Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0007545

Physical Location & Seq

Genomic Coordinates Forward (+)

77978344 .. 77981730

Gene Structure 3387 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00139610.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1992 bp

ATGACTTCTCTTTGCCGGAAGAAGGATCCTCGACAAAAGTTTTCTCCTACCAAATGCAGTTTACTTAGGTCTATGAAGGAGGACAGTCCCACTACATACCTCAAAATTCCTAGGATTTATTTGAAGAAATGTCGGGAGAAATATGAAAAAGAGCTATCAAAGGTTATACATCTTAAGCTTCCATGTGGTACAGAATGGAAAGTAGAAGTCACAGAACACAAAGGTCACTTTTGGTTCGAGAAGGGTTGGGAAGATTTTTTCAAGTTTTACTCGCTACAGTCCAACGGCTCGATAGATTTTCAATATGAAGGGAATTCCAGATTCAAAGTTAAAATCTATGATAAATCAAAAATAGAGATTGACTATCCTATCAAAAGCACTGATATGCAAGAAAATGGTGTAAATGATCATTCTCCACTGGCTAGTCCTCCACAGCCTCAAAAGAAGAAAGAAGCAACTTCATGCGGTGGGAAAGAGGATCTTTCTGCCAACAAAGATGAGGGAGGCAAGTCTAGTACTACTCAAAGATCCCGAAAACCAACAGCCGAGGTTCCTATGAGGATGGACTCCTCGGCTACAGGTGAAAAAGCTACAGCTCTTCAGAAAGCTAATGAATTCAAGTCCAGAAACCCTTCCTGTTTCTTGGTTACCATGCACTCCTCATATATCAAAGGACATAGGCTCTGGCTGTCAGCTGAGATCTCCAAGAATATGTTGACAAATCTTAGTCAGAATTCTGGTAATGTTAGCCTTCGTGTTTCGGAAGGGAGTACAAGGGAACCTTGGACTGTTGAAATGAAATATGATACTGAAAGAACCACATTCAAATTCCAGAGTGGTTGGAATAAATTTGTTCAAGACAATAAGTTGAATGCCGGTGATGTTTGTGGTTTTATGTTAATTGACGAAATTGGACTTTTATTTGAAGTTAATATTTTCCGCAGAACAGAAGTTGCAACCTCATCACCAGGCATTGATGAAGATGATGTGGATGATAAAGATGACCATGGGCTTCATGATGCCAATGATGACTATGCAGCTGATGAAAACGGGCACCGTTCTTTCAGAAATGTCCTACAGAAGACTGCTATCAGTCATTATTTGTGGTTGTGTTCAACATTTTCTGAGAAACATCTCAGTAAGAAGCCTAGTAATGCTGAGCTGCATGTTCCCGGTGGGAGGACAACATGGCATGTTGGATTGAAATATGATGTTGGACGTAAAGGAGCCAAATTCCAGTCCGGTTGGACCAAGTTTGTGAGAGACAATAATTTGAAAAAGGGAGATGAGTGTGTGTTTGTGTTGACTGATGAAAATAAATTTTCATTTGAAGTTGTCATAATAGCTGCAAAATCCACCTTGCCACCAGACATTGATGATGCTAATGATAACATCAAAGATGATGAGGATGGGAAGAATGAGGATGATACTAGTGATGATGAAGGTGATGATTATGATGATGACAACGACCACAGCGATGAAGATGAAGATGAAGATAATGAATATTCATCAGCACAACAGCTTCACAAGAGAAAGAGATCAAGTTCAAGTACCAAAAGTAGCATCAAAGATGTCGGCGCTTGGACTAGTTCTGGACAATTCTTAAAACGACGACCTGGTGTTCCAAGGAGTATACATCCAATAAGGGCCACGAAAAATGATATAGCTCTTCAGGAAGCTGAAGACTTCAAGTATGTTGAACCACATTTTGTGGTTCCAATGACTCCCAGAAATGTCCGCAAATCTTTTCTTAAGTTGCCATCTGTTTTTGTCGAGAAAAATCTTGATAAGAGGCCTAGTCATGTCAGCCTGTGGGGTTCAAATGACATATATTGGCCTGTCGAGTTACATTTCAGCAAAGGAGCTAGCTTCCAGGGCGGTTGGATTGAATTTGTGCGACACCATAATTTGAAAGAGGGTGATGCTTGTGTCTTTGAGTTGACTGAGAAGAGAAAGTTTCTGTTTGATGTTCACATTTTCCGCACCACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006950 GO:0008150 GO:0009266 GO:0009409 GO:0009628 GO:0009909 GO:0010048 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043565 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0048580 GO:0048831 GO:0050789 GO:0050793 GO:0050896 GO:0051239 GO:0065007 GO:0070013 GO:0097159 GO:1901363 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

663

Amino Acids

75.86

Weight (kDa)

6.37

Isoelectric Point (pI)

46.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B3	PF02362	33 - 115	3e-11	B3 DNA binding domain
B3	PF02362	214 - 315	4e-14	B3 DNA binding domain
B3	PF02362	365 - 448	3.8e-13	B3 DNA binding domain
B3	PF02362	570 - 662	8.2e-14	B3 DNA binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0007545)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr2g0103451 RchiOBHm_Chr2g0103461 RchiOBHm_Chr2g0103471 RchiOBHm_Chr2g0103481
rosa_laevigata	RLG00000017237 RLG00000017238 RLG00000017239
rosa_multiflora	Rmu_co8300361.1_g000001 Rmu_co8395735.1_g000001 Rmu_sc0001852.1_g000027 Rmu_sc0011039.1_g000006
rosa_roxburghii	Rroxscaffold_2G00139600 Rroxscaffold_2G00139610 Rroxscaffold_2G00139620
rosa_rugosa	Rorug02G0115000 Rorug02G0115100
rosa_samantha	Rh2AG163400 Rh2AG163500 Rh2AG163600 Rh2BG170500 Rh2BG170600 Rh2BG170700 Rh2DG169000
rosa_wichuraiana	Rw2G012850 Rw2G012860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1053
AccI	GTMKAC	1 cut(s)	1633
AciI	CCGC	5 cut(s)	465, 940, 1738, 1878, 1981
AclWI	GGATC	4 cut(s)	20, 33, 486, 522
AcsI	RAATTY	9 cut(s)	105, 313, 614, 733, 827, 848, 1232, 1319, 1889
AcuI	CTGAAG	3 cut(s)	584, 1655, 1701
AfaI	GTAC	4 cut(s)	190, 517, 772, 1552
AfiI	CCNNNNNNNGG	2 cut(s)	22, 1179
AflII	CTTAAG	2 cut(s)	173, 1751
AhlI	ACTAGT	2 cut(s)	1430, 1586
AjnI	CCWGG	3 cut(s)	967, 1615, 1872
Alw26I	GTCTC	1 cut(s)	1257
AlwI	GGATC	4 cut(s)	20, 33, 486, 522
AoxI	GGCC	3 cut(s)	1647, 1793, 1835
ApeKI	GCWGC	3 cut(s)	1037, 1162, 1346
ApoI	RAATTY	9 cut(s)	105, 313, 614, 733, 827, 848, 1232, 1319, 1889
Asp700I	GAANNNNTTC	1 cut(s)	631
AspA2I	CCTAGG	1 cut(s)	110
AspLEI	GCGC	1 cut(s)	1580
AspS9I	GGNCC	2 cut(s)	1248, 1647
AsuC2I	CCSGG	1 cut(s)	1173
AsuHPI	GGTGA	5 cut(s)	593, 890, 957, 1457, 1931
AsuNHI	GCTAGC	1 cut(s)	1865
AvaII	GGWCC	1 cut(s)	1248
AvrII	CCTAGG	1 cut(s)	110
BaeGI	GKGCMC	1 cut(s)	1056
BamHI	GGATCC	1 cut(s)	25
BanI	GGYRCC	1 cut(s)	1053
BbsI	GAAGAC	2 cut(s)	1088, 1689
BbvI	GCAGC	3 cut(s)	1049, 1149, 1333
BccI	CCATC	3 cut(s)	556, 1403, 1768
BceAI	ACGGC	1 cut(s)	301
BciT130I	CCWGG	3 cut(s)	969, 1617, 1874
BclI	TGATCA	1 cut(s)	406
BcnI	CCSGG	1 cut(s)	1173
BcoDI	GTCTC	1 cut(s)	1257
BcuI	ACTAGT	2 cut(s)	1430, 1586
BfaI	CTAG	8 cut(s)	111, 423, 513, 1149, 1431, 1587, 1797, 1866
BfmI	CTRYAG	4 cut(s)	275, 576, 591, 1076
BfoI	RGCGCY	1 cut(s)	1581
BfrI	CTTAAG	2 cut(s)	173, 1751
BglII	AGATCT	1 cut(s)	699
BisI	GCNGC	3 cut(s)	1038, 1163, 1347
BlnI	CCTAGG	1 cut(s)	110
BlpI	GCTNAGC	1 cut(s)	1158
BlsI	GCNGC	3 cut(s)	1039, 1164, 1348
BmcAI	AGTACT	1 cut(s)	517
Bme1390I	CCNGG	4 cut(s)	969, 1173, 1617, 1874
Bme18I	GGWCC	1 cut(s)	1248
BmgT120I	GGNCC	2 cut(s)	1248, 1647
BmiI	GGNNCC	6 cut(s)	27, 552, 780, 1055, 1228, 1716
BmrFI	CCNGG	4 cut(s)	969, 1173, 1617, 1874
BmsI	GCATC	4 cut(s)	1009, 1369, 1572, 1912
BmtI	GCTAGC	1 cut(s)	1869
BpiI	GAAGAC	2 cut(s)	1088, 1689
Bpu1102I	GCTNAGC	1 cut(s)	1158
BpuMI	CCSGG	1 cut(s)	1173
BsaJI	CCNNGG	7 cut(s)	110, 546, 570, 782, 1006, 1625, 1873
BsaWI	WCCGGW	1 cut(s)	1241
Bsc4I	CCNNNNNNNGG	2 cut(s)	22, 1179
Bse118I	RCCGGY	1 cut(s)	875
Bse1I	ACTGG	2 cut(s)	423, 1237
BseBI	CCWGG	3 cut(s)	969, 1617, 1874
BseDI	CCNNGG	7 cut(s)	110, 546, 570, 782, 1006, 1625, 1873
BseGI	GGATG	5 cut(s)	567, 997, 1414, 1429, 1636
BseLI	CCNNNNNNNGG	2 cut(s)	22, 1179
BseMII	CTCAG	5 cut(s)	687, 1116, 1149, 1150, 1935
BseNI	ACTGG	2 cut(s)	423, 1237
BseRI	GAGGAG	2 cut(s)	559, 649
BseSI	GKGCMC	1 cut(s)	1056
BseXI	GCAGC	3 cut(s)	1049, 1149, 1333
BshFI	GGCC	3 cut(s)	1649, 1795, 1837
BshNI	GGYRCC	1 cut(s)	1053
BsiSI	CCGG	4 cut(s)	16, 876, 1173, 1242
BslFI	GGGAC	1 cut(s)	72
BslI	CCNNNNNNNGG	2 cut(s)	22, 1179
BsmAI	GTCTC	1 cut(s)	1257
BsmFI	GGGAC	1 cut(s)	72
BsmI	GAATGC	1 cut(s)	877
BsnI	GGCC	3 cut(s)	1649, 1795, 1837
Bsp1286I	GDGCHC	1 cut(s)	1056
Bsp143I	GATC	6 cut(s)	25, 406, 478, 527, 699, 1538
Bsp1720I	GCTNAGC	1 cut(s)	1158
Bsp19I	CCATGG	1 cut(s)	1006
BspACI	CCGC	5 cut(s)	465, 940, 1738, 1878, 1981
BspANI	GGCC	3 cut(s)	1649, 1795, 1837
BspCNI	CTCAG	5 cut(s)	688, 1117, 1149, 1150, 1936
BspHI	TCATGA	1 cut(s)	1015
BspLI	GGNNCC	6 cut(s)	27, 552, 780, 1055, 1228, 1716
BspOI	GCTAGC	1 cut(s)	1869
BspPI	GGATC	4 cut(s)	20, 33, 486, 522
BspQI	GCTCTTC	2 cut(s)	603, 1674
BspT107I	GGYRCC	1 cut(s)	1053
BspTI	CTTAAG	2 cut(s)	173, 1751
BsrFI	RCCGGY	1 cut(s)	875
BsrI	ACTGG	2 cut(s)	423, 1237
BssAI	RCCGGY	1 cut(s)	875
BssECI	CCNNGG	7 cut(s)	110, 546, 570, 782, 1006, 1625, 1873
BssMI	GATC	6 cut(s)	25, 406, 478, 527, 699, 1538
BssNAI	GTATAC	1 cut(s)	1634
BssT1I	CCWWGG	4 cut(s)	110, 782, 1006, 1625
Bst1107I	GTATAC	1 cut(s)	1634
Bst2UI	CCWGG	3 cut(s)	969, 1617, 1874
Bst4CI	ACNGT	4 cut(s)	86, 279, 790, 1058
Bst6I	CTCTTC	3 cut(s)	603, 1674, 1943
BstAFI	CTTAAG	2 cut(s)	173, 1751
BstC8I	GCNNGC	1 cut(s)	1867
BstDEI	CTNAG	7 cut(s)	65, 696, 725, 1125, 1136, 1158, 1944
BstDSI	CCRYGG	1 cut(s)	1006
BstEII	GGTNACC	1 cut(s)	646
BstF5I	GGATG	5 cut(s)	567, 997, 1414, 1429, 1636
BstH2I	RGCGCY	1 cut(s)	1581
BstHHI	GCGC	1 cut(s)	1580
BstKTI	GATC	6 cut(s)	28, 409, 481, 530, 702, 1541
BstMAI	GTCTC	1 cut(s)	1257
BstMBI	GATC	6 cut(s)	25, 406, 478, 527, 699, 1538
BstMWI	GCNNNNNNNGC	1 cut(s)	1875
BstNI	CCWGG	3 cut(s)	969, 1617, 1874
BstNSI	RCATGY	2 cut(s)	1169, 1196
BstPI	GGTNACC	1 cut(s)	646
BstSCI	CCNGG	4 cut(s)	967, 1171, 1615, 1872
BstSFI	CTRYAG	4 cut(s)	275, 576, 591, 1076
BstSLI	GKGCMC	1 cut(s)	1056
BstV1I	GCAGC	3 cut(s)	1049, 1149, 1333
BstV2I	GAAGAC	2 cut(s)	1088, 1689
BstX2I	RGATCY	4 cut(s)	25, 478, 527, 699
BstYI	RGATCY	4 cut(s)	25, 478, 527, 699
BstZ17I	GTATAC	1 cut(s)	1634
BsuRI	GGCC	3 cut(s)	1649, 1795, 1837
BtgI	CCRYGG	1 cut(s)	1006
BtgZI	GCGATG	1 cut(s)	1491
BtsCI	GGATG	5 cut(s)	567, 997, 1414, 1429, 1636
BtsIMutI	CAGTG	2 cut(s)	378, 416
Cac8I	GCNNGC	1 cut(s)	1867
CciI	TCATGA	1 cut(s)	1015
CfoI	GCGC	1 cut(s)	1580
Cfr10I	RCCGGY	1 cut(s)	875
Cfr13I	GGNCC	2 cut(s)	1248, 1647
CsiI	ACCWGGT	1 cut(s)	1615
Csp6I	GTAC	4 cut(s)	189, 516, 771, 1551
CviAII	CATG	9 cut(s)	183, 462, 652, 1007, 1016, 1166, 1188, 1193, 1802
CviQI	GTAC	4 cut(s)	189, 516, 771, 1551
DdeI	CTNAG	7 cut(s)	65, 696, 725, 1125, 1136, 1158, 1944
DpnI	GATC	6 cut(s)	27, 408, 480, 529, 701, 1540
DpnII	GATC	6 cut(s)	25, 406, 478, 527, 699, 1538
Eam1104I	CTCTTC	3 cut(s)	603, 1674, 1943
EarI	CTCTTC	3 cut(s)	603, 1674, 1943
Eco130I	CCWWGG	4 cut(s)	110, 782, 1006, 1625
Eco147I	AGGCCT	1 cut(s)	1795
Eco47I	GGWCC	1 cut(s)	1248
Eco57I	CTGAAG	3 cut(s)	584, 1655, 1701
Eco91I	GGTNACC	1 cut(s)	646
EcoO65I	GGTNACC	1 cut(s)	646
EcoRI	GAATTC	3 cut(s)	313, 614, 733
EcoRII	CCWGG	3 cut(s)	967, 1615, 1872
EcoT14I	CCWWGG	4 cut(s)	110, 782, 1006, 1625
ErhI	CCWWGG	4 cut(s)	110, 782, 1006, 1625
FaeI	CATG	9 cut(s)	186, 465, 655, 1010, 1019, 1169, 1191, 1196, 1805
FalI	AAGNNNNNCTT	4 cut(s)	465, 497, 766, 798
FaqI	GGGAC	1 cut(s)	72
FatI	CATG	9 cut(s)	182, 461, 651, 1006, 1015, 1165, 1187, 1192, 1801
FbaI	TGATCA	1 cut(s)	406
FblI	GTMKAC	1 cut(s)	1633
Fnu4HI	GCNGC	3 cut(s)	1038, 1163, 1347
FokI	GGATG	5 cut(s)	574, 1004, 1421, 1436, 1623
Fsp4HI	GCNGC	3 cut(s)	1038, 1163, 1347
FspBI	CTAG	8 cut(s)	111, 423, 513, 1149, 1431, 1587, 1797, 1866
GlaI	GCGC	1 cut(s)	1579
GluI	GCNGC	3 cut(s)	1038, 1163, 1347
HaeII	RGCGCY	1 cut(s)	1581
HaeIII	GGCC	3 cut(s)	1649, 1795, 1837
HapII	CCGG	4 cut(s)	16, 876, 1173, 1242
HhaI	GCGC	1 cut(s)	1580
Hin1II	CATG	9 cut(s)	186, 465, 655, 1010, 1019, 1169, 1191, 1196, 1805
Hin6I	GCGC	1 cut(s)	1578
HinP1I	GCGC	1 cut(s)	1578
HincII	GTYRAC	3 cut(s)	717, 1305, 1941
HindII	GTYRAC	3 cut(s)	717, 1305, 1941
HindIII	AAGCTT	1 cut(s)	176
HinfI	GANTC	3 cut(s)	321, 566, 1723
HpaII	CCGG	4 cut(s)	16, 876, 1173, 1242
HphI	GGTGA	5 cut(s)	593, 890, 957, 1457, 1931
Hpy166II	GTNNAC	6 cut(s)	62, 717, 1305, 1634, 1941, 1972
Hpy188I	TCNGA	5 cut(s)	603, 732, 763, 1067, 1126
Hpy8I	GTNNAC	6 cut(s)	62, 717, 1305, 1634, 1941, 1972
Hpy99I	CGWCG	1 cut(s)	1614
HpyAV	CCTTC	8 cut(s)	16, 70, 235, 302, 642, 758, 761, 1436
HpyCH4III	ACNGT	4 cut(s)	86, 279, 790, 1058
HpyCH4IV	ACGT	1 cut(s)	1219
HpyCH4V	TGCA	7 cut(s)	57, 388, 655, 956, 1037, 1165, 1349
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1875
HpyF3I	CTNAG	7 cut(s)	65, 696, 725, 1125, 1136, 1158, 1944
HpySE526I	ACGT	1 cut(s)	1219
Hsp92II	CATG	9 cut(s)	186, 465, 655, 1010, 1019, 1169, 1191, 1196, 1805
HspAI	GCGC	1 cut(s)	1578
Ksp22I	TGATCA	1 cut(s)	406
Kzo9I	GATC	6 cut(s)	25, 406, 478, 527, 699, 1538
LguI	GCTCTTC	2 cut(s)	603, 1674
LmnI	GCTCC	2 cut(s)	1226, 1862
Lsp1109I	GCAGC	3 cut(s)	1049, 1149, 1333
LweI	GCATC	4 cut(s)	1009, 1369, 1572, 1912
MabI	ACCWGGT	1 cut(s)	1615
MaeI	CTAG	8 cut(s)	111, 423, 513, 1149, 1431, 1587, 1797, 1866
MaeII	ACGT	1 cut(s)	1219
MaeIII	GTNAC	4 cut(s)	208, 224, 646, 1845
MalI	GATC	6 cut(s)	27, 408, 480, 529, 701, 1540
MboI	GATC	6 cut(s)	25, 406, 478, 527, 699, 1538
MflI	RGATCY	4 cut(s)	25, 478, 527, 699
MhlI	GDGCHC	1 cut(s)	1056
MlyI	GAGTC	2 cut(s)	560, 1717
MmeI	TCCRAC	6 cut(s)	306, 821, 1177, 1195, 1226, 1862
MroXI	GAANNNNTTC	1 cut(s)	631
MseI	TTAA	6 cut(s)	174, 330, 899, 930, 1604, 1752
MslI	CAYNNNNRTG	2 cut(s)	383, 1476
MspA1I	CMGCKG	2 cut(s)	695, 1040
MspCI	CTTAAG	2 cut(s)	173, 1751
MspI	CCGG	4 cut(s)	16, 876, 1173, 1242
MspR9I	CCNGG	4 cut(s)	969, 1173, 1617, 1874
Mva1269I	GAATGC	1 cut(s)	877
MvaI	CCWGG	3 cut(s)	969, 1617, 1874
MwoI	GCNNNNNNNGC	1 cut(s)	1875
NciI	CCSGG	1 cut(s)	1173
NcoI	CCATGG	1 cut(s)	1006
NdeII	GATC	6 cut(s)	25, 406, 478, 527, 699, 1538
NheI	GCTAGC	1 cut(s)	1865
NlaIII	CATG	9 cut(s)	186, 465, 655, 1010, 1019, 1169, 1191, 1196, 1805
NlaIV	GGNNCC	6 cut(s)	27, 552, 780, 1055, 1228, 1716
NmeAIII	GCCGAG	2 cut(s)	551, 571
NmuCI	GTSAC	2 cut(s)	208, 224
NspI	RCATGY	2 cut(s)	1169, 1196
PagI	TCATGA	1 cut(s)	1015
PceI	AGGCCT	1 cut(s)	1795
PciSI	GCTCTTC	2 cut(s)	603, 1674
PcsI	WCGNNNNNNNCGW	1 cut(s)	1473
PctI	GAATGC	1 cut(s)	877
PdmI	GAANNNNTTC	1 cut(s)	631
PfeI	GAWTC	1 cut(s)	321
PkrI	GCNGC	3 cut(s)	1039, 1164, 1348
PleI	GAGTC	2 cut(s)	560, 1717
PpsI	GAGTC	2 cut(s)	560, 1717
Psp6I	CCWGG	3 cut(s)	967, 1615, 1872
PspEI	GGTNACC	1 cut(s)	646
PspGI	CCWGG	3 cut(s)	967, 1615, 1872
PspN4I	GGNNCC	6 cut(s)	27, 552, 780, 1055, 1228, 1716
PspPI	GGNCC	2 cut(s)	1248, 1647
PsuI	RGATCY	4 cut(s)	25, 478, 527, 699
PvuII	CAGCTG	2 cut(s)	695, 1040
RsaI	GTAC	4 cut(s)	190, 517, 772, 1552
RsaNI	GTAC	4 cut(s)	189, 516, 771, 1551
RseI	CAYNNNNRTG	2 cut(s)	383, 1476
SapI	GCTCTTC	2 cut(s)	603, 1674
SaqAI	TTAA	6 cut(s)	174, 330, 899, 930, 1604, 1752
SatI	GCNGC	3 cut(s)	1038, 1163, 1347
Sau3AI	GATC	6 cut(s)	25, 406, 478, 527, 699, 1538
Sau96I	GGNCC	2 cut(s)	1248, 1647
ScaI	AGTACT	1 cut(s)	517
SchI	GAGTC	2 cut(s)	560, 1717
ScrFI	CCNGG	4 cut(s)	969, 1173, 1617, 1874
SduI	GDGCHC	1 cut(s)	1056
SexAI	ACCWGGT	1 cut(s)	1615
SfaNI	GCATC	4 cut(s)	1009, 1369, 1572, 1912
SfcI	CTRYAG	4 cut(s)	275, 576, 591, 1076
SinI	GGWCC	1 cut(s)	1248
SmiMI	CAYNNNNRTG	2 cut(s)	383, 1476
SmlI	CTYRAG	2 cut(s)	173, 1751
SmoI	CTYRAG	2 cut(s)	173, 1751
SpeI	ACTAGT	2 cut(s)	1430, 1586
SseBI	AGGCCT	1 cut(s)	1795
SsiI	CCGC	5 cut(s)	465, 940, 1738, 1878, 1981
SspI	AATATT	2 cut(s)	934, 1505
SspMI	CTAG	8 cut(s)	111, 423, 513, 1149, 1431, 1587, 1797, 1866
StuI	AGGCCT	1 cut(s)	1795
StyD4I	CCNGG	4 cut(s)	967, 1171, 1615, 1872
StyI	CCWWGG	4 cut(s)	110, 782, 1006, 1625
TaaI	ACNGT	4 cut(s)	86, 279, 790, 1058
TaiI	ACGT	1 cut(s)	1222
TaqI	TCGA	5 cut(s)	31, 237, 290, 1773, 1842
TatI	WGTACW	2 cut(s)	515, 770
TfiI	GAWTC	1 cut(s)	321
Tru1I	TTAA	6 cut(s)	174, 330, 899, 930, 1604, 1752
Tru9I	TTAA	6 cut(s)	174, 330, 899, 930, 1604, 1752
TscAI	CASTG	2 cut(s)	385, 423
TseFI	GTSAC	2 cut(s)	208, 224
TseI	GCWGC	3 cut(s)	1037, 1162, 1346
Tsp45I	GTSAC	2 cut(s)	208, 224
TspRI	CASTG	2 cut(s)	385, 423
Vha464I	CTTAAG	2 cut(s)	173, 1751
VpaK11BI	GGWCC	1 cut(s)	1248
XapI	RAATTY	9 cut(s)	105, 313, 614, 733, 827, 848, 1232, 1319, 1889
XceI	RCATGY	2 cut(s)	1169, 1196
XmaJI	CCTAGG	1 cut(s)	110
XmiI	GTMKAC	1 cut(s)	1633
XmnI	GAANNNNTTC	1 cut(s)	631
XspI	CTAG	8 cut(s)	111, 423, 513, 1149, 1431, 1587, 1797, 1866
ZrmI	AGTACT	1 cut(s)	517

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.