B3 domain-containing
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 476 |
| AccI | GTMKAC | 1 cut(s) | 204 |
| AciI | CCGC | 1 cut(s) | 1266 |
| AclWI | GGATC | 2 cut(s) | 834, 1064 |
| AcoI | YGGCCR | 1 cut(s) | 32 |
| AcsI | RAATTY | 5 cut(s) | 122, 313, 320, 796, 896 |
| AcuI | CTGAAG | 1 cut(s) | 656 |
| AfaI | GTAC | 3 cut(s) | 749, 1162, 1339 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 653, 1023, 1265 |
| AflII | CTTAAG | 1 cut(s) | 1397 |
| AjnI | CCWGG | 1 cut(s) | 273 |
| AleI | CACNNNNGTG | 1 cut(s) | 619 |
| AluBI | AGCT | 6 cut(s) | 172, 668, 680, 872, 1004, 1280 |
| AluI | AGCT | 6 cut(s) | 172, 668, 680, 872, 1004, 1280 |
| Alw21I | GWGCWC | 1 cut(s) | 874 |
| AlwI | GGATC | 2 cut(s) | 834, 1064 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1040 |
| Ama87I | CYCGRG | 2 cut(s) | 617, 1084 |
| AoxI | GGCC | 2 cut(s) | 32, 839 |
| ApeKI | GCWGC | 1 cut(s) | 1004 |
| ApoI | RAATTY | 5 cut(s) | 122, 313, 320, 796, 896 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 187 |
| AspS9I | GGNCC | 1 cut(s) | 638 |
| AsuC2I | CCSGG | 2 cut(s) | 618, 619 |
| AsuHPI | GGTGA | 5 cut(s) | 236, 815, 1100, 1112, 1346 |
| AsuII | TTCGAA | 1 cut(s) | 603 |
| AvaI | CYCGRG | 2 cut(s) | 617, 1084 |
| AvaII | GGWCC | 1 cut(s) | 638 |
| BalI | TGGCCA | 1 cut(s) | 34 |
| BanII | GRGCYC | 1 cut(s) | 874 |
| Bbv12I | GWGCWC | 1 cut(s) | 874 |
| BbvCI | CCTCAGC | 1 cut(s) | 1209 |
| BbvI | GCAGC | 1 cut(s) | 991 |
| BccI | CCATC | 6 cut(s) | 215, 379, 772, 886, 1359, 1381 |
| BciT130I | CCWGG | 1 cut(s) | 275 |
| BcnI | CCSGG | 2 cut(s) | 618, 619 |
| BfaI | CTAG | 3 cut(s) | 293, 429, 1074 |
| BfmI | CTRYAG | 2 cut(s) | 441, 1275 |
| BfrI | CTTAAG | 1 cut(s) | 1397 |
| BfuAI | ACCTGC | 1 cut(s) | 476 |
| BisI | GCNGC | 1 cut(s) | 1005 |
| BlsI | GCNGC | 1 cut(s) | 1006 |
| Bme1390I | CCNGG | 3 cut(s) | 275, 618, 619 |
| Bme18I | GGWCC | 1 cut(s) | 638 |
| BmeT110I | CYCGRG | 2 cut(s) | 617, 1084 |
| BmgT120I | GGNCC | 1 cut(s) | 638 |
| BmrFI | CCNGG | 3 cut(s) | 275, 618, 619 |
| BmsI | GCATC | 2 cut(s) | 1093, 1285 |
| BoxI | GACNNNNGTC | 1 cut(s) | 282 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 254, 286 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1209 |
| Bpu14I | TTCGAA | 1 cut(s) | 603 |
| BpuEI | CTTGAG | 1 cut(s) | 188 |
| BpuMI | CCSGG | 2 cut(s) | 618, 619 |
| BsaBI | GATNNNNATC | 2 cut(s) | 555, 1068 |
| BsaJI | CCNNGG | 2 cut(s) | 273, 617 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 622, 652 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 653, 1023, 1265 |
| Bse1I | ACTGG | 6 cut(s) | 35, 93, 158, 293, 1233, 1341 |
| Bse3DI | GCAATG | 2 cut(s) | 497, 641 |
| Bse8I | GATNNNNATC | 2 cut(s) | 555, 1068 |
| BseBI | CCWGG | 1 cut(s) | 275 |
| BseDI | CCNNGG | 2 cut(s) | 273, 617 |
| BseGI | GGATG | 5 cut(s) | 148, 226, 764, 897, 1373 |
| BseJI | GATNNNNATC | 2 cut(s) | 555, 1068 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 653, 1023, 1265 |
| BseMI | GCAATG | 2 cut(s) | 497, 641 |
| BseMII | CTCAG | 5 cut(s) | 223, 252, 530, 1032, 1223 |
| BseNI | ACTGG | 6 cut(s) | 35, 93, 158, 293, 1233, 1341 |
| BseRI | GAGGAG | 1 cut(s) | 876 |
| BseXI | GCAGC | 1 cut(s) | 991 |
| BshFI | GGCC | 2 cut(s) | 34, 841 |
| BsiHKAI | GWGCWC | 1 cut(s) | 874 |
| BsiHKCI | CYCGRG | 2 cut(s) | 617, 1084 |
| BsiSI | CCGG | 1 cut(s) | 618 |
| BslFI | GGGAC | 1 cut(s) | 492 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 653, 1023, 1265 |
| BsmFI | GGGAC | 1 cut(s) | 492 |
| BsnI | GGCC | 2 cut(s) | 34, 841 |
| BsoBI | CYCGRG | 2 cut(s) | 617, 1084 |
| Bsp119I | TTCGAA | 1 cut(s) | 603 |
| Bsp1286I | GDGCHC | 1 cut(s) | 874 |
| Bsp1407I | TGTACA | 1 cut(s) | 1160 |
| Bsp143I | GATC | 4 cut(s) | 69, 145, 826, 1069 |
| BspACI | CCGC | 1 cut(s) | 1266 |
| BspANI | GGCC | 2 cut(s) | 34, 841 |
| BspCNI | CTCAG | 5 cut(s) | 222, 253, 529, 1033, 1222 |
| BspHI | TCATGA | 1 cut(s) | 418 |
| BspMI | ACCTGC | 1 cut(s) | 476 |
| BspPI | GGATC | 2 cut(s) | 834, 1064 |
| BspQI | GCTCTTC | 3 cut(s) | 675, 862, 1287 |
| BspT104I | TTCGAA | 1 cut(s) | 603 |
| BspTI | CTTAAG | 1 cut(s) | 1397 |
| BsrDI | GCAATG | 2 cut(s) | 497, 641 |
| BsrGI | TGTACA | 1 cut(s) | 1160 |
| BsrI | ACTGG | 6 cut(s) | 35, 93, 158, 293, 1233, 1341 |
| BssECI | CCNNGG | 2 cut(s) | 273, 617 |
| BssMI | GATC | 4 cut(s) | 69, 145, 826, 1069 |
| Bst2UI | CCWGG | 1 cut(s) | 275 |
| Bst4CI | ACNGT | 2 cut(s) | 1036, 1358 |
| Bst6I | CTCTTC | 4 cut(s) | 417, 675, 862, 1287 |
| BstAFI | CTTAAG | 1 cut(s) | 1397 |
| BstAUI | TGTACA | 1 cut(s) | 1160 |
| BstBI | TTCGAA | 1 cut(s) | 603 |
| BstC8I | GCNNGC | 1 cut(s) | 1264 |
| BstDEI | CTNAG | 6 cut(s) | 107, 209, 261, 516, 1041, 1209 |
| BstF5I | GGATG | 5 cut(s) | 148, 226, 764, 897, 1373 |
| BstKTI | GATC | 4 cut(s) | 72, 148, 829, 1072 |
| BstMBI | GATC | 4 cut(s) | 69, 145, 826, 1069 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 579, 588 |
| BstNI | CCWGG | 1 cut(s) | 275 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 282 |
| BstSCI | CCNGG | 3 cut(s) | 273, 616, 617 |
| BstSFI | CTRYAG | 2 cut(s) | 441, 1275 |
| BstV1I | GCAGC | 1 cut(s) | 991 |
| BsuRI | GGCC | 2 cut(s) | 34, 841 |
| BtsCI | GGATG | 5 cut(s) | 148, 226, 764, 897, 1373 |
| BtsI | GCAGTG | 1 cut(s) | 580 |
| BtsIMutI | CAGTG | 4 cut(s) | 100, 286, 580, 1041 |
| BveI | ACCTGC | 1 cut(s) | 476 |
| Cac8I | GCNNGC | 1 cut(s) | 1264 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1040 |
| CciI | TCATGA | 1 cut(s) | 418 |
| Cfr13I | GGNCC | 1 cut(s) | 638 |
| Cfr9I | CCCGGG | 1 cut(s) | 617 |
| CseI | GACGC | 1 cut(s) | 107 |
| Csp6I | GTAC | 3 cut(s) | 748, 1161, 1338 |
| CviAII | CATG | 5 cut(s) | 195, 326, 419, 724, 1203 |
| CviQI | GTAC | 3 cut(s) | 748, 1161, 1338 |
| DdeI | CTNAG | 6 cut(s) | 107, 209, 261, 516, 1041, 1209 |
| DpnI | GATC | 4 cut(s) | 71, 147, 828, 1071 |
| DpnII | GATC | 4 cut(s) | 69, 145, 826, 1069 |
| EaeI | YGGCCR | 1 cut(s) | 32 |
| Eam1104I | CTCTTC | 4 cut(s) | 417, 675, 862, 1287 |
| EarI | CTCTTC | 4 cut(s) | 417, 675, 862, 1287 |
| Ecl136II | GAGCTC | 1 cut(s) | 872 |
| Eco24I | GRGCYC | 1 cut(s) | 874 |
| Eco32I | GATATC | 1 cut(s) | 305 |
| Eco47I | GGWCC | 1 cut(s) | 638 |
| Eco53kI | GAGCTC | 1 cut(s) | 872 |
| Eco57I | CTGAAG | 1 cut(s) | 656 |
| Eco88I | CYCGRG | 2 cut(s) | 617, 1084 |
| EcoICRI | GAGCTC | 1 cut(s) | 872 |
| EcoRI | GAATTC | 2 cut(s) | 313, 796 |
| EcoRII | CCWGG | 1 cut(s) | 273 |
| EcoRV | GATATC | 1 cut(s) | 305 |
| EcoT38I | GRGCYC | 1 cut(s) | 874 |
| FaeI | CATG | 5 cut(s) | 198, 329, 422, 727, 1206 |
| FaqI | GGGAC | 1 cut(s) | 492 |
| FatI | CATG | 5 cut(s) | 194, 325, 418, 723, 1202 |
| FblI | GTMKAC | 1 cut(s) | 204 |
| Fnu4HI | GCNGC | 1 cut(s) | 1005 |
| FokI | GGATG | 5 cut(s) | 155, 233, 751, 904, 1360 |
| FriOI | GRGCYC | 1 cut(s) | 874 |
| Fsp4HI | GCNGC | 1 cut(s) | 1005 |
| FspBI | CTAG | 3 cut(s) | 293, 429, 1074 |
| GluI | GCNGC | 1 cut(s) | 1005 |
| HaeIII | GGCC | 2 cut(s) | 34, 841 |
| HapII | CCGG | 1 cut(s) | 618 |
| HgaI | GACGC | 1 cut(s) | 107 |
| Hin1II | CATG | 5 cut(s) | 198, 329, 422, 727, 1206 |
| HincII | GTYRAC | 1 cut(s) | 361 |
| HindII | GTYRAC | 1 cut(s) | 361 |
| HinfI | GANTC | 9 cut(s) | 112, 425, 437, 461, 600, 1082, 1094, 1124, 1136 |
| HpaII | CCGG | 1 cut(s) | 618 |
| HphI | GGTGA | 5 cut(s) | 236, 815, 1100, 1112, 1346 |
| Hpy166II | GTNNAC | 3 cut(s) | 205, 361, 1163 |
| Hpy188I | TCNGA | 9 cut(s) | 212, 262, 519, 675, 769, 831, 1120, 1129, 1309 |
| Hpy188III | TCNNGA | 4 cut(s) | 67, 167, 419, 540 |
| Hpy8I | GTNNAC | 3 cut(s) | 205, 361, 1163 |
| HpyAV | CCTTC | 1 cut(s) | 824 |
| HpyCH4III | ACNGT | 2 cut(s) | 1036, 1358 |
| HpyCH4IV | ACGT | 1 cut(s) | 1379 |
| HpyCH4V | TGCA | 4 cut(s) | 333, 351, 1007, 1262 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 579, 588 |
| HpyF3I | CTNAG | 6 cut(s) | 107, 209, 261, 516, 1041, 1209 |
| HpySE526I | ACGT | 1 cut(s) | 1379 |
| Hsp92II | CATG | 5 cut(s) | 198, 329, 422, 727, 1206 |
| Kzo9I | GATC | 4 cut(s) | 69, 145, 826, 1069 |
| LguI | GCTCTTC | 3 cut(s) | 675, 862, 1287 |
| Lsp1109I | GCAGC | 1 cut(s) | 991 |
| LweI | GCATC | 2 cut(s) | 1093, 1285 |
| MaeI | CTAG | 3 cut(s) | 293, 429, 1074 |
| MaeII | ACGT | 1 cut(s) | 1379 |
| MaeIII | GTNAC | 2 cut(s) | 95, 284 |
| MalI | GATC | 4 cut(s) | 71, 147, 828, 1071 |
| MboI | GATC | 4 cut(s) | 69, 145, 826, 1069 |
| MhlI | GDGCHC | 1 cut(s) | 874 |
| MlsI | TGGCCA | 1 cut(s) | 34 |
| MluNI | TGGCCA | 1 cut(s) | 34 |
| MlyI | GAGTC | 3 cut(s) | 434, 1076, 1103 |
| MmeI | TCCRAC | 1 cut(s) | 869 |
| Mox20I | TGGCCA | 1 cut(s) | 34 |
| MroXI | GAANNNNTTC | 1 cut(s) | 187 |
| MscI | TGGCCA | 1 cut(s) | 34 |
| MseI | TTAA | 6 cut(s) | 792, 846, 924, 963, 1386, 1398 |
| MslI | CAYNNNNRTG | 1 cut(s) | 619 |
| Msp20I | TGGCCA | 1 cut(s) | 34 |
| MspCI | CTTAAG | 1 cut(s) | 1397 |
| MspI | CCGG | 1 cut(s) | 618 |
| MspR9I | CCNGG | 3 cut(s) | 275, 618, 619 |
| MvaI | CCWGG | 1 cut(s) | 275 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 579, 588 |
| NciI | CCSGG | 2 cut(s) | 618, 619 |
| NdeII | GATC | 4 cut(s) | 69, 145, 826, 1069 |
| NlaIII | CATG | 5 cut(s) | 198, 329, 422, 727, 1206 |
| NmuCI | GTSAC | 2 cut(s) | 95, 284 |
| NspV | TTCGAA | 1 cut(s) | 603 |
| OliI | CACNNNNGTG | 1 cut(s) | 619 |
| PagI | TCATGA | 1 cut(s) | 418 |
| PciSI | GCTCTTC | 3 cut(s) | 675, 862, 1287 |
| PdmI | GAANNNNTTC | 1 cut(s) | 187 |
| PfeI | GAWTC | 6 cut(s) | 112, 437, 461, 600, 1124, 1136 |
| PkrI | GCNGC | 1 cut(s) | 1006 |
| PleI | GAGTC | 3 cut(s) | 433, 1076, 1102 |
| PpsI | GAGTC | 3 cut(s) | 433, 1076, 1102 |
| PshAI | GACNNNNGTC | 1 cut(s) | 282 |
| Psp124BI | GAGCTC | 1 cut(s) | 874 |
| Psp6I | CCWGG | 1 cut(s) | 273 |
| PspGI | CCWGG | 1 cut(s) | 273 |
| PspPI | GGNCC | 1 cut(s) | 638 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1040 |
| RsaI | GTAC | 3 cut(s) | 749, 1162, 1339 |
| RsaNI | GTAC | 3 cut(s) | 748, 1161, 1338 |
| RseI | CAYNNNNRTG | 1 cut(s) | 619 |
| SacI | GAGCTC | 1 cut(s) | 874 |
| SapI | GCTCTTC | 3 cut(s) | 675, 862, 1287 |
| SaqAI | TTAA | 6 cut(s) | 792, 846, 924, 963, 1386, 1398 |
| SatI | GCNGC | 1 cut(s) | 1005 |
| Sau3AI | GATC | 4 cut(s) | 69, 145, 826, 1069 |
| Sau96I | GGNCC | 1 cut(s) | 638 |
| SchI | GAGTC | 3 cut(s) | 434, 1076, 1103 |
| ScrFI | CCNGG | 3 cut(s) | 275, 618, 619 |
| SduI | GDGCHC | 1 cut(s) | 874 |
| SfaNI | GCATC | 2 cut(s) | 1093, 1285 |
| SfcI | CTRYAG | 2 cut(s) | 441, 1275 |
| SfuI | TTCGAA | 1 cut(s) | 603 |
| SinI | GGWCC | 1 cut(s) | 638 |
| SmaI | CCCGGG | 1 cut(s) | 619 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 619 |
| SmlI | CTYRAG | 2 cut(s) | 167, 1397 |
| SmoI | CTYRAG | 2 cut(s) | 167, 1397 |
| SsiI | CCGC | 1 cut(s) | 1266 |
| SspMI | CTAG | 3 cut(s) | 293, 429, 1074 |
| SstI | GAGCTC | 1 cut(s) | 874 |
| StyD4I | CCNGG | 3 cut(s) | 273, 616, 617 |
| TaaI | ACNGT | 2 cut(s) | 1036, 1358 |
| TaiI | ACGT | 1 cut(s) | 1382 |
| TaqI | TCGA | 3 cut(s) | 595, 603, 817 |
| TaqII | GACCGA | 1 cut(s) | 626 |
| TatI | WGTACW | 1 cut(s) | 1160 |
| TfiI | GAWTC | 6 cut(s) | 112, 437, 461, 600, 1124, 1136 |
| Tru1I | TTAA | 6 cut(s) | 792, 846, 924, 963, 1386, 1398 |
| Tru9I | TTAA | 6 cut(s) | 792, 846, 924, 963, 1386, 1398 |
| TscAI | CASTG | 4 cut(s) | 100, 293, 580, 1041 |
| TseFI | GTSAC | 2 cut(s) | 95, 284 |
| TseI | GCWGC | 1 cut(s) | 1004 |
| Tsp45I | GTSAC | 2 cut(s) | 95, 284 |
| TspDTI | ATGAA | 7 cut(s) | 146, 407, 435, 486, 740, 1074, 1379 |
| TspMI | CCCGGG | 1 cut(s) | 617 |
| TspRI | CASTG | 4 cut(s) | 100, 293, 580, 1041 |
| Vha464I | CTTAAG | 1 cut(s) | 1397 |
| VpaK11BI | GGWCC | 1 cut(s) | 638 |
| XapI | RAATTY | 5 cut(s) | 122, 313, 320, 796, 896 |
| XmaI | CCCGGG | 1 cut(s) | 617 |
| XmiI | GTMKAC | 1 cut(s) | 204 |
| XmnI | GAANNNNTTC | 1 cut(s) | 187 |
| XspI | CTAG | 3 cut(s) | 293, 429, 1074 |