Rmu_sc0000718.1_g000004

B3 domain-containing transcription factor VRN1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000718.1
OG0000156
Physical Location & Seq
Reverse (-)
13591 .. 18091
4501 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000718.1_g000004.1.cds

Sequence Viewer

Length: 1542 bp
atgaaatatggagaagatgtatcaaattcagcttttcttaagcttccaagcggttctgagtgggaagtggaattgacaaggtgcaacggtaaggtttggtttgaaaggggctggccagagttctctaagttctgctctttagactacggtgacttcctagtttttcgatatgaagggaattctatattccaagtttgcatattcgatagaactgccacagaaattgattatcccataacaatgcccgatatggaaaagacggatcatgaagatgaagaagatgataatatatctattgaaatctcggaggattctccaccccacccgaaaacaagggagaaatctccattaccatgccccccatcattcaaaaaaatgagaacaagttggagtggtaaagcagccgacacgatgtttggaaatgatggcggaggctcgtctagtgcacgaagataccagaagggaacagttgaggctattggggagatgcattcactgaataaaagtgaaaaagctcaagctctatggagagttgatgctttcatatctgaaaaccctcacttcaaggtcgtgttgcagccttcatatgtgcaacaaagttatttgggttttccagtgaagtttttcaagagaaatgtaattaaggacgctggtaatgtcacccttcgggtttcaaatggaaaaacttggtccgtcaagttcaaatatgaaaaatcaagggccagactccagcatgtggcagggcatggtagaggtgcaattgaacaagttgaacatagtagaagctcaataattaaagtggaatcagattgcagcatgaattgtgatatgacctctattagtccttctcctcatgaaattggcaagaacaaaaggtcaaaaactagtgggaaggttgctcaaaggcgttgctcatctttaagggttccaagggttaatcttgaagctgccaacaagttcattccaaacaatcccttcttcaaagtctctcttggggcttgtcatatggagaagtcaaatgtgagtgtaccaactagttttatcaggcagttcataaagcgactggagaaacaaacagtgatgcttcaggttaaaaatagattgtggcctgtgaatttgattccttatgcttatagtaatcaacgactatcaaccaaactttgtggcggttggattgcatttgccagggaacatgatttgaaaggaggtgatgtttgtgtatttgagcttatggagatgaaagccaatattaatctcatgaccggccctggttctgtcgtcaggatgttgggtcgagtcttgggccacaacagccataccaacagtactcttggaattgatccagggaaggcgtgggtcttggagcgtttgggtgacggtgcgggcttgtggggctcgaggcattgttggctcatggcggagctcaacggtgcagctcgtgacgaggtagtggaagtactggcttcgtggaggggcttgtgggcggcgctgcacaggcggctgcaggcttggtggagttgtggtatgggcttgtcttgttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
B3

Protein Analysis

513

Amino Acids

57.79

Weight (kDa)

9.08

Isoelectric Point (pI)

43.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000156)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G49475 AT3G18960 AT3G18960 AT3G18960 AT4G01580
fragaria_vesca FvH4_1g14650 FvH4_1g14650 FvH4_1g14650 FvH4_1g14650 FvH4_1g14660 FvH4_1g14660 FvH4_1g14660 FvH4_1g14660 FvH4_1g14670 FvH4_1g14680 FvH4_1g14680 FvH4_1g14680 FvH4_1g14680 FvH4_1g14680 FvH4_1g14680 FvH4_1g14690 FvH4_1g14700 FvH4_1g29250 FvH4_6g29400 FvH4_6g38681 FvH4_6g38690 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_6g38700 FvH4_7g02010
malus_domestica MD00G1020600.v1.1 MD00G1022000.v1.1 MD00G1022100.v1.1 MD02G1159700.v1.1 MD02G1159800.v1.1 MD02G1159900.v1.1 MD02G1160000.v1.1 MD02G1160300.v1.1 MD15G1274100.v1.1 MD15G1274200.v1.1 MD15G1274400.v1.1 MD15G1302000.v1.1
prunus_persica Prupe.1G579400_v2.0.a1 Prupe.1G579400_v2.0.a1 Prupe.1G579400_v2.0.a1 Prupe.1G579400_v2.0.a1 Prupe.3G083400_v2.0.a1 Prupe.6G229600_v2.0.a1 Prupe.7G039600_v2.0.a1 Prupe.7G044500_v2.0.a1 Prupe.7G044800_v2.0.a1 Prupe.7G143100_v2.0.a1 Prupe.7G143500_v2.0.a1 Prupe.7G143600_v2.0.a1 Prupe.7G143700_v2.0.a1 Prupe.7G143800_v2.0.a1 Prupe.7G143900_v2.0.a1 Prupe.7G143900_v2.0.a1 Prupe.7G143900_v2.0.a1 Prupe.7G143900_v2.0.a1 Prupe.8G072800_v2.0.a1 Prupe.8G072800_v2.0.a1
pyrus_communis pycom02g12620 pycom02g12630 pycom15g23750 pycom15g26490 pycom17g21160
rosa_chinensis RchiOBHm_Chr2g0103421 RchiOBHm_Chr2g0103431 RchiOBHm_Chr2g0103441 RchiOBHm_Chr2g0103491 RchiOBHm_Chr2g0103501 RchiOBHm_Chr2g0103521 RchiOBHm_Chr2g0103541 RchiOBHm_Chr2g0103551 RchiOBHm_Chr2g0103561 RchiOBHm_Chr2g0134821 RchiOBHm_Chr2g0152161 RchiOBHm_Chr2g0152181 RchiOBHm_Chr7g0227261 RchiOBHm_Chr7g0227351 RchiOBHm_Chr7g0227431
rosa_laevigata RLG00000001649 RLG00000001653 RLG00000001659 RLG00000017235 RLG00000017236 RLG00000017240 RLG00000017241 RLG00000017242 RLG00000017243 RLG00000017244 RLG00000017349 RLG00000019424 RLG00000020614 RLG00000020615
rosa_multiflora Rmu_co8247875.1_g000001 Rmu_co8429551.1_g000001 Rmu_sc0000173.1_g000009 Rmu_sc0000718.1_g000004 Rmu_sc0001530.1_g000001 Rmu_sc0001530.1_g000002 Rmu_sc0001530.1_g000004 Rmu_sc0001530.1_g000005 Rmu_sc0001852.1_g000023 Rmu_sc0001852.1_g000024 Rmu_sc0002434.1_g000001 Rmu_sc0002434.1_g000002 Rmu_sc0003043.1_g000016 Rmu_sc0003153.1_g000005 Rmu_sc0011039.1_g000001 Rmu_sc0031822.1_g000001
rosa_roxburghii Rroxscaffold_2G00095860 Rroxscaffold_2G00095870 Rroxscaffold_2G00109720 Rroxscaffold_2G00139530 Rroxscaffold_2G00139550 Rroxscaffold_2G00139570 Rroxscaffold_2G00139580 Rroxscaffold_2G00139630 Rroxscaffold_2G00139640 Rroxscaffold_4G00328430 Rroxscaffold_4G00328440 Rroxscaffold_4G00328450
rosa_rugosa Rorug02G0114900 Rorug02G0115000 Rorug02G0115000 Rorug02G0115200 Rorug02G0115300 Rorug02G0115400 Rorug02G0115500 Rorug02G0115600 Rorug02G0115600 Rorug02G0115600 Rorug02G0115700 Rorug02G0320300 Rorug02G0431300 Rorug02G0431300 Rorug06G0028200 Rorug07G0241300
rosa_samantha Rh2AG163200 Rh2AG163300 Rh2AG163700 Rh2AG163800 Rh2AG163900 Rh2AG164000 Rh2AG373400 Rh2AG492600 Rh2BG170300 Rh2BG170400 Rh2BG170800 Rh2BG170900 Rh2BG171000 Rh2BG171100 Rh2BG171200 Rh2BG377800 Rh2BG505000 Rh2BG505100 Rh2BG505200 Rh2CG170300 Rh2CG170700 Rh2CG479000 Rh2DG169100 Rh2DG169200 Rh2DG169300 Rh2DG516400 Rh7AG391200 Rh7BG376200 Rh7CG410200 Rh7CG411500 Rh7CG412000 Rh7CG412700 Rh7DG388800
rosa_wichuraiana Rw2G012830 Rw2G012840 Rw2G012870 Rw2G012880 Rw2G012890 Rw2G012900 Rw2G030310 Rw2G040470 Rw2G040480 Rw7G032720 Rw7G032730 Rw7G032750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 736
AciI CCGC 7 cut(s) 51, 429, 1167, 1382, 1418, 1484, 1498
AclWI GGATC 2 cut(s) 270, 1334
AcoI YGGCCR 1 cut(s) 113
AcsI RAATTY 3 cut(s) 25, 178, 1114
AcuI CTGAAG 1 cut(s) 1070
AfaI GTAC 3 cut(s) 1029, 1327, 1458
AfiI CCNNNNNNNGG 1 cut(s) 736
AflII CTTAAG 1 cut(s) 38
AhlI ACTAGT 2 cut(s) 884, 1034
AjnI CCWGG 3 cut(s) 1184, 1267, 1342
AluBI AGCT 9 cut(s) 32, 43, 515, 521, 786, 947, 1228, 1423, 1436
AluI AGCT 9 cut(s) 32, 43, 515, 521, 786, 947, 1228, 1423, 1436
Alw21I GWGCWC 2 cut(s) 448, 1425
Alw26I GTCTC 1 cut(s) 991
Alw44I GTGCAC 1 cut(s) 444
AlwI GGATC 2 cut(s) 270, 1334
Ama87I CYCGRG 1 cut(s) 1396
AoxI GGCC 5 cut(s) 113, 720, 1106, 1264, 1303
ApaLI GTGCAC 1 cut(s) 444
ApeKI GCWGC 7 cut(s) 401, 577, 813, 947, 1433, 1489, 1501
ApoI RAATTY 3 cut(s) 25, 178, 1114
ArsI GACNNNNNNTTYG 2 cut(s) 398, 430
AseI ATTAAT 1 cut(s) 1251
Asp700I GAANNNNTTC 1 cut(s) 623
AspLEI GCGC 1 cut(s) 1489
AspS9I GGNCC 4 cut(s) 690, 720, 1265, 1303
AsuHPI GGTGA 4 cut(s) 161, 652, 1220, 1385
AvaI CYCGRG 1 cut(s) 1396
AvaII GGWCC 1 cut(s) 690
BaeGI GKGCMC 1 cut(s) 448
BalI TGGCCA 1 cut(s) 115
BanII GRGCYC 2 cut(s) 1397, 1425
BauI CACGAG 1 cut(s) 1437
Bbv12I GWGCWC 2 cut(s) 448, 1425
BbvI GCAGC 7 cut(s) 413, 589, 825, 934, 1445, 1476, 1488
BccI CCATC 2 cut(s) 370, 419
BcgI CGANNNNNNTGC 2 cut(s) 194, 228
BciT130I CCWGG 3 cut(s) 1186, 1269, 1344
BcoDI GTCTC 1 cut(s) 991
BcuI ACTAGT 2 cut(s) 884, 1034
BfaI CTAG 4 cut(s) 158, 441, 885, 1035
BfmI CTRYAG 1 cut(s) 1502
BfoI RGCGCY 1 cut(s) 1490
BfrI CTTAAG 1 cut(s) 38
BisI GCNGC 9 cut(s) 402, 578, 814, 948, 1434, 1485, 1490, 1499, 1502
BlsI GCNGC 9 cut(s) 403, 579, 815, 949, 1435, 1486, 1491, 1500, 1503
BmcAI AGTACT 2 cut(s) 1327, 1458
Bme1390I CCNGG 3 cut(s) 1186, 1269, 1344
Bme18I GGWCC 1 cut(s) 690
BmeT110I CYCGRG 1 cut(s) 1396
BmgT120I GGNCC 4 cut(s) 690, 720, 1265, 1303
BmiI GGNNCC 1 cut(s) 927
BmrFI CCNGG 3 cut(s) 1186, 1269, 1344
BmsI GCATC 3 cut(s) 477, 526, 1071
BpmI CTGGAG 2 cut(s) 713, 1085
BpuEI CTTGAG 1 cut(s) 501
BsaJI CCNNGG 4 cut(s) 929, 1185, 1267, 1343
BsaXI ACNNNNNCTCC 5 cut(s) 33, 1197, 1227, 1507, 1537
Bsc4I CCNNNNNNNGG 1 cut(s) 736
Bse118I RCCGGY 1 cut(s) 1262
Bse1I ACTGG 3 cut(s) 614, 1068, 1464
BseBI CCWGG 3 cut(s) 1186, 1269, 1344
BseDI CCNNGG 4 cut(s) 929, 1185, 1267, 1343
BseGI GGATG 1 cut(s) 1290
BseLI CCNNNNNNNGG 1 cut(s) 736
BseMII CTCAG 1 cut(s) 48
BseNI ACTGG 3 cut(s) 614, 1068, 1464
BseRI GAGGAG 1 cut(s) 840
BseSI GKGCMC 1 cut(s) 448
BseXI GCAGC 7 cut(s) 413, 589, 825, 934, 1445, 1476, 1488
BsgI GTGCAG 2 cut(s) 1452, 1475
BshFI GGCC 5 cut(s) 115, 722, 1108, 1266, 1305
BsiHKAI GWGCWC 2 cut(s) 448, 1425
BsiHKCI CYCGRG 1 cut(s) 1396
BsiSI CCGG 1 cut(s) 1263
BslI CCNNNNNNNGG 1 cut(s) 736
BsmAI GTCTC 1 cut(s) 991
BsmI GAATGC 1 cut(s) 490
BsnI GGCC 5 cut(s) 115, 722, 1108, 1266, 1305
BsoBI CYCGRG 1 cut(s) 1396
Bsp1286I GDGCHC 3 cut(s) 448, 1397, 1425
Bsp143I GATC 2 cut(s) 262, 1339
BspACI CCGC 7 cut(s) 51, 429, 1167, 1382, 1418, 1484, 1498
BspANI GGCC 5 cut(s) 115, 722, 1108, 1266, 1305
BspCNI CTCAG 1 cut(s) 49
BspHI TCATGA 3 cut(s) 265, 853, 1257
BspLI GGNNCC 1 cut(s) 927
BspMAI CTGCAG 1 cut(s) 1506
BspPI GGATC 2 cut(s) 270, 1334
BspTI CTTAAG 1 cut(s) 38
BsrFI RCCGGY 1 cut(s) 1262
BsrI ACTGG 3 cut(s) 614, 1068, 1464
BssAI RCCGGY 1 cut(s) 1262
BssECI CCNNGG 4 cut(s) 929, 1185, 1267, 1343
BssMI GATC 2 cut(s) 262, 1339
BssSI CACGAG 1 cut(s) 1437
BssT1I CCWWGG 1 cut(s) 929
Bst2BI CACGAG 1 cut(s) 1437
Bst2UI CCWGG 3 cut(s) 1186, 1269, 1344
Bst4CI ACNGT 7 cut(s) 89, 149, 469, 1078, 1325, 1379, 1430
BstAFI CTTAAG 1 cut(s) 38
BstC8I GCNNGC 3 cut(s) 113, 1384, 1506
BstDEI CTNAG 2 cut(s) 57, 126
BstF5I GGATG 1 cut(s) 1290
BstH2I RGCGCY 1 cut(s) 1490
BstHHI GCGC 1 cut(s) 1489
BstKTI GATC 2 cut(s) 265, 1342
BstMAI GTCTC 1 cut(s) 991
BstMBI GATC 2 cut(s) 262, 1339
BstMWI GCNNNNNNNGC 5 cut(s) 1311, 1392, 1408, 1495, 1498
BstNI CCWGG 3 cut(s) 1186, 1269, 1344
BstNSI RCATGY 1 cut(s) 737
BstSCI CCNGG 3 cut(s) 1184, 1267, 1342
BstSFI CTRYAG 1 cut(s) 1502
BstSLI GKGCMC 1 cut(s) 448
BstV1I GCAGC 7 cut(s) 413, 589, 825, 934, 1445, 1476, 1488
BsuRI GGCC 5 cut(s) 115, 722, 1108, 1266, 1305
BtsCI GGATG 1 cut(s) 1290
BtsIMutI CAGTG 3 cut(s) 494, 621, 1083
Cac8I GCNNGC 3 cut(s) 113, 1384, 1506
CciI TCATGA 3 cut(s) 265, 853, 1257
CfoI GCGC 1 cut(s) 1489
Cfr10I RCCGGY 1 cut(s) 1262
Cfr13I GGNCC 4 cut(s) 690, 720, 1265, 1303
CseI GACGC 1 cut(s) 656
Csp6I GTAC 3 cut(s) 1028, 1326, 1457
CspCI CAANNNNNGTGG 4 cut(s) 205, 240, 1144, 1179
CviAII CATG 9 cut(s) 266, 354, 734, 746, 817, 854, 1193, 1258, 1414
CviQI GTAC 3 cut(s) 1028, 1326, 1457
DdeI CTNAG 2 cut(s) 57, 126
DpnI GATC 2 cut(s) 264, 1341
DpnII GATC 2 cut(s) 262, 1339
EaeI YGGCCR 1 cut(s) 113
EciI GGCGGA 2 cut(s) 444, 1433
Ecl136II GAGCTC 1 cut(s) 1423
Eco130I CCWWGG 1 cut(s) 929
Eco24I GRGCYC 2 cut(s) 1397, 1425
Eco47I GGWCC 1 cut(s) 690
Eco53kI GAGCTC 1 cut(s) 1423
Eco57I CTGAAG 1 cut(s) 1070
Eco88I CYCGRG 1 cut(s) 1396
EcoICRI GAGCTC 1 cut(s) 1423
EcoRI GAATTC 1 cut(s) 178
EcoRII CCWGG 3 cut(s) 1184, 1267, 1342
EcoT14I CCWWGG 1 cut(s) 929
EcoT22I ATGCAT 1 cut(s) 492
EcoT38I GRGCYC 2 cut(s) 1397, 1425
ErhI CCWWGG 1 cut(s) 929
FaeI CATG 9 cut(s) 269, 357, 737, 749, 820, 857, 1196, 1261, 1417
FalI AAGNNNNNCTT 2 cut(s) 975, 1007
FatI CATG 9 cut(s) 265, 353, 733, 745, 816, 853, 1192, 1257, 1413
FauI CCCGC 1 cut(s) 1375
FauNDI CATATG 2 cut(s) 586, 1005
Fnu4HI GCNGC 9 cut(s) 402, 578, 814, 948, 1434, 1485, 1490, 1499, 1502
FokI GGATG 1 cut(s) 1297
FriOI GRGCYC 2 cut(s) 1397, 1425
Fsp4HI GCNGC 9 cut(s) 402, 578, 814, 948, 1434, 1485, 1490, 1499, 1502
FspBI CTAG 4 cut(s) 158, 441, 885, 1035
GlaI GCGC 1 cut(s) 1488
GluI GCNGC 9 cut(s) 402, 578, 814, 948, 1434, 1485, 1490, 1499, 1502
GsuI CTGGAG 2 cut(s) 713, 1085
HaeII RGCGCY 1 cut(s) 1490
HaeIII GGCC 5 cut(s) 115, 722, 1108, 1266, 1305
HapII CCGG 1 cut(s) 1263
HgaI GACGC 1 cut(s) 656
HhaI GCGC 1 cut(s) 1489
Hin1II CATG 9 cut(s) 269, 357, 737, 749, 820, 857, 1196, 1261, 1417
Hin6I GCGC 1 cut(s) 1487
HinP1I GCGC 1 cut(s) 1487
HindIII AAGCTT 1 cut(s) 41
HinfI GANTC 5 cut(s) 311, 726, 803, 1120, 1296
HpaII CCGG 1 cut(s) 1263
HphI GGTGA 4 cut(s) 161, 652, 1220, 1385
Hpy166II GTNNAC 2 cut(s) 446, 1028
Hpy188I TCNGA 4 cut(s) 58, 307, 550, 808
Hpy188III TCNNGA 7 cut(s) 266, 628, 854, 941, 1258, 1282, 1439
Hpy8I GTNNAC 2 cut(s) 446, 1028
HpyAV CCTTC 8 cut(s) 167, 454, 591, 674, 855, 886, 985, 1342
HpyCH4III ACNGT 7 cut(s) 89, 149, 469, 1078, 1325, 1379, 1430
HpyF10VI GCNNNNNNNGC 5 cut(s) 1311, 1392, 1408, 1495, 1498
HpyF3I CTNAG 2 cut(s) 57, 126
Hsp92II CATG 9 cut(s) 269, 357, 737, 749, 820, 857, 1196, 1261, 1417
HspAI GCGC 1 cut(s) 1487
Kzo9I GATC 2 cut(s) 262, 1339
LmnI GCTCC 2 cut(s) 1363, 1420
Lsp1109I GCAGC 7 cut(s) 413, 589, 825, 934, 1445, 1476, 1488
LweI GCATC 3 cut(s) 477, 526, 1071
MaeI CTAG 4 cut(s) 158, 441, 885, 1035
MaeIII GTNAC 4 cut(s) 149, 658, 1373, 1439
MalI GATC 2 cut(s) 264, 1341
MboI GATC 2 cut(s) 262, 1339
MboII GAAGA 6 cut(s) 26, 281, 287, 290, 462, 970
MfeI CAATTG 1 cut(s) 759
MhlI GDGCHC 3 cut(s) 448, 1397, 1425
MlsI TGGCCA 1 cut(s) 115
MluNI TGGCCA 1 cut(s) 115
MlyI GAGTC 2 cut(s) 720, 1305
MmeI TCCRAC 2 cut(s) 368, 1151
Mox20I TGGCCA 1 cut(s) 115
Mph1103I ATGCAT 1 cut(s) 492
MroXI GAANNNNTTC 1 cut(s) 623
MscI TGGCCA 1 cut(s) 115
MseI TTAA 7 cut(s) 39, 642, 795, 920, 936, 1092, 1251
MslI CAYNNNNRTG 3 cut(s) 239, 270, 352
Msp20I TGGCCA 1 cut(s) 115
MspCI CTTAAG 1 cut(s) 38
MspI CCGG 1 cut(s) 1263
MspR9I CCNGG 3 cut(s) 1186, 1269, 1344
MunI CAATTG 1 cut(s) 759
Mva1269I GAATGC 1 cut(s) 490
MvaI CCWGG 3 cut(s) 1186, 1269, 1344
MwoI GCNNNNNNNGC 5 cut(s) 1311, 1392, 1408, 1495, 1498
NdeI CATATG 2 cut(s) 586, 1005
NdeII GATC 2 cut(s) 262, 1339
NlaIII CATG 9 cut(s) 269, 357, 737, 749, 820, 857, 1196, 1261, 1417
NlaIV GGNNCC 1 cut(s) 927
NmuCI GTSAC 4 cut(s) 149, 658, 1373, 1439
NsiI ATGCAT 1 cut(s) 492
NspI RCATGY 1 cut(s) 737
PaeR7I CTCGAG 1 cut(s) 1396
PagI TCATGA 3 cut(s) 265, 853, 1257
PctI GAATGC 1 cut(s) 490
PdmI GAANNNNTTC 1 cut(s) 623
PfeI GAWTC 3 cut(s) 311, 803, 1120
PflMI CCANNNNNTGG 1 cut(s) 736
PkrI GCNGC 9 cut(s) 403, 579, 815, 949, 1435, 1486, 1491, 1500, 1503
PleI GAGTC 2 cut(s) 720, 1304
PpsI GAGTC 2 cut(s) 720, 1304
PshBI ATTAAT 1 cut(s) 1251
Psp124BI GAGCTC 1 cut(s) 1425
Psp6I CCWGG 3 cut(s) 1184, 1267, 1342
PspGI CCWGG 3 cut(s) 1184, 1267, 1342
PspN4I GGNNCC 1 cut(s) 927
PspPI GGNCC 4 cut(s) 690, 720, 1265, 1303
PspXI VCTCGAGB 1 cut(s) 1396
PstI CTGCAG 1 cut(s) 1506
RsaI GTAC 3 cut(s) 1029, 1327, 1458
RsaNI GTAC 3 cut(s) 1028, 1326, 1457
RseI CAYNNNNRTG 3 cut(s) 239, 270, 352
SacI GAGCTC 1 cut(s) 1425
SaqAI TTAA 7 cut(s) 39, 642, 795, 920, 936, 1092, 1251
SatI GCNGC 9 cut(s) 402, 578, 814, 948, 1434, 1485, 1490, 1499, 1502
Sau3AI GATC 2 cut(s) 262, 1339
Sau96I GGNCC 4 cut(s) 690, 720, 1265, 1303
ScaI AGTACT 2 cut(s) 1327, 1458
SchI GAGTC 2 cut(s) 720, 1305
ScrFI CCNGG 3 cut(s) 1186, 1269, 1344
SduI GDGCHC 3 cut(s) 448, 1397, 1425
SfaNI GCATC 3 cut(s) 477, 526, 1071
SfcI CTRYAG 1 cut(s) 1502
Sfr274I CTCGAG 1 cut(s) 1396
SinI GGWCC 1 cut(s) 690
SlaI CTCGAG 1 cut(s) 1396
SmiMI CAYNNNNRTG 3 cut(s) 239, 270, 352
SmlI CTYRAG 3 cut(s) 38, 516, 1396
SmoI CTYRAG 3 cut(s) 38, 516, 1396
SpeI ACTAGT 2 cut(s) 884, 1034
SsiI CCGC 7 cut(s) 51, 429, 1167, 1382, 1418, 1484, 1498
SspI AATATT 1 cut(s) 1249
SspMI CTAG 4 cut(s) 158, 441, 885, 1035
SstI GAGCTC 1 cut(s) 1425
StyD4I CCNGG 3 cut(s) 1184, 1267, 1342
StyI CCWWGG 1 cut(s) 929
TaaI ACNGT 7 cut(s) 89, 149, 469, 1078, 1325, 1379, 1430
TaqI TCGA 4 cut(s) 166, 204, 1294, 1397
TatI WGTACW 2 cut(s) 1325, 1456
TauI GCSGC 2 cut(s) 1487, 1501
TfiI GAWTC 3 cut(s) 311, 803, 1120
Tru1I TTAA 7 cut(s) 39, 642, 795, 920, 936, 1092, 1251
Tru9I TTAA 7 cut(s) 39, 642, 795, 920, 936, 1092, 1251
TscAI CASTG 3 cut(s) 501, 621, 1083
TseFI GTSAC 4 cut(s) 149, 658, 1373, 1439
TseI GCWGC 7 cut(s) 401, 577, 813, 947, 1433, 1489, 1501
Tsp45I GTSAC 4 cut(s) 149, 658, 1373, 1439
TspGWI ACGGA 2 cut(s) 275, 682
TspRI CASTG 3 cut(s) 501, 621, 1083
Van91I CCANNNNNTGG 1 cut(s) 736
Vha464I CTTAAG 1 cut(s) 38
VneI GTGCAC 1 cut(s) 444
VpaK11BI GGWCC 1 cut(s) 690
VspI ATTAAT 1 cut(s) 1251
XapI RAATTY 3 cut(s) 25, 178, 1114
XceI RCATGY 1 cut(s) 737
XcmI CCANNNNNNNNNTGG 1 cut(s) 1350
XhoI CTCGAG 1 cut(s) 1396
XmnI GAANNNNTTC 1 cut(s) 623
XspI CTAG 4 cut(s) 158, 441, 885, 1035
ZrmI AGTACT 2 cut(s) 1327, 1458
Zsp2I ATGCAT 1 cut(s) 492
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.