAATTG 1 cut(s) 1545
MvaI CCWGG 3 cut(s) 1214, 1467, 1625
MvnI CGCG 1 cut(s) 13
MwoI GCNNNNNNNGC 5 cut(s) 122, 211, 535, 544, 763
NdeI CATATG 1 cut(s) 991
NdeII GATC 9 cut(s) 104, 261, 412, 630, 823, 1279, 1305, 1330, 1339
NlaIII CATG 7 cut(s) 433, 514, 620, 677, 830, 1154, 1447
NlaIV GGNNCC 2 cut(s) 161, 1622
NmeAIII GCCGAG 1 cut(s) 231
NmuCI GTSAC 2 cut(s) 452, 1045
NsiI ATGCAT 1 cut(s) 618
PagI TCATGA 2 cut(s) 673, 826
PcsI WCGNNNNNNNCGW 1 cut(s) 203
PdmI GAANNNNTTC 1 cut(s) 439
PfeI GAWTC 4 cut(s) 569, 689, 1022, 1127
PflMI CCANNNNNTGG 1 cut(s) 914
PinAI ACCGGT 1 cut(s) 162
PkrI GCNGC 6 cut(s) 15, 87, 118, 874, 970, 1429
Ple19I CGATCG 1 cut(s) 107
PleI GAGTC 2 cut(s) 449, 844
PpsI GAGTC 2 cut(s) 449, 844
Psp6I CCWGG 3 cut(s) 1212, 1465, 1623
PspFI CCCAGC 1 cut(s) 584
PspGI CCWGG 3 cut(s) 1212, 1465, 1623
PspN4I GGNNCC 2 cut(s) 161, 1622
PspPI GGNCC 2 cut(s) 160, 1627
PsuI RGATCY 1 cut(s) 1305
PvuI CGATCG 1 cut(s) 107
RsaI GTAC 2 cut(s) 1149, 1229
RsaNI GTAC 2 cut(s) 1148, 1228
SalI GTCGAC 1 cut(s) 943
SaqAI TTAA 1 cut(s) 1293
SatI GCNGC 6 cut(s) 14, 86, 117, 873, 969, 1428
Sau3AI GATC 9 cut(s) 104, 261, 412, 630, 823, 1279, 1305, 1330, 1339
Sau96I GGNCC 2 cut(s) 160, 1627
SchI GAGTC 2 cut(s) 449, 845
ScrFI CCNGG 3 cut(s) 1214, 1467, 1625
SfaNI GCATC 3 cut(s) 295, 631, 1467
SinI GGWCC 1 cut(s) 160
SmlI CTYRAG 1 cut(s) 1309
SmoI CTYRAG 1 cut(s) 1309
SpeI ACTAGT 1 cut(s) 779
SsiI CCGC 3 cut(s) 13, 123, 386
SspI AATATT 1 cut(s) 282
SspMI CTAG 2 cut(s) 780, 1317
StyD4I CCNGG 3 cut(s) 1212, 1465, 1623
StyI CCWWGG 2 cut(s) 908, 1168
TaaI ACNGT 5 cut(s) 150, 707, 1051, 1202, 1376
TaqI TCGA 3 cut(s) 443, 470, 944
TatI WGTACW 2 cut(s) 1147, 1227
TauI GCSGC 1 cut(s) 16
TfiI GAWTC 4 cut(s) 569, 689, 1022, 1127
Tru1I TTAA 1 cut(s) 1293
Tru9I TTAA 1 cut(s) 1293
TscAI CASTG 5 cut(s) 549, 712, 874, 1054, 1381
TseFI GTSAC 2 cut(s) 452, 1045
TseI GCWGC 5 cut(s) 85, 116, 872, 968, 1427
Tsp45I GTSAC 2 cut(s) 452, 1045
TspRI CASTG 5 cut(s) 549, 712, 874, 1054, 1381
Van91I CCANNNNNTGG 1 cut(s) 914
VpaK11BI GGWCC 1 cut(s) 160
XapI RAATTY 4 cut(s) 38, 73, 1289, 1480
XcmI CCANNNNNNNNNTGG 1 cut(s) 911
XmiI GTMKAC 1 cut(s) 944
XmnI GAANNNNTTC 1 cut(s) 439
XspI CTAG 2 cut(s) 780, 1317
Zsp2I ATGCAT 1 cut(s) 618
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.