B3 domain-containing
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 295 |
| AatII | GACGTC | 1 cut(s) | 229 |
| Acc36I | ACCTGC | 1 cut(s) | 295 |
| AccB1I | GGYRCC | 1 cut(s) | 274 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1189 |
| AciI | CCGC | 4 cut(s) | 94, 148, 1101, 1152 |
| AclWI | GGATC | 2 cut(s) | 117, 1019 |
| AcoI | YGGCCR | 1 cut(s) | 828 |
| AcsI | RAATTY | 3 cut(s) | 295, 508, 582 |
| AcyI | GRCGYC | 1 cut(s) | 226 |
| AfaI | GTAC | 2 cut(s) | 195, 554 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 678, 1189 |
| AflIII | ACRYGT | 1 cut(s) | 26 |
| AgsI | TTSAA | 9 cut(s) | 71, 120, 294, 300, 430, 508, 542, 605, 892 |
| AjnI | CCWGG | 1 cut(s) | 991 |
| AluBI | AGCT | 4 cut(s) | 335, 404, 899, 963 |
| AluI | AGCT | 4 cut(s) | 335, 404, 899, 963 |
| Alw21I | GWGCWC | 1 cut(s) | 742 |
| Alw26I | GTCTC | 3 cut(s) | 614, 673, 978 |
| AlwI | GGATC | 2 cut(s) | 117, 1019 |
| Ama87I | CYCGRG | 2 cut(s) | 981, 1128 |
| AoxI | GGCC | 2 cut(s) | 828, 1191 |
| ApeKI | GCWGC | 2 cut(s) | 896, 963 |
| ApoI | RAATTY | 3 cut(s) | 295, 508, 582 |
| AsuC2I | CCSGG | 1 cut(s) | 398 |
| AsuHPI | GGTGA | 5 cut(s) | 341, 590, 965, 1116, 1166 |
| AvaI | CYCGRG | 2 cut(s) | 981, 1128 |
| AxyI | CCTNAGG | 1 cut(s) | 248 |
| BalI | TGGCCA | 1 cut(s) | 830 |
| BanI | GGYRCC | 1 cut(s) | 274 |
| BbsI | GAAGAC | 1 cut(s) | 963 |
| Bbv12I | GWGCWC | 1 cut(s) | 742 |
| BbvI | GCAGC | 2 cut(s) | 908, 950 |
| BccI | CCATC | 6 cut(s) | 194, 569, 671, 913, 1091, 1142 |
| BciT130I | CCWGG | 1 cut(s) | 993 |
| BcnI | CCSGG | 1 cut(s) | 398 |
| BcoDI | GTCTC | 3 cut(s) | 614, 673, 978 |
| BfaI | CTAG | 1 cut(s) | 753 |
| BfmI | CTRYAG | 1 cut(s) | 687 |
| BfuAI | ACCTGC | 1 cut(s) | 295 |
| BglII | AGATCT | 1 cut(s) | 17 |
| BisI | GCNGC | 3 cut(s) | 95, 897, 964 |
| BlsI | GCNGC | 3 cut(s) | 96, 898, 965 |
| Bme1390I | CCNGG | 2 cut(s) | 398, 993 |
| BmeT110I | CYCGRG | 2 cut(s) | 981, 1128 |
| BmiI | GGNNCC | 1 cut(s) | 276 |
| BmrFI | CCNGG | 2 cut(s) | 398, 993 |
| BmsI | GCATC | 1 cut(s) | 859 |
| BpiI | GAAGAC | 1 cut(s) | 963 |
| BpuMI | CCSGG | 1 cut(s) | 398 |
| BsaAI | YACGTR | 1 cut(s) | 1037 |
| BsaHI | GRCGYC | 1 cut(s) | 226 |
| BsaJI | CCNNGG | 2 cut(s) | 1127, 1194 |
| BsaWI | WCCGGW | 2 cut(s) | 64, 490 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 678, 1189 |
| Bse21I | CCTNAGG | 1 cut(s) | 248 |
| Bse3DI | GCAATG | 2 cut(s) | 84, 914 |
| BseBI | CCWGG | 1 cut(s) | 993 |
| BseDI | CCNNGG | 2 cut(s) | 1127, 1194 |
| BseGI | GGATG | 3 cut(s) | 258, 364, 937 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 678, 1189 |
| BseMI | GCAATG | 2 cut(s) | 84, 914 |
| BseMII | CTCAG | 3 cut(s) | 239, 444, 891 |
| BseRI | GAGGAG | 3 cut(s) | 153, 234, 607 |
| BseXI | GCAGC | 2 cut(s) | 908, 950 |
| BsgI | GTGCAG | 2 cut(s) | 326, 507 |
| BshFI | GGCC | 2 cut(s) | 830, 1193 |
| BshNI | GGYRCC | 1 cut(s) | 274 |
| BsiHKAI | GWGCWC | 1 cut(s) | 742 |
| BsiHKCI | CYCGRG | 2 cut(s) | 981, 1128 |
| BsiSI | CCGG | 3 cut(s) | 65, 398, 491 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 678, 1189 |
| BsmAI | GTCTC | 3 cut(s) | 614, 673, 978 |
| BsmI | GAATGC | 2 cut(s) | 771, 898 |
| BsnI | GGCC | 2 cut(s) | 830, 1193 |
| BsoBI | CYCGRG | 2 cut(s) | 981, 1128 |
| Bsp1286I | GDGCHC | 1 cut(s) | 742 |
| Bsp143I | GATC | 6 cut(s) | 17, 58, 122, 621, 934, 1024 |
| BspACI | CCGC | 4 cut(s) | 94, 148, 1101, 1152 |
| BspANI | GGCC | 2 cut(s) | 830, 1193 |
| BspCNI | CTCAG | 3 cut(s) | 240, 445, 892 |
| BspHI | TCATGA | 1 cut(s) | 646 |
| BspLI | GGNNCC | 1 cut(s) | 276 |
| BspMI | ACCTGC | 1 cut(s) | 295 |
| BspPI | GGATC | 2 cut(s) | 117, 1019 |
| BspT107I | GGYRCC | 1 cut(s) | 274 |
| BsrDI | GCAATG | 2 cut(s) | 84, 914 |
| BssECI | CCNNGG | 2 cut(s) | 1127, 1194 |
| BssMI | GATC | 6 cut(s) | 17, 58, 122, 621, 934, 1024 |
| BssNI | GRCGYC | 1 cut(s) | 226 |
| BssT1I | CCWWGG | 1 cut(s) | 1194 |
| Bst2UI | CCWGG | 1 cut(s) | 993 |
| Bst4CI | ACNGT | 3 cut(s) | 172, 688, 1160 |
| BstACI | GRCGYC | 1 cut(s) | 226 |
| BstBAI | YACGTR | 1 cut(s) | 1037 |
| BstC8I | GCNNGC | 2 cut(s) | 769, 978 |
| BstDEI | CTNAG | 4 cut(s) | 248, 453, 714, 900 |
| BstF5I | GGATG | 3 cut(s) | 258, 364, 937 |
| BstKTI | GATC | 6 cut(s) | 20, 61, 125, 624, 937, 1027 |
| BstMAI | GTCTC | 3 cut(s) | 614, 673, 978 |
| BstMBI | GATC | 6 cut(s) | 17, 58, 122, 621, 934, 1024 |
| BstNI | CCWGG | 1 cut(s) | 993 |
| BstNSI | RCATGY | 1 cut(s) | 30 |
| BstSCI | CCNGG | 2 cut(s) | 396, 991 |
| BstSFI | CTRYAG | 1 cut(s) | 687 |
| BstV1I | GCAGC | 2 cut(s) | 908, 950 |
| BstV2I | GAAGAC | 1 cut(s) | 963 |
| BstX2I | RGATCY | 2 cut(s) | 17, 122 |
| BstYI | RGATCY | 2 cut(s) | 17, 122 |
| Bsu36I | CCTNAGG | 1 cut(s) | 248 |
| BsuRI | GGCC | 2 cut(s) | 830, 1193 |
| BtsCI | GGATG | 3 cut(s) | 258, 364, 937 |
| BtsI | GCAGTG | 3 cut(s) | 504, 556, 1114 |
| BtsIMutI | CAGTG | 5 cut(s) | 168, 504, 556, 1114, 1165 |
| BveI | ACCTGC | 1 cut(s) | 295 |
| Cac8I | GCNNGC | 2 cut(s) | 769, 978 |
| CciI | TCATGA | 1 cut(s) | 646 |
| Csp6I | GTAC | 2 cut(s) | 194, 553 |
| CviAII | CATG | 7 cut(s) | 27, 144, 269, 358, 437, 647, 1200 |
| CviJI | RGCY | 7 cut(s) | 97, 335, 404, 830, 899, 963, 1193 |
| CviKI_1 | RGCY | 7 cut(s) | 97, 335, 404, 830, 899, 963, 1193 |
| CviQI | GTAC | 2 cut(s) | 194, 553 |
| DdeI | CTNAG | 4 cut(s) | 248, 453, 714, 900 |
| DpnI | GATC | 6 cut(s) | 19, 60, 124, 623, 936, 1026 |
| DpnII | GATC | 6 cut(s) | 17, 58, 122, 621, 934, 1024 |
| EaeI | YGGCCR | 1 cut(s) | 828 |
| Eco130I | CCWWGG | 1 cut(s) | 1194 |
| Eco81I | CCTNAGG | 1 cut(s) | 248 |
| Eco88I | CYCGRG | 2 cut(s) | 981, 1128 |
| EcoRI | GAATTC | 1 cut(s) | 508 |
| EcoRII | CCWGG | 1 cut(s) | 991 |
| EcoT14I | CCWWGG | 1 cut(s) | 1194 |
| ErhI | CCWWGG | 1 cut(s) | 1194 |
| FaeI | CATG | 7 cut(s) | 30, 147, 272, 361, 440, 650, 1203 |
| FatI | CATG | 7 cut(s) | 26, 143, 268, 357, 436, 646, 1199 |
| Fnu4HI | GCNGC | 3 cut(s) | 95, 897, 964 |
| FokI | GGATG | 3 cut(s) | 265, 351, 944 |
| Fsp4HI | GCNGC | 3 cut(s) | 95, 897, 964 |
| FspBI | CTAG | 1 cut(s) | 753 |
| GluI | GCNGC | 3 cut(s) | 95, 897, 964 |
| HaeIII | GGCC | 2 cut(s) | 830, 1193 |
| HapII | CCGG | 3 cut(s) | 65, 398, 491 |
| Hin1I | GRCGYC | 1 cut(s) | 226 |
| Hin1II | CATG | 7 cut(s) | 30, 147, 272, 361, 440, 650, 1203 |
| HinfI | GANTC | 3 cut(s) | 698, 748, 794 |
| HpaII | CCGG | 3 cut(s) | 65, 398, 491 |
| HphI | GGTGA | 5 cut(s) | 341, 590, 965, 1116, 1166 |
| Hpy166II | GTNNAC | 2 cut(s) | 175, 1124 |
| Hpy188I | TCNGA | 8 cut(s) | 22, 39, 376, 454, 514, 708, 803, 859 |
| Hpy188III | TCNNGA | 8 cut(s) | 120, 214, 462, 647, 877, 916, 983, 1142 |
| Hpy8I | GTNNAC | 2 cut(s) | 175, 1124 |
| HpyAV | CCTTC | 2 cut(s) | 320, 536 |
| HpyCH4III | ACNGT | 3 cut(s) | 172, 688, 1160 |
| HpyCH4IV | ACGT | 2 cut(s) | 226, 1036 |
| HpyF3I | CTNAG | 4 cut(s) | 248, 453, 714, 900 |
| HpySE526I | ACGT | 2 cut(s) | 226, 1036 |
| Hsp92I | GRCGYC | 1 cut(s) | 226 |
| Hsp92II | CATG | 7 cut(s) | 30, 147, 272, 361, 440, 650, 1203 |
| Kzo9I | GATC | 6 cut(s) | 17, 58, 122, 621, 934, 1024 |
| LmnI | GCTCC | 1 cut(s) | 745 |
| Lsp1109I | GCAGC | 2 cut(s) | 908, 950 |
| LweI | GCATC | 1 cut(s) | 859 |
| MaeI | CTAG | 1 cut(s) | 753 |
| MaeII | ACGT | 2 cut(s) | 226, 1036 |
| MaeIII | GTNAC | 5 cut(s) | 319, 360, 868, 1073, 1154 |
| MalI | GATC | 6 cut(s) | 19, 60, 124, 623, 936, 1026 |
| MboI | GATC | 6 cut(s) | 17, 58, 122, 621, 934, 1024 |
| MboII | GAAGA | 3 cut(s) | 53, 693, 968 |
| MflI | RGATCY | 2 cut(s) | 17, 122 |
| MhlI | GDGCHC | 1 cut(s) | 742 |
| MlsI | TGGCCA | 1 cut(s) | 830 |
| MluCI | AATT | 9 cut(s) | 71, 108, 295, 425, 508, 548, 563, 582, 600 |
| MluNI | TGGCCA | 1 cut(s) | 830 |
| MlyI | GAGTC | 1 cut(s) | 803 |
| MmeI | TCCRAC | 1 cut(s) | 32 |
| Mox20I | TGGCCA | 1 cut(s) | 830 |
| MscI | TGGCCA | 1 cut(s) | 830 |
| MseI | TTAA | 2 cut(s) | 315, 885 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1039, 1082 |
| Msp20I | TGGCCA | 1 cut(s) | 830 |
| MspA1I | CMGCKG | 2 cut(s) | 899, 963 |
| MspI | CCGG | 3 cut(s) | 65, 398, 491 |
| MspR9I | CCNGG | 2 cut(s) | 398, 993 |
| Mva1269I | GAATGC | 2 cut(s) | 771, 898 |
| MvaI | CCWGG | 1 cut(s) | 993 |
| NciI | CCSGG | 1 cut(s) | 398 |
| NdeII | GATC | 6 cut(s) | 17, 58, 122, 621, 934, 1024 |
| NlaIII | CATG | 7 cut(s) | 30, 147, 272, 361, 440, 650, 1203 |
| NlaIV | GGNNCC | 1 cut(s) | 276 |
| NmuCI | GTSAC | 2 cut(s) | 319, 1154 |
| NspI | RCATGY | 1 cut(s) | 30 |
| PaeR7I | CTCGAG | 1 cut(s) | 981 |
| PagI | TCATGA | 1 cut(s) | 646 |
| PaqCI | CACCTGC | 1 cut(s) | 295 |
| PciI | ACATGT | 1 cut(s) | 26 |
| PctI | GAATGC | 2 cut(s) | 771, 898 |
| PfeI | GAWTC | 2 cut(s) | 698, 748 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1189 |
| PkrI | GCNGC | 3 cut(s) | 96, 898, 965 |
| PleI | GAGTC | 1 cut(s) | 802 |
| PpsI | GAGTC | 1 cut(s) | 802 |
| Ppu21I | YACGTR | 1 cut(s) | 1037 |
| PscI | ACATGT | 1 cut(s) | 26 |
| Psp6I | CCWGG | 1 cut(s) | 991 |
| PspGI | CCWGG | 1 cut(s) | 991 |
| PspN4I | GGNNCC | 1 cut(s) | 276 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1036, 1068 |
| PsuI | RGATCY | 2 cut(s) | 17, 122 |
| PvuII | CAGCTG | 2 cut(s) | 899, 963 |
| RsaI | GTAC | 2 cut(s) | 195, 554 |
| RsaNI | GTAC | 2 cut(s) | 194, 553 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1039, 1082 |
| SaqAI | TTAA | 2 cut(s) | 315, 885 |
| SatI | GCNGC | 3 cut(s) | 95, 897, 964 |
| Sau3AI | GATC | 6 cut(s) | 17, 58, 122, 621, 934, 1024 |
| SchI | GAGTC | 1 cut(s) | 803 |
| ScrFI | CCNGG | 2 cut(s) | 398, 993 |
| SduI | GDGCHC | 1 cut(s) | 742 |
| SfaNI | GCATC | 1 cut(s) | 859 |
| SfcI | CTRYAG | 1 cut(s) | 687 |
| Sfr274I | CTCGAG | 1 cut(s) | 981 |
| SlaI | CTCGAG | 1 cut(s) | 981 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1039, 1082 |
| SmlI | CTYRAG | 1 cut(s) | 981 |
| SmoI | CTYRAG | 1 cut(s) | 981 |
| Sse9I | AATT | 9 cut(s) | 71, 108, 295, 425, 508, 548, 563, 582, 600 |
| SsiI | CCGC | 4 cut(s) | 94, 148, 1101, 1152 |
| SspI | AATATT | 2 cut(s) | 942, 1068 |
| SspMI | CTAG | 1 cut(s) | 753 |
| StyD4I | CCNGG | 2 cut(s) | 396, 991 |
| StyI | CCWWGG | 1 cut(s) | 1194 |
| TaaI | ACNGT | 3 cut(s) | 172, 688, 1160 |
| TaiI | ACGT | 2 cut(s) | 229, 1039 |
| TaqI | TCGA | 7 cut(s) | 461, 620, 876, 915, 937, 982, 1089 |
| TasI | AATT | 9 cut(s) | 71, 108, 295, 425, 508, 548, 563, 582, 600 |
| TatI | WGTACW | 1 cut(s) | 193 |
| TauI | GCSGC | 1 cut(s) | 97 |
| TfiI | GAWTC | 2 cut(s) | 698, 748 |
| Tru1I | TTAA | 2 cut(s) | 315, 885 |
| Tru9I | TTAA | 2 cut(s) | 315, 885 |
| TscAI | CASTG | 5 cut(s) | 175, 504, 563, 1114, 1165 |
| TseFI | GTSAC | 2 cut(s) | 319, 1154 |
| TseI | GCWGC | 2 cut(s) | 896, 963 |
| Tsp45I | GTSAC | 2 cut(s) | 319, 1154 |
| TspGWI | ACGGA | 1 cut(s) | 661 |
| TspRI | CASTG | 5 cut(s) | 175, 504, 563, 1114, 1165 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1189 |
| XapI | RAATTY | 3 cut(s) | 295, 508, 582 |
| XceI | RCATGY | 1 cut(s) | 30 |
| XhoI | CTCGAG | 1 cut(s) | 981 |
| XspI | CTAG | 1 cut(s) | 753 |
| ZraI | GACGTC | 1 cut(s) | 227 |