Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr00

Orthogroup ID

OG0000156

Physical Location & Seq

Genomic Coordinates Reverse (-)

3802289 .. 3804604

Gene Structure 2316 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD00G1022100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1410 bp

ATGGCTTCTTTTCACCGGAAAATTCATGACTTCTCTTCAAAAACACATCTTAAAGCTCCCCATTTCCTAGTAGTTATTCCGAAGTCTATTTGTACACAGACCAAACTTAGGATTCCAAACAAATTTTTTAGGAAATATGGAGATGATCTTTCGAATCCAGTATTTCTTAAGCTTCCAACTGGTTCAGAGTGGAAAATAGAACTCAGAATATGGGAGGGTGAGGTCTGGTTCGGCGAGGGTTGGCCAAAGTTCTCGAAGTTTTGCTCTCTAGACTGCTGTCATTCGTTAGTTTTCGGATATGAAGGGAATTCAACATTCCGCGTTAGTGTATTTGACAAGGATTTCACAGAGATCAACTATCCATTGACAATGCCCGAGATGGAAGAAACCGATGAAGATGATGATTCCGACAATAGTTCTTGGGATGATGATGACGACTCTGATTGTGTTGAAGTCTTGGACAACATCATGTCCCGCTCAAGAAAAACAAGGGACAAATATCCATTGTCATGTCCTCAGCCTCGTAAGAAGCACAGAACAAGTTCAACAGCTGAGTTTGCATCCAAAAGACACGGTGAAGGCACGTCCAGCACTCCAAAACGAGCTCAAACAGTTCTTGGGAGGATGCATGCGTCGAATGCAAGAGGAAAAGCTGCTGTAGCTCTTCGGAGAGCTACAGCTTTCAAATCTGACAACCCTTCTTTCATAGTTCCCATGAAGCGCACTTATATCAATGGATATTCTGTGTGGCTGCCTTCAAAATTGTGTATCCACATGAGACGTCTCGGTAAGCATCCTGGTGCCATTACCCTTCGGGTTTTGGATGGGGGAACTTGGTCTGTTGAAATGAAATGTGAAAAGGCAACCAGACCAAAACTCAGACTGCAGTATGGCTGGACTGAATTTGTAAGAGGCAATAATTTGGAAGTTGGTGATGTGTGTGTACTTGTGTTGATAGATGACACTAAACTTGAGTTTGAAGTTGTCATTTTTCGCGCCACAGAAACTGCACATACATTCTCACCACCAGATGTTGACGGGGAACAAACAATGTCCCAAATGGAAGAAACTGATGAAGATGATGATTCCATTGAAATCTTGGACGATTTTCCAACATGCCCGAAAACAAAGAAGAAATCACCAATAGCACCACAGCCTCACAAGAAAAACAGAACATGTTCAGTTAGCACAGCAGAAAACCGCATAAAGAAATTTGGTGGCTCGTCTTTGACTAAAAAAATAATGAACCGAAGAACTCTTCAAGTTCTTAGGAAGATGAACCCAGTTACGGCACATGGTACAAATAGAGCCCTTCAGAGAGCAAAGGCTTTCAAATCTGAATACCCTTCTTGCACAGTTGTTATGAGTCCCTCGTATATCCATGCACATTATGTGGTAAGCTTTTTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006950 GO:0008150 GO:0009266 GO:0009409 GO:0009628 GO:0009909 GO:0010048 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043565 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0048580 GO:0048831 GO:0050789 GO:0050793 GO:0050896 GO:0051239 GO:0065007 GO:0070013 GO:0097159 GO:1901363 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Protein Analysis

470

Amino Acids

53.43

Weight (kDa)

8.97

Isoelectric Point (pI)

48.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B3	PF02362	25 - 113	1.4e-10	B3 DNA binding domain
B3	PF02362	248 - 333	4.7e-13	B3 DNA binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000156)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49475 AT3G18960 AT3G18960 AT3G18960 AT4G01580
fragaria_vesca	FvH4_1g14650 FvH4_1g14650 FvH4_1g14650 FvH4_1g14650 FvH4_1g14660 FvH4_1g14660 FvH4_1g14660 FvH4_1g14660 FvH4_1g14670 FvH4_1g14680 FvH4_1g14680 FvH4_1g14680 FvH4_1g14680 FvH4_1g14680 FvH4_1g14680 FvH4_1g14690 FvH4_1g14700 FvH4_1g29250 FvH4_6g29400 FvH4_6g38681 FvH4_6g38690 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_7g02010
malus_domestica	MD00G1020600.v1.1 MD00G1022000.v1.1 MD00G1022100.v1.1 MD02G1159700.v1.1 MD02G1159800.v1.1 MD02G1159900.v1.1 MD02G1160000.v1.1 MD02G1160300.v1.1 MD15G1274100.v1.1 MD15G1274200.v1.1 MD15G1274400.v1.1 MD15G1302000.v1.1
prunus_persica	Prupe.1G579400_v2.0.a1 Prupe.1G579400_v2.0.a1 Prupe.1G579400_v2.0.a1 Prupe.1G579400_v2.0.a1 Prupe.3G083400_v2.0.a1 Prupe.6G229600_v2.0.a1 Prupe.7G039600_v2.0.a1 Prupe.7G044500_v2.0.a1 Prupe.7G044800_v2.0.a1 Prupe.7G143100_v2.0.a1 Prupe.7G143500_v2.0.a1 Prupe.7G143600_v2.0.a1 Prupe.7G143700_v2.0.a1 Prupe.7G143800_v2.0.a1 Prupe.7G143900_v2.0.a1 Prupe.7G143900_v2.0.a1 Prupe.7G143900_v2.0.a1 Prupe.7G143900_v2.0.a1 Prupe.8G072800_v2.0.a1 Prupe.8G072800_v2.0.a1
pyrus_communis	pycom02g12620 pycom02g12630 pycom15g23750 pycom15g26490 pycom17g21160
rosa_chinensis	RchiOBHm_Chr2g0103421 RchiOBHm_Chr2g0103431 RchiOBHm_Chr2g0103441 RchiOBHm_Chr2g0103491 RchiOBHm_Chr2g0103501 RchiOBHm_Chr2g0103521 RchiOBHm_Chr2g0103541 RchiOBHm_Chr2g0103551 RchiOBHm_Chr2g0103561 RchiOBHm_Chr2g0134821 RchiOBHm_Chr2g0152161 RchiOBHm_Chr2g0152181 RchiOBHm_Chr7g0227261 RchiOBHm_Chr7g0227351 RchiOBHm_Chr7g0227431
rosa_laevigata	RLG00000001649 RLG00000001653 RLG00000001659 RLG00000017235 RLG00000017236 RLG00000017240 RLG00000017241 RLG00000017242 RLG00000017243 RLG00000017244 RLG00000017349 RLG00000019424 RLG00000020614 RLG00000020615
rosa_multiflora	Rmu_co8247875.1_g000001 Rmu_co8429551.1_g000001 Rmu_sc0000173.1_g000009 Rmu_sc0000718.1_g000004 Rmu_sc0001530.1_g000001 Rmu_sc0001530.1_g000002 Rmu_sc0001530.1_g000004 Rmu_sc0001530.1_g000005 Rmu_sc0001852.1_g000023 Rmu_sc0001852.1_g000024 Rmu_sc0002434.1_g000001 Rmu_sc0002434.1_g000002 Rmu_sc0003043.1_g000016 Rmu_sc0003153.1_g000005 Rmu_sc0011039.1_g000001 Rmu_sc0031822.1_g000001
rosa_roxburghii	Rroxscaffold_2G00095860 Rroxscaffold_2G00095870 Rroxscaffold_2G00109720 Rroxscaffold_2G00139530 Rroxscaffold_2G00139550 Rroxscaffold_2G00139570 Rroxscaffold_2G00139580 Rroxscaffold_2G00139630 Rroxscaffold_2G00139640 Rroxscaffold_4G00328430 Rroxscaffold_4G00328440 Rroxscaffold_4G00328450
rosa_rugosa	Rorug02G0114900 Rorug02G0115000 Rorug02G0115000 Rorug02G0115200 Rorug02G0115300 Rorug02G0115400 Rorug02G0115500 Rorug02G0115600 Rorug02G0115600 Rorug02G0115600 Rorug02G0115700 Rorug02G0320300 Rorug02G0431300 Rorug02G0431300 Rorug06G0028200 Rorug07G0241300
rosa_samantha	Rh2AG163200 Rh2AG163300 Rh2AG163700 Rh2AG163800 Rh2AG163900 Rh2AG164000 Rh2AG373400 Rh2AG492600 Rh2BG170300 Rh2BG170400 Rh2BG170800 Rh2BG170900 Rh2BG171000 Rh2BG171100 Rh2BG171200 Rh2BG377800 Rh2BG505000 Rh2BG505100 Rh2BG505200 Rh2CG170300 Rh2CG170700 Rh2CG479000 Rh2DG169100 Rh2DG169200 Rh2DG169300 Rh2DG516400 Rh7AG391200 Rh7BG376200 Rh7CG410200 Rh7CG411500 Rh7CG412000 Rh7CG412700 Rh7DG388800
rosa_wichuraiana	Rw2G012830 Rw2G012840 Rw2G012870 Rw2G012880 Rw2G012890 Rw2G012900 Rw2G030310 Rw2G040470 Rw2G040480 Rw7G032720 Rw7G032730 Rw7G032750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	784
AccB1I	GGYRCC	1 cut(s)	800
AccBSI	CCGCTC	1 cut(s)	477
AccII	CGCG	2 cut(s)	321, 996
AciI	CCGC	3 cut(s)	319, 475, 1201
AcoI	YGGCCR	1 cut(s)	242
AcsI	RAATTY	5 cut(s)	21, 122, 307, 902, 1211
AcuI	CTGAAG	1 cut(s)	1298
AcyI	GRCGYC	1 cut(s)	781
AfaI	GTAC	3 cut(s)	94, 945, 1300
AfiI	CCNNNNNNNGG	2 cut(s)	108, 1288
AflII	CTTAAG	1 cut(s)	167
AflIII	ACRYGT	1 cut(s)	1175
AjiI	CACGTC	1 cut(s)	585
AjnI	CCWGG	1 cut(s)	796
AluBI	AGCT	9 cut(s)	56, 172, 551, 605, 653, 662, 674, 680, 1401
AluI	AGCT	9 cut(s)	56, 172, 551, 605, 653, 662, 674, 680, 1401
Alw21I	GWGCWC	1 cut(s)	607
Alw26I	GTCTC	2 cut(s)	772, 788
AlwNI	CAGNNNCTG	1 cut(s)	1007
Ama87I	CYCGRG	1 cut(s)	374
AoxI	GGCC	1 cut(s)	242
ApeKI	GCWGC	2 cut(s)	653, 751
ApoI	RAATTY	5 cut(s)	21, 122, 307, 902, 1211
Asp700I	GAANNNNTTC	2 cut(s)	541, 1177
AspLEI	GCGC	2 cut(s)	723, 998
AsuHPI	GGTGA	6 cut(s)	5, 230, 587, 944, 1014, 1131
AsuII	TTCGAA	1 cut(s)	152
AvaI	CYCGRG	1 cut(s)	374
BalI	TGGCCA	1 cut(s)	244
BanI	GGYRCC	1 cut(s)	800
BanII	GRGCYC	2 cut(s)	607, 1312
Bbv12I	GWGCWC	1 cut(s)	607
BbvCI	CCTCAGC	1 cut(s)	516
BbvI	GCAGC	2 cut(s)	640, 738
BccI	CCATC	2 cut(s)	373, 818
BceAI	ACGGC	1 cut(s)	1305
BciT130I	CCWGG	1 cut(s)	798
BciVI	GTATCC	1 cut(s)	779
BcoDI	GTCTC	2 cut(s)	772, 788
BfaI	CTAG	2 cut(s)	68, 269
BfmI	CTRYAG	3 cut(s)	657, 675, 884
BfrI	CTTAAG	1 cut(s)	167
BfuI	GTATCC	1 cut(s)	779
BisI	GCNGC	2 cut(s)	654, 752
BlsI	GCNGC	2 cut(s)	655, 753
Bme1390I	CCNGG	1 cut(s)	798
BmeT110I	CYCGRG	1 cut(s)	374
BmgBI	CACGTC	1 cut(s)	585
BmiI	GGNNCC	1 cut(s)	802
BmrFI	CCNGG	1 cut(s)	798
BmrI	ACTGGG	1 cut(s)	1277
BmsI	GCATC	3 cut(s)	569, 615, 802
BmuI	ACTGGG	1 cut(s)	1277
BoxI	GACNNNNGTC	1 cut(s)	276
Bpu10I	CCTNAGC	1 cut(s)	516
Bpu14I	TTCGAA	1 cut(s)	152
BpuEI	CTTGAG	2 cut(s)	463, 992
BsaHI	GRCGYC	1 cut(s)	781
BsaWI	WCCGGW	1 cut(s)	15
Bsc4I	CCNNNNNNNGG	2 cut(s)	108, 1288
Bse1I	ACTGG	3 cut(s)	158, 184, 1283
BseBI	CCWGG	1 cut(s)	798
BseGI	GGATG	5 cut(s)	430, 560, 630, 793, 829
BseLI	CCNNNNNNNGG	2 cut(s)	108, 1288
BseMII	CTCAG	4 cut(s)	217, 530, 543, 892
BseNI	ACTGG	3 cut(s)	158, 184, 1283
BseXI	GCAGC	2 cut(s)	640, 738
BsgI	GTGCAG	1 cut(s)	993
Bsh1236I	CGCG	2 cut(s)	321, 996
BshFI	GGCC	1 cut(s)	244
BshNI	GGYRCC	1 cut(s)	800
BsiHKAI	GWGCWC	1 cut(s)	607
BsiHKCI	CYCGRG	1 cut(s)	374
BsiSI	CCGG	1 cut(s)	16
BslFI	GGGAC	4 cut(s)	457, 506, 1039, 1353
BslI	CCNNNNNNNGG	2 cut(s)	108, 1288
BsmAI	GTCTC	2 cut(s)	772, 788
BsmBI	CGTCTC	2 cut(s)	772, 788
BsmFI	GGGAC	4 cut(s)	457, 506, 1039, 1353
BsmI	GAATGC	1 cut(s)	643
BsnI	GGCC	1 cut(s)	244
BsoBI	CYCGRG	1 cut(s)	374
Bsp119I	TTCGAA	1 cut(s)	152
Bsp1286I	GDGCHC	2 cut(s)	607, 1312
Bsp1407I	TGTACA	1 cut(s)	92
Bsp143I	GATC	2 cut(s)	145, 351
BspACI	CCGC	3 cut(s)	319, 475, 1201
BspANI	GGCC	1 cut(s)	244
BspCNI	CTCAG	4 cut(s)	216, 529, 544, 891
BspFNI	CGCG	2 cut(s)	321, 996
BspHI	TCATGA	1 cut(s)	25
BspLI	GGNNCC	1 cut(s)	802
BspMAI	CTGCAG	1 cut(s)	888
BspQI	GCTCTTC	1 cut(s)	669
BspT104I	TTCGAA	1 cut(s)	152
BspT107I	GGYRCC	1 cut(s)	800
BspTI	CTTAAG	1 cut(s)	167
BsrBI	CCGCTC	1 cut(s)	477
BsrGI	TGTACA	1 cut(s)	92
BsrI	ACTGG	3 cut(s)	158, 184, 1283
BssMI	GATC	2 cut(s)	145, 351
BssNI	GRCGYC	1 cut(s)	781
Bst2UI	CCWGG	1 cut(s)	798
Bst4CI	ACNGT	3 cut(s)	575, 613, 1357
Bst6I	CTCTTC	3 cut(s)	40, 669, 1263
BstACI	GRCGYC	1 cut(s)	781
BstAFI	CTTAAG	1 cut(s)	167
BstAUI	TGTACA	1 cut(s)	92
BstBI	TTCGAA	1 cut(s)	152
BstC8I	GCNNGC	1 cut(s)	630
BstDEI	CTNAG	6 cut(s)	107, 203, 516, 552, 878, 1268
BstF5I	GGATG	5 cut(s)	430, 560, 630, 793, 829
BstFNI	CGCG	2 cut(s)	321, 996
BstHHI	GCGC	2 cut(s)	723, 998
BstKTI	GATC	2 cut(s)	148, 354
BstMAI	GTCTC	2 cut(s)	772, 788
BstMBI	GATC	2 cut(s)	145, 351
BstMWI	GCNNNNNNNGC	4 cut(s)	557, 588, 638, 659
BstNI	CCWGG	1 cut(s)	798
BstNSI	RCATGY	3 cut(s)	632, 1119, 1179
BstPAI	GACNNNNGTC	1 cut(s)	276
BstSCI	CCNGG	1 cut(s)	796
BstSFI	CTRYAG	3 cut(s)	657, 675, 884
BstUI	CGCG	2 cut(s)	321, 996
BstV1I	GCAGC	2 cut(s)	640, 738
BsuI	GTATCC	1 cut(s)	779
BsuRI	GGCC	1 cut(s)	244
BtrI	CACGTC	1 cut(s)	585
BtsCI	GGATG	5 cut(s)	430, 560, 630, 793, 829
Cac8I	GCNNGC	1 cut(s)	630
CaiI	CAGNNNCTG	1 cut(s)	1007
CciI	TCATGA	1 cut(s)	25
CfoI	GCGC	2 cut(s)	723, 998
CseI	GACGC	1 cut(s)	621
Csp6I	GTAC	3 cut(s)	93, 944, 1299
CviQI	GTAC	3 cut(s)	93, 944, 1299
DdeI	CTNAG	6 cut(s)	107, 203, 516, 552, 878, 1268
DpnI	GATC	2 cut(s)	147, 353
DpnII	GATC	2 cut(s)	145, 351
EaeI	YGGCCR	1 cut(s)	242
Eam1104I	CTCTTC	3 cut(s)	40, 669, 1263
EarI	CTCTTC	3 cut(s)	40, 669, 1263
Ecl136II	GAGCTC	1 cut(s)	605
Eco24I	GRGCYC	2 cut(s)	607, 1312
Eco53kI	GAGCTC	1 cut(s)	605
Eco57I	CTGAAG	1 cut(s)	1298
Eco88I	CYCGRG	1 cut(s)	374
EcoICRI	GAGCTC	1 cut(s)	605
EcoRI	GAATTC	1 cut(s)	307
EcoRII	CCWGG	1 cut(s)	796
EcoT22I	ATGCAT	1 cut(s)	630
EcoT38I	GRGCYC	2 cut(s)	607, 1312
Esp3I	CGTCTC	2 cut(s)	772, 788
FaqI	GGGAC	4 cut(s)	457, 506, 1039, 1353
FauI	CCCGC	1 cut(s)	482
Fnu4HI	GCNGC	2 cut(s)	654, 752
FokI	GGATG	5 cut(s)	437, 547, 637, 780, 836
FriOI	GRGCYC	2 cut(s)	607, 1312
Fsp4HI	GCNGC	2 cut(s)	654, 752
FspBI	CTAG	2 cut(s)	68, 269
GlaI	GCGC	2 cut(s)	722, 997
GluI	GCNGC	2 cut(s)	654, 752
HaeIII	GGCC	1 cut(s)	244
HapII	CCGG	1 cut(s)	16
HgaI	GACGC	1 cut(s)	621
HhaI	GCGC	2 cut(s)	723, 998
Hin1I	GRCGYC	1 cut(s)	781
Hin6I	GCGC	2 cut(s)	721, 996
HinP1I	GCGC	2 cut(s)	721, 996
HincII	GTYRAC	1 cut(s)	1036
HindII	GTYRAC	1 cut(s)	1036
HindIII	AAGCTT	2 cut(s)	170, 1399
HinfI	GANTC	6 cut(s)	112, 154, 404, 437, 1085, 1366
HpaII	CCGG	1 cut(s)	16
HphI	GGTGA	6 cut(s)	5, 230, 587, 944, 1014, 1131
Hpy166II	GTNNAC	3 cut(s)	95, 944, 1036
Hpy188III	TCNNGA	4 cut(s)	26, 253, 269, 480
Hpy8I	GTNNAC	3 cut(s)	95, 944, 1036
Hpy99I	CGWCG	1 cut(s)	637
HpyAV	CCTTC	7 cut(s)	296, 572, 708, 765, 821, 1322, 1356
HpyCH4III	ACNGT	3 cut(s)	575, 613, 1357
HpyCH4IV	ACGT	2 cut(s)	584, 781
HpyCH4V	TGCA	7 cut(s)	560, 628, 641, 886, 1010, 1353, 1385
HpyF10VI	GCNNNNNNNGC	4 cut(s)	557, 588, 638, 659
HpyF3I	CTNAG	6 cut(s)	107, 203, 516, 552, 878, 1268
HpySE526I	ACGT	2 cut(s)	584, 781
Hsp92I	GRCGYC	1 cut(s)	781
HspAI	GCGC	2 cut(s)	721, 996
Kzo9I	GATC	2 cut(s)	145, 351
LguI	GCTCTTC	1 cut(s)	669
LmnI	GCTCC	1 cut(s)	61
Lsp1109I	GCAGC	2 cut(s)	640, 738
LweI	GCATC	3 cut(s)	569, 615, 802
MaeI	CTAG	2 cut(s)	68, 269
MaeII	ACGT	2 cut(s)	584, 781
MaeIII	GTNAC	1 cut(s)	1285
MalI	GATC	2 cut(s)	147, 353
MbiI	CCGCTC	1 cut(s)	477
MboI	GATC	2 cut(s)	145, 351
MhlI	GDGCHC	2 cut(s)	607, 1312
MlsI	TGGCCA	1 cut(s)	244
MluCI	AATT	7 cut(s)	21, 122, 307, 761, 902, 919, 1211
MluNI	TGGCCA	1 cut(s)	244
MlyI	GAGTC	2 cut(s)	431, 1375
MmeI	TCCRAC	3 cut(s)	200, 432, 1136
Mox20I	TGGCCA	1 cut(s)	244
Mph1103I	ATGCAT	1 cut(s)	630
MroXI	GAANNNNTTC	2 cut(s)	541, 1177
MscI	TGGCCA	1 cut(s)	244
MseI	TTAA	2 cut(s)	51, 168
MslI	CAYNNNNRTG	2 cut(s)	508, 798
Msp20I	TGGCCA	1 cut(s)	244
MspA1I	CMGCKG	1 cut(s)	551
MspCI	CTTAAG	1 cut(s)	167
MspI	CCGG	1 cut(s)	16
MspR9I	CCNGG	1 cut(s)	798
Mva1269I	GAATGC	1 cut(s)	643
MvaI	CCWGG	1 cut(s)	798
MvnI	CGCG	2 cut(s)	321, 996
MwoI	GCNNNNNNNGC	4 cut(s)	557, 588, 638, 659
NdeII	GATC	2 cut(s)	145, 351
NlaIV	GGNNCC	1 cut(s)	802
NsiI	ATGCAT	1 cut(s)	630
NspI	RCATGY	3 cut(s)	632, 1119, 1179
NspV	TTCGAA	1 cut(s)	152
PaeI	GCATGC	1 cut(s)	632
PagI	TCATGA	1 cut(s)	25
PciI	ACATGT	1 cut(s)	1175
PciSI	GCTCTTC	1 cut(s)	669
PctI	GAATGC	1 cut(s)	643
PdmI	GAANNNNTTC	2 cut(s)	541, 1177
PfeI	GAWTC	4 cut(s)	112, 154, 404, 1085
PkrI	GCNGC	2 cut(s)	655, 753
PleI	GAGTC	2 cut(s)	431, 1374
PpsI	GAGTC	2 cut(s)	431, 1374
PscI	ACATGT	1 cut(s)	1175
PshAI	GACNNNNGTC	1 cut(s)	276
Psp124BI	GAGCTC	1 cut(s)	607
Psp6I	CCWGG	1 cut(s)	796
PspGI	CCWGG	1 cut(s)	796
PspN4I	GGNNCC	1 cut(s)	802
PstI	CTGCAG	1 cut(s)	888
PstNI	CAGNNNCTG	1 cut(s)	1007
PvuII	CAGCTG	1 cut(s)	551
RsaI	GTAC	3 cut(s)	94, 945, 1300
RsaNI	GTAC	3 cut(s)	93, 944, 1299
RseI	CAYNNNNRTG	2 cut(s)	508, 798
SacI	GAGCTC	1 cut(s)	607
SapI	GCTCTTC	1 cut(s)	669
SaqAI	TTAA	2 cut(s)	51, 168
SatI	GCNGC	2 cut(s)	654, 752
Sau3AI	GATC	2 cut(s)	145, 351
SchI	GAGTC	2 cut(s)	431, 1375
ScrFI	CCNGG	1 cut(s)	798
SduI	GDGCHC	2 cut(s)	607, 1312
SfaNI	GCATC	3 cut(s)	569, 615, 802
SfcI	CTRYAG	3 cut(s)	657, 675, 884
SfuI	TTCGAA	1 cut(s)	152
SmiMI	CAYNNNNRTG	2 cut(s)	508, 798
SmlI	CTYRAG	3 cut(s)	167, 478, 971
SmoI	CTYRAG	3 cut(s)	167, 478, 971
SphI	GCATGC	1 cut(s)	632
Sse9I	AATT	7 cut(s)	21, 122, 307, 761, 902, 919, 1211
SsiI	CCGC	3 cut(s)	319, 475, 1201
SspMI	CTAG	2 cut(s)	68, 269
SstI	GAGCTC	1 cut(s)	607
StyD4I	CCNGG	1 cut(s)	796
TaaI	ACNGT	3 cut(s)	575, 613, 1357
TaiI	ACGT	2 cut(s)	587, 784
TaqI	TCGA	3 cut(s)	152, 254, 635
TasI	AATT	7 cut(s)	21, 122, 307, 761, 902, 919, 1211
TatI	WGTACW	2 cut(s)	92, 943
TfiI	GAWTC	4 cut(s)	112, 154, 404, 1085
Tru1I	TTAA	2 cut(s)	51, 168
Tru9I	TTAA	2 cut(s)	51, 168
TseI	GCWGC	2 cut(s)	653, 751
TspDTI	ATGAA	9 cut(s)	14, 315, 408, 694, 731, 863, 1089, 1259, 1292
Vha464I	CTTAAG	1 cut(s)	167
XapI	RAATTY	5 cut(s)	21, 122, 307, 902, 1211
XbaI	TCTAGA	1 cut(s)	268
XceI	RCATGY	3 cut(s)	632, 1119, 1179
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1096
XmnI	GAANNNNTTC	2 cut(s)	541, 1177
XspI	CTAG	2 cut(s)	68, 269
ZraI	GACGTC	1 cut(s)	782
Zsp2I	ATGCAT	1 cut(s)	630

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.