B3 domain-containing
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| ArfGap | PF01412 | 11 - 115 | 3.7e-36 | Putative GTPase activating protein for Arf |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 377 |
| AccII | CGCG | 2 cut(s) | 89, 255 |
| AciI | CCGC | 3 cut(s) | 821, 939, 1076 |
| AclWI | GGATC | 2 cut(s) | 131, 1200 |
| AcoI | YGGCCR | 2 cut(s) | 147, 784 |
| AcsI | RAATTY | 4 cut(s) | 196, 760, 882, 911 |
| AcuI | CTGAAG | 4 cut(s) | 93, 522, 672, 1181 |
| AcyI | GRCGYC | 1 cut(s) | 5 |
| AfaI | GTAC | 1 cut(s) | 547 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 103 |
| AgsI | TTSAA | 5 cut(s) | 19, 40, 746, 864, 1132 |
| AhlI | ACTAGT | 1 cut(s) | 857 |
| AjnI | CCWGG | 1 cut(s) | 206 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 91, 123 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 648, 680 |
| AluBI | AGCT | 8 cut(s) | 46, 180, 223, 326, 701, 740, 1162, 1167 |
| AluI | AGCT | 8 cut(s) | 46, 180, 223, 326, 701, 740, 1162, 1167 |
| Alw21I | GWGCWC | 1 cut(s) | 604 |
| Alw26I | GTCTC | 3 cut(s) | 167, 417, 1142 |
| AlwI | GGATC | 2 cut(s) | 131, 1200 |
| AoxI | GGCC | 4 cut(s) | 147, 306, 522, 784 |
| ApeKI | GCWGC | 2 cut(s) | 326, 1016 |
| ApoI | RAATTY | 4 cut(s) | 196, 760, 882, 911 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 741, 859, 911 |
| AspLEI | GCGC | 2 cut(s) | 257, 773 |
| AspS9I | GGNCC | 1 cut(s) | 523 |
| AsuC2I | CCSGG | 1 cut(s) | 1153 |
| AsuHPI | GGTGA | 4 cut(s) | 393, 965, 1055, 1091 |
| BalI | TGGCCA | 1 cut(s) | 786 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 726, 758 |
| BauI | CACGAG | 1 cut(s) | 321 |
| BbsI | GAAGAC | 2 cut(s) | 383, 387 |
| Bbv12I | GWGCWC | 1 cut(s) | 604 |
| BbvI | GCAGC | 2 cut(s) | 313, 1003 |
| BccI | CCATC | 5 cut(s) | 162, 276, 284, 406, 1028 |
| BceAI | ACGGC | 1 cut(s) | 134 |
| BciT130I | CCWGG | 1 cut(s) | 208 |
| BclI | TGATCA | 2 cut(s) | 640, 955 |
| BcnI | CCSGG | 1 cut(s) | 1153 |
| BcoDI | GTCTC | 3 cut(s) | 167, 417, 1142 |
| BcuI | ACTAGT | 1 cut(s) | 857 |
| BfaI | CTAG | 2 cut(s) | 774, 858 |
| BfmI | CTRYAG | 1 cut(s) | 480 |
| BfoI | RGCGCY | 1 cut(s) | 774 |
| BfuAI | ACCTGC | 1 cut(s) | 377 |
| BglII | AGATCT | 1 cut(s) | 188 |
| BisI | GCNGC | 2 cut(s) | 327, 1017 |
| BlpI | GCTNAGC | 1 cut(s) | 1163 |
| BlsI | GCNGC | 2 cut(s) | 328, 1018 |
| Bme1390I | CCNGG | 2 cut(s) | 208, 1153 |
| BmgT120I | GGNCC | 1 cut(s) | 523 |
| BmiI | GGNNCC | 1 cut(s) | 525 |
| BmrFI | CCNGG | 2 cut(s) | 208, 1153 |
| BmrI | ACTGGG | 3 cut(s) | 588, 597, 662 |
| BmsI | GCATC | 4 cut(s) | 144, 437, 970, 1184 |
| BmuI | ACTGGG | 3 cut(s) | 588, 597, 662 |
| BoxI | GACNNNNGTC | 1 cut(s) | 387 |
| BpiI | GAAGAC | 2 cut(s) | 383, 387 |
| BpmI | CTGGAG | 1 cut(s) | 1009 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1163 |
| BpuEI | CTTGAG | 1 cut(s) | 969 |
| BpuMI | CCSGG | 1 cut(s) | 1153 |
| Bsa29I | ATCGAT | 1 cut(s) | 138 |
| BsaHI | GRCGYC | 1 cut(s) | 5 |
| BsaI | GGTCTC | 1 cut(s) | 1142 |
| BsaJI | CCNNGG | 3 cut(s) | 519, 562, 1170 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 103 |
| Bse1I | ACTGG | 8 cut(s) | 456, 543, 583, 592, 659, 668, 787, 1026 |
| BseBI | CCWGG | 1 cut(s) | 208 |
| BseCI | ATCGAT | 1 cut(s) | 138 |
| BseDI | CCNNGG | 3 cut(s) | 519, 562, 1170 |
| BseGI | GGATG | 2 cut(s) | 287, 1175 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 103 |
| BseMII | CTCAG | 2 cut(s) | 215, 428 |
| BseNI | ACTGG | 8 cut(s) | 456, 543, 583, 592, 659, 668, 787, 1026 |
| BseRI | GAGGAG | 2 cut(s) | 859, 1114 |
| BseX3I | CGGCCG | 1 cut(s) | 147 |
| BseXI | GCAGC | 2 cut(s) | 313, 1003 |
| BsgI | GTGCAG | 1 cut(s) | 780 |
| Bsh1236I | CGCG | 2 cut(s) | 89, 255 |
| Bsh1285I | CGRYCG | 1 cut(s) | 150 |
| BshFI | GGCC | 4 cut(s) | 149, 308, 524, 786 |
| BshVI | ATCGAT | 1 cut(s) | 138 |
| BsiEI | CGRYCG | 1 cut(s) | 150 |
| BsiHKAI | GWGCWC | 1 cut(s) | 604 |
| BsiSI | CCGG | 1 cut(s) | 1152 |
| BslFI | GGGAC | 2 cut(s) | 435, 606 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 103 |
| BsmAI | GTCTC | 3 cut(s) | 167, 417, 1142 |
| BsmBI | CGTCTC | 1 cut(s) | 417 |
| BsmFI | GGGAC | 2 cut(s) | 435, 606 |
| BsmI | GAATGC | 1 cut(s) | 34 |
| BsnI | GGCC | 4 cut(s) | 149, 308, 524, 786 |
| Bso31I | GGTCTC | 1 cut(s) | 1142 |
| Bsp1286I | GDGCHC | 1 cut(s) | 604 |
| Bsp143I | GATC | 6 cut(s) | 123, 188, 640, 955, 1066, 1192 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1163 |
| BspACI | CCGC | 3 cut(s) | 821, 939, 1076 |
| BspANI | GGCC | 4 cut(s) | 149, 308, 524, 786 |
| BspCNI | CTCAG | 2 cut(s) | 216, 427 |
| BspDI | ATCGAT | 1 cut(s) | 138 |
| BspFNI | CGCG | 2 cut(s) | 89, 255 |
| BspLI | GGNNCC | 1 cut(s) | 525 |
| BspMI | ACCTGC | 1 cut(s) | 377 |
| BspPI | GGATC | 2 cut(s) | 131, 1200 |
| BspQI | GCTCTTC | 1 cut(s) | 747 |
| BspTNI | GGTCTC | 1 cut(s) | 1142 |
| BsrI | ACTGG | 8 cut(s) | 456, 543, 583, 592, 659, 668, 787, 1026 |
| BssECI | CCNNGG | 3 cut(s) | 519, 562, 1170 |
| BssMI | GATC | 6 cut(s) | 123, 188, 640, 955, 1066, 1192 |
| BssNI | GRCGYC | 1 cut(s) | 5 |
| BssSI | CACGAG | 1 cut(s) | 321 |
| BssT1I | CCWWGG | 3 cut(s) | 519, 562, 1170 |
| Bst2BI | CACGAG | 1 cut(s) | 321 |
| Bst2UI | CCWGG | 1 cut(s) | 208 |
| Bst4CI | ACNGT | 2 cut(s) | 550, 1094 |
| Bst6I | CTCTTC | 1 cut(s) | 747 |
| BstACI | GRCGYC | 1 cut(s) | 5 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 141 |
| BstC8I | GCNNGC | 1 cut(s) | 604 |
| BstDEI | CTNAG | 4 cut(s) | 224, 414, 570, 1163 |
| BstEII | GGTNACC | 1 cut(s) | 1079 |
| BstF5I | GGATG | 2 cut(s) | 287, 1175 |
| BstFNI | CGCG | 2 cut(s) | 89, 255 |
| BstH2I | RGCGCY | 1 cut(s) | 774 |
| BstHHI | GCGC | 2 cut(s) | 257, 773 |
| BstKTI | GATC | 6 cut(s) | 126, 191, 643, 958, 1069, 1195 |
| BstMAI | GTCTC | 3 cut(s) | 167, 417, 1142 |
| BstMBI | GATC | 6 cut(s) | 123, 188, 640, 955, 1066, 1192 |
| BstMCI | CGRYCG | 1 cut(s) | 150 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 141, 165, 383 |
| BstNI | CCWGG | 1 cut(s) | 208 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 387 |
| BstPI | GGTNACC | 1 cut(s) | 1079 |
| BstSCI | CCNGG | 2 cut(s) | 206, 1151 |
| BstSFI | CTRYAG | 1 cut(s) | 480 |
| BstUI | CGCG | 2 cut(s) | 89, 255 |
| BstV1I | GCAGC | 2 cut(s) | 313, 1003 |
| BstV2I | GAAGAC | 2 cut(s) | 383, 387 |
| BstX2I | RGATCY | 3 cut(s) | 123, 188, 1192 |
| BstYI | RGATCY | 3 cut(s) | 123, 188, 1192 |
| BstZI | CGGCCG | 1 cut(s) | 147 |
| Bsu15I | ATCGAT | 1 cut(s) | 138 |
| BsuRI | GGCC | 4 cut(s) | 149, 308, 524, 786 |
| BsuTUI | ATCGAT | 1 cut(s) | 138 |
| BtgZI | GCGATG | 1 cut(s) | 140 |
| BtsCI | GGATG | 2 cut(s) | 287, 1175 |
| BtsIMutI | CAGTG | 2 cut(s) | 463, 1033 |
| BveI | ACCTGC | 1 cut(s) | 377 |
| Cac8I | GCNNGC | 1 cut(s) | 604 |
| CfoI | GCGC | 2 cut(s) | 257, 773 |
| Cfr13I | GGNCC | 1 cut(s) | 523 |
| ClaI | ATCGAT | 1 cut(s) | 138 |
| CseI | GACGC | 2 cut(s) | 392, 399 |
| Csp6I | GTAC | 1 cut(s) | 546 |
| CviAII | CATG | 4 cut(s) | 102, 278, 530, 788 |
| CviQI | GTAC | 1 cut(s) | 546 |
| DdeI | CTNAG | 4 cut(s) | 224, 414, 570, 1163 |
| DpnI | GATC | 6 cut(s) | 125, 190, 642, 957, 1068, 1194 |
| DpnII | GATC | 6 cut(s) | 123, 188, 640, 955, 1066, 1192 |
| DraI | TTTAAA | 1 cut(s) | 271 |
| EaeI | YGGCCR | 2 cut(s) | 147, 784 |
| EagI | CGGCCG | 1 cut(s) | 147 |
| Eam1104I | CTCTTC | 1 cut(s) | 747 |
| EarI | CTCTTC | 1 cut(s) | 747 |
| EclXI | CGGCCG | 1 cut(s) | 147 |
| Eco130I | CCWWGG | 3 cut(s) | 519, 562, 1170 |
| Eco31I | GGTCTC | 1 cut(s) | 1142 |
| Eco32I | GATATC | 3 cut(s) | 448, 1057, 1120 |
| Eco52I | CGGCCG | 1 cut(s) | 147 |
| Eco57I | CTGAAG | 4 cut(s) | 93, 522, 672, 1181 |
| Eco91I | GGTNACC | 1 cut(s) | 1079 |
| EcoO109I | RGGNCCY | 1 cut(s) | 523 |
| EcoO65I | GGTNACC | 1 cut(s) | 1079 |
| EcoRI | GAATTC | 1 cut(s) | 760 |
| EcoRII | CCWGG | 1 cut(s) | 206 |
| EcoRV | GATATC | 3 cut(s) | 448, 1057, 1120 |
| EcoT14I | CCWWGG | 3 cut(s) | 519, 562, 1170 |
| ErhI | CCWWGG | 3 cut(s) | 519, 562, 1170 |
| Esp3I | CGTCTC | 1 cut(s) | 417 |
| FaeI | CATG | 4 cut(s) | 105, 281, 533, 791 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 59, 91 |
| FaqI | GGGAC | 2 cut(s) | 435, 606 |
| FatI | CATG | 4 cut(s) | 101, 277, 529, 787 |
| FauI | CCCGC | 1 cut(s) | 1069 |
| FauNDI | CATATG | 1 cut(s) | 118 |
| FbaI | TGATCA | 2 cut(s) | 640, 955 |
| Fnu4HI | GCNGC | 2 cut(s) | 327, 1017 |
| FokI | GGATG | 2 cut(s) | 294, 1162 |
| Fsp4HI | GCNGC | 2 cut(s) | 327, 1017 |
| FspBI | CTAG | 2 cut(s) | 774, 858 |
| GlaI | GCGC | 2 cut(s) | 256, 772 |
| GluI | GCNGC | 2 cut(s) | 327, 1017 |
| GsuI | CTGGAG | 1 cut(s) | 1009 |
| HaeII | RGCGCY | 1 cut(s) | 774 |
| HaeIII | GGCC | 4 cut(s) | 149, 308, 524, 786 |
| HapII | CCGG | 1 cut(s) | 1152 |
| HgaI | GACGC | 2 cut(s) | 392, 399 |
| HhaI | GCGC | 2 cut(s) | 257, 773 |
| Hin1I | GRCGYC | 1 cut(s) | 5 |
| Hin1II | CATG | 4 cut(s) | 105, 281, 533, 791 |
| Hin6I | GCGC | 2 cut(s) | 255, 771 |
| HinP1I | GCGC | 2 cut(s) | 255, 771 |
| HindIII | AAGCTT | 1 cut(s) | 1160 |
| HinfI | GANTC | 4 cut(s) | 203, 211, 512, 1206 |
| HpaII | CCGG | 1 cut(s) | 1152 |
| HphI | GGTGA | 4 cut(s) | 393, 965, 1055, 1091 |
| Hpy166II | GTNNAC | 1 cut(s) | 172 |
| Hpy188I | TCNGA | 5 cut(s) | 10, 61, 511, 645, 1214 |
| Hpy8I | GTNNAC | 1 cut(s) | 172 |
| HpyCH4III | ACNGT | 2 cut(s) | 550, 1094 |
| HpyCH4IV | ACGT | 1 cut(s) | 975 |
| HpyCH4V | TGCA | 6 cut(s) | 135, 797, 880, 923, 997, 1142 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 141, 165, 383 |
| HpyF3I | CTNAG | 4 cut(s) | 224, 414, 570, 1163 |
| HpySE526I | ACGT | 1 cut(s) | 975 |
| Hsp92I | GRCGYC | 1 cut(s) | 5 |
| Hsp92II | CATG | 4 cut(s) | 105, 281, 533, 791 |
| HspAI | GCGC | 2 cut(s) | 255, 771 |
| Ksp22I | TGATCA | 2 cut(s) | 640, 955 |
| Kzo9I | GATC | 6 cut(s) | 123, 188, 640, 955, 1066, 1192 |
| LguI | GCTCTTC | 1 cut(s) | 747 |
| LmnI | GCTCC | 1 cut(s) | 1172 |
| Lsp1109I | GCAGC | 2 cut(s) | 313, 1003 |
| LweI | GCATC | 4 cut(s) | 144, 437, 970, 1184 |
| MaeI | CTAG | 2 cut(s) | 774, 858 |
| MaeII | ACGT | 1 cut(s) | 975 |
| MaeIII | GTNAC | 7 cut(s) | 83, 112, 538, 703, 778, 1043, 1079 |
| MalI | GATC | 6 cut(s) | 125, 190, 642, 957, 1068, 1194 |
| MboI | GATC | 6 cut(s) | 123, 188, 640, 955, 1066, 1192 |
| MflI | RGATCY | 3 cut(s) | 123, 188, 1192 |
| MhlI | GDGCHC | 1 cut(s) | 604 |
| MlsI | TGGCCA | 1 cut(s) | 786 |
| MluCI | AATT | 7 cut(s) | 196, 300, 760, 882, 911, 944, 1180 |
| MluNI | TGGCCA | 1 cut(s) | 786 |
| MlyI | GAGTC | 2 cut(s) | 197, 205 |
| MmeI | TCCRAC | 1 cut(s) | 39 |
| MnlI | CCTC | 8 cut(s) | 287, 298, 688, 880, 892, 1000, 1071, 1135 |
| Mox20I | TGGCCA | 1 cut(s) | 786 |
| MroXI | GAANNNNTTC | 3 cut(s) | 741, 859, 911 |
| MscI | TGGCCA | 1 cut(s) | 786 |
| MseI | TTAA | 3 cut(s) | 270, 1089, 1184 |
| Msp20I | TGGCCA | 1 cut(s) | 786 |
| MspA1I | CMGCKG | 2 cut(s) | 223, 701 |
| MspI | CCGG | 1 cut(s) | 1152 |
| MspR9I | CCNGG | 2 cut(s) | 208, 1153 |
| Mva1269I | GAATGC | 1 cut(s) | 34 |
| MvaI | CCWGG | 1 cut(s) | 208 |
| MvnI | CGCG | 2 cut(s) | 89, 255 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 141, 165, 383 |
| NciI | CCSGG | 1 cut(s) | 1153 |
| NdeI | CATATG | 1 cut(s) | 118 |
| NdeII | GATC | 6 cut(s) | 123, 188, 640, 955, 1066, 1192 |
| NlaIII | CATG | 4 cut(s) | 105, 281, 533, 791 |
| NlaIV | GGNNCC | 1 cut(s) | 525 |
| NmeAIII | GCCGAG | 3 cut(s) | 125, 144, 355 |
| NmuCI | GTSAC | 3 cut(s) | 703, 1043, 1079 |
| PciSI | GCTCTTC | 1 cut(s) | 747 |
| PctI | GAATGC | 1 cut(s) | 34 |
| PdmI | GAANNNNTTC | 3 cut(s) | 741, 859, 911 |
| PfeI | GAWTC | 2 cut(s) | 512, 1206 |
| PfoI | TCCNGGA | 1 cut(s) | 206 |
| PkrI | GCNGC | 2 cut(s) | 328, 1018 |
| PleI | GAGTC | 2 cut(s) | 197, 205 |
| PpsI | GAGTC | 2 cut(s) | 197, 205 |
| PshAI | GACNNNNGTC | 1 cut(s) | 387 |
| Psp6I | CCWGG | 1 cut(s) | 206 |
| PspEI | GGTNACC | 1 cut(s) | 1079 |
| PspGI | CCWGG | 1 cut(s) | 206 |
| PspN4I | GGNNCC | 1 cut(s) | 525 |
| PspPI | GGNCC | 1 cut(s) | 523 |
| PsuI | RGATCY | 3 cut(s) | 123, 188, 1192 |
| PvuII | CAGCTG | 2 cut(s) | 223, 701 |
| RsaI | GTAC | 1 cut(s) | 547 |
| RsaNI | GTAC | 1 cut(s) | 546 |
| SapI | GCTCTTC | 1 cut(s) | 747 |
| SaqAI | TTAA | 3 cut(s) | 270, 1089, 1184 |
| SatI | GCNGC | 2 cut(s) | 327, 1017 |
| Sau3AI | GATC | 6 cut(s) | 123, 188, 640, 955, 1066, 1192 |
| Sau96I | GGNCC | 1 cut(s) | 523 |
| SchI | GAGTC | 2 cut(s) | 197, 205 |
| ScrFI | CCNGG | 2 cut(s) | 208, 1153 |
| SduI | GDGCHC | 1 cut(s) | 604 |
| SfaNI | GCATC | 4 cut(s) | 144, 437, 970, 1184 |
| SfcI | CTRYAG | 1 cut(s) | 480 |
| SmlI | CTYRAG | 1 cut(s) | 984 |
| SmoI | CTYRAG | 1 cut(s) | 984 |
| SpeI | ACTAGT | 1 cut(s) | 857 |
| Sse9I | AATT | 7 cut(s) | 196, 300, 760, 882, 911, 944, 1180 |
| SsiI | CCGC | 3 cut(s) | 821, 939, 1076 |
| SspI | AATATT | 1 cut(s) | 1138 |
| SspMI | CTAG | 2 cut(s) | 774, 858 |
| StyD4I | CCNGG | 2 cut(s) | 206, 1151 |
| StyI | CCWWGG | 3 cut(s) | 519, 562, 1170 |
| TaaI | ACNGT | 2 cut(s) | 550, 1094 |
| TaiI | ACGT | 1 cut(s) | 978 |
| TaqI | TCGA | 5 cut(s) | 53, 78, 138, 721, 809 |
| TasI | AATT | 7 cut(s) | 196, 300, 760, 882, 911, 944, 1180 |
| TfiI | GAWTC | 2 cut(s) | 512, 1206 |
| Tru1I | TTAA | 3 cut(s) | 270, 1089, 1184 |
| Tru9I | TTAA | 3 cut(s) | 270, 1089, 1184 |
| TscAI | CASTG | 2 cut(s) | 463, 1033 |
| TseFI | GTSAC | 3 cut(s) | 703, 1043, 1079 |
| TseI | GCWGC | 2 cut(s) | 326, 1016 |
| Tsp45I | GTSAC | 3 cut(s) | 703, 1043, 1079 |
| TspDTI | ATGAA | 2 cut(s) | 642, 773 |
| TspGWI | ACGGA | 1 cut(s) | 1205 |
| TspRI | CASTG | 2 cut(s) | 463, 1033 |
| XapI | RAATTY | 4 cut(s) | 196, 760, 882, 911 |
| XmnI | GAANNNNTTC | 3 cut(s) | 741, 859, 911 |
| XspI | CTAG | 2 cut(s) | 774, 858 |