B3 domain-containing
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 1300 |
| AccII | CGCG | 1 cut(s) | 1884 |
| AciI | CCGC | 3 cut(s) | 626, 1340, 1882 |
| AclWI | GGATC | 3 cut(s) | 942, 968, 1178 |
| AcoI | YGGCCR | 3 cut(s) | 14, 221, 1736 |
| AcsI | RAATTY | 5 cut(s) | 101, 236, 286, 761, 1009 |
| AcuI | CTGAAG | 4 cut(s) | 521, 1553, 1697, 2186 |
| AfaI | GTAC | 5 cut(s) | 738, 859, 1176, 2003, 2148 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 692, 983, 2121, 2182 |
| AflIII | ACRYGT | 2 cut(s) | 895, 1319 |
| AjiI | CACGTC | 2 cut(s) | 301, 960 |
| AjnI | CCWGG | 2 cut(s) | 886, 1733 |
| Alw21I | GWGCWC | 1 cut(s) | 1907 |
| Alw26I | GTCTC | 3 cut(s) | 69, 634, 888 |
| AlwI | GGATC | 3 cut(s) | 942, 968, 1178 |
| Ama87I | CYCGRG | 1 cut(s) | 1072 |
| AoxI | GGCC | 6 cut(s) | 14, 221, 1736, 1918, 2123, 2221 |
| ApeKI | GCWGC | 4 cut(s) | 589, 1337, 1690, 2075 |
| ApoI | RAATTY | 5 cut(s) | 101, 236, 286, 761, 1009 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1321, 1397 |
| AspLEI | GCGC | 2 cut(s) | 1886, 2188 |
| AspS9I | GGNCC | 3 cut(s) | 1962, 2123, 2222 |
| AsuC2I | CCSGG | 1 cut(s) | 854 |
| AsuHPI | GGTGA | 3 cut(s) | 209, 1248, 1832 |
| AvaI | CYCGRG | 1 cut(s) | 1072 |
| AvaII | GGWCC | 1 cut(s) | 1962 |
| AxyI | CCTNAGG | 1 cut(s) | 1197 |
| BaeGI | GKGCMC | 1 cut(s) | 1073 |
| BalI | TGGCCA | 1 cut(s) | 1738 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 850, 882 |
| BbsI | GAAGAC | 3 cut(s) | 295, 674, 1035 |
| Bbv12I | GWGCWC | 1 cut(s) | 1907 |
| BbvI | GCAGC | 4 cut(s) | 601, 1349, 1702, 2062 |
| BccI | CCATC | 4 cut(s) | 656, 680, 683, 1718 |
| BceAI | ACGGC | 1 cut(s) | 29 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 962, 996 |
| BciT130I | CCWGG | 2 cut(s) | 888, 1735 |
| BclI | TGATCA | 3 cut(s) | 1135, 1939, 2023 |
| BcnI | CCSGG | 1 cut(s) | 854 |
| BcoDI | GTCTC | 3 cut(s) | 69, 634, 888 |
| BfaI | CTAG | 5 cut(s) | 266, 924, 963, 1266, 1485 |
| BfmI | CTRYAG | 1 cut(s) | 528 |
| BisI | GCNGC | 4 cut(s) | 590, 1338, 1691, 2076 |
| BlsI | GCNGC | 4 cut(s) | 591, 1339, 1692, 2077 |
| Bme1390I | CCNGG | 3 cut(s) | 854, 888, 1735 |
| Bme18I | GGWCC | 1 cut(s) | 1962 |
| BmeT110I | CYCGRG | 1 cut(s) | 1072 |
| BmgBI | CACGTC | 2 cut(s) | 301, 960 |
| BmgT120I | GGNCC | 3 cut(s) | 1962, 2123, 2222 |
| BmiI | GGNNCC | 1 cut(s) | 2124 |
| BmrFI | CCNGG | 3 cut(s) | 854, 888, 1735 |
| BmsI | GCATC | 4 cut(s) | 489, 511, 661, 1747 |
| BpiI | GAAGAC | 3 cut(s) | 295, 674, 1035 |
| BpmI | CTGGAG | 2 cut(s) | 810, 870 |
| BpuMI | CCSGG | 1 cut(s) | 854 |
| BsaBI | GATNNNNATC | 1 cut(s) | 445 |
| BsaJI | CCNNGG | 3 cut(s) | 494, 853, 1921 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 692, 983, 2121, 2182 |
| Bse118I | RCCGGY | 1 cut(s) | 622 |
| Bse1I | ACTGG | 5 cut(s) | 137, 793, 1101, 1739, 2150 |
| Bse21I | CCTNAGG | 1 cut(s) | 1197 |
| Bse8I | GATNNNNATC | 1 cut(s) | 445 |
| BseBI | CCWGG | 2 cut(s) | 888, 1735 |
| BseDI | CCNNGG | 3 cut(s) | 494, 853, 1921 |
| BseGI | GGATG | 7 cut(s) | 409, 502, 504, 672, 1066, 2088, 2129 |
| BseJI | GATNNNNATC | 1 cut(s) | 445 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 692, 983, 2121, 2182 |
| BseMII | CTCAG | 2 cut(s) | 173, 1188 |
| BseNI | ACTGG | 5 cut(s) | 137, 793, 1101, 1739, 2150 |
| BseRI | GAGGAG | 4 cut(s) | 1214, 1897, 1941, 1944 |
| BseSI | GKGCMC | 1 cut(s) | 1073 |
| BseXI | GCAGC | 4 cut(s) | 601, 1349, 1702, 2062 |
| BseYI | CCCAGC | 1 cut(s) | 1360 |
| Bsh1236I | CGCG | 1 cut(s) | 1884 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1236 |
| BshFI | GGCC | 6 cut(s) | 16, 223, 1738, 1920, 2125, 2223 |
| BsiEI | CGRYCG | 1 cut(s) | 1236 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1907 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1072 |
| BsiSI | CCGG | 4 cut(s) | 224, 353, 623, 853 |
| BslFI | GGGAC | 1 cut(s) | 785 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 692, 983, 2121, 2182 |
| BsmAI | GTCTC | 3 cut(s) | 69, 634, 888 |
| BsmFI | GGGAC | 1 cut(s) | 785 |
| BsmI | GAATGC | 3 cut(s) | 998, 1349, 2215 |
| BsnI | GGCC | 6 cut(s) | 16, 223, 1738, 1920, 2125, 2223 |
| BsoBI | CYCGRG | 1 cut(s) | 1072 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1073, 1907 |
| Bsp143I | GATC | 7 cut(s) | 934, 973, 1063, 1135, 1183, 1939, 2023 |
| Bsp19I | CCATGG | 1 cut(s) | 1921 |
| BspACI | CCGC | 3 cut(s) | 626, 1340, 1882 |
| BspANI | GGCC | 6 cut(s) | 16, 223, 1738, 1920, 2125, 2223 |
| BspCNI | CTCAG | 2 cut(s) | 174, 1189 |
| BspFNI | CGCG | 1 cut(s) | 1884 |
| BspLI | GGNNCC | 1 cut(s) | 2124 |
| BspPI | GGATC | 3 cut(s) | 942, 968, 1178 |
| BspQI | GCTCTTC | 2 cut(s) | 540, 1572 |
| BsrFI | RCCGGY | 1 cut(s) | 622 |
| BsrI | ACTGG | 5 cut(s) | 137, 793, 1101, 1739, 2150 |
| BssAI | RCCGGY | 1 cut(s) | 622 |
| BssECI | CCNNGG | 3 cut(s) | 494, 853, 1921 |
| BssMI | GATC | 7 cut(s) | 934, 973, 1063, 1135, 1183, 1939, 2023 |
| BssT1I | CCWWGG | 2 cut(s) | 494, 1921 |
| Bst2UI | CCWGG | 2 cut(s) | 888, 1735 |
| Bst4CI | ACNGT | 2 cut(s) | 1021, 2140 |
| Bst6I | CTCTTC | 3 cut(s) | 117, 540, 1572 |
| BstC8I | GCNNGC | 2 cut(s) | 624, 1918 |
| BstDEI | CTNAG | 2 cut(s) | 182, 1197 |
| BstDSI | CCRYGG | 1 cut(s) | 1921 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2180 |
| BstF5I | GGATG | 7 cut(s) | 409, 502, 504, 672, 1066, 2088, 2129 |
| BstFNI | CGCG | 1 cut(s) | 1884 |
| BstHHI | GCGC | 2 cut(s) | 1886, 2188 |
| BstKTI | GATC | 7 cut(s) | 937, 976, 1066, 1138, 1186, 1942, 2026 |
| BstMAI | GTCTC | 3 cut(s) | 69, 634, 888 |
| BstMBI | GATC | 7 cut(s) | 934, 973, 1063, 1135, 1183, 1939, 2023 |
| BstMCI | CGRYCG | 1 cut(s) | 1236 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 632, 920, 963, 1002, 1485, 1892 |
| BstNI | CCWGG | 2 cut(s) | 888, 1735 |
| BstNSI | RCATGY | 3 cut(s) | 899, 1323, 2147 |
| BstSCI | CCNGG | 3 cut(s) | 852, 886, 1733 |
| BstSFI | CTRYAG | 1 cut(s) | 528 |
| BstSLI | GKGCMC | 1 cut(s) | 1073 |
| BstUI | CGCG | 1 cut(s) | 1884 |
| BstV1I | GCAGC | 4 cut(s) | 601, 1349, 1702, 2062 |
| BstV2I | GAAGAC | 3 cut(s) | 295, 674, 1035 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1197 |
| BsuRI | GGCC | 6 cut(s) | 16, 223, 1738, 1920, 2125, 2223 |
| BtgI | CCRYGG | 1 cut(s) | 1921 |
| BtrI | CACGTC | 2 cut(s) | 301, 960 |
| BtsCI | GGATG | 7 cut(s) | 409, 502, 504, 672, 1066, 2088, 2129 |
| BtsI | GCAGTG | 1 cut(s) | 1003 |
| BtsIMutI | CAGTG | 5 cut(s) | 1003, 1094, 1794, 2145, 2157 |
| Cac8I | GCNNGC | 2 cut(s) | 624, 1918 |
| CfoI | GCGC | 2 cut(s) | 1886, 2188 |
| Cfr10I | RCCGGY | 1 cut(s) | 622 |
| Cfr13I | GGNCC | 3 cut(s) | 1962, 2123, 2222 |
| Csp6I | GTAC | 5 cut(s) | 737, 858, 1175, 2002, 2147 |
| CviQI | GTAC | 5 cut(s) | 737, 858, 1175, 2002, 2147 |
| DdeI | CTNAG | 2 cut(s) | 182, 1197 |
| DpnI | GATC | 7 cut(s) | 936, 975, 1065, 1137, 1185, 1941, 2025 |
| DpnII | GATC | 7 cut(s) | 934, 973, 1063, 1135, 1183, 1939, 2023 |
| EaeI | YGGCCR | 3 cut(s) | 14, 221, 1736 |
| Eam1104I | CTCTTC | 3 cut(s) | 117, 540, 1572 |
| EarI | CTCTTC | 3 cut(s) | 117, 540, 1572 |
| Eco130I | CCWWGG | 2 cut(s) | 494, 1921 |
| Eco47I | GGWCC | 1 cut(s) | 1962 |
| Eco57I | CTGAAG | 4 cut(s) | 521, 1553, 1697, 2186 |
| Eco81I | CCTNAGG | 1 cut(s) | 1197 |
| Eco88I | CYCGRG | 1 cut(s) | 1072 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2180 |
| EcoRI | GAATTC | 1 cut(s) | 286 |
| EcoRII | CCWGG | 2 cut(s) | 886, 1733 |
| EcoT14I | CCWWGG | 2 cut(s) | 494, 1921 |
| EcoT22I | ATGCAT | 2 cut(s) | 504, 654 |
| ErhI | CCWWGG | 2 cut(s) | 494, 1921 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 42, 74, 557, 589 |
| FaqI | GGGAC | 1 cut(s) | 785 |
| FauI | CCCGC | 1 cut(s) | 619 |
| FauNDI | CATATG | 2 cut(s) | 1660, 1967 |
| FbaI | TGATCA | 3 cut(s) | 1135, 1939, 2023 |
| FblI | GTMKAC | 1 cut(s) | 1300 |
| Fnu4HI | GCNGC | 4 cut(s) | 590, 1338, 1691, 2076 |
| FokI | GGATG | 7 cut(s) | 416, 489, 511, 659, 1073, 2075, 2116 |
| Fsp4HI | GCNGC | 4 cut(s) | 590, 1338, 1691, 2076 |
| FspBI | CTAG | 5 cut(s) | 266, 924, 963, 1266, 1485 |
| GlaI | GCGC | 2 cut(s) | 1885, 2187 |
| GluI | GCNGC | 4 cut(s) | 590, 1338, 1691, 2076 |
| GsaI | CCCAGC | 1 cut(s) | 1364 |
| GsuI | CTGGAG | 2 cut(s) | 810, 870 |
| HaeIII | GGCC | 6 cut(s) | 16, 223, 1738, 1920, 2125, 2223 |
| HapII | CCGG | 4 cut(s) | 224, 353, 623, 853 |
| HhaI | GCGC | 2 cut(s) | 1886, 2188 |
| Hin6I | GCGC | 2 cut(s) | 1884, 2186 |
| HinP1I | GCGC | 2 cut(s) | 1884, 2186 |
| HincII | GTYRAC | 2 cut(s) | 334, 1846 |
| HindII | GTYRAC | 2 cut(s) | 334, 1846 |
| HindIII | AAGCTT | 1 cut(s) | 864 |
| HinfI | GANTC | 8 cut(s) | 294, 386, 741, 1163, 1229, 1372, 1412, 2169 |
| HpaI | GTTAAC | 1 cut(s) | 1846 |
| HpaII | CCGG | 4 cut(s) | 224, 353, 623, 853 |
| HphI | GGTGA | 3 cut(s) | 209, 1248, 1832 |
| Hpy166II | GTNNAC | 5 cut(s) | 334, 893, 1301, 1846, 2004 |
| Hpy188III | TCNNGA | 9 cut(s) | 59, 72, 248, 291, 686, 811, 971, 1390, 2069 |
| Hpy8I | GTNNAC | 5 cut(s) | 334, 893, 1301, 1846, 2004 |
| HpyCH4III | ACNGT | 2 cut(s) | 1021, 2140 |
| HpyCH4IV | ACGT | 4 cut(s) | 300, 959, 1447, 1704 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 632, 920, 963, 1002, 1485, 1892 |
| HpyF3I | CTNAG | 2 cut(s) | 182, 1197 |
| HpySE526I | ACGT | 4 cut(s) | 300, 959, 1447, 1704 |
| HspAI | GCGC | 2 cut(s) | 1884, 2186 |
| KroI | GCCGGC | 1 cut(s) | 622 |
| KroNI | GCCGGC | 1 cut(s) | 624 |
| Ksp22I | TGATCA | 3 cut(s) | 1135, 1939, 2023 |
| KspAI | GTTAAC | 1 cut(s) | 1846 |
| Kzo9I | GATC | 7 cut(s) | 934, 973, 1063, 1135, 1183, 1939, 2023 |
| LguI | GCTCTTC | 2 cut(s) | 540, 1572 |
| LmnI | GCTCC | 4 cut(s) | 881, 920, 1910, 1931 |
| Lsp1109I | GCAGC | 4 cut(s) | 601, 1349, 1702, 2062 |
| LweI | GCATC | 4 cut(s) | 489, 511, 661, 1747 |
| MaeI | CTAG | 5 cut(s) | 266, 924, 963, 1266, 1485 |
| MaeII | ACGT | 4 cut(s) | 300, 959, 1447, 1704 |
| MaeIII | GTNAC | 3 cut(s) | 1700, 1741, 2029 |
| MalI | GATC | 7 cut(s) | 936, 975, 1065, 1137, 1185, 1941, 2025 |
| MboI | GATC | 7 cut(s) | 934, 973, 1063, 1135, 1183, 1939, 2023 |
| MfeI | CAATTG | 2 cut(s) | 546, 1935 |
| MhlI | GDGCHC | 2 cut(s) | 1073, 1907 |
| MlsI | TGGCCA | 1 cut(s) | 1738 |
| MluNI | TGGCCA | 1 cut(s) | 1738 |
| MlyI | GAGTC | 4 cut(s) | 395, 1223, 1366, 1406 |
| MmeI | TCCRAC | 5 cut(s) | 738, 1092, 1211, 1453, 2188 |
| Mox20I | TGGCCA | 1 cut(s) | 1738 |
| Mph1103I | ATGCAT | 2 cut(s) | 504, 654 |
| MroNI | GCCGGC | 1 cut(s) | 622 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1321, 1397 |
| MscI | TGGCCA | 1 cut(s) | 1738 |
| MseI | TTAA | 6 cut(s) | 87, 708, 816, 1683, 1845, 2012 |
| MslI | CAYNNNNRTG | 3 cut(s) | 154, 1143, 1294 |
| Msp20I | TGGCCA | 1 cut(s) | 1738 |
| MspA1I | CMGCKG | 1 cut(s) | 1340 |
| MspI | CCGG | 4 cut(s) | 224, 353, 623, 853 |
| MspR9I | CCNGG | 3 cut(s) | 854, 888, 1735 |
| MunI | CAATTG | 2 cut(s) | 546, 1935 |
| Mva1269I | GAATGC | 3 cut(s) | 998, 1349, 2215 |
| MvaI | CCWGG | 2 cut(s) | 888, 1735 |
| MvnI | CGCG | 1 cut(s) | 1884 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 632, 920, 963, 1002, 1485, 1892 |
| NaeI | GCCGGC | 1 cut(s) | 624 |
| NciI | CCSGG | 1 cut(s) | 854 |
| NcoI | CCATGG | 1 cut(s) | 1921 |
| NdeI | CATATG | 2 cut(s) | 1660, 1967 |
| NdeII | GATC | 7 cut(s) | 934, 973, 1063, 1135, 1183, 1939, 2023 |
| NgoMIV | GCCGGC | 1 cut(s) | 622 |
| NlaIV | GGNNCC | 1 cut(s) | 2124 |
| NsiI | ATGCAT | 2 cut(s) | 504, 654 |
| NspI | RCATGY | 3 cut(s) | 899, 1323, 2147 |
| PciI | ACATGT | 2 cut(s) | 895, 1319 |
| PciSI | GCTCTTC | 2 cut(s) | 540, 1572 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 381, 745 |
| PctI | GAATGC | 3 cut(s) | 998, 1349, 2215 |
| PdiI | GCCGGC | 1 cut(s) | 624 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1321, 1397 |
| PfeI | GAWTC | 4 cut(s) | 294, 741, 1163, 2169 |
| PflFI | GACNNNGTC | 1 cut(s) | 1232 |
| PkrI | GCNGC | 4 cut(s) | 591, 1339, 1692, 2077 |
| PleI | GAGTC | 4 cut(s) | 394, 1223, 1366, 1406 |
| PpsI | GAGTC | 4 cut(s) | 394, 1223, 1366, 1406 |
| PscI | ACATGT | 2 cut(s) | 895, 1319 |
| Psp6I | CCWGG | 2 cut(s) | 886, 1733 |
| PspFI | CCCAGC | 1 cut(s) | 1360 |
| PspGI | CCWGG | 2 cut(s) | 886, 1733 |
| PspN4I | GGNNCC | 1 cut(s) | 2124 |
| PspPI | GGNCC | 3 cut(s) | 1962, 2123, 2222 |
| PsyI | GACNNNGTC | 1 cut(s) | 1232 |
| RsaI | GTAC | 5 cut(s) | 738, 859, 1176, 2003, 2148 |
| RsaNI | GTAC | 5 cut(s) | 737, 858, 1175, 2002, 2147 |
| RseI | CAYNNNNRTG | 3 cut(s) | 154, 1143, 1294 |
| SapI | GCTCTTC | 2 cut(s) | 540, 1572 |
| SaqAI | TTAA | 6 cut(s) | 87, 708, 816, 1683, 1845, 2012 |
| SatI | GCNGC | 4 cut(s) | 590, 1338, 1691, 2076 |
| Sau3AI | GATC | 7 cut(s) | 934, 973, 1063, 1135, 1183, 1939, 2023 |
| Sau96I | GGNCC | 3 cut(s) | 1962, 2123, 2222 |
| SchI | GAGTC | 4 cut(s) | 395, 1223, 1366, 1406 |
| ScrFI | CCNGG | 3 cut(s) | 854, 888, 1735 |
| SduI | GDGCHC | 2 cut(s) | 1073, 1907 |
| SfaNI | GCATC | 4 cut(s) | 489, 511, 661, 1747 |
| SfcI | CTRYAG | 1 cut(s) | 528 |
| SinI | GGWCC | 1 cut(s) | 1962 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 154, 1143, 1294 |
| SsiI | CCGC | 3 cut(s) | 626, 1340, 1882 |
| SspI | AATATT | 1 cut(s) | 1497 |
| SspMI | CTAG | 5 cut(s) | 266, 924, 963, 1266, 1485 |
| StyD4I | CCNGG | 3 cut(s) | 852, 886, 1733 |
| StyI | CCWWGG | 2 cut(s) | 494, 1921 |
| TaaI | ACNGT | 2 cut(s) | 1021, 2140 |
| TaiI | ACGT | 4 cut(s) | 303, 962, 1450, 1707 |
| TaqI | TCGA | 6 cut(s) | 71, 312, 1050, 1236, 1325, 1768 |
| TaqII | GACCGA | 1 cut(s) | 1222 |
| TatI | WGTACW | 2 cut(s) | 1174, 2001 |
| TfiI | GAWTC | 4 cut(s) | 294, 741, 1163, 2169 |
| Tru1I | TTAA | 6 cut(s) | 87, 708, 816, 1683, 1845, 2012 |
| Tru9I | TTAA | 6 cut(s) | 87, 708, 816, 1683, 1845, 2012 |
| TscAI | CASTG | 5 cut(s) | 1003, 1101, 1794, 2145, 2157 |
| TseI | GCWGC | 4 cut(s) | 589, 1337, 1690, 2075 |
| TspRI | CASTG | 5 cut(s) | 1003, 1101, 1794, 2145, 2157 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1232 |
| VpaK11BI | GGWCC | 1 cut(s) | 1962 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2180 |
| XapI | RAATTY | 5 cut(s) | 101, 236, 286, 761, 1009 |
| XceI | RCATGY | 3 cut(s) | 899, 1323, 2147 |
| XmiI | GTMKAC | 1 cut(s) | 1300 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1321, 1397 |
| XspI | CTAG | 5 cut(s) | 266, 924, 963, 1266, 1485 |
| Zsp2I | ATGCAT | 2 cut(s) | 504, 654 |