Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001852.1

Orthogroup ID

OG0007545

Physical Location & Seq

Genomic Coordinates Forward (+)

122690 .. 134286

Gene Structure 11597 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001852.1_g000027.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4455 bp

atgagttcttttcgccgggaaaacgacggccgccggccaatatgttgttctccaactccccgttttatccaggttatcttggatgatacttctagagacgtcaaacttggtattccaaagaaatttgtgaatgaatatggtcagtgtctatcaaattcagtatgtcttaagcttccaagtggctccgaatggaaagtagaagtgacaagaagcaatggaaaggtttggtttgagaagtgttggccagagttctcaaagttttactctcttagcatcggtgattttctagtttttgaatatgaaggggattctgaattccacgttttcatatttgatagaagcaccacagagattgactatcccataaaaaggcccaagatggaagaagctcctgaagatgaattctctgttgaaatcttggaggacattccacccagcccaaaaacaagggagaaaactccattaccgtgtcgtcaatcttacaagaaaatgaagacaagtttgactggtaaagcagaccagatgtttgaaaatgagaacaccgaaccttttgagaatccaaagaaaaacaaagattctcattgctctgcatcaaaaatcaaaagtgtaagtggttttccagcaaaaatagatggtggaggctcatctagcactgagaggtttttaaagcaatcacctgagttttgtggggagaagcatacatcaaatataaatgaaaaagccctaatacagagaagcattgcttccaaatctgaaaagccttatttcaaggttgtcatgcggcgctcatatattcaaaaaggttatttgtctgtgccatctgagttttccaagagacatcttacaaagaagcctgctactgtgatccttcaagttttggatggaagaacttggtccgttcaattgaagtatcatcatgaacgctcagaagctagattccagagttgttggccagtatttgtaagggagaataatttgaaagttggtgatgcatgtgtctttaccttaattaactgcattgcatttgtatttgaagtggtcttttatcctgccgcagaagctgcaaattgccccttgtcaccaggtggaagaggagcaatttatcaagtcaaaagtaagggaagtccaataatagaagtagaatctgaatgcggtgtgatatgtggaattggtgtatctggttctcttgaaactggcaagaacaaaatgtcaaagactagtgtgcaggttactgaaaggccctcttcatctttgacggctccattggataatcatcatgaagctgccaacaacttcgtctcagagaatccctttttcaaagtcactttgggttcctcccatatggagaagtcagttgtgcatgtaccagctagttttgcttggagtttcattaaaaggaagaaacaaaaagtgatgcttcaggtcacagatagattgtggcctgtggatttgatagcatttaagccatctttagcttcattttcttctggctgggccacatttgttgaggaatattcattaagaagagttccaaggagttatgtgaagaaatatgagaagaaatatggagaagagctatcaaatatcgtacatcttaagcttccatgtggtacagaatgggaaatagaagtcacaagacataatggtgtcttttggttcgacaagggttgggaaaccttttgcaagttttactccatcgagtctcgctactcgctagtttttcaatatgaagggaattctagattcaaagttaacatatttgatagaacaaactcagagattgagtatcctatcaaaaccccgaagaaggaagaaaatgatgtagatgatcaatttccaccggctagtcctctgctgcctaaaaagaacaatatagcaagttcaaatggtgacaaaaaggatcttcctgcggaagtagatgagggagacaagtctagtagtactcaaagatcacaaaaaccaacaactgaggttcttgggaggatgcacccttcgactacaagaggaagtggagctgtacagacagttaaagaattcaagtacactgagcagccttcttggagcacaacgagaacttggactgttggaatgaaatatgaaaaagaaagagccaaattccaatctggatggagtgaatttgtgcaaggcaataaactgaatcatggtgatgtgtgtgacctcatgttaattgacaaaaatgaacttttatttgaagttaagattttccgagcaagagaagctgtggattgcaccttctcaccggatattgatgaagctgatgcacatcacgagcatgatgatgacaatggtgataatgatgctgctcatgacaatcgttcattcacaattatcatacgacagtcttatactactcgtttgccagtgcctgctaagttccacaaaaatgttaataagaagcctgataccgctaacctgagtcttcccggtgggaggagaacttggcctatttcattgaaatatgaggtttcaacagaaagagtcagattccagtccggttggagcaagtttgtacgagacaatcatttgaaagttggagatgcgtgtgaatttgtgttgactgatgaaactagactttcatttgaagttcatatagaagctgctaaatgcaccttgccagatgatgatgaagctgaagatgacggtgatgacagtgatagtgattgtgatgatgaatatccattagcaccacgacttcacaaaagaaagagatcaagttcaagtaccaaaagcaacatcgaagatgtagatggttccactagtaataaacaattcttgaaacgaattcgaaggagcatgagtccaatagggaacaagaaaaaagataatgctcttcagagagctaatgctttcaaatctgtaaaaccttctttcgtggttgcaatgcatcccacttatgtctgtggaggtgttttgaaagttcctacgagttatgtgaagaaatatcagaagaaatatggaaaagagctatcaaaggttgtacatcttaagcttccatgtggtacagaatgggaagtagaagtcacaggtcacaatggtcacttttggttcgagaagggttgggaagatttttccaagttttactccctccagtcacacgactcgttggcttttcaatatgaagcaaattccagattcaaagttaacatctttgataaatcaaaaacagagattgactatcctatcaaaagccctaatatgcaagaaaatggtgtaaatgatcattctccaccggctagtcctccactgcctcaaaagaagaaagaagcaacttcaagtggtggtaattacatagaaattgatcaacctcaatatgcatgtgttaacttggatgcactcctcggctacaggtggaaaagctacagctatgatactagtgatgatgattatagtgatgatgaaggtgatcattctgatgatgacaacgaccacagcgatgaagatgatgaatattcaacagcacaacagcttcacaagagaaagagatcaagttcaagtaccaaaagtagcatcagagatgtcggtgcttggactagttctggacaattcctaaaacgacgacctggtgttccaaggagtatacatccaataagggccacaaaaaatgatatagctcttcaggaagctgaagacttcaagtatgttgaaccacattttgtggttccaatgactcccacaaatgtccgcaaatcttttcttaaacatctcagtgataagcctagtaatgccgagctgcatgttcctggtgggacgacaacttggcgtgttggattgaaatatgaggttgggagaaaaagagccaaatttcagtctggttggaccaagtttgtgagagacaataatttgaacattggagatgagtgtgtgtttgtgttgactgatgaaaatatattttcatttgaagttgtcatagtagctgcaaaatccaccttgccaccagatgatgaatattcaacagcacaacagcttcacaagagaaagagatcaagttcaagtaccaaaagtagcatcagagatgttggtacttcgactagtactggacaatttttaaaacgacgacctggtgttccaaggagtatgcatccaataaggaccacgaaaaatgatatagctcttcagagagctaaagtcttcaagtatgtagaacctcattttgtggttccaatgactgccagaaatgtccacgaatcttttcttaagttgccatctgcttttgtccagaaacatcttgataagaggcctagtcatgtcagcctgtggggttcaaatgacatatattggcctgtcgagttacatttccgcaaaggagctagcttccagggcggttggattgaatttgtgcaacgccataatctgaaagaaggtgatgcatgtggctttgagttgactgagaagagaaagtttctgtttgatgttcacattttccgcaccacatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006950 GO:0008150 GO:0009266 GO:0009409 GO:0009628 GO:0009909 GO:0010048 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043565 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0048580 GO:0048831 GO:0050789 GO:0050793 GO:0050896 GO:0051239 GO:0065007 GO:0070013 GO:0097159 GO:1901363 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

1484

Amino Acids

169.09

Weight (kDa)

8.6

Isoelectric Point (pI)

53.35

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007545)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr2g0103451 RchiOBHm_Chr2g0103461 RchiOBHm_Chr2g0103471 RchiOBHm_Chr2g0103481
rosa_laevigata	RLG00000017237 RLG00000017238 RLG00000017239
rosa_multiflora	Rmu_co8300361.1_g000001 Rmu_co8395735.1_g000001 Rmu_sc0001852.1_g000027 Rmu_sc0011039.1_g000006
rosa_roxburghii	Rroxscaffold_2G00139600 Rroxscaffold_2G00139610 Rroxscaffold_2G00139620
rosa_rugosa	Rorug02G0115000 Rorug02G0115100
rosa_samantha	Rh2AG163400 Rh2AG163500 Rh2AG163600 Rh2BG170500 Rh2BG170600 Rh2BG170700 Rh2DG169000
rosa_wichuraiana	Rw2G012850 Rw2G012860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	102
Acc36I	ACCTGC	1 cut(s)	1216
AccI	GTMKAC	1 cut(s)	3598
AclWI	GGATC	2 cut(s)	859, 1908
AcoI	YGGCCR	4 cut(s)	28, 35, 242, 950
AcuI	CTGAAG	7 cut(s)	414, 1403, 2673, 2837, 3620, 3666, 4118
AcyI	GRCGYC	1 cut(s)	99
AdeI	CACNNNGTG	1 cut(s)	1085
AfiI	CCNNNNNNNGG	3 cut(s)	369, 1807, 2451
AflII	CTTAAG	4 cut(s)	167, 1595, 3005, 4214
AhlI	ACTAGT	5 cut(s)	1217, 2777, 3392, 3551, 4049
AjnI	CCWGG	6 cut(s)	69, 1081, 3580, 3760, 4078, 4335
AjuI	GAANNNNNNNTTGG	2 cut(s)	31, 63
Alw21I	GWGCWC	1 cut(s)	2066
Alw26I	GTCTC	7 cut(s)	90, 829, 1303, 1707, 1920, 2529, 3846
AlwI	GGATC	2 cut(s)	859, 1908
AlwNI	CAGNNNCTG	2 cut(s)	1061, 2387
ApeKI	GCWGC	8 cut(s)	1061, 1283, 1855, 2050, 2321, 2618, 3751, 3935
ArsI	GACNNNNNNTTYG	2 cut(s)	509, 541
Asp700I	GAANNNNTTC	1 cut(s)	4209
AspLEI	GCGC	1 cut(s)	786
AspS9I	GGNCC	7 cut(s)	372, 894, 1239, 1494, 3612, 3837, 4110
AsuC2I	CCSGG	2 cut(s)	17, 2445
AsuII	TTCGAA	1 cut(s)	2806
AsuNHI	GCTAGC	1 cut(s)	4328
AvaII	GGWCC	3 cut(s)	894, 3837, 4110
BalI	TGGCCA	2 cut(s)	244, 952
BauI	CACGAG	1 cut(s)	2288
BbsI	GAAGAC	4 cut(s)	500, 2432, 3654, 4141
Bbv12I	GWGCWC	1 cut(s)	2066
BbvI	GCAGC	8 cut(s)	1048, 1270, 1842, 2062, 2308, 2605, 3738, 3922
BccI	CCATC	9 cut(s)	373, 626, 826, 875, 1474, 1703, 2121, 2762, 4231
BceAI	ACGGC	2 cut(s)	43, 1272
BciT130I	CCWGG	6 cut(s)	71, 1083, 3582, 3762, 4080, 4337
BciVI	GTATCC	1 cut(s)	1797
BclI	TGATCA	4 cut(s)	1828, 3238, 3319, 3424
BcnI	CCSGG	2 cut(s)	17, 2445
BcoDI	GTCTC	7 cut(s)	90, 829, 1303, 1707, 1920, 2529, 3846
BcuI	ACTAGT	5 cut(s)	1217, 2777, 3392, 3551, 4049
BfmI	CTRYAG	2 cut(s)	3364, 3379
BfoI	RGCGCY	1 cut(s)	787
BfrI	CTTAAG	4 cut(s)	167, 1595, 3005, 4214
BfuAI	ACCTGC	1 cut(s)	1216
BfuI	GTATCC	1 cut(s)	1797
BmcAI	AGTACT	2 cut(s)	1942, 4054
Bme1390I	CCNGG	8 cut(s)	17, 71, 1083, 2445, 3582, 3762, 4080, 4337
Bme18I	GGWCC	3 cut(s)	894, 3837, 4110
BmgT120I	GGNCC	7 cut(s)	372, 894, 1239, 1494, 3612, 3837, 4110
BmiI	GGNNCC	6 cut(s)	184, 1260, 1333, 2773, 3681, 4179
BmrFI	CCNGG	8 cut(s)	17, 71, 1083, 2445, 3582, 3762, 4080, 4337
BmtI	GCTAGC	1 cut(s)	4332
BpiI	GAAGAC	4 cut(s)	500, 2432, 3654, 4141
BpmI	CTGGAG	1 cut(s)	3092
Bpu14I	TTCGAA	1 cut(s)	2806
BpuMI	CCSGG	2 cut(s)	17, 2445
BsaBI	GATNNNNATC	3 cut(s)	1272, 2283, 2694
BsaHI	GRCGYC	1 cut(s)	99
BsaJI	CCNNGG	5 cut(s)	1532, 3358, 3590, 4088, 4336
BsaWI	WCCGGW	2 cut(s)	2260, 2513
BsaXI	ACNNNNNCTCC	2 cut(s)	2803, 2833
Bsc4I	CCNNNNNNNGG	3 cut(s)	369, 1807, 2451
Bse118I	RCCGGY	3 cut(s)	33, 1840, 3250
Bse1I	ACTGG	7 cut(s)	511, 953, 1198, 2381, 2509, 3109, 4060
Bse3DI	GCAATG	5 cut(s)	220, 580, 738, 1017, 2907
Bse8I	GATNNNNATC	3 cut(s)	1272, 2283, 2694
BseBI	CCWGG	6 cut(s)	71, 1083, 3582, 3762, 4080, 4337
BseDI	CCNNGG	5 cut(s)	1532, 3358, 3590, 4088, 4336
BseGI	GGATG	8 cut(s)	88, 886, 1989, 2132, 2905, 3355, 3601, 4099
BseJI	GATNNNNATC	3 cut(s)	1272, 2283, 2694
BseLI	CCNNNNNNNGG	3 cut(s)	369, 1807, 2451
BseMI	GCAATG	5 cut(s)	220, 580, 738, 1017, 2907
BseNI	ACTGG	7 cut(s)	511, 953, 1198, 2381, 2509, 3109, 4060
BseRI	GAGGAG	3 cut(s)	1107, 2467, 3347
BseX3I	CGGCCG	1 cut(s)	28
BseXI	GCAGC	8 cut(s)	1048, 1270, 1842, 2062, 2308, 2605, 3738, 3922
BseYI	CCCAGC	2 cut(s)	434, 1491
BsgI	GTGCAG	1 cut(s)	1244
Bsh1285I	CGRYCG	1 cut(s)	31
BsiEI	CGRYCG	1 cut(s)	31
BsiHKAI	GWGCWC	1 cut(s)	2066
BsiSI	CCGG	7 cut(s)	16, 34, 1841, 2261, 2445, 2514, 3251
BslFI	GGGAC	1 cut(s)	3781
BslI	CCNNNNNNNGG	3 cut(s)	369, 1807, 2451
BsmAI	GTCTC	7 cut(s)	90, 829, 1303, 1707, 1920, 2529, 3846
BsmBI	CGTCTC	2 cut(s)	90, 1303
BsmFI	GGGAC	1 cut(s)	3781
BsmI	GAATGC	1 cut(s)	1154
Bsp119I	TTCGAA	1 cut(s)	2806
Bsp1286I	GDGCHC	1 cut(s)	2066
Bsp1407I	TGTACA	2 cut(s)	2017, 2998
BspHI	TCATGA	3 cut(s)	916, 1276, 2326
BspLI	GGNNCC	6 cut(s)	184, 1260, 1333, 2773, 3681, 4179
BspMI	ACCTGC	1 cut(s)	1216
BspOI	GCTAGC	1 cut(s)	4332
BspPI	GGATC	2 cut(s)	859, 1908
BspQI	GCTCTTC	4 cut(s)	1566, 2856, 3639, 4137
BspT104I	TTCGAA	1 cut(s)	2806
BspTI	CTTAAG	4 cut(s)	167, 1595, 3005, 4214
BsrDI	GCAATG	5 cut(s)	220, 580, 738, 1017, 2907
BsrFI	RCCGGY	3 cut(s)	33, 1840, 3250
BsrGI	TGTACA	2 cut(s)	2017, 2998
BsrI	ACTGG	7 cut(s)	511, 953, 1198, 2381, 2509, 3109, 4060
BssAI	RCCGGY	3 cut(s)	33, 1840, 3250
BssECI	CCNNGG	5 cut(s)	1532, 3358, 3590, 4088, 4336
BssNAI	GTATAC	1 cut(s)	3599
BssNI	GRCGYC	1 cut(s)	99
BssSI	CACGAG	1 cut(s)	2288
BssT1I	CCWWGG	3 cut(s)	1532, 3590, 4088
Bst1107I	GTATAC	1 cut(s)	3599
Bst2BI	CACGAG	1 cut(s)	2288
Bst2UI	CCWGG	6 cut(s)	71, 1083, 3582, 3762, 4080, 4337
Bst4CI	ACNGT	7 cut(s)	468, 862, 2026, 2083, 2361, 2663, 2672
Bst6I	CTCTTC	8 cut(s)	1084, 1249, 1519, 1566, 2856, 3639, 4137, 4406
BstACI	GRCGYC	1 cut(s)	99
BstAFI	CTTAAG	4 cut(s)	167, 1595, 3005, 4214
BstAPI	GCANNNNNTGC	1 cut(s)	1061
BstAUI	TGTACA	2 cut(s)	2017, 2998
BstBI	TTCGAA	1 cut(s)	2806
BstC8I	GCNNGC	4 cut(s)	35, 855, 2388, 4330
BstF5I	GGATG	8 cut(s)	88, 886, 1989, 2132, 2905, 3355, 3601, 4099
BstH2I	RGCGCY	1 cut(s)	787
BstHHI	GCGC	1 cut(s)	786
BstMAI	GTCTC	7 cut(s)	90, 829, 1303, 1707, 1920, 2529, 3846
BstMCI	CGRYCG	1 cut(s)	31
BstMWI	GCNNNNNNNGC	6 cut(s)	648, 1058, 1061, 1376, 2237, 4338
BstNI	CCWGG	6 cut(s)	71, 1083, 3582, 3762, 4080, 4337
BstNSI	RCATGY	5 cut(s)	996, 1364, 3339, 3758, 4392
BstSCI	CCNGG	8 cut(s)	15, 69, 1081, 2443, 3580, 3760, 4078, 4335
BstSFI	CTRYAG	2 cut(s)	3364, 3379
BstV1I	GCAGC	8 cut(s)	1048, 1270, 1842, 2062, 2308, 2605, 3738, 3922
BstV2I	GAAGAC	4 cut(s)	500, 2432, 3654, 4141
BstX2I	RGATCY	1 cut(s)	1900
BstYI	RGATCY	1 cut(s)	1900
BstZ17I	GTATAC	1 cut(s)	3599
BstZI	CGGCCG	1 cut(s)	28
BsuI	GTATCC	1 cut(s)	1797
BtgZI	GCGATG	1 cut(s)	3468
BtsCI	GGATG	8 cut(s)	88, 886, 1989, 2132, 2905, 3355, 3601, 4099
BtsI	GCAGTG	1 cut(s)	3263
BtsIMutI	CAGTG	7 cut(s)	149, 651, 2043, 2388, 2677, 3263, 3733
BveI	ACCTGC	1 cut(s)	1216
Cac8I	GCNNGC	4 cut(s)	35, 855, 2388, 4330
CaiI	CAGNNNCTG	2 cut(s)	1061, 2387
CciI	TCATGA	3 cut(s)	916, 1276, 2326
CfoI	GCGC	1 cut(s)	786
Cfr10I	RCCGGY	3 cut(s)	33, 1840, 3250
Cfr13I	GGNCC	7 cut(s)	372, 894, 1239, 1494, 3612, 3837, 4110
CsiI	ACCWGGT	3 cut(s)	1081, 3580, 4078
CspCI	CAANNNNNGTGG	4 cut(s)	334, 369, 1486, 1521
DraI	TTTAAA	2 cut(s)	666, 4068
DraIII	CACNNNGTG	1 cut(s)	1085
EaeI	YGGCCR	4 cut(s)	28, 35, 242, 950
EagI	CGGCCG	1 cut(s)	28
Eam1104I	CTCTTC	8 cut(s)	1084, 1249, 1519, 1566, 2856, 3639, 4137, 4406
EarI	CTCTTC	8 cut(s)	1084, 1249, 1519, 1566, 2856, 3639, 4137, 4406
EclXI	CGGCCG	1 cut(s)	28
Eco130I	CCWWGG	3 cut(s)	1532, 3590, 4088
Eco147I	AGGCCT	1 cut(s)	4258
Eco47I	GGWCC	3 cut(s)	894, 3837, 4110
Eco52I	CGGCCG	1 cut(s)	28
Eco57I	CTGAAG	7 cut(s)	414, 1403, 2673, 2837, 3620, 3666, 4118
EcoO109I	RGGNCCY	1 cut(s)	1239
EcoRI	GAATTC	5 cut(s)	314, 401, 1735, 2033, 2802
EcoRII	CCWGG	6 cut(s)	69, 1081, 3580, 3760, 4078, 4335
EcoT14I	CCWWGG	3 cut(s)	1532, 3590, 4088
EcoT22I	ATGCAT	5 cut(s)	994, 2907, 3337, 4101, 4390
ErhI	CCWWGG	3 cut(s)	1532, 3590, 4088
Esp3I	CGTCTC	2 cut(s)	90, 1303
FalI	AAGNNNNNCTT	6 cut(s)	727, 759, 1228, 1260, 1401, 1433
FaqI	GGGAC	1 cut(s)	3781
FauNDI	CATATG	1 cut(s)	1341
FbaI	TGATCA	4 cut(s)	1828, 3238, 3319, 3424
FblI	GTMKAC	1 cut(s)	3598
FokI	GGATG	8 cut(s)	95, 893, 1996, 2139, 2892, 3362, 3588, 4086
GlaI	GCGC	1 cut(s)	785
GsaI	CCCAGC	2 cut(s)	438, 1495
GsuI	CTGGAG	1 cut(s)	3092
HaeII	RGCGCY	1 cut(s)	787
HapII	CCGG	7 cut(s)	16, 34, 1841, 2261, 2445, 2514, 3251
HhaI	GCGC	1 cut(s)	786
Hin1I	GRCGYC	1 cut(s)	99
Hin6I	GCGC	1 cut(s)	784
HinP1I	GCGC	1 cut(s)	784
HincII	GTYRAC	6 cut(s)	1753, 2577, 3163, 3343, 3894, 4404
HindII	GTYRAC	6 cut(s)	1753, 2577, 3163, 3343, 3894, 4404
HindIII	AAGCTT	3 cut(s)	170, 1598, 3008
HpaI	GTTAAC	3 cut(s)	1753, 3163, 3343
HpaII	CCGG	7 cut(s)	16, 34, 1841, 2261, 2445, 2514, 3251
Hpy99I	CGWCG	3 cut(s)	29, 3579, 4077
HpyCH4III	ACNGT	7 cut(s)	468, 862, 2026, 2083, 2361, 2663, 2672
HpyCH4IV	ACGT	2 cut(s)	99, 321
HpyF10VI	GCNNNNNNNGC	6 cut(s)	648, 1058, 1061, 1376, 2237, 4338
HpySE526I	ACGT	2 cut(s)	99, 321
Hsp92I	GRCGYC	1 cut(s)	99
HspAI	GCGC	1 cut(s)	784
KroI	GCCGGC	1 cut(s)	33
KroNI	GCCGGC	1 cut(s)	35
Ksp22I	TGATCA	4 cut(s)	1828, 3238, 3319, 3424
KspAI	GTTAAC	3 cut(s)	1753, 3163, 3343
LguI	GCTCTTC	4 cut(s)	1566, 2856, 3639, 4137
LmnI	GCTCC	9 cut(s)	188, 394, 1094, 1264, 2012, 2061, 2520, 2811, 4325
Lsp1109I	GCAGC	8 cut(s)	1048, 1270, 1842, 2062, 2308, 2605, 3738, 3922
MabI	ACCWGGT	3 cut(s)	1081, 3580, 4078
MaeII	ACGT	2 cut(s)	99, 321
MfeI	CAATTG	1 cut(s)	902
MflI	RGATCY	1 cut(s)	1900
MhlI	GDGCHC	1 cut(s)	2066
MlsI	TGGCCA	2 cut(s)	244, 952
MluNI	TGGCCA	2 cut(s)	244, 952
MlyI	GAGTC	6 cut(s)	1709, 2446, 2508, 2827, 3113, 3682
MmeI	TCCRAC	7 cut(s)	77, 2065, 2498, 2533, 3766, 3815, 4325
Mox20I	TGGCCA	2 cut(s)	244, 952
Mph1103I	ATGCAT	5 cut(s)	994, 2907, 3337, 4101, 4390
MroNI	GCCGGC	1 cut(s)	33
MroXI	GAANNNNTTC	1 cut(s)	4209
MscI	TGGCCA	2 cut(s)	244, 952
MslI	CAYNNNNRTG	9 cut(s)	466, 1644, 2166, 2292, 2298, 2403, 3432, 3453, 3726
Msp20I	TGGCCA	2 cut(s)	244, 952
MspCI	CTTAAG	4 cut(s)	167, 1595, 3005, 4214
MspI	CCGG	7 cut(s)	16, 34, 1841, 2261, 2445, 2514, 3251
MspR9I	CCNGG	8 cut(s)	17, 71, 1083, 2445, 3582, 3762, 4080, 4337
MunI	CAATTG	1 cut(s)	902
Mva1269I	GAATGC	1 cut(s)	1154
MvaI	CCWGG	6 cut(s)	71, 1083, 3582, 3762, 4080, 4337
MwoI	GCNNNNNNNGC	6 cut(s)	648, 1058, 1061, 1376, 2237, 4338
NaeI	GCCGGC	1 cut(s)	35
NciI	CCSGG	2 cut(s)	17, 2445
NdeI	CATATG	1 cut(s)	1341
NgoMIV	GCCGGC	1 cut(s)	33
NheI	GCTAGC	1 cut(s)	4328
NlaIV	GGNNCC	6 cut(s)	184, 1260, 1333, 2773, 3681, 4179
NmeAIII	GCCGAG	2 cut(s)	3339, 3772
NsiI	ATGCAT	5 cut(s)	994, 2907, 3337, 4101, 4390
NspI	RCATGY	5 cut(s)	996, 1364, 3339, 3758, 4392
NspV	TTCGAA	1 cut(s)	2806
PacI	TTAATTAA	1 cut(s)	1011
PagI	TCATGA	3 cut(s)	916, 1276, 2326
PceI	AGGCCT	1 cut(s)	4258
PciSI	GCTCTTC	4 cut(s)	1566, 2856, 3639, 4137
PcsI	WCGNNNNNNNCGW	1 cut(s)	3450
PctI	GAATGC	1 cut(s)	1154
PdiI	GCCGGC	1 cut(s)	35
PdmI	GAANNNNTTC	1 cut(s)	4209
PleI	GAGTC	6 cut(s)	1708, 2445, 2507, 2826, 3113, 3682
PpsI	GAGTC	6 cut(s)	1708, 2445, 2507, 2826, 3113, 3682
Psp6I	CCWGG	6 cut(s)	69, 1081, 3580, 3760, 4078, 4335
PspFI	CCCAGC	2 cut(s)	434, 1491
PspGI	CCWGG	6 cut(s)	69, 1081, 3580, 3760, 4078, 4335
PspN4I	GGNNCC	6 cut(s)	184, 1260, 1333, 2773, 3681, 4179
PspPI	GGNCC	7 cut(s)	372, 894, 1239, 1494, 3612, 3837, 4110
PstNI	CAGNNNCTG	2 cut(s)	1061, 2387
PsuI	RGATCY	1 cut(s)	1900
RseI	CAYNNNNRTG	9 cut(s)	466, 1644, 2166, 2292, 2298, 2403, 3432, 3453, 3726
SapI	GCTCTTC	4 cut(s)	1566, 2856, 3639, 4137
Sau96I	GGNCC	7 cut(s)	372, 894, 1239, 1494, 3612, 3837, 4110
ScaI	AGTACT	2 cut(s)	1942, 4054
SchI	GAGTC	6 cut(s)	1709, 2446, 2508, 2827, 3113, 3682
ScrFI	CCNGG	8 cut(s)	17, 71, 1083, 2445, 3582, 3762, 4080, 4337
SduI	GDGCHC	1 cut(s)	2066
SexAI	ACCWGGT	3 cut(s)	1081, 3580, 4078
SfcI	CTRYAG	2 cut(s)	3364, 3379
SfuI	TTCGAA	1 cut(s)	2806
SinI	GGWCC	3 cut(s)	894, 3837, 4110
SmiMI	CAYNNNNRTG	9 cut(s)	466, 1644, 2166, 2292, 2298, 2403, 3432, 3453, 3726
SmlI	CTYRAG	4 cut(s)	167, 1595, 3005, 4214
SmoI	CTYRAG	4 cut(s)	167, 1595, 3005, 4214
SpeI	ACTAGT	5 cut(s)	1217, 2777, 3392, 3551, 4049
SseBI	AGGCCT	1 cut(s)	4258
SspI	AATATT	3 cut(s)	1514, 3470, 3968
StuI	AGGCCT	1 cut(s)	4258
StyD4I	CCNGG	8 cut(s)	15, 69, 1081, 2443, 3580, 3760, 4078, 4335
StyI	CCWWGG	3 cut(s)	1532, 3590, 4088
TaaI	ACNGT	7 cut(s)	468, 862, 2026, 2083, 2361, 2663, 2672
TaiI	ACGT	2 cut(s)	102, 324
TaqI	TCGA	8 cut(s)	1659, 1698, 1994, 2757, 2806, 3069, 4046, 4305
TatI	WGTACW	5 cut(s)	1940, 2017, 2040, 2998, 4052
TauI	GCSGC	3 cut(s)	33, 784, 1055
TscAI	CASTG	7 cut(s)	149, 658, 2050, 2388, 2677, 3270, 3733
TseI	GCWGC	8 cut(s)	1061, 1283, 1855, 2050, 2321, 2618, 3751, 3935
TspGWI	ACGGA	1 cut(s)	886
TspRI	CASTG	7 cut(s)	149, 658, 2050, 2388, 2677, 3270, 3733
Vha464I	CTTAAG	4 cut(s)	167, 1595, 3005, 4214
VpaK11BI	GGWCC	3 cut(s)	894, 3837, 4110
XbaI	TCTAGA	2 cut(s)	92, 1739
XceI	RCATGY	5 cut(s)	996, 1364, 3339, 3758, 4392
XmiI	GTMKAC	1 cut(s)	3598
XmnI	GAANNNNTTC	1 cut(s)	4209
ZraI	GACGTC	1 cut(s)	100
ZrmI	AGTACT	2 cut(s)	1942, 4054
Zsp2I	ATGCAT	5 cut(s)	994, 2907, 3337, 4101, 4390

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.